A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
STAT5A | hg19_v2_chr17_+_40440481_40440561 | -0.83 | 4.3e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr21_+_42792442 Show fit | 3.14 |
ENST00000398600.2
|
myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse) |
|
chr11_-_615570 Show fit | 2.89 |
ENST00000525445.1
ENST00000348655.6 ENST00000397566.1 |
interferon regulatory factor 7 |
|
chr7_-_139727118 Show fit | 2.09 |
ENST00000484111.1
|
poly (ADP-ribose) polymerase family, member 12 |
|
chr3_-_129375556 Show fit | 1.97 |
ENST00000510323.1
|
transmembrane and coiled-coil domain family 1 |
|
chr3_-_148939598 Show fit | 1.64 |
ENST00000455472.3
|
ceruloplasmin (ferroxidase) |
|
chr17_+_41158742 Show fit | 1.34 |
ENST00000415816.2
ENST00000438323.2 |
interferon-induced protein 35 |
|
chr6_-_26189304 Show fit | 1.34 |
ENST00000340756.2
|
histone cluster 1, H4d |
|
chr2_-_191878162 Show fit | 1.33 |
ENST00000540176.1
|
signal transducer and activator of transcription 1, 91kDa |
|
chr3_-_50649192 Show fit | 1.29 |
ENST00000443053.2
ENST00000348721.3 |
cytokine inducible SH2-containing protein |
|
chrX_+_106045891 Show fit | 1.17 |
ENST00000357242.5
ENST00000310452.2 ENST00000481617.2 ENST00000276175.3 |
TBC1 domain family, member 8B (with GRAM domain) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.3 | GO:0007029 | endoplasmic reticulum organization(GO:0007029) |
0.1 | 3.0 | GO:0003374 | dynamin polymerization involved in membrane fission(GO:0003373) dynamin polymerization involved in mitochondrial fission(GO:0003374) |
1.0 | 2.9 | GO:0034124 | regulation of MyD88-dependent toll-like receptor signaling pathway(GO:0034124) |
0.1 | 2.9 | GO:0006825 | copper ion transport(GO:0006825) |
0.2 | 1.9 | GO:0018377 | protein myristoylation(GO:0018377) |
0.2 | 1.8 | GO:0043152 | induction of bacterial agglutination(GO:0043152) |
0.1 | 1.8 | GO:0035455 | response to interferon-alpha(GO:0035455) |
0.1 | 1.5 | GO:0045039 | protein import into mitochondrial inner membrane(GO:0045039) |
0.0 | 1.5 | GO:0042149 | cellular response to glucose starvation(GO:0042149) |
0.1 | 1.4 | GO:2001032 | regulation of double-strand break repair via nonhomologous end joining(GO:2001032) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.5 | GO:0072562 | blood microparticle(GO:0072562) |
0.1 | 1.8 | GO:0005577 | fibrinogen complex(GO:0005577) |
0.1 | 1.7 | GO:0030992 | intraciliary transport particle B(GO:0030992) |
0.3 | 1.5 | GO:0042721 | mitochondrial inner membrane protein insertion complex(GO:0042721) |
0.1 | 1.5 | GO:0061700 | GATOR2 complex(GO:0061700) |
0.0 | 1.5 | GO:0035577 | azurophil granule membrane(GO:0035577) |
0.1 | 1.1 | GO:0031618 | nuclear pericentric heterochromatin(GO:0031618) |
0.0 | 1.1 | GO:0042645 | nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645) |
0.1 | 1.0 | GO:0000808 | origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664) |
0.0 | 1.0 | GO:0031233 | intrinsic component of external side of plasma membrane(GO:0031233) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.7 | GO:0003950 | NAD+ ADP-ribosyltransferase activity(GO:0003950) |
0.0 | 3.7 | GO:0000979 | RNA polymerase II core promoter sequence-specific DNA binding(GO:0000979) |
0.3 | 2.8 | GO:0016724 | ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724) |
0.0 | 2.4 | GO:0051087 | chaperone binding(GO:0051087) |
0.2 | 1.9 | GO:0001730 | 2'-5'-oligoadenylate synthetase activity(GO:0001730) |
0.0 | 1.7 | GO:0003743 | translation initiation factor activity(GO:0003743) |
0.3 | 1.4 | GO:0004905 | type I interferon receptor activity(GO:0004905) |
0.0 | 1.4 | GO:0019003 | GDP binding(GO:0019003) |
0.1 | 1.3 | GO:0016929 | SUMO-specific protease activity(GO:0016929) |
0.1 | 1.3 | GO:0015125 | bile acid transmembrane transporter activity(GO:0015125) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 3.1 | ST INTERFERON GAMMA PATHWAY | Interferon gamma pathway. |
0.0 | 2.5 | PID INTEGRIN3 PATHWAY | Beta3 integrin cell surface interactions |
0.0 | 2.4 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.0 | 2.0 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.0 | 1.3 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.0 | 1.2 | PID ATM PATHWAY | ATM pathway |
0.0 | 1.1 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.0 | 1.0 | SA CASPASE CASCADE | Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. |
0.0 | 1.0 | PID INSULIN PATHWAY | Insulin Pathway |
0.0 | 0.9 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.5 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.3 | 3.6 | REACTOME TRAF6 MEDIATED IRF7 ACTIVATION IN TLR7 8 OR 9 SIGNALING | Genes involved in TRAF6 mediated IRF7 activation in TLR7/8 or 9 signaling |
0.1 | 3.6 | REACTOME METAL ION SLC TRANSPORTERS | Genes involved in Metal ion SLC transporters |
0.1 | 3.0 | REACTOME REGULATION OF IFNA SIGNALING | Genes involved in Regulation of IFNA signaling |
0.1 | 2.2 | REACTOME COMMON PATHWAY | Genes involved in Common Pathway |
0.1 | 1.8 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |
0.0 | 1.5 | REACTOME DEPOSITION OF NEW CENPA CONTAINING NUCLEOSOMES AT THE CENTROMERE | Genes involved in Deposition of New CENPA-containing Nucleosomes at the Centromere |
0.0 | 1.4 | REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX | Genes involved in Activation of the pre-replicative complex |
0.0 | 1.4 | REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS | Genes involved in Golgi Associated Vesicle Biogenesis |
0.0 | 1.3 | REACTOME INSULIN SYNTHESIS AND PROCESSING | Genes involved in Insulin Synthesis and Processing |