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A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
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Results for UGCAGUC
Z-value: 0.22
Motif logo
miRNA associated with seed UGCAGUC
| Name | miRBASE accession |
|---|---|
|
hsa-miR-455-3p.2
|
Activity profile of UGCAGUC motif
Sorted Z-values of UGCAGUC motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr3_+_93781728 | 0.11 |
ENST00000314622.4
|
NSUN3
|
NOP2/Sun domain family, member 3 |
| chr1_-_70671216 | 0.09 |
ENST00000370952.3
|
LRRC40
|
leucine rich repeat containing 40 |
| chr3_+_88188254 | 0.07 |
ENST00000309495.5
|
ZNF654
|
zinc finger protein 654 |
| chr15_+_63481668 | 0.07 |
ENST00000321437.4
ENST00000559006.1 ENST00000448330.2 |
RAB8B
|
RAB8B, member RAS oncogene family |
| chr10_+_112679301 | 0.07 |
ENST00000265277.5
ENST00000369452.4 |
SHOC2
|
soc-2 suppressor of clear homolog (C. elegans) |
| chr4_+_141294628 | 0.06 |
ENST00000512749.1
ENST00000608372.1 ENST00000506597.1 ENST00000394201.4 ENST00000510586.1 |
SCOC
|
short coiled-coil protein |
| chr7_+_94139105 | 0.06 |
ENST00000297273.4
|
CASD1
|
CAS1 domain containing 1 |
| chr6_+_142468361 | 0.06 |
ENST00000367630.4
|
VTA1
|
vesicle (multivesicular body) trafficking 1 |
| chr5_+_122110691 | 0.06 |
ENST00000379516.2
ENST00000505934.1 ENST00000514949.1 |
SNX2
|
sorting nexin 2 |
| chr2_+_118846008 | 0.05 |
ENST00000245787.4
|
INSIG2
|
insulin induced gene 2 |
| chr4_-_76598296 | 0.05 |
ENST00000395719.3
|
G3BP2
|
GTPase activating protein (SH3 domain) binding protein 2 |
| chr2_+_46926048 | 0.05 |
ENST00000306503.5
|
SOCS5
|
suppressor of cytokine signaling 5 |
| chr15_+_66161871 | 0.05 |
ENST00000569896.1
|
RAB11A
|
RAB11A, member RAS oncogene family |
| chr2_-_148778258 | 0.04 |
ENST00000392857.5
ENST00000457954.1 ENST00000392858.1 ENST00000542387.1 |
ORC4
|
origin recognition complex, subunit 4 |
| chr2_-_11484710 | 0.04 |
ENST00000315872.6
|
ROCK2
|
Rho-associated, coiled-coil containing protein kinase 2 |
| chr5_+_127419449 | 0.04 |
ENST00000262461.2
ENST00000343225.4 |
SLC12A2
|
solute carrier family 12 (sodium/potassium/chloride transporter), member 2 |
| chr3_+_196295482 | 0.04 |
ENST00000440469.1
ENST00000311630.6 |
FBXO45
|
F-box protein 45 |
| chr4_-_129208940 | 0.04 |
ENST00000296425.5
|
PGRMC2
|
progesterone receptor membrane component 2 |
| chr12_+_62654119 | 0.04 |
ENST00000353364.3
ENST00000549523.1 ENST00000280377.5 |
USP15
|
ubiquitin specific peptidase 15 |
| chr21_+_17102311 | 0.04 |
ENST00000285679.6
ENST00000351097.5 ENST00000285681.2 ENST00000400183.2 |
USP25
|
ubiquitin specific peptidase 25 |
| chr2_-_190445499 | 0.04 |
ENST00000261024.2
|
SLC40A1
|
solute carrier family 40 (iron-regulated transporter), member 1 |
| chr10_-_5855350 | 0.04 |
ENST00000456041.1
