A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SNAI2 | hg19_v2_chr8_-_49833978_49833996 | -0.86 | 2.7e-02 | Click! |
TCF4 | hg19_v2_chr18_-_53069419_53069471 | 0.85 | 3.3e-02 | Click! |
ID4 | hg19_v2_chr6_+_19837592_19837621 | -0.11 | 8.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr16_-_74808710 Show fit | 0.95 |
ENST00000219368.3
ENST00000544337.1 |
fatty acid 2-hydroxylase |
|
chr2_+_74212073 Show fit | 0.92 |
ENST00000441217.1
|
AC073046.25 |
|
chr7_+_66800928 Show fit | 0.75 |
ENST00000430244.1
|
RP11-166O4.5 |
|
chr17_-_78450398 Show fit | 0.73 |
ENST00000306773.4
|
neuronal pentraxin I |
|
chr7_+_44788430 Show fit | 0.69 |
ENST00000457123.1
ENST00000309315.4 |
zinc finger, MIZ-type containing 2 |
|
chr16_-_4039001 Show fit | 0.68 |
ENST00000576936.1
|
adenylate cyclase 9 |
|
chr5_+_443280 Show fit | 0.68 |
ENST00000508022.1
|
exocyst complex component 3 |
|
chr19_+_18794470 Show fit | 0.67 |
ENST00000321949.8
ENST00000338797.6 |
CREB regulated transcription coactivator 1 |
|
chr8_+_145438870 Show fit | 0.66 |
ENST00000527931.1
|
family with sequence similarity 203, member B |
|
chr19_-_47735918 Show fit | 0.63 |
ENST00000449228.1
ENST00000300880.7 ENST00000341983.4 |
BCL2 binding component 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.9 | GO:0030032 | lamellipodium assembly(GO:0030032) |
0.0 | 1.5 | GO:0034199 | activation of protein kinase A activity(GO:0034199) |
0.0 | 1.4 | GO:1902857 | positive regulation of nonmotile primary cilium assembly(GO:1902857) |
0.2 | 1.1 | GO:2001151 | regulation of renal water transport(GO:2001151) positive regulation of renal water transport(GO:2001153) |
0.1 | 1.1 | GO:0032286 | central nervous system myelin maintenance(GO:0032286) |
0.2 | 1.0 | GO:0097403 | cellular response to raffinose(GO:0097403) response to raffinose(GO:1901545) |
0.1 | 1.0 | GO:0003025 | regulation of systemic arterial blood pressure by baroreceptor feedback(GO:0003025) |
0.1 | 0.9 | GO:0016554 | cytidine to uridine editing(GO:0016554) |
0.1 | 0.8 | GO:0060385 | axonogenesis involved in innervation(GO:0060385) |
0.0 | 0.8 | GO:0019388 | galactose catabolic process(GO:0019388) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.3 | GO:0008074 | guanylate cyclase complex, soluble(GO:0008074) |
0.0 | 1.2 | GO:0005796 | Golgi lumen(GO:0005796) |
0.0 | 1.0 | GO:0046658 | anchored component of plasma membrane(GO:0046658) |
0.0 | 1.0 | GO:0043034 | costamere(GO:0043034) |
0.0 | 0.9 | GO:0014731 | spectrin-associated cytoskeleton(GO:0014731) |
0.1 | 0.8 | GO:0005642 | annulate lamellae(GO:0005642) |
0.0 | 0.8 | GO:0005614 | interstitial matrix(GO:0005614) |
0.0 | 0.8 | GO:0034992 | microtubule organizing center attachment site(GO:0034992) LINC complex(GO:0034993) |
0.0 | 0.8 | GO:0030173 | integral component of Golgi membrane(GO:0030173) |
0.1 | 0.7 | GO:0045323 | interleukin-1 receptor complex(GO:0045323) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.3 | GO:0004383 | guanylate cyclase activity(GO:0004383) |
0.0 | 1.3 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.0 | 1.2 | GO:0035925 | mRNA 3'-UTR AU-rich region binding(GO:0035925) |
0.1 | 1.1 | GO:0042577 | lipid phosphatase activity(GO:0042577) |
0.0 | 1.0 | GO:0008242 | omega peptidase activity(GO:0008242) |
0.0 | 1.0 | GO:0030676 | Rac guanyl-nucleotide exchange factor activity(GO:0030676) |
0.1 | 0.9 | GO:0047372 | acylglycerol lipase activity(GO:0047372) |
0.0 | 0.8 | GO:0017166 | vinculin binding(GO:0017166) |
0.0 | 0.8 | GO:0051539 | 4 iron, 4 sulfur cluster binding(GO:0051539) |
0.0 | 0.8 | GO:0031624 | ubiquitin conjugating enzyme binding(GO:0031624) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.3 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.0 | 2.1 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.0 | 1.5 | PID INTEGRIN A4B1 PATHWAY | Alpha4 beta1 integrin signaling events |
0.0 | 1.4 | SA TRKA RECEPTOR | The TrkA receptor binds nerve growth factor to activate MAP kinase pathways and promote cell growth. |
0.0 | 1.1 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 1.0 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 1.0 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 1.0 | PID AP1 PATHWAY | AP-1 transcription factor network |
0.0 | 1.0 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.0 | 0.9 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.0 | REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE | Genes involved in Synthesis of PIPs at the plasma membrane |
0.0 | 1.5 | REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S | Genes involved in Activation of Chaperone Genes by XBP1(S) |
0.0 | 1.1 | REACTOME SIGNALING BY NOTCH1 | Genes involved in Signaling by NOTCH1 |
0.0 | 1.1 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.1 | 1.0 | REACTOME IRAK1 RECRUITS IKK COMPLEX | Genes involved in IRAK1 recruits IKK complex |
0.0 | 1.0 | REACTOME DESTABILIZATION OF MRNA BY BRF1 | Genes involved in Destabilization of mRNA by Butyrate Response Factor 1 (BRF1) |
0.0 | 1.0 | REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY | Genes involved in Post-chaperonin tubulin folding pathway |
0.0 | 1.0 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.0 | 0.9 | REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY | Genes involved in Adenylate cyclase activating pathway |
0.0 | 0.9 | REACTOME P38MAPK EVENTS | Genes involved in p38MAPK events |