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A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
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Results for PBX2
Z-value: 0.25
Motif logo
Transcription factors associated with PBX2
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
PBX2
|
ENSG00000204304.7 | PBX homeobox 2 |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| PBX2 | hg19_v2_chr6_-_32157947_32157992 | 0.71 | 1.1e-01 | Click! |
Activity profile of PBX2 motif
Sorted Z-values of PBX2 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr6_+_26045603 | 0.13 |
ENST00000540144.1
|
HIST1H3C
|
histone cluster 1, H3c |
| chr22_-_30642728 | 0.12 |
ENST00000403987.3
|
LIF
|
leukemia inhibitory factor |
| chr12_-_28125638 | 0.10 |
ENST00000545234.1
|
PTHLH
|
parathyroid hormone-like hormone |
| chr2_+_20646824 | 0.08 |
ENST00000272233.4
|
RHOB
|
ras homolog family member B |
| chr3_-_52864680 | 0.07 |
ENST00000406595.1
ENST00000485816.1 ENST00000434759.3 ENST00000346281.5 ENST00000266041.4 |
ITIH4
|
inter-alpha-trypsin inhibitor heavy chain family, member 4 |
| chr2_-_190044480 | 0.07 |
ENST00000374866.3
|
COL5A2
|
collagen, type V, alpha 2 |
| chr12_-_28124903 | 0.07 |
ENST00000395872.1
ENST00000354417.3 ENST00000201015.4 |
PTHLH
|
parathyroid hormone-like hormone |
| chr2_+_33661382 | 0.07 |
ENST00000402538.3
|
RASGRP3
|
RAS guanyl releasing protein 3 (calcium and DAG-regulated) |
| chr9_-_128246769 | 0.05 |
ENST00000444226.1
|
MAPKAP1
|
mitogen-activated protein kinase associated protein 1 |
| chr4_-_100065440 | 0.05 |
ENST00000508393.1
ENST00000265512.7 |
ADH4
|
alcohol dehydrogenase 4 (class II), pi polypeptide |
| chr2_-_99917639 | 0.05 |
ENST00000308528.4
|
LYG1
|
lysozyme G-like 1 |
| chr4_-_118006697 | 0.04 |
ENST00000310754.4
|
TRAM1L1
|
translocation associated membrane protein 1-like 1 |
| chr8_-_6420930 | 0.04 |
ENST00000325203.5
|
ANGPT2
|
angiopoietin 2 |
| chr12_-_120189900 | 0.04 |
ENST00000546026.1
|
CIT
|
citron (rho-interacting, serine/threonine kinase 21) |
| chr2_+_234602305 | 0.04 |
ENST00000406651.1
|
UGT1A6
|
UDP glucuronosyltransferase 1 family, polypeptide A6 |
| chr7_+_134528635 | 0.04 |
ENST00000445569.2
|
CALD1
|
caldesmon 1 |
| chr14_+_38033252 | 0.04 |
ENST00000554829.1
|
RP11-356O9.1
|
RP11-356O9.1 |
| chr3_-_112013071 | 0.04 |
ENST00000487372.1
ENST00000486574.1 ENST00000305815.5 |
SLC9C1
|
solute carrier family 9, subfamily C (Na+-transporting carboxylic acid decarboxylase), member 1 |
| chr17_-_29151794 | 0.03 |
ENST00000324238.6
|
CRLF3
|
cytokine receptor-like factor 3 |
| chr1_+_101702417 | 0.03 |
ENST00000305352.6
|
S1PR1
|
sphingosine-1-phosphate receptor 1 |
| chr3_+_129159039 | 0.03 |
ENST00000507564.1
ENST00000431818.2 ENST00000504021.1 ENST00000349441.2 ENST00000348417.2 ENST00000440957.2 |
IFT122
|
intraflagellar transport 122 homolog (Chlamydomonas) |
| chr12_+_41831485 | 0.03 |
ENST00000539469.2
ENST00000298919.7 |
PDZRN4
|
PDZ domain containing ring finger 4 |
| chr15_+_67418047 | 0.03 |
ENST00000540846.2
|
SMAD3
|
SMAD family member 3 |
| chr2_+_12857015 | 0.03 |
ENST00000155926.4
|
TRIB2
|
tribbles pseudokinase 2 |
| chr2_+_27255806 | 0.03 |
ENST00000238788.9
ENST00000404032.3 |
TMEM214
|
transmembrane protein 214 |
| chr1_-_39339777 | 0.03 |
ENST00000397572.2
|
MYCBP
|
MYC binding protein |
| chr16_+_1832902 | 0.03 |
ENST00000262302.9
ENST00000563136.1 ENST00000565987.1 ENST00000543305.1 ENST00000568287.1 ENST00000565134.1 |
NUBP2
|
nucleotide binding protein 2 |
| chr13_-_107220455 | 0.02 |
ENST00000400198.3
|
ARGLU1
|
arginine and glutamate rich 1 |
| chr3_+_129158926 | 0.02 |
ENST00000347300.2
ENST00000296266.3 |
IFT122
|
intraflagellar transport 122 homolog (Chlamydomonas) |