ENST00000380181.3 ENST00000418688.1 ENST00000380132.4 ENST00000609712.1 ENST00000380191.4 |
GDI2
|
GDP dissociation inhibitor 2 |
| chr3_-_185542817 | 0.04 |
ENST00000382199.2
|
IGF2BP2
|
insulin-like growth factor 2 mRNA binding protein 2 |
| chr15_-_83316254 | 0.04 |
ENST00000567678.1
ENST00000450751.2 |
CPEB1
|
cytoplasmic polyadenylation element binding protein 1 |
| chr4_-_99851766 | 0.03 |
ENST00000450253.2
|
EIF4E
|
eukaryotic translation initiation factor 4E |
| chr14_-_35182994 | 0.03 |
ENST00000341223.3
|
CFL2
|
cofilin 2 (muscle) |
| chr2_+_48010221 | 0.03 |
ENST00000234420.5
|
MSH6
|
mutS homolog 6 |
| chr2_+_28974668 | 0.03 |
ENST00000296122.6
ENST00000395366.2 |
PPP1CB
|
protein phosphatase 1, catalytic subunit, beta isozyme |
| chr20_+_56884752 | 0.03 |
ENST00000244040.3
|
RAB22A
|
RAB22A, member RAS oncogene family |
| chr4_-_819901 | 0.03 |
ENST00000304062.6
|
CPLX1
|
complexin 1 |
| chr10_-_60027642 | 0.03 |
ENST00000373935.3
|
IPMK
|
inositol polyphosphate multikinase |
| chr3_-_122233723 | 0.03 |
ENST00000493510.1
ENST00000344337.6 ENST00000476916.1 ENST00000465882.1 |
KPNA1
|
karyopherin alpha 1 (importin alpha 5) |
| chr1_+_28052456 | 0.03 |
ENST00000373954.6
ENST00000419687.2 |
FAM76A
|
family with sequence similarity 76, member A |
| chr13_-_50367057 | 0.03 |
ENST00000261667.3
|
KPNA3
|
karyopherin alpha 3 (importin alpha 4) |
| chr2_-_154335300 | 0.03 |
ENST00000325926.3
|
RPRM
|
reprimo, TP53 dependent G2 arrest mediator candidate |
| chr6_+_4021554 | 0.03 |
ENST00000337659.6
|
PRPF4B
|
pre-mRNA processing factor 4B |
| chr18_+_63418068 | 0.03 |
ENST00000397968.2
|
CDH7
|
cadherin 7, type 2 |
| chr10_+_88516396 | 0.03 |
ENST00000372037.3
|
BMPR1A
|
bone morphogenetic protein receptor, type IA |
| chr5_+_36876833 | 0.02 |
ENST00000282516.8
ENST00000448238.2 |
NIPBL
|
Nipped-B homolog (Drosophila) |
| chr8_-_68255912 | 0.02 |
ENST00000262215.3
ENST00000519436.1 |
ARFGEF1
|
ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) |
| chr3_-_123304017 | 0.02 |
ENST00000383657.5
|
PTPLB
|
protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b |
| chr11_-_134281812 | 0.02 |
ENST00000392580.1
ENST00000312527.4 |
B3GAT1
|
beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) |
| chr3_+_137906109 | 0.02 |
ENST00000481646.1
ENST00000469044.1 ENST00000491704.1 ENST00000461600.1 |
ARMC8
|
armadillo repeat containing 8 |
| chr15_+_33603147 | 0.02 |
ENST00000415757.3
ENST00000389232.4 |
RYR3
|
ryanodine receptor 3 |
| chr1_-_23670817 | 0.02 |
ENST00000478691.1
|
HNRNPR
|
heterogeneous nuclear ribonucleoprotein R |
| chr10_-_75255724 | 0.02 |
ENST00000342558.3
ENST00000360663.5 ENST00000394829.2 ENST00000394828.2 ENST00000394822.2 |
PPP3CB
|
protein phosphatase 3, catalytic subunit, beta isozyme |
| chr5_-_32444828 | 0.02 |
ENST00000265069.8
