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A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for UAAGACU

Z-value: 0.38

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miRNA associated with seed UAAGACU

NamemiRBASE accession
hsa-miR-499a-5p
MIMAT0002870

Activity profile of UAAGACU motif

Sorted Z-values of UAAGACU motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr8_+_48920960 0.22 ENST00000523111.2
ENST00000523432.1
ENST00000521346.1
ENST00000517630.1
UBE2V2
ubiquitin-conjugating enzyme E2 variant 2
chr1_-_108507631 0.20 ENST00000527011.1
ENST00000370056.4
VAV3
vav 3 guanine nucleotide exchange factor
chr15_+_44829255 0.13 ENST00000261868.5
ENST00000424492.3
EIF3J
eukaryotic translation initiation factor 3, subunit J
chr6_+_105404899 0.13 ENST00000345080.4
LIN28B
lin-28 homolog B (C. elegans)
chr10_-_89577910 0.13 ENST00000308448.7
ENST00000541004.1
ATAD1
ATPase family, AAA domain containing 1
chr5_+_56469775 0.13 ENST00000424459.3
GPBP1
GC-rich promoter binding protein 1
chr14_-_50698276 0.12 ENST00000216373.5
SOS2
son of sevenless homolog 2 (Drosophila)
chr15_+_52311398 0.11 ENST00000261845.5
MAPK6
mitogen-activated protein kinase 6
chr5_+_122110691 0.11 ENST00000379516.2
ENST00000505934.1
ENST00000514949.1
SNX2
sorting nexin 2
chr21_-_16437255 0.11 ENST00000400199.1
ENST00000400202.1
NRIP1
nuclear receptor interacting protein 1
chr1_+_90098606 0.10 ENST00000370454.4
LRRC8C
leucine rich repeat containing 8 family, member C
chr12_-_93323013 0.09 ENST00000322349.8
EEA1
early endosome antigen 1
chr2_-_68290106 0.09 ENST00000407324.1
ENST00000355848.3
ENST00000409302.1
ENST00000410067.3
C1D
C1D nuclear receptor corepressor
chr9_-_127952032 0.09 ENST00000456642.1
ENST00000373546.3
ENST00000373547.4
PPP6C
protein phosphatase 6, catalytic subunit
chr2_+_120517174 0.08 ENST00000263708.2
PTPN4
protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
chrY_+_15016725 0.08 ENST00000336079.3
DDX3Y
DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
chr2_-_71454185 0.08 ENST00000244221.8
PAIP2B
poly(A) binding protein interacting protein 2B
chr5_-_76788317 0.08 ENST00000296679.4
WDR41
WD repeat domain 41
chr5_-_114880533 0.07 ENST00000274457.3
FEM1C
fem-1 homolog c (C. elegans)
chrX_+_41192595 0.07 ENST00000399959.2
DDX3X
DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
chr1_+_97187318 0.07 ENST00000609116.1
ENST00000370198.1
ENST00000370197.1
ENST00000426398.2
ENST00000394184.3
PTBP2
polypyrimidine tract binding protein 2
chr3_+_186501336 0.07 ENST00000323963.5
ENST00000440191.2
ENST00000356531.5
EIF4A2
eukaryotic translation initiation factor 4A2
chr9_+_101867359 0.06 ENST00000374994.4
TGFBR1
transforming growth factor, beta receptor 1
chr16_+_53088885 0.06 ENST00000566029.1
ENST00000447540.1
CHD9
chromodomain helicase DNA binding protein 9
chr17_-_60142609 0.06 ENST00000397786.2
MED13
mediator complex subunit 13
chr5_+_112043186 0.06 ENST00000509732.1
ENST00000457016.1
ENST00000507379.1
APC
adenomatous polyposis coli
chr7_-_120498357 0.06 ENST00000415871.1
ENST00000222747.3
ENST00000430985.1
TSPAN12
tetraspanin 12
chr6_-_166075557 0.06 ENST00000539869.2
ENST00000366882.1
PDE10A
phosphodiesterase 10A
chr10_+_112631547 0.06 ENST00000280154.7
ENST00000393104.2
PDCD4
programmed cell death 4 (neoplastic transformation inhibitor)
chr10_+_98592009 0.06 ENST00000540664.1
ENST00000371103.3
LCOR
ligand dependent nuclear receptor corepressor
chr8_+_38614807 0.06 ENST00000330691.6
ENST00000348567.4
TACC1
transforming, acidic coiled-coil containing protein 1
chr3_-_71774516 0.06 ENST00000425534.3
EIF4E3
eukaryotic translation initiation factor 4E family member 3
chr7_-_139876812 0.06 ENST00000397560.2
JHDM1D
lysine (K)-specific demethylase 7A
chr7_-_105029329 0.05 ENST00000393651.3
ENST00000460391.1
SRPK2
SRSF protein kinase 2
