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A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for NKX1-1

Z-value: 0.53

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Transcription factors associated with NKX1-1

Gene Symbol Gene ID Gene Info
ENSG00000235608.1 NK1 homeobox 1

Activity profile of NKX1-1 motif

Sorted Z-values of NKX1-1 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr1_-_159832438 0.37 ENST00000368100.1
V-set and immunoglobulin domain containing 8
chr18_+_63273310 0.33 ENST00000579862.1
RP11-775G23.1
chr17_+_1666108 0.30 ENST00000570731.1
serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
chr11_-_4629367 0.29 ENST00000533021.1
tripartite motif containing 68
chr4_-_87515202 0.25 ENST00000502302.1
ENST00000513186.1
mitogen-activated protein kinase 10
chr19_+_39930212 0.24 ENST00000396843.1
Interleukin-like; Uncharacterized protein
chr6_-_85473073 0.24 ENST00000606621.1
T-box 18
chr3_-_105587879 0.19 ENST00000264122.4
ENST00000403724.1
ENST00000405772.1
Cbl proto-oncogene B, E3 ubiquitin protein ligase
chr3_-_52567792 0.18 ENST00000307092.4
ENST00000422318.2
ENST00000459839.1
5'-nucleotidase domain containing 2
chr3_-_105588231 0.17 ENST00000545639.1
ENST00000394027.3
ENST00000438603.1
ENST00000447441.1
ENST00000443752.1
Cbl proto-oncogene B, E3 ubiquitin protein ligase
chr14_+_32798547 0.17 ENST00000557354.1
ENST00000557102.1
ENST00000557272.1
A kinase (PRKA) anchor protein 6
chr1_-_159915386 0.14 ENST00000361509.3
ENST00000368094.1
immunoglobulin superfamily, member 9
chr11_+_72983246 0.14 ENST00000393590.2
pyrimidinergic receptor P2Y, G-protein coupled, 6
chr5_+_66300464 0.12 ENST00000436277.1
microtubule associated serine/threonine kinase family member 4
chr2_+_8822113 0.12 ENST00000396290.1
ENST00000331129.3
inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
chr17_+_45286706 0.11 ENST00000393450.1
ENST00000572303.1
myosin, light chain 4, alkali; atrial, embryonic
chr11_-_4629388 0.11 ENST00000526337.1
ENST00000300747.5
tripartite motif containing 68
chr10_+_120789223 0.11 ENST00000425699.1
nanos homolog 1 (Drosophila)
chrX_-_153363188 0.11 ENST00000303391.6
methyl CpG binding protein 2 (Rett syndrome)
chr17_-_61777459 0.10 ENST00000578993.1
ENST00000583211.1
ENST00000259006.3
LIM domain containing 2
chr2_+_105050794 0.10 ENST00000429464.1
ENST00000414442.1
ENST00000447380.1
long intergenic non-protein coding RNA 1102
chr13_+_78315295 0.10 ENST00000351546.3
SLAIN motif family, member 1
chr1_+_174843548 0.10 ENST00000478442.1
ENST00000465412.1
RAB GTPase activating protein 1-like
chr7_+_2559399 0.09 ENST00000222725.5
ENST00000359574.3
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
chr19_+_41256764 0.09 ENST00000243563.3
ENST00000601253.1
ENST00000597353.1
ENST00000599362.1
small nuclear ribonucleoprotein polypeptide A
chr11_+_72983450 0.09 ENST00000536225.1
pyrimidinergic receptor P2Y, G-protein coupled, 6
chr12_+_7013897 0.08 ENST00000007969.8
ENST00000323702.5
leucine rich repeat containing 23
chr6_-_80247105 0.08 ENST00000369846.4
Leber congenital amaurosis 5
chr19_+_36249044 0.08 ENST00000444637.2
ENST00000396908.4
ENST00000544099.1
chromosome 19 open reading frame 55
chr7_-_86849883 0.08 ENST00000433078.1
transmembrane protein 243, mitochondrial
chr1_+_161691353 0.08 ENST00000367948.2
Fc receptor-like B
chr6_+_26501449 0.07 ENST00000244513.6
butyrophilin, subfamily 1, member A1
chr9_+_116225999 0.07 ENST00000317613.6
regulator of G-protein signaling 3
chr1_+_222910625 0.07 ENST00000360827.2
family with sequence similarity 177, member B
chr3_+_158519654 0.07 ENST00000415822.2
ENST00000392813.4
ENST00000264266.8
major facilitator superfamily domain containing 1
chr12_+_7014064 0.06 ENST00000443597.2
leucine rich repeat containing 23
chr11_-_47198380 0.06 ENST00000419701.2
ENST00000526342.1
