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A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for HOXC9

Z-value: 1.16

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Transcription factors associated with HOXC9

Gene Symbol Gene ID Gene Info
HOXC9
ENSG00000180806.4 homeobox C9

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
HOXC9hg19_v2_chr12_+_54393880_54393962-0.814.8e-02Click!

Activity profile of HOXC9 motif

Sorted Z-values of HOXC9 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr7_+_138915102 0.92 ENST00000486663.1
UBN2
ubinuclein 2
chr12_+_25348186 0.70 ENST00000555711.1
ENST00000556885.1
ENST00000554266.1
ENST00000556351.1
ENST00000556927.1
ENST00000556402.1
ENST00000553788.1
LYRM5
LYR motif containing 5
chrM_+_10464 0.67 ENST00000361335.1
MT-ND4L
mitochondrially encoded NADH dehydrogenase 4L
chr14_+_39944025 0.60 ENST00000554328.1
ENST00000556620.1
ENST00000557197.1
RP11-111A21.1
RP11-111A21.1
chr6_-_52859046 0.56 ENST00000457564.1
ENST00000541324.1
ENST00000370960.1
GSTA4
glutathione S-transferase alpha 4
chr2_+_162016827 0.53 ENST00000429217.1
ENST00000406287.1
ENST00000402568.1
TANK
TRAF family member-associated NFKB activator
chr12_+_25348139 0.52 ENST00000557540.2
ENST00000381356.4
LYRM5
LYR motif containing 5
chr2_+_162016804 0.50 ENST00000392749.2
ENST00000440506.1
TANK
TRAF family member-associated NFKB activator
chr12_+_20963647 0.49 ENST00000381545.3
SLCO1B3
solute carrier organic anion transporter family, member 1B3
chr2_+_187371440 0.47 ENST00000445547.1
ZC3H15
zinc finger CCCH-type containing 15
chr2_+_196440692 0.45 ENST00000458054.1
SLC39A10
solute carrier family 39 (zinc transporter), member 10
chr13_-_52027134 0.44 ENST00000311234.4
ENST00000425000.1
ENST00000463928.1
ENST00000442263.3
ENST00000398119.2
INTS6
integrator complex subunit 6
chr7_+_150382781 0.44 ENST00000223293.5
ENST00000474605.1
GIMAP2
GTPase, IMAP family member 2
chrM_+_10053 0.41 ENST00000361227.2
MT-ND3
mitochondrially encoded NADH dehydrogenase 3
chr2_+_38177575 0.40 ENST00000407257.1
ENST00000417700.2
ENST00000234195.3
ENST00000442857.1
RMDN2
regulator of microtubule dynamics 2
chr1_-_197115818 0.40 ENST00000367409.4
ENST00000294732.7
ASPM
asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
chr19_-_35068562 0.40 ENST00000595013.1
SCGB1B2P
secretoglobin, family 1B, member 2, pseudogene
chr14_+_96039882 0.40 ENST00000556346.1
ENST00000553785.1
RP11-1070N10.4
RP11-1070N10.4
chr9_-_15472730 0.40 ENST00000481862.1
PSIP1
PC4 and SFRS1 interacting protein 1
chr12_+_113354341 0.39 ENST00000553152.1
OAS1
2'-5'-oligoadenylate synthetase 1, 40/46kDa
chr11_-_14521349 0.39 ENST00000534234.1
COPB1
coatomer protein complex, subunit beta 1
chr12_+_123259063 0.39 ENST00000392441.4
ENST00000539171.1
CCDC62
coiled-coil domain containing 62
chr18_+_1099004 0.38 ENST00000581556.1
RP11-78F17.1
RP11-78F17.1
chr2_+_161993412 0.38 ENST00000259075.2
ENST00000432002.1
TANK
TRAF family member-associated NFKB activator
chr5_-_176433565 0.38 ENST00000428382.2
UIMC1
ubiquitin interaction motif containing 1
chr2_+_161993465 0.37 ENST00000457476.1
TANK
TRAF family member-associated NFKB activator
chr14_+_55494323 0.37 ENST00000339298.2
SOCS4
suppressor of cytokine signaling 4
chr9_-_37384431 0.37 ENST00000452923.1
RP11-397D12.4
RP11-397D12.4
chr6_-_52859968 0.37 ENST00000370959.1
GSTA4
glutathione S-transferase alpha 4
chr2_+_162016916 0.37 ENST00000405852.1
TANK
TRAF family member-associated NFKB activator
chr8_-_93978357 0.36 ENST00000522925.1
ENST00000522903.1
ENST00000537541.1
ENST00000518748.1
ENST00000519069.1
ENST00000521988.1
TRIQK
triple QxxK/R motif containing
chr2_+_160590469 0.36 ENST00000409591.1
MARCH7
membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
chr5_-_135290651 0.34 ENST00000522943.1
ENST00000514447.2
LECT2
leukocyte cell-derived chemotaxin 2
chr6_+_143447322 0.33 ENST00000458219.1
AIG1
androgen-induced 1
chr10_-_94257512 0.33 ENST00000371581.5
IDE
insulin-degrading enzyme
