A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HOXC8 | hg19_v2_chr12_+_54402790_54402832 | -0.31 | 5.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_187371440 Show fit | 1.33 |
ENST00000445547.1
|
zinc finger CCCH-type containing 15 |
|
chr3_-_129375556 Show fit | 1.18 |
ENST00000510323.1
|
transmembrane and coiled-coil domain family 1 |
|
chr4_-_112993808 Show fit | 1.04 |
ENST00000511219.1
|
RP11-269F21.3 |
|
chr14_+_20187174 Show fit | 0.83 |
ENST00000557414.1
|
olfactory receptor, family 4, subfamily N, member 2 |
|
chr8_-_90993869 Show fit | 0.78 |
ENST00000517772.1
|
nibrin |
|
chr20_+_52824367 Show fit | 0.74 |
ENST00000371419.2
|
prefoldin subunit 4 |
|
chr17_-_38821373 Show fit | 0.72 |
ENST00000394052.3
|
keratin 222 |
|
chr1_+_76251912 Show fit | 0.72 |
ENST00000370826.3
|
Rab geranylgeranyltransferase, beta subunit |
|
chr21_-_30365136 Show fit | 0.68 |
ENST00000361371.5
ENST00000389194.2 ENST00000389195.2 |
listerin E3 ubiquitin protein ligase 1 |
|
chr8_-_27695552 Show fit | 0.66 |
ENST00000522944.1
ENST00000301905.4 |
PDZ binding kinase |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.8 | GO:0045071 | negative regulation of viral genome replication(GO:0045071) |
0.1 | 1.2 | GO:0018344 | protein geranylgeranylation(GO:0018344) |
0.2 | 1.1 | GO:0031860 | telomeric 3' overhang formation(GO:0031860) |
0.1 | 1.1 | GO:1905066 | regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment(GO:1901295) regulation of canonical Wnt signaling pathway involved in heart development(GO:1905066) |
0.0 | 1.1 | GO:0008334 | histone mRNA metabolic process(GO:0008334) |
0.0 | 1.1 | GO:0000413 | protein peptidyl-prolyl isomerization(GO:0000413) |
0.0 | 1.1 | GO:0006958 | complement activation, classical pathway(GO:0006958) |
0.0 | 1.1 | GO:0007029 | endoplasmic reticulum organization(GO:0007029) |
0.1 | 1.0 | GO:0014038 | regulation of Schwann cell differentiation(GO:0014038) |
0.1 | 1.0 | GO:2000158 | positive regulation of ubiquitin-specific protease activity(GO:2000158) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.8 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 1.8 | GO:0005782 | peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907) |
0.2 | 1.2 | GO:0005968 | Rab-protein geranylgeranyltransferase complex(GO:0005968) |
0.0 | 1.1 | GO:0042645 | nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645) |
0.2 | 1.0 | GO:0005958 | DNA-dependent protein kinase-DNA ligase 4 complex(GO:0005958) |
0.1 | 1.0 | GO:0030870 | Mre11 complex(GO:0030870) |
0.0 | 1.0 | GO:0030990 | intraciliary transport particle(GO:0030990) |
0.2 | 0.9 | GO:0042721 | mitochondrial inner membrane protein insertion complex(GO:0042721) |
0.2 | 0.9 | GO:0097125 | cyclin B1-CDK1 complex(GO:0097125) |
0.1 | 0.9 | GO:0002193 | MAML1-RBP-Jkappa- ICN1 complex(GO:0002193) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.1 | GO:0001730 | 2'-5'-oligoadenylate synthetase activity(GO:0001730) |
0.0 | 2.1 | GO:0051087 | chaperone binding(GO:0051087) |
0.0 | 1.6 | GO:0008137 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
0.0 | 1.3 | GO:0001972 | retinoic acid binding(GO:0001972) |
0.2 | 1.2 | GO:0004663 | Rab geranylgeranyltransferase activity(GO:0004663) |
0.0 | 1.1 | GO:0008353 | RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353) |
0.0 | 1.1 | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity(GO:0003755) |
0.1 | 1.0 | GO:0035800 | deubiquitinase activator activity(GO:0035800) |
0.0 | 0.9 | GO:0017147 | Wnt-protein binding(GO:0017147) |
0.0 | 0.9 | GO:0003950 | NAD+ ADP-ribosyltransferase activity(GO:0003950) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.2 | PID ATM PATHWAY | ATM pathway |
0.0 | 1.3 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
0.0 | 1.2 | PID NOTCH PATHWAY | Notch signaling pathway |
0.0 | 1.1 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.1 | 0.9 | SA G2 AND M PHASES | Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. |
0.0 | 0.7 | PID MYC PATHWAY | C-MYC pathway |
0.0 | 0.5 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.0 | 0.4 | PID RANBP2 PATHWAY | Sumoylation by RanBP2 regulates transcriptional repression |
0.0 | 0.1 | PID AR NONGENOMIC PATHWAY | Nongenotropic Androgen signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.4 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.0 | 1.3 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |
0.1 | 1.1 | REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION | Genes involved in E2F-enabled inhibition of pre-replication complex formation |
0.1 | 1.0 | REACTOME INTEGRATION OF PROVIRUS | Genes involved in Integration of provirus |
0.0 | 1.0 | REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS | Genes involved in Homologous recombination repair of replication-independent double-strand breaks |
0.0 | 0.9 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 7ALPHA HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol |
0.0 | 0.9 | REACTOME CYTOSOLIC TRNA AMINOACYLATION | Genes involved in Cytosolic tRNA aminoacylation |
0.0 | 0.8 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |
0.0 | 0.8 | REACTOME MITOCHONDRIAL PROTEIN IMPORT | Genes involved in Mitochondrial Protein Import |
0.0 | 0.7 | REACTOME NOTCH HLH TRANSCRIPTION PATHWAY | Genes involved in Notch-HLH transcription pathway |