chr12_+_72148614 0.05 ENST00000261263.3
RAB21
RAB21, member RAS oncogene family
chr9_-_72374848 0.05 ENST00000377200.5
ENST00000340434.4
ENST00000472967.2
PTAR1
protein prenyltransferase alpha subunit repeat containing 1
chrX_-_24045303 0.05 ENST00000328046.8
KLHL15
kelch-like family member 15
chr15_+_57210818 0.05 ENST00000438423.2
ENST00000267811.5
ENST00000452095.2
ENST00000559609.1
ENST00000333725.5
TCF12
transcription factor 12
chr5_-_131132614 0.05 ENST00000307968.7
ENST00000307954.8
FNIP1
folliculin interacting protein 1
chr10_-_75255724 0.05 ENST00000342558.3
ENST00000360663.5
ENST00000394829.2
ENST00000394828.2
ENST00000394822.2
PPP3CB
protein phosphatase 3, catalytic subunit, beta isozyme
chr10_-_32345305 0.05 ENST00000302418.4
KIF5B
kinesin family member 5B
chr2_-_172750733 0.05 ENST00000392592.4
ENST00000422440.2
SLC25A12
solute carrier family 25 (aspartate/glutamate carrier), member 12
chr17_-_45266542 0.04 ENST00000531206.1
ENST00000527547.1
ENST00000446365.2
ENST00000575483.1
ENST00000066544.3
CDC27
cell division cycle 27
chr15_-_49338748 0.04 ENST00000559471.1
SECISBP2L
SECIS binding protein 2-like
chr8_-_67579418 0.04 ENST00000310421.4
VCPIP1
valosin containing protein (p97)/p47 complex interacting protein 1
chr3_-_72496035 0.03 ENST00000477973.2
RYBP
RING1 and YY1 binding protein
chr12_-_42538657 0.03 ENST00000398675.3
GXYLT1
glucoside xylosyltransferase 1
chr12_+_50135588 0.03 ENST00000423828.1
ENST00000550445.1
TMBIM6
transmembrane BAX inhibitor motif containing 6
chr10_-_27149792 0.03 ENST00000376140.3
ENST00000376170.4
ABI1
abl-interactor 1
chr3_+_43328004 0.03 ENST00000454177.1
ENST00000429705.2
ENST00000296088.7
ENST00000437827.1
SNRK
SNF related kinase
chr8_+_42752053 0.03 ENST00000307602.4
HOOK3
hook microtubule-tethering protein 3
chr12_+_68042495 0.03 ENST00000344096.3
DYRK2
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
chr1_-_39347255 0.03 ENST00000454994.2
ENST00000357771.3
GJA9
gap junction protein, alpha 9, 59kDa
chr2_+_42396472 0.03 ENST00000318522.5
ENST00000402711.2
EML4
echinoderm microtubule associated protein like 4
chr13_-_50367057 0.03 ENST00000261667.3
KPNA3
karyopherin alpha 3 (importin alpha 4)
chr1_-_39339777 0.03 ENST00000397572.2
MYCBP
MYC binding protein
chr11_-_118047376 0.03 ENST00000278947.5
SCN2B
sodium channel, voltage-gated, type II, beta subunit
chr4_+_123747834 0.03 ENST00000264498.3
FGF2
fibroblast growth factor 2 (basic)
chr2_-_86564776 0.03 ENST00000165698.5
ENST00000541910.1
ENST00000535845.1
REEP1
receptor accessory protein 1
chr13_+_50571155 0.03 ENST00000420995.2
ENST00000378182.3
ENST00000356017.4
ENST00000457662.2
TRIM13
tripartite motif containing 13
chr7_+_65338230 0.02 ENST00000360768.3
VKORC1L1
vitamin K epoxide reductase complex, subunit 1-like 1
chr13_+_100258907 0.02 ENST00000376355.3
ENST00000376360.1
ENST00000444838.2
ENST00000376354.1
ENST00000339105.4
CLYBL
citrate lyase beta like
chr17_+_66508537 0.02 ENST00000392711.1
ENST00000585427.1
ENST00000589228.1
ENST00000536854.2
ENST00000588702.1
ENST00000589309.1
PRKAR1A
protein kinase, cAMP-dependent, regulatory, type I, alpha
chr11_-_86666427 0.02 ENST00000531380.1
FZD4
frizzled family receptor 4
chr17_-_62050278 0.02 ENST00000578147.1
ENST00000435607.1
SCN4A
sodium channel, voltage-gated, type IV, alpha subunit
chr6_+_133562472 0.02 ENST00000430974.2
ENST00000367895.5
ENST00000355167.3
ENST00000355286.6
EYA4
eyes absent homolog 4 (Drosophila)
chr6_-_13711773 0.02 ENST00000011619.3
RANBP9
RAN binding protein 9
chr13_+_49550015 0.02 ENST00000492622.2
FNDC3A
fibronectin type III domain containing 3A
chr5_+_112312416 0.02 ENST00000389063.2
DCP2
decapping mRNA 2
chr15_-_56535464 0.02 ENST00000559447.2
ENST00000422057.1
ENST00000317318.6
ENST00000423270.1
RFX7
regulatory factor X, 7
chr7_-_106301405 0.02 ENST00000523505.1
CCDC71L