ENST00000528444.1
ENST00000530596.1
ENST00000525398.1
ENST00000319543.6
ENST00000426335.2
ENST00000527927.1
ENST00000525314.1
ADP-ribosylation factor GTPase activating protein 2
chr9_+_139780942 0.06 ENST00000247668.2
ENST00000359662.3
TNF receptor-associated factor 2
chrX_-_47509994 0.06 ENST00000343894.4
ELK1, member of ETS oncogene family
chr10_-_1095050 0.06 ENST00000381344.3
isopentenyl-diphosphate delta isomerase 1
chr5_-_22853429 0.06 ENST00000504376.2
cadherin 12, type 2 (N-cadherin 2)
chr12_-_50790267 0.06 ENST00000327337.5
ENST00000543111.1
family with sequence similarity 186, member A
chr11_-_62521614 0.06 ENST00000527994.1
ENST00000394807.3
zinc finger and BTB domain containing 3
chr10_+_1095416 0.06 ENST00000358220.1
WD repeat domain 37
chr17_-_8113886 0.05 ENST00000577833.1
ENST00000534871.1
ENST00000583915.1
ENST00000316199.6
ENST00000581511.1
ENST00000585124.1
aurora kinase B
chr3_+_186560476 0.05 ENST00000320741.2
ENST00000444204.2
adiponectin, C1Q and collagen domain containing
chr12_+_6961279 0.05 ENST00000229268.8
ENST00000389231.5
ENST00000542087.1
ubiquitin specific peptidase 5 (isopeptidase T)
chr12_+_64798826 0.05 ENST00000540203.1
exportin, tRNA
chr10_-_99205607 0.05 ENST00000477692.2
ENST00000485122.2
ENST00000370886.5
ENST00000370885.4
ENST00000370902.3
ENST00000370884.5
exosome component 1
chr4_-_103682145 0.05 ENST00000226578.4
mannosidase, beta A, lysosomal
chr5_+_150226085 0.05 ENST00000522154.1
immunity-related GTPase family, M
chr17_+_45286387 0.05 ENST00000572316.1
ENST00000354968.1
ENST00000576874.1
ENST00000536623.2
myosin, light chain 4, alkali; atrial, embryonic
chr3_-_59035673 0.05 ENST00000491845.1
ENST00000472469.1
ENST00000471288.1
ENST00000295966.7
chromosome 3 open reading frame 67
chrX_+_55026763 0.05 ENST00000374987.3
APEX nuclease (apurinic/apyrimidinic endonuclease) 2
chr14_-_24711764 0.04 ENST00000557921.1
ENST00000558476.1
TERF1 (TRF1)-interacting nuclear factor 2
chr14_+_32798462 0.04 ENST00000280979.4
A kinase (PRKA) anchor protein 6
chr4_-_54232144 0.04 ENST00000388940.4
ENST00000503450.1
ENST00000401642.3
sec1 family domain containing 2
chr1_-_151762943 0.04 ENST00000368825.3
ENST00000368823.1
ENST00000458431.2
ENST00000368827.6
ENST00000368824.3
tudor and KH domain containing
chrX_+_72783026 0.04 ENST00000373504.6
ENST00000373502.5
cysteine-rich hydrophobic domain 1
chr11_-_71823715 0.04 ENST00000545944.1
ENST00000502597.2
anaphase promoting complex subunit 15
chr17_+_59489112 0.04 ENST00000335108.2
chromosome 17 open reading frame 82
chr11_+_134201768 0.04 ENST00000535456.2
ENST00000339772.7
galactosidase, beta 1-like 2
chr13_+_36050881 0.04 ENST00000537702.1
neurobeachin
chr8_+_94929273 0.03 ENST00000518573.1
pyruvate dehyrogenase phosphatase catalytic subunit 1
chr14_-_24711470 0.03 ENST00000559969.1
TERF1 (TRF1)-interacting nuclear factor 2
chr7_+_99647411 0.03 ENST00000438937.1
zinc finger and SCAN domain containing 21
chr1_-_221915418 0.03 ENST00000323825.3
ENST00000366899.3
dual specificity phosphatase 10
chr22_+_41601209 0.03 ENST00000216237.5
l(3)mbt-like 2 (Drosophila)
chr2_+_217524323 0.03 ENST00000456764.1
insulin-like growth factor binding protein 2, 36kDa
chr16_-_2318373 0.03 ENST00000566458.1
ENST00000320225.5
RNA binding protein S1, serine-rich domain
chr2_-_167232484 0.03 ENST00000375387.4
ENST00000303354.6
ENST00000409672.1
sodium channel, voltage-gated, type IX, alpha subunit
chr4_-_89442940 0.03 ENST00000527353.1
phosphatidylinositol glycan anchor biosynthesis, class Y
chr12_-_6961050 0.03 ENST00000538862.2
cell division cycle associated 3
chr4_-_66536196 0.02 ENST00000511294.1
EPH receptor A5
chr11_-_65625678 0.02 ENST00000308162.5
cofilin 1 (non-muscle)
chr7_-_27239703 0.02 ENST00000222753.4
homeobox A13
chr12_+_16500571 0.02 ENST00000543076.1
ENST00000396210.3
microsomal glutathione S-transferase 1