chr2_-_17981462 0.33 ENST00000402989.1
ENST00000428868.1
SMC6
structural maintenance of chromosomes 6
chr14_+_53173890 0.33 ENST00000445930.2
PSMC6
proteasome (prosome, macropain) 26S subunit, ATPase, 6
chr20_-_45980621 0.32 ENST00000446894.1
ZMYND8
zinc finger, MYND-type containing 8
chr8_+_76452097 0.32 ENST00000396423.2
HNF4G
hepatocyte nuclear factor 4, gamma
chr12_-_91546926 0.32 ENST00000550758.1
DCN
decorin
chr10_+_76871353 0.32 ENST00000542569.1
SAMD8
sterile alpha motif domain containing 8
chr11_+_65266507 0.32 ENST00000544868.1
MALAT1
metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
chr7_+_64838712 0.31 ENST00000328747.7
ENST00000431504.1
ENST00000357512.2
ZNF92
zinc finger protein 92
chr7_-_156685841 0.31 ENST00000354505.4
ENST00000540390.1
LMBR1
limb development membrane protein 1
chr8_-_93978333 0.31 ENST00000524037.1
ENST00000520430.1
ENST00000521617.1
TRIQK
triple QxxK/R motif containing
chr8_-_81083890 0.31 ENST00000518937.1
TPD52
tumor protein D52
chrX_+_150565653 0.31 ENST00000330374.6
VMA21
VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
chr3_-_170587815 0.31 ENST00000466674.1
RPL22L1
ribosomal protein L22-like 1
chr10_+_76871229 0.31 ENST00000372690.3
SAMD8
sterile alpha motif domain containing 8
chr6_-_109702885 0.30 ENST00000504373.1
CD164
CD164 molecule, sialomucin
chr11_-_7904464 0.29 ENST00000502624.2
ENST00000527565.1
RP11-35J10.5
RP11-35J10.5
chr19_-_23869999 0.29 ENST00000601935.1
ENST00000359788.4
ENST00000600313.1
ENST00000596211.1
ENST00000599168.1
ZNF675
zinc finger protein 675
chr1_+_150039877 0.29 ENST00000419023.1
VPS45
vacuolar protein sorting 45 homolog (S. cerevisiae)
chr22_+_45714361 0.28 ENST00000452238.1
FAM118A
family with sequence similarity 118, member A
chr3_+_87276407 0.28 ENST00000471660.1
ENST00000263780.4
ENST00000494980.1
CHMP2B
charged multivesicular body protein 2B
chr14_+_57671888 0.28 ENST00000391612.1
AL391152.1
AL391152.1
chr4_-_103749105 0.28 ENST00000394801.4
ENST00000394804.2
UBE2D3
ubiquitin-conjugating enzyme E2D 3
chrX_+_123097014 0.28 ENST00000394478.1
STAG2
stromal antigen 2
chr3_-_170587974 0.27 ENST00000463836.1
RPL22L1
ribosomal protein L22-like 1
chr20_+_43803517 0.27 ENST00000243924.3
PI3
peptidase inhibitor 3, skin-derived
chr8_-_93978216 0.27 ENST00000517751.1
ENST00000524107.1
TRIQK
triple QxxK/R motif containing
chr18_+_20378191 0.27 ENST00000583700.1
RBBP8
retinoblastoma binding protein 8
chr10_+_78078088 0.26 ENST00000496424.2
C10orf11
chromosome 10 open reading frame 11
chr10_-_115614127 0.26 ENST00000369305.1
DCLRE1A
DNA cross-link repair 1A
chr16_-_56485257 0.26 ENST00000300291.5
NUDT21
nudix (nucleoside diphosphate linked moiety X)-type motif 21
chr9_-_179018 0.26 ENST00000431099.2
ENST00000382447.4
ENST00000382389.1
ENST00000377447.3
ENST00000314367.10
ENST00000356521.4
ENST00000382393.1
ENST00000377400.4
CBWD1
COBW domain containing 1
chr8_-_81083731 0.26 ENST00000379096.5
TPD52
tumor protein D52
chr4_-_103749313 0.25 ENST00000394803.5
UBE2D3
ubiquitin-conjugating enzyme E2D 3
chr10_+_45495898 0.25 ENST00000298299.3
ZNF22
zinc finger protein 22
chr6_-_27782548 0.25 ENST00000333151.3
HIST1H2AJ
histone cluster 1, H2aj
chr3_-_69402828 0.25 ENST00000460709.1
FRMD4B
FERM domain containing 4B
chr12_+_20963632 0.25 ENST00000540853.1
ENST00000261196.2
SLCO1B3
solute carrier organic anion transporter family, member 1B3
chr1_+_212965170 0.25 ENST00000532324.1
ENST00000366974.4
ENST00000530441.1
ENST00000526641.1
ENST00000531963.1
ENST00000366973.4
ENST00000526997.1
ENST00000488246.2
TATDN3
TatD DNase domain containing 3
chr14_+_53173910 0.25 ENST00000606149.1
ENST00000555339.1
ENST00000556813.1
PSMC6
proteasome (prosome, macropain) 26S subunit, ATPase, 6
chr2_-_4703793 0.25 ENST00000421212.1
ENST00000412134.1
AC022311.1
AC022311.1
chr8_+_52730143 0.25 ENST00000415643.1
AC090186.1
Uncharacterized protein
chr5_-_58295712 0.25 ENST00000317118.8
PDE4D
phosphodiesterase 4D, cAMP-specific
chr8_+_16884740 0.24 ENST00000318063.5
MICU3