| chr11_-_62432641 | 0.02 |
ENST00000528405.1
ENST00000524958.1 ENST00000525675.1 |
RP11-831H9.11
C11orf48
|
Uncharacterized protein chromosome 11 open reading frame 48 |
| chr5_-_39462390 | 0.02 |
ENST00000511792.1
|
DAB2
|
Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) |
| chrX_+_56590002 | 0.02 |
ENST00000338222.5
|
UBQLN2
|
ubiquilin 2 |
| chr14_-_23624511 | 0.02 |
ENST00000529705.2
|
SLC7A8
|
solute carrier family 7 (amino acid transporter light chain, L system), member 8 |
| chr2_-_31440377 | 0.02 |
ENST00000444918.2
ENST00000403897.3 |
CAPN14
|
calpain 14 |
| chr2_+_234601512 | 0.02 |
ENST00000305139.6
|
UGT1A6
|
UDP glucuronosyltransferase 1 family, polypeptide A6 |
| chr11_+_62432777 | 0.01 |
ENST00000532971.1
|
METTL12
|
methyltransferase like 12 |
| chr17_+_8191815 | 0.01 |
ENST00000226105.6
ENST00000407006.4 ENST00000580434.1 ENST00000439238.3 |
RANGRF
|
RAN guanine nucleotide release factor |
| chr4_+_71019903 | 0.01 |
ENST00000344526.5
|
C4orf40
|
chromosome 4 open reading frame 40 |
| chr2_+_44396000 | 0.01 |
ENST00000409895.4
ENST00000409432.3 ENST00000282412.4 ENST00000378551.2 ENST00000345249.4 |
PPM1B
|
protein phosphatase, Mg2+/Mn2+ dependent, 1B |
| chr1_+_62417957 | 0.01 |
ENST00000307297.7
ENST00000543708.1 |
INADL
|
InaD-like (Drosophila) |
| chr16_+_1128781 | 0.01 |
ENST00000293897.4
ENST00000562758.1 |
SSTR5
|
somatostatin receptor 5 |
| chr3_-_47932759 | 0.01 |
ENST00000441748.2
ENST00000335271.5 |
MAP4
|
microtubule-associated protein 4 |
| chr10_+_47894572 | 0.01 |
ENST00000355876.5
|
FAM21B
|
family with sequence similarity 21, member B |
| chr22_+_42017987 | 0.01 |
ENST00000405506.1
|
XRCC6
|
X-ray repair complementing defective repair in Chinese hamster cells 6 |
| chr14_-_54317532 | 0.01 |
ENST00000418927.1
|
AL162759.1
|
AL162759.1 |
| chr12_-_39734783 | 0.01 |
ENST00000552961.1
|
KIF21A
|
kinesin family member 21A |
| chr14_+_64854958 | 0.01 |
ENST00000555709.2
ENST00000554739.1 ENST00000554768.1 ENST00000216605.8 |
MTHFD1
|
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase |
| chr12_+_53835425 | 0.01 |
ENST00000549924.1
|
PRR13
|
proline rich 13 |
| chr18_-_72920372 | 0.01 |
ENST00000581620.1
ENST00000582437.1 |
ZADH2
|
zinc binding alcohol dehydrogenase domain containing 2 |
| chr12_+_53835383 | 0.01 |
ENST00000429243.2
|
PRR13
|
proline rich 13 |
| chr2_+_113033164 | 0.00 |
ENST00000409871.1
ENST00000343936.4 |
ZC3H6
|
zinc finger CCCH-type containing 6 |
| chr3_+_188889737 | 0.00 |
ENST00000345063.3
|
TPRG1
|
tumor protein p63 regulated 1 |
| chr12_+_53835539 | 0.00 |
ENST00000547368.1
ENST00000379786.4 ENST00000551945.1 |
PRR13
|
proline rich 13 |
| chr3_+_159943362 | 0.00 |
ENST00000326474.3
|
C3orf80
|
chromosome 3 open reading frame 80 |
| chr12_+_53835508 | 0.00 |
ENST00000551003.1
ENST00000549068.1 ENST00000549740.1 ENST00000546581.1 ENST00000549581.1 ENST00000541275.1 |
PRR13
PCBP2
|
proline rich 13 poly(rC) binding protein 2 |
Network of associatons between targets according to the STRING database.
First level regulatory network of PBX2
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0060708 | spongiotrophoblast differentiation(GO:0060708) |
| 0.0 | 0.1 | GO:1903225 | negative regulation of endodermal cell differentiation(GO:1903225) |
| 0.0 | 0.0 | GO:0050928 | negative regulation of positive chemotaxis(GO:0050928) |
| 0.0 | 0.0 | GO:0003245 | cardiac muscle tissue growth involved in heart morphogenesis(GO:0003245) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0005588 | collagen type V trimer(GO:0005588) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0005146 | leukemia inhibitory factor receptor binding(GO:0005146) |
| 0.0 | 0.0 | GO:0019115 | benzaldehyde dehydrogenase activity(GO:0019115) |