chr3_+_57261743 0.02 ENST00000288266.3
adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
chrX_-_153363125 0.02 ENST00000407218.1
ENST00000453960.2
methyl CpG binding protein 2 (Rett syndrome)
chr15_+_64386261 0.02 ENST00000560829.1
sorting nexin 1
chr7_+_99717230 0.02 ENST00000262932.3
canopy FGF signaling regulator 4
chr17_-_44657017 0.02 ENST00000573185.1
ENST00000570550.1
ENST00000445552.2
ENST00000336125.5
ENST00000329240.4
ENST00000337845.7
ADP-ribosylation factor-like 17A
chr3_+_186560462 0.02 ENST00000412955.2
adiponectin, C1Q and collagen domain containing
chr4_-_8873531 0.02 ENST00000400677.3
H6 family homeobox 1
chrX_-_47509887 0.01 ENST00000247161.3
ENST00000592066.1
ENST00000376983.3
ELK1, member of ETS oncogene family
chr7_+_70597109 0.01 ENST00000333538.5
Williams-Beuren syndrome chromosome region 17
chr1_+_240255166 0.01 ENST00000319653.9
formin 2
chr4_-_66536057 0.01 ENST00000273854.3
EPH receptor A5
chr22_-_39151463 0.01 ENST00000405510.1
ENST00000433561.1
Sad1 and UNC84 domain containing 2
chr11_-_71823796 0.01 ENST00000545680.1
ENST00000543587.1
ENST00000538393.1
ENST00000535234.1
ENST00000227618.4
ENST00000535503.1
anaphase promoting complex subunit 15
chr19_-_8070474 0.01 ENST00000407627.2
ENST00000593807.1
ELAV like RNA binding protein 1
chr1_-_21620877 0.01 ENST00000527991.1
endothelin converting enzyme 1
chr22_+_17956618 0.01 ENST00000262608.8
cat eye syndrome chromosome region, candidate 2
chr5_+_66300446 0.01 ENST00000261569.7
microtubule associated serine/threonine kinase family member 4
chr5_-_115890554 0.01 ENST00000509665.1
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chrX_+_19362011 0.01 ENST00000379806.5
ENST00000545074.1
ENST00000540249.1
ENST00000423505.1
ENST00000417819.1
ENST00000422285.2
ENST00000355808.5
ENST00000379805.3
pyruvate dehydrogenase (lipoamide) alpha 1
chr7_-_122339162 0.01 ENST00000340112.2
ring finger protein 133
chr1_+_155278539 0.01 ENST00000447866.1
farnesyl diphosphate synthase
chr12_+_16500599 0.01 ENST00000535309.1
ENST00000540056.1
ENST00000396209.1
ENST00000540126.1
microsomal glutathione S-transferase 1
chr6_+_34204642 0.01 ENST00000347617.6
ENST00000401473.3
ENST00000311487.5
ENST00000447654.1
ENST00000395004.3
high mobility group AT-hook 1
chr11_-_124981475 0.01 ENST00000532156.1
ENST00000532407.1
ENST00000279968.4
ENST00000527766.1
ENST00000529583.1
ENST00000524373.1
ENST00000527271.1
ENST00000526175.1
ENST00000529609.1
ENST00000533273.1
ENST00000531909.1
ENST00000529530.1
transmembrane protein 218
chr1_-_197115818 0.01 ENST00000367409.4
ENST00000294732.7
asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
chr16_-_2318055 0.01 ENST00000561518.1
ENST00000561718.1
ENST00000567147.1
ENST00000562690.1
ENST00000569598.2
RNA binding protein S1, serine-rich domain
chr8_+_94929077 0.00 ENST00000297598.4
ENST00000520614.1
pyruvate dehyrogenase phosphatase catalytic subunit 1
chr7_+_144052381 0.00 ENST00000498580.1
ENST00000056217.5
Rho guanine nucleotide exchange factor (GEF) 5
chr8_+_94929110 0.00 ENST00000520728.1
pyruvate dehyrogenase phosphatase catalytic subunit 1
chr8_+_26371763 0.00 ENST00000521913.1
dihydropyrimidinase-like 2
chr13_+_78315348 0.00 ENST00000441784.1
SLAIN motif family, member 1
chr1_-_231004220 0.00 ENST00000366663.5
chromosome 1 open reading frame 198
chr15_-_78526855 0.00 ENST00000541759.1
ENST00000558130.1
acyl-CoA synthetase bubblegum family member 1
chr7_-_99717463 0.00 ENST00000437822.2
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
chr10_+_99205894 0.00 ENST00000370854.3
ENST00000393760.1
ENST00000414567.1
ENST00000370846.4
zinc finger, DHHC-type containing 16
chr19_-_6424783 0.00 ENST00000398148.3
KH-type splicing regulatory protein
chr7_-_99716940 0.00 ENST00000440225.1
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa

Network of associatons between targets according to the STRING database.

First level regulatory network of NKX1-1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0060829 regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation(GO:0060827) negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation(GO:0060829)
0.0 0.3 GO:0071279 cellular response to cobalt ion(GO:0071279)
0.0 0.1 GO:0009405 pathogenesis(GO:0009405)
0.0 0.1 GO:0061030 epithelial cell differentiation involved in mammary gland alveolus development(GO:0061030)
0.0 0.2 GO:1902261 positive regulation of delayed rectifier potassium channel activity(GO:1902261)
0.0 0.1 GO:2000532 renal albumin absorption(GO:0097018) regulation of renal albumin absorption(GO:2000532) regulation of platelet-derived growth factor receptor-alpha signaling pathway(GO:2000583) negative regulation of platelet-derived growth factor receptor-alpha signaling pathway(GO:2000584)
0.0 0.2 GO:0007258 JUN phosphorylation(GO:0007258)
0.0 0.4 GO:0007175 negative regulation of epidermal growth factor-activated receptor activity(GO:0007175)
0.0 0.1 GO:1903721 regulation of I-kappaB phosphorylation(GO:1903719) positive regulation of I-kappaB phosphorylation(GO:1903721)
0.0 0.2 GO:0030321 transepithelial chloride transport(GO:0030321)
0.0 0.1 GO:0007386 compartment pattern specification(GO:0007386)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0097057 TRAF2-GSTP1 complex(GO:0097057)
0.0 0.2 GO:0014701 junctional sarcoplasmic reticulum membrane(GO:0014701)
0.0 0.3 GO:0043203 axon hillock(GO:0043203)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0045029 UDP-activated nucleotide receptor activity(GO:0045029)
0.0 0.2 GO:0004705 JUN kinase activity(GO:0004705) SAP kinase activity(GO:0016909)
0.0 0.1 GO:0005174 CD40 receptor binding(GO:0005174)
0.0 0.1 GO:0033829 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity(GO:0033829)
0.0 0.2 GO:0045159 myosin II binding(GO:0045159)
0.0 0.1 GO:0035614 snRNA stem-loop binding(GO:0035614)
0.0 0.2 GO:0008179 adenylate cyclase binding(GO:0008179)
0.0 0.1 GO:0010385 double-stranded methylated DNA binding(GO:0010385)

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME P2Y RECEPTORS Genes involved in P2Y receptors