mitochondrial calcium uptake family, member 3
chr7_+_64838786 0.24 ENST00000450302.2
ZNF92
zinc finger protein 92
chr12_-_90049878 0.24 ENST00000359142.3
ATP2B1
ATPase, Ca++ transporting, plasma membrane 1
chr8_+_104033277 0.24 ENST00000518857.1
ENST00000395862.3
ATP6V1C1
ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
chr2_-_200715834 0.23 ENST00000420128.1
ENST00000416668.1
FTCDNL1
formiminotransferase cyclodeaminase N-terminal like
chr6_-_26189304 0.23 ENST00000340756.2
HIST1H4D
histone cluster 1, H4d
chr4_+_155484103 0.23 ENST00000302068.4
FGB
fibrinogen beta chain
chr4_+_155484155 0.23 ENST00000509493.1
FGB
fibrinogen beta chain
chr4_+_56815102 0.22 ENST00000257287.4
CEP135
centrosomal protein 135kDa
chr1_+_178694300 0.22 ENST00000367635.3
RALGPS2
Ral GEF with PH domain and SH3 binding motif 2
chr8_+_91233744 0.22 ENST00000524361.1
LINC00534
long intergenic non-protein coding RNA 534
chr17_+_58018269 0.22 ENST00000591035.1
RP11-178C3.1
Uncharacterized protein
chr14_+_20187174 0.22 ENST00000557414.1
OR4N2
olfactory receptor, family 4, subfamily N, member 2
chr2_+_207630081 0.21 ENST00000236980.6
ENST00000418289.1
ENST00000402774.3
ENST00000403094.3
FASTKD2
FAST kinase domains 2
chr8_+_104033296 0.21 ENST00000521514.1
ENST00000518738.1
ATP6V1C1
ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
chr8_-_80993010 0.21 ENST00000537855.1
ENST00000520527.1
ENST00000517427.1
ENST00000448733.2
ENST00000379097.3
TPD52
tumor protein D52
chr2_+_172309634 0.21 ENST00000339506.3
DCAF17
DDB1 and CUL4 associated factor 17
chr20_+_5987890 0.21 ENST00000378868.4
CRLS1
cardiolipin synthase 1
chr7_+_7606497 0.20 ENST00000340080.4
ENST00000405785.1
ENST00000433635.1
MIOS
missing oocyte, meiosis regulator, homolog (Drosophila)
chr15_+_45003675 0.20 ENST00000558401.1
ENST00000559916.1
ENST00000544417.1
B2M
beta-2-microglobulin
chr16_-_66907139 0.20 ENST00000561579.2
NAE1
NEDD8 activating enzyme E1 subunit 1
chr2_+_143635222 0.20 ENST00000375773.2
ENST00000409512.1
ENST00000410015.2
KYNU
kynureninase
chr8_-_17555164 0.20 ENST00000297488.6
MTUS1
microtubule associated tumor suppressor 1
chr11_+_73498973 0.20 ENST00000537007.1
MRPL48
mitochondrial ribosomal protein L48
chr1_-_212965104 0.20 ENST00000422588.2
ENST00000366975.6
ENST00000366977.3
ENST00000366976.1
NSL1
NSL1, MIS12 kinetochore complex component
chr3_+_56591184 0.19 ENST00000422222.1
ENST00000394672.3
ENST00000326595.7
CCDC66
coiled-coil domain containing 66
chr14_+_52327350 0.19 ENST00000555472.1
ENST00000556766.1
GNG2
guanine nucleotide binding protein (G protein), gamma 2
chr12_-_90049828 0.19 ENST00000261173.2
ENST00000348959.3
ATP2B1
ATPase, Ca++ transporting, plasma membrane 1
chr19_-_48752812 0.19 ENST00000359009.4
CARD8
caspase recruitment domain family, member 8
chr9_+_70856899 0.19 ENST00000377342.5
ENST00000478048.1
CBWD3
COBW domain containing 3
chr18_-_44702668 0.19 ENST00000256433.3
IER3IP1
immediate early response 3 interacting protein 1
chr2_+_114195268 0.19 ENST00000259199.4
ENST00000416503.2
ENST00000433343.2
CBWD2
COBW domain containing 2
chr1_+_158979792 0.19 ENST00000359709.3
ENST00000430894.2
IFI16
interferon, gamma-inducible protein 16
chr1_+_63989004 0.19 ENST00000371088.4
EFCAB7
EF-hand calcium binding domain 7
chr3_+_16306691 0.19 ENST00000285083.5
ENST00000605932.1
ENST00000435829.2
OXNAD1
oxidoreductase NAD-binding domain containing 1
chr12_-_8803128 0.19 ENST00000543467.1
MFAP5
microfibrillar associated protein 5
chr2_+_37571845 0.19 ENST00000537448.1
QPCT
glutaminyl-peptide cyclotransferase
chr17_-_46690839 0.19 ENST00000498634.2
HOXB8
homeobox B8
chr6_-_83903600 0.19 ENST00000506587.1
ENST00000507554.1
PGM3
phosphoglucomutase 3
chr8_+_91233711 0.18 ENST00000523283.1
ENST00000517400.1
LINC00534
long intergenic non-protein coding RNA 534
chr7_+_7196565 0.18 ENST00000429911.1
C1GALT1
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
chr7_+_130126165 0.18 ENST00000427521.1
ENST00000416162.2
ENST00000378576.4
MEST
mesoderm specific transcript