|
ZFR
|
zinc finger RNA binding protein |
| chr5_-_81046922 | 0.02 |
ENST00000514493.1
ENST00000320672.4 |
SSBP2
|
single-stranded DNA binding protein 2 |
| chr10_+_98592009 | 0.02 |
ENST00000540664.1
ENST00000371103.3 |
LCOR
|
ligand dependent nuclear receptor corepressor |
| chr12_+_120933904 | 0.02 |
ENST00000550178.1
ENST00000550845.1 ENST00000549989.1 ENST00000552870.1 |
DYNLL1
|
dynein, light chain, LC8-type 1 |
| chr3_+_178866199 | 0.02 |
ENST00000263967.3
|
PIK3CA
|
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha |
| chr20_-_14318248 | 0.02 |
ENST00000378053.3
ENST00000341420.4 |
FLRT3
|
fibronectin leucine rich transmembrane protein 3 |
| chr7_-_32931387 | 0.02 |
ENST00000304056.4
|
KBTBD2
|
kelch repeat and BTB (POZ) domain containing 2 |
| chr5_+_56205081 | 0.02 |
ENST00000285947.2
ENST00000541720.1 |
SETD9
|
SET domain containing 9 |
| chr14_-_55878538 | 0.02 |
ENST00000247178.5
|
ATG14
|
autophagy related 14 |
| chr16_+_9185450 | 0.01 |
ENST00000327827.7
|
C16orf72
|
chromosome 16 open reading frame 72 |
| chr1_+_39456895 | 0.01 |
ENST00000432648.3
ENST00000446189.2 ENST00000372984.4 |
AKIRIN1
|
akirin 1 |
| chr9_+_15553055 | 0.01 |
ENST00000380701.3
|
CCDC171
|
coiled-coil domain containing 171 |
| chr15_+_49170083 | 0.01 |
ENST00000530028.2
|
EID1
|
EP300 interacting inhibitor of differentiation 1 |
| chr6_+_118228657 | 0.01 |
ENST00000360388.4
|
SLC35F1
|
solute carrier family 35, member F1 |
| chr11_-_73472096 | 0.01 |
ENST00000541588.1
ENST00000336083.3 ENST00000540771.1 ENST00000310653.6 |
RAB6A
|
RAB6A, member RAS oncogene family |
| chr10_+_89622870 | 0.01 |
ENST00000371953.3
|
PTEN
|
phosphatase and tensin homolog |
| chr15_+_38544476 | 0.01 |
ENST00000299084.4
|
SPRED1
|
sprouty-related, EVH1 domain containing 1 |
| chr10_+_82297658 | 0.01 |
ENST00000339284.2
|
SH2D4B
|
SH2 domain containing 4B |
| chr17_-_62502639 | 0.01 |
ENST00000225792.5
ENST00000581697.1 ENST00000584279.1 ENST00000577922.1 |
DDX5
|
DEAD (Asp-Glu-Ala-Asp) box helicase 5 |
| chr9_+_125026882 | 0.01 |
ENST00000297908.3
ENST00000373730.3 ENST00000546115.1 ENST00000344641.3 |
MRRF
|
mitochondrial ribosome recycling factor |
| chr19_-_46476791 | 0.01 |
ENST00000263257.5
|
NOVA2
|
neuro-oncological ventral antigen 2 |
| chrX_-_132549506 | 0.01 |
ENST00000370828.3
|
GPC4
|
glypican 4 |
| chr16_+_29823552 | 0.01 |
ENST00000300797.6
|
PRRT2
|
proline-rich transmembrane protein 2 |
| chr7_+_91875508 | 0.01 |
ENST00000265742.3
|
ANKIB1
|
ankyrin repeat and IBR domain containing 1 |
| chr6_+_99282570 | 0.01 |
ENST00000328345.5
|
POU3F2
|
POU class 3 homeobox 2 |
| chr12_-_48398104 | 0.01 |
ENST00000337299.6
ENST00000380518.3 |
COL2A1
|
collagen, type II, alpha 1 |
| chr3_+_58291965 | 0.01 |
ENST00000445193.3
ENST00000295959.5 ENST00000466547.1 |
RPP14
|