coiled-coil domain containing 71-like
chr13_+_102104980 0.02 ENST00000545560.2
ITGBL1
integrin, beta-like 1 (with EGF-like repeat domains)
chr8_+_56014949 0.01 ENST00000327381.6
XKR4
XK, Kell blood group complex subunit-related family, member 4
chr17_-_5389477 0.01 ENST00000572834.1
ENST00000570848.1
ENST00000571971.1
ENST00000158771.4
DERL2
derlin 2
chr16_-_80838195 0.01 ENST00000570137.2
CDYL2
chromodomain protein, Y-like 2
chr3_+_29322803 0.01 ENST00000396583.3
ENST00000383767.2
RBMS3
RNA binding motif, single stranded interacting protein 3
chr6_+_163835669 0.01 ENST00000453779.2
ENST00000275262.7
ENST00000392127.2
ENST00000361752.3
QKI
QKI, KH domain containing, RNA binding
chr15_+_101142722 0.01 ENST00000332783.7
ENST00000558747.1
ENST00000343276.4
ASB7
ankyrin repeat and SOCS box containing 7
chr17_+_11144580 0.01 ENST00000441885.3
ENST00000432116.3
ENST00000409168.3
SHISA6
shisa family member 6
chr3_-_18466787 0.01 ENST00000338745.6
ENST00000450898.1
SATB1
SATB homeobox 1
chr12_-_12419703 0.01 ENST00000543091.1
ENST00000261349.4
LRP6
low density lipoprotein receptor-related protein 6
chr9_+_96793076 0.01 ENST00000375360.3
PTPDC1
protein tyrosine phosphatase domain containing 1
chr2_-_208030647 0.01 ENST00000309446.6
KLF7
Kruppel-like factor 7 (ubiquitous)
chr17_-_73775839 0.01 ENST00000592643.1
ENST00000591890.1
ENST00000587171.1
ENST00000254810.4
ENST00000589599.1
H3F3B
H3 histone, family 3B (H3.3B)
chr8_-_23712312 0.01 ENST00000290271.2
STC1
stanniocalcin 1
chr16_-_46655538 0.01 ENST00000303383.3
SHCBP1
SHC SH2-domain binding protein 1
chr7_-_44924939 0.01 ENST00000395699.2
PURB
purine-rich element binding protein B
chr5_-_79287060 0.01 ENST00000512560.1
ENST00000509852.1
ENST00000512528.1
MTX3
metaxin 3
chr7_+_155089486 0.00 ENST00000340368.4
ENST00000344756.4
ENST00000425172.1
ENST00000342407.5
INSIG1
insulin induced gene 1
chr2_-_64881018 0.00 ENST00000313349.3
SERTAD2
SERTA domain containing 2
chr4_+_103790120 0.00 ENST00000273986.4
CISD2
CDGSH iron sulfur domain 2
chr5_+_129240151 0.00 ENST00000305031.4
CHSY3
chondroitin sulfate synthase 3
chr9_+_82186872 0.00 ENST00000376544.3
ENST00000376520.4
TLE4
transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
chr1_-_205782304 0.00 ENST00000367137.3
SLC41A1
solute carrier family 41 (magnesium transporter), member 1
chr5_+_55033845 0.00 ENST00000353507.5
ENST00000514278.2
ENST00000505374.1
ENST00000506511.1
DDX4
DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
chr12_-_99548270 0.00 ENST00000546568.1
ENST00000332712.7
ENST00000546960.1
ANKS1B
ankyrin repeat and sterile alpha motif domain containing 1B
chr3_-_15563229 0.00 ENST00000383786.5
ENST00000383787.2
ENST00000383785.2
ENST00000383788.5
ENST00000603808.1
COLQ
collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase

Network of associatons between targets according to the STRING database.

First level regulatory network of UAAGACU

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0001543 ovarian follicle rupture(GO:0001543)
0.0 0.1 GO:1904761 negative regulation of myofibroblast differentiation(GO:1904761)
0.0 0.1 GO:0010587 miRNA catabolic process(GO:0010587)
0.0 0.1 GO:1905073 occluding junction disassembly(GO:1905071) regulation of occluding junction disassembly(GO:1905073) positive regulation of occluding junction disassembly(GO:1905075)
0.0 0.1 GO:0002904 positive regulation of B cell apoptotic process(GO:0002904)
0.0 0.0 GO:0043490 malate-aspartate shuttle(GO:0043490)
0.0 0.1 GO:0035063 nuclear speck organization(GO:0035063)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0031372 UBC13-MMS2 complex(GO:0031372)
0.0 0.1 GO:0030905 retromer, tubulation complex(GO:0030905)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:1990460 leptin receptor binding(GO:1990460)
0.0 0.0 GO:0099609 microtubule lateral binding(GO:0099609)