chr2_-_111230393 0.18 ENST00000447537.2
ENST00000413601.2
LIMS3L
LIMS3L
LIM and senescent cell antigen-like-containing domain protein 3; Uncharacterized protein; cDNA FLJ59124, highly similar to Particularly interesting newCys-His protein; cDNA, FLJ79109, highly similar to Particularly interesting newCys-His protein
LIM and senescent cell antigen-like domains 3-like
chr5_-_145562147 0.18 ENST00000545646.1
ENST00000274562.9
ENST00000510191.1
ENST00000394434.2
LARS
leucyl-tRNA synthetase
chr7_+_93690435 0.18 ENST00000438538.1
AC003092.1
AC003092.1
chr6_+_111303218 0.18 ENST00000441448.2
RPF2
ribosome production factor 2 homolog (S. cerevisiae)
chr5_-_148442584 0.18 ENST00000394358.2
ENST00000512049.1
SH3TC2
SH3 domain and tetratricopeptide repeats 2
chr2_-_69664586 0.18 ENST00000303698.3
ENST00000394305.1
ENST00000410022.2
NFU1
NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
chr14_+_62164340 0.17 ENST00000557538.1
ENST00000539097.1
HIF1A
hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
chr15_+_47631257 0.17 ENST00000560636.1
SEMA6D
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
chr3_+_138340049 0.17 ENST00000464668.1
FAIM
Fas apoptotic inhibitory molecule
chr10_+_98592009 0.17 ENST00000540664.1
ENST00000371103.3
LCOR
ligand dependent nuclear receptor corepressor
chr13_+_96085847 0.17 ENST00000376873.3
CLDN10
claudin 10
chr13_+_33160553 0.17 ENST00000315596.10
PDS5B
PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
chr2_+_86669118 0.17 ENST00000427678.1
ENST00000542128.1
KDM3A
lysine (K)-specific demethylase 3A
chr1_+_35734562 0.17 ENST00000314607.6
ENST00000373297.2
ZMYM4
zinc finger, MYM-type 4
chr10_-_13344341 0.17 ENST00000396920.3
PHYH
phytanoyl-CoA 2-hydroxylase
chr19_-_36304201 0.17 ENST00000301175.3
PRODH2
proline dehydrogenase (oxidase) 2
chrX_-_16887963 0.17 ENST00000380084.4
RBBP7
retinoblastoma binding protein 7
chr2_+_70121075 0.17 ENST00000409116.1
SNRNP27
small nuclear ribonucleoprotein 27kDa (U4/U6.U5)
chr3_-_170588163 0.17 ENST00000295830.8
RPL22L1
ribosomal protein L22-like 1
chr18_-_32870148 0.16 ENST00000589178.1
ENST00000333206.5
ENST00000592278.1
ENST00000592211.1
ENST00000420878.3
ENST00000383091.2
ENST00000586922.2
ZSCAN30
RP11-158H5.7
zinc finger and SCAN domain containing 30
RP11-158H5.7
chr8_-_93978309 0.16 ENST00000517858.1
ENST00000378861.5
TRIQK
triple QxxK/R motif containing
chr1_-_113615699 0.16 ENST00000421157.1
RP11-31F15.2
RP11-31F15.2
chr16_-_12070468 0.16 ENST00000538896.1
RP11-166B2.1
Putative NPIP-like protein LOC729978
chr19_-_48753104 0.16 ENST00000447740.2
CARD8
caspase recruitment domain family, member 8
chr19_+_21265028 0.16 ENST00000291770.7
ZNF714
zinc finger protein 714
chr4_+_86525299 0.16 ENST00000512201.1
ARHGAP24
Rho GTPase activating protein 24
chr1_-_212004090 0.16 ENST00000366997.4
LPGAT1
lysophosphatidylglycerol acyltransferase 1
chr13_-_24007815 0.16 ENST00000382298.3
SACS
spastic ataxia of Charlevoix-Saguenay (sacsin)
chr5_-_68665296 0.16 ENST00000512152.1
ENST00000503245.1
ENST00000512561.1
ENST00000380822.4
TAF9
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa
chr15_+_52155001 0.16 ENST00000544199.1
TMOD3
tropomodulin 3 (ubiquitous)
chr5_+_169011033 0.16 ENST00000513795.1
SPDL1
spindle apparatus coiled-coil protein 1
chr12_-_15374343 0.16 ENST00000256953.2
ENST00000546331.1
RERG
RAS-like, estrogen-regulated, growth inhibitor
chr9_-_98189055 0.15 ENST00000433644.2
RP11-435O5.2
RP11-435O5.2
chr22_-_27456361 0.15 ENST00000453934.1
CTA-992D9.6
CTA-992D9.6
chr4_-_69215467 0.15 ENST00000579690.1
YTHDC1
YTH domain containing 1
chr13_+_36050881 0.15 ENST00000537702.1
NBEA
neurobeachin
chr5_-_65018834 0.15 ENST00000506816.1
SGTB
small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
chr1_+_150039787 0.15 ENST00000535106.1
VPS45
vacuolar protein sorting 45 homolog (S. cerevisiae)
chr1_+_16370271 0.15 ENST00000375679.4
CLCNKB
chloride channel, voltage-sensitive Kb
chr11_+_5710919 0.15 ENST00000379965.3
ENST00000425490.1
TRIM22