ribonuclease P/MRP 14kDa subunit |
| chr11_-_86666427 | 0.01 |
ENST00000531380.1
|
FZD4
|
frizzled family receptor 4 |
| chr3_-_12200851 | 0.01 |
ENST00000287814.4
|
TIMP4
|
TIMP metallopeptidase inhibitor 4 |
| chr11_+_33278811 | 0.01 |
ENST00000303296.4
ENST00000379016.3 |
HIPK3
|
homeodomain interacting protein kinase 3 |
| chr14_+_57046500 | 0.01 |
ENST00000261556.6
|
TMEM260
|
transmembrane protein 260 |
| chr6_-_46293378 | 0.01 |
ENST00000330430.6
|
RCAN2
|
regulator of calcineurin 2 |
| chr3_+_107241783 | 0.01 |
ENST00000415149.2
ENST00000402543.1 ENST00000325805.8 ENST00000427402.1 |
BBX
|
bobby sox homolog (Drosophila) |
| chr3_-_129407535 | 0.01 |
ENST00000432054.2
|
TMCC1
|
transmembrane and coiled-coil domain family 1 |
| chr5_+_122424816 | 0.01 |
ENST00000407847.4
|
PRDM6
|
PR domain containing 6 |
| chr2_-_54087066 | 0.01 |
ENST00000394705.2
ENST00000352846.3 ENST00000406625.2 |
GPR75
GPR75-ASB3
ASB3
|
G protein-coupled receptor 75 GPR75-ASB3 readthrough Ankyrin repeat and SOCS box protein 3 |
| chr16_+_50582222 | 0.01 |
ENST00000268459.3
|
NKD1
|
naked cuticle homolog 1 (Drosophila) |
| chr4_-_142053952 | 0.01 |
ENST00000515673.2
|
RNF150
|
ring finger protein 150 |
| chr10_-_62149433 | 0.01 |
ENST00000280772.2
|
ANK3
|
ankyrin 3, node of Ranvier (ankyrin G) |
| chr8_-_66754172 | 0.01 |
ENST00000401827.3
|
PDE7A
|
phosphodiesterase 7A |
| chr1_-_205326022 | 0.01 |
ENST00000367155.3
|
KLHDC8A
|
kelch domain containing 8A |
| chr11_-_106889250 | 0.01 |
ENST00000526355.2
|
GUCY1A2
|
guanylate cyclase 1, soluble, alpha 2 |
| chr1_+_82266053 | 0.01 |
ENST00000370715.1
ENST00000370713.1 ENST00000319517.6 ENST00000370717.2 ENST00000394879.1 ENST00000271029.4 ENST00000335786.5 |
LPHN2
|
latrophilin 2 |
| chr3_-_18466787 | 0.01 |
ENST00000338745.6
ENST00000450898.1 |
SATB1
|
SATB homeobox 1 |
| chr2_+_149632783 | 0.01 |
ENST00000435030.1
|
KIF5C
|
kinesin family member 5C |
| chr3_-_98620500 | 0.01 |
ENST00000326840.6
|
DCBLD2
|
discoidin, CUB and LCCL domain containing 2 |
| chr3_+_180319918 | 0.01 |
ENST00000296015.4
ENST00000491380.1 ENST00000412756.2 ENST00000382584.4 |
TTC14
|
tetratricopeptide repeat domain 14 |
| chr1_+_237205476 | 0.01 |
ENST00000366574.2
|
RYR2
|
ryanodine receptor 2 (cardiac) |
| chr12_+_110906169 | 0.00 |
ENST00000377673.5
|
FAM216A
|
family with sequence similarity 216, member A |
| chr4_-_55991752 | 0.00 |
ENST00000263923.4
|
KDR
|
kinase insert domain receptor (a type III receptor tyrosine kinase) |
| chr17_-_73775839 | 0.00 |
ENST00000592643.1
ENST00000591890.1 ENST00000587171.1 ENST00000254810.4 ENST00000589599.1 |
H3F3B
|
H3 histone, family 3B (H3.3B) |
| chr14_-_21737610 | 0.00 |
ENST00000320084.7
ENST00000449098.1 ENST00000336053.6 |
HNRNPC
|
heterogeneous nuclear ribonucleoprotein C (C1/C2) |
| chr10_-_88126224 | 0.00 |