tripartite motif containing 22
chr10_-_123687497 0.15 ENST00000369040.3
ENST00000224652.6
ENST00000369043.3
ATE1
arginyltransferase 1
chr6_+_111408698 0.15 ENST00000368851.5
SLC16A10
solute carrier family 16 (aromatic amino acid transporter), member 10
chr3_+_112709804 0.15 ENST00000383677.3
GTPBP8
GTP-binding protein 8 (putative)
chrX_+_13671225 0.15 ENST00000545566.1
ENST00000544987.1
ENST00000314720.4
TCEANC
transcription elongation factor A (SII) N-terminal and central domain containing
chr11_+_71900572 0.15 ENST00000312293.4
FOLR1
folate receptor 1 (adult)
chr4_+_123844225 0.15 ENST00000274008.4
SPATA5
spermatogenesis associated 5
chr8_-_17579726 0.15 ENST00000381861.3
MTUS1
microtubule associated tumor suppressor 1
chr6_-_135424186 0.14 ENST00000529882.1
HBS1L
HBS1-like (S. cerevisiae)
chr11_+_43333513 0.14 ENST00000534695.1
ENST00000455725.2
ENST00000531273.1
ENST00000420461.2
ENST00000378852.3
ENST00000534600.1
API5
apoptosis inhibitor 5
chr7_-_156685890 0.14 ENST00000353442.5
LMBR1
limb development membrane protein 1
chrX_+_139791917 0.14 ENST00000607004.1
ENST00000370535.3
LINC00632
long intergenic non-protein coding RNA 632
chr3_-_141719195 0.14 ENST00000397991.4
TFDP2
transcription factor Dp-2 (E2F dimerization partner 2)
chr18_+_32558380 0.14 ENST00000588349.2
MAPRE2
microtubule-associated protein, RP/EB family, member 2
chr12_+_32687221 0.14 ENST00000525053.1
FGD4
FYVE, RhoGEF and PH domain containing 4
chr2_+_48541776 0.14 ENST00000413569.1
ENST00000340553.3
FOXN2
forkhead box N2
chr8_-_93978346 0.14 ENST00000523580.1
TRIQK
triple QxxK/R motif containing
chr15_+_69854027 0.13 ENST00000498938.2
RP11-279F6.1
RP11-279F6.1
chr11_+_73498898 0.13 ENST00000535529.1
ENST00000497094.2
ENST00000411840.2
ENST00000535277.1
ENST00000398483.3
ENST00000542303.1
MRPL48
mitochondrial ribosomal protein L48
chr8_+_92114060 0.13 ENST00000518304.1
LRRC69
leucine rich repeat containing 69
chr4_-_184243561 0.13 ENST00000514470.1
ENST00000541814.1
CLDN24
claudin 24
chr16_+_28505955 0.13 ENST00000564831.1
ENST00000328423.5
ENST00000431282.1
APOBR
apolipoprotein B receptor
chr3_-_25824872 0.13 ENST00000308710.5
NGLY1
N-glycanase 1
chr1_-_26231589 0.12 ENST00000374291.1
STMN1
stathmin 1
chr2_-_216878305 0.12 ENST00000263268.6
MREG
melanoregulin
chr7_+_130126012 0.12 ENST00000341441.5
MEST
mesoderm specific transcript
chr14_+_78174414 0.12 ENST00000557342.1
ENST00000238688.5
ENST00000557623.1
ENST00000557431.1
ENST00000556831.1
ENST00000556375.1
ENST00000553981.1
SLIRP
SRA stem-loop interacting RNA binding protein
chrX_-_9734004 0.12 ENST00000467482.1
ENST00000380929.2
GPR143
G protein-coupled receptor 143
chr10_+_74927875 0.12 ENST00000242505.6
FAM149B1
family with sequence similarity 149, member B1
chr7_+_116595028 0.12 ENST00000397751.1
ST7-OT4
ST7 overlapping transcript 4
chr3_-_151034734 0.12 ENST00000260843.4
GPR87
G protein-coupled receptor 87
chr12_-_110906027 0.12 ENST00000537466.2
ENST00000550974.1
ENST00000228827.3
GPN3
GPN-loop GTPase 3
chr7_+_106810165 0.12 ENST00000468401.1
ENST00000497535.1
ENST00000485846.1
HBP1
HMG-box transcription factor 1
chr3_+_16306837 0.12 ENST00000606098.1
OXNAD1
oxidoreductase NAD-binding domain containing 1
chr4_-_103748880 0.12 ENST00000453744.2
ENST00000349311.8
UBE2D3
ubiquitin-conjugating enzyme E2D 3
chr3_-_124653579 0.12 ENST00000478191.1
ENST00000311075.3
MUC13
mucin 13, cell surface associated
chr17_-_38956205 0.12 ENST00000306658.7
KRT28
keratin 28
chr17_-_9862772 0.12 ENST00000580865.1
ENST00000583882.1
GAS7
growth arrest-specific 7
chr14_+_31046959 0.12 ENST00000547532.1
ENST00000555429.1
G2E3
G2/M-phase specific E3 ubiquitin protein ligase
chr20_-_48782639 0.11 ENST00000435301.2
RP11-112L6.3
RP11-112L6.3
chr5_-_159846066 0.11 ENST00000519349.1
ENST00000520664.1
SLU7
SLU7 splicing factor homolog (S. cerevisiae)
chr3_+_50230105 0.11 ENST00000440836.1
GNAT1
guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1

Network of associatons between targets according to the STRING database.

First level regulatory network of HOXC9

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.1 GO:2000158 positive regulation of ubiquitin-specific protease activity(GO:2000158)
0.1 0.4 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.1 0.5 GO:1903615 regulation of protein tyrosine phosphatase activity(GO:1903613) positive regulation of protein tyrosine phosphatase activity(GO:1903615)
0.1 0.3 GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase(GO:0017186)
0.1 0.3 GO:1901143 insulin catabolic process(GO:1901143)
0.1 0.3 GO:0061763 multivesicular body-lysosome fusion(GO:0061763)
0.1 0.2 GO:1904432 positive regulation of iron ion transport(GO:0034758) positive regulation of iron ion transmembrane transport(GO:0034761) regulation of iron ion import(GO:1900390) regulation of ferrous iron import into cell(GO:1903989) positive regulation of ferrous iron import into cell(GO:1903991) regulation of ferrous iron binding(GO:1904432) positive regulation of ferrous iron binding(GO:1904434) regulation of transferrin receptor binding(GO:1904435) positive regulation of transferrin receptor binding(GO:1904437) regulation of ferrous iron import across plasma membrane(GO:1904438) positive regulation of ferrous iron import across plasma membrane(GO:1904440)
0.1 0.3 GO:0071684 blastocyst hatching(GO:0001835) hatching(GO:0035188) organism emergence from protective structure(GO:0071684)
0.1 0.2 GO:0003147 neural crest cell migration involved in heart formation(GO:0003147) anterior neural tube closure(GO:0061713) cellular response to folic acid(GO:0071231)
0.1 0.2 GO:0006429 glutaminyl-tRNA aminoacylation(GO:0006425) leucyl-tRNA aminoacylation(GO:0006429)
0.1 0.2 GO:0070101 positive regulation of chemokine-mediated signaling pathway(GO:0070101)
0.1 0.4 GO:0070537 histone H2A K63-linked deubiquitination(GO:0070537)
0.1 0.6 GO:0006686 sphingomyelin biosynthetic process(GO:0006686)
0.0 0.2 GO:0019442 tryptophan catabolic process to acetyl-CoA(GO:0019442)
0.0 0.4 GO:1990034 cellular response to corticosterone stimulus(GO:0071386) calcium ion export from cell(GO:1990034)
0.0 0.2 GO:0016598 protein arginylation(GO:0016598)
0.0 0.2 GO:0016267 O-glycan processing, core 1(GO:0016267)
0.0 0.3 GO:1900747 negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747)
0.0 0.4 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.0 0.2 GO:1902775 mitochondrial large ribosomal subunit assembly(GO:1902775)
0.0 0.5 GO:0043152 induction of bacterial agglutination(GO:0043152)
0.0 0.1 GO:0000961 negative regulation of mitochondrial RNA catabolic process(GO:0000961)
0.0 0.3 GO:1902952 positive regulation of dendritic spine maintenance(GO:1902952)
0.0 0.1 GO:0002188 translation reinitiation(GO:0002188)
0.0 0.2 GO:0046292 spermatid nucleus elongation(GO:0007290) formaldehyde metabolic process(GO:0046292)
0.0 0.2 GO:0097089 methyl-branched fatty acid metabolic process(GO:0097089)
0.0 0.1 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.0 0.3 GO:2000660 negative regulation of interleukin-1-mediated signaling pathway(GO:2000660)
0.0 0.2 GO:0035407 histone H3-T11 phosphorylation(GO:0035407)
0.0 0.1 GO:0042441 eye pigment biosynthetic process(GO:0006726) eye pigment metabolic process(GO:0042441) pigment metabolic process involved in developmental pigmentation(GO:0043324) pigment metabolic process involved in pigmentation(GO:0043474)
0.0 0.1 GO:1990426 homologous recombination-dependent replication fork processing(GO:1990426)
0.0 0.1 GO:1990022 RNA polymerase II complex import to nucleus(GO:0044376) RNA polymerase III complex localization to nucleus(GO:1990022)
0.0 0.1 GO:0070327 thyroid hormone transport(GO:0070327)
0.0 0.2 GO:0032484 Ral protein signal transduction(GO:0032484) regulation of Ral protein signal transduction(GO:0032485)
0.0 0.2 GO:0006041 glucosamine metabolic process(GO:0006041)
0.0 0.9 GO:1901687 glutathione derivative metabolic process(GO:1901685) glutathione derivative biosynthetic process(GO:1901687)
0.0 0.1 GO:0043490 malate-aspartate shuttle(GO:0043490)
0.0 0.4 GO:0036148 phosphatidylglycerol acyl-chain remodeling(GO:0036148)
0.0 0.2 GO:0086024 adrenergic receptor signaling pathway involved in positive regulation of heart rate(GO:0086024)
0.0 0.2 GO:0010133 proline catabolic process to glutamate(GO:0010133)
0.0 0.2 GO:0010286 heat acclimation(GO:0010286) cellular heat acclimation(GO:0070370)