ENST00000327946.7
|
GRID1
|
glutamate receptor, ionotropic, delta 1 |
| chr6_-_119670919 | 0.00 |
ENST00000368468.3
|
MAN1A1
|
mannosidase, alpha, class 1A, member 1 |
| chr3_-_164913777 | 0.00 |
ENST00000475390.1
|
SLITRK3
|
SLIT and NTRK-like family, member 3 |
| chr5_-_133561752 | 0.00 |
ENST00000519718.1
ENST00000481195.1 |
CTD-2410N18.5
PPP2CA
|
S-phase kinase-associated protein 1 protein phosphatase 2, catalytic subunit, alpha isozyme |
| chr1_+_21835858 | 0.00 |
ENST00000539907.1
ENST00000540617.1 ENST00000374840.3 |
ALPL
|
alkaline phosphatase, liver/bone/kidney |
| chr20_+_42143053 | 0.00 |
ENST00000373135.3
ENST00000444063.1 |
L3MBTL1
|
l(3)mbt-like 1 (Drosophila) |
| chr10_+_97803151 | 0.00 |
ENST00000403870.3
ENST00000265992.5 ENST00000465148.2 ENST00000534974.1 |
CCNJ
|
cyclin J |
| chr17_+_66508537 | 0.00 |
ENST00000392711.1
ENST00000585427.1 ENST00000589228.1 ENST00000536854.2 ENST00000588702.1 ENST00000589309.1 |
PRKAR1A
|
protein kinase, cAMP-dependent, regulatory, type I, alpha |
| chr1_+_11751748 | 0.00 |
ENST00000294485.5
|
DRAXIN
|
dorsal inhibitory axon guidance protein |
| chrX_-_110038990 | 0.00 |
ENST00000372045.1
ENST00000394797.4 |
CHRDL1
|
chordin-like 1 |
| chr19_+_1000418 | 0.00 |
ENST00000234389.3
|
GRIN3B
|
glutamate receptor, ionotropic, N-methyl-D-aspartate 3B |
| chr7_-_105517021 | 0.00 |
ENST00000318724.4
ENST00000419735.3 |
ATXN7L1
|
ataxin 7-like 1 |
| chr16_-_66785699 | 0.00 |
ENST00000258198.2
|
DYNC1LI2
|
dynein, cytoplasmic 1, light intermediate chain 2 |
| chr7_+_101928380 | 0.00 |
ENST00000536178.1
|
SH2B2
|
SH2B adaptor protein 2 |
| chr7_-_44365020 | 0.00 |
ENST00000395747.2
ENST00000347193.4 ENST00000346990.4 ENST00000258682.6 ENST00000353625.4 ENST00000421607.1 ENST00000424197.1 ENST00000502837.2 ENST00000350811.3 ENST00000395749.2 |
CAMK2B
|
calcium/calmodulin-dependent protein kinase II beta |
| chr4_+_170541660 | 0.00 |
ENST00000513761.1
ENST00000347613.4 |
CLCN3
|
chloride channel, voltage-sensitive 3 |
| chr11_+_125496124 | 0.00 |
ENST00000533778.2
ENST00000534070.1 |
CHEK1
|
checkpoint kinase 1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of UGCAGUC
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0002101 | tRNA wobble cytosine modification(GO:0002101) |
| 0.0 | 0.0 | GO:0070634 | transepithelial ammonium transport(GO:0070634) |
| 0.0 | 0.0 | GO:1903414 | spleen trabecula formation(GO:0060345) iron cation export(GO:1903414) ferrous iron export(GO:1903988) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0032937 | SREBP-SCAP-Insig complex(GO:0032937) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0016428 | tRNA (cytosine-5-)-methyltransferase activity(GO:0016428) |
| 0.0 | 0.0 | GO:0097689 | iron channel activity(GO:0097689) |
| 0.0 | 0.1 | GO:1990460 | leptin receptor binding(GO:1990460) |