0.0 0.1 GO:0051780 mevalonate transport(GO:0015728) behavioral response to nutrient(GO:0051780)
0.0 0.6 GO:0045899 positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.0 0.1 GO:0031296 positive regulation of germinal center formation(GO:0002636) B cell costimulation(GO:0031296)
0.0 0.3 GO:0000722 telomere maintenance via recombination(GO:0000722)
0.0 0.3 GO:0031848 protection from non-homologous end joining at telomere(GO:0031848)
0.0 0.3 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.0 0.3 GO:0000492 box C/D snoRNP assembly(GO:0000492)
0.0 0.1 GO:0050917 sensory perception of umami taste(GO:0050917)
0.0 0.7 GO:0043252 sodium-independent organic anion transport(GO:0043252)
0.0 0.1 GO:1905098 negative regulation of guanyl-nucleotide exchange factor activity(GO:1905098)
0.0 0.4 GO:0007175 negative regulation of epidermal growth factor-activated receptor activity(GO:0007175)
0.0 0.1 GO:0019805 quinolinate biosynthetic process(GO:0019805)
0.0 0.4 GO:0002643 regulation of tolerance induction(GO:0002643)
0.0 0.1 GO:0000117 regulation of transcription involved in G2/M transition of mitotic cell cycle(GO:0000117)
0.0 0.2 GO:0051694 pointed-end actin filament capping(GO:0051694)
0.0 0.2 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.0 0.2 GO:1902570 protein localization to nucleolus(GO:1902570)
0.0 0.4 GO:0016180 snRNA processing(GO:0016180)
0.0 0.1 GO:0006499 N-terminal protein myristoylation(GO:0006499)
0.0 1.1 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.3 GO:0007620 copulation(GO:0007620)
0.0 0.1 GO:0042816 vitamin B6 metabolic process(GO:0042816)
0.0 0.1 GO:2000270 negative regulation of fibroblast apoptotic process(GO:2000270)
0.0 0.1 GO:0001880 Mullerian duct regression(GO:0001880)
0.0 0.2 GO:2000269 regulation of fibroblast apoptotic process(GO:2000269)
0.0 0.2 GO:0050713 negative regulation of interleukin-1 beta secretion(GO:0050713)
0.0 0.0 GO:0042264 peptidyl-aspartic acid hydroxylation(GO:0042264)
0.0 0.5 GO:0090383 phagosome acidification(GO:0090383)
0.0 0.1 GO:0033216 ferric iron import(GO:0033216)
0.0 0.2 GO:0007064 mitotic sister chromatid cohesion(GO:0007064)
0.0 0.3 GO:0006851 mitochondrial calcium ion transport(GO:0006851)
0.0 0.1 GO:0034447 very-low-density lipoprotein particle clearance(GO:0034447)
0.0 0.1 GO:0000389 mRNA 3'-splice site recognition(GO:0000389)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain(GO:0000221)
0.0 0.3 GO:0035061 interchromatin granule(GO:0035061)
0.0 0.3 GO:0005589 collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647)
0.0 0.6 GO:0031595 nuclear proteasome complex(GO:0031595)
0.0 0.2 GO:0031905 early endosome lumen(GO:0031905)
0.0 0.2 GO:0000444 MIS12/MIND type complex(GO:0000444)
0.0 0.4 GO:0070531 BRCA1-A complex(GO:0070531)
0.0 0.4 GO:0072687 meiotic spindle(GO:0072687)
0.0 0.5 GO:0005577 fibrinogen complex(GO:0005577)
0.0 0.3 GO:0031597 cytosolic proteasome complex(GO:0031597)
0.0 0.3 GO:0000125 PCAF complex(GO:0000125)
0.0 0.4 GO:0032039 integrator complex(GO:0032039)
0.0 0.5 GO:0030126 COPI vesicle coat(GO:0030126)
0.0 0.3 GO:0042382 paraspeckles(GO:0042382)
0.0 0.4 GO:0032591 dendritic spine membrane(GO:0032591)
0.0 0.2 GO:0070852 cell body fiber(GO:0070852)
0.0 0.3 GO:0000815 ESCRT III complex(GO:0000815)
0.0 1.1 GO:0005747 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.1 GO:0045180 basal cortex(GO:0045180)
0.0 0.1 GO:0016035 zeta DNA polymerase complex(GO:0016035)
0.0 0.3 GO:0017101 aminoacyl-tRNA synthetase multienzyme complex(GO:0017101)
0.0 0.4 GO:0035327 transcriptionally active chromatin(GO:0035327)
0.0 0.0 GO:0005602 complement component C1 complex(GO:0005602)
0.0 0.2 GO:0061700 GATOR2 complex(GO:0061700)
0.0 0.2 GO:0072559 NLRP3 inflammasome complex(GO:0072559)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.1 GO:0035800 deubiquitinase activator activity(GO:0035800)
0.1 0.3 GO:0031626 beta-endorphin binding(GO:0031626)
0.1 0.3 GO:0016603 glutaminyl-peptide cyclotransferase activity(GO:0016603)
0.1 0.6 GO:0047493 sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493)
0.1 0.2 GO:0030572 cardiolipin synthase activity(GO:0008808) phosphatidyltransferase activity(GO:0030572) CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase activity(GO:0043337)
0.1 0.2 GO:0019781 NEDD8 activating enzyme activity(GO:0019781)
0.1 0.2 GO:0061714 folic acid receptor activity(GO:0061714)
0.1 0.2 GO:0004823 glutamine-tRNA ligase activity(GO:0004819) leucine-tRNA ligase activity(GO:0004823)
0.1 0.2 GO:0048244 phytanoyl-CoA dioxygenase activity(GO:0048244)
0.1 0.6 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
0.0 0.2 GO:0004057 arginyltransferase activity(GO:0004057)
0.0 0.2 GO:0016263 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity(GO:0016263)
0.0 0.5 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.1 GO:0000224 peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity(GO:0000224)
0.0 0.2 GO:0004657 proline dehydrogenase activity(GO:0004657)
0.0 0.1 GO:0072545 tyrosine binding(GO:0072545)
0.0 0.3 GO:0030280 structural constituent of epidermis(GO:0030280)
0.0 0.1 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.0 0.2 GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds(GO:0016822) hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances(GO:0016823)
0.0 0.4 GO:0001730 2'-5'-oligoadenylate synthetase activity(GO:0001730)
0.0 0.1 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.0 0.2 GO:0035402 histone kinase activity (H3-T11 specific)(GO:0035402)
0.0 0.4 GO:0097100 supercoiled DNA binding(GO:0097100)
0.0 0.7 GO:0015125 bile acid transmembrane transporter activity(GO:0015125)
0.0 0.1 GO:0000035 acyl binding(GO:0000035)
0.0 0.1 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.0 0.2 GO:0032089 NACHT domain binding(GO:0032089)
0.0 0.2 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.0 0.1 GO:0015130 mevalonate transmembrane transporter activity(GO:0015130)
0.0 0.1 GO:0000386 second spliceosomal transesterification activity(GO:0000386)
0.0 0.3 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 0.9 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.3 GO:0001075 transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly(GO:0001075)
0.0 1.1 GO:0008137 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.1 GO:0030229 very-low-density lipoprotein particle receptor activity(GO:0030229)
0.0 0.3 GO:0000014 single-stranded DNA endodeoxyribonuclease activity(GO:0000014)
0.0 0.0 GO:0004597 peptide-aspartate beta-dioxygenase activity(GO:0004597)
0.0 0.2 GO:0031681 G-protein beta-subunit binding(GO:0031681)
0.0 0.1 GO:0015183 L-aspartate transmembrane transporter activity(GO:0015183)
0.0 0.4 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.2 GO:0047144 2-acylglycerol-3-phosphate O-acyltransferase activity(GO:0047144)
0.0 0.2 GO:0005542 folic acid binding(GO:0005542)
0.0 0.0 GO:0005415 nucleoside:sodium symporter activity(GO:0005415)
0.0 0.1 GO:0052851 cupric reductase activity(GO:0008823) ferric-chelate reductase (NADPH) activity(GO:0052851)
0.0 0.2 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.2 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.0 0.6 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.0 0.1 GO:0015265 urea channel activity(GO:0015265)
0.0 0.5 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.
0.0 0.7 PID BARD1 PATHWAY BARD1 signaling events

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.1 REACTOME TRAF6 MEDIATED IRF7 ACTIVATION Genes involved in TRAF6 mediated IRF7 activation
0.0 0.4 REACTOME APOBEC3G MEDIATED RESISTANCE TO HIV1 INFECTION Genes involved in APOBEC3G mediated resistance to HIV-1 infection
0.0 0.7 REACTOME RECYCLING OF BILE ACIDS AND SALTS Genes involved in Recycling of bile acids and salts
0.0 0.4 REACTOME ACYL CHAIN REMODELLING OF PG Genes involved in Acyl chain remodelling of PG
0.0 0.4 REACTOME COPI MEDIATED TRANSPORT Genes involved in COPI Mediated Transport
0.0 0.5 REACTOME COMMON PATHWAY Genes involved in Common Pathway
0.0 0.2 REACTOME ENDOSOMAL VACUOLAR PATHWAY Genes involved in Endosomal/Vacuolar pathway
0.0 0.9 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.0 0.8 REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha
0.0 0.5 REACTOME INSULIN RECEPTOR RECYCLING Genes involved in Insulin receptor recycling
0.0 0.3 REACTOME CS DS DEGRADATION Genes involved in CS/DS degradation
0.0 0.5 REACTOME ZINC TRANSPORTERS Genes involved in Zinc transporters
0.0 0.3 REACTOME TRYPTOPHAN CATABOLISM Genes involved in Tryptophan catabolism
0.0 0.2 REACTOME SYNTHESIS OF SUBSTRATES IN N GLYCAN BIOSYTHESIS Genes involved in Synthesis of substrates in N-glycan biosythesis