A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
GLIS2 | hg19_v2_chr16_+_4382225_4382225 | -0.35 | 5.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_615942 Show fit | 2.47 |
ENST00000397562.3
ENST00000330243.5 ENST00000397570.1 ENST00000397574.2 |
interferon regulatory factor 7 |
|
chr11_-_615570 Show fit | 2.11 |
ENST00000525445.1
ENST00000348655.6 ENST00000397566.1 |
interferon regulatory factor 7 |
|
chr17_+_41158742 Show fit | 1.57 |
ENST00000415816.2
ENST00000438323.2 |
interferon-induced protein 35 |
|
chr19_-_55669093 Show fit | 1.34 |
ENST00000344887.5
|
troponin I type 3 (cardiac) |
|
chr20_-_62203808 Show fit | 1.23 |
ENST00000467148.1
|
helicase with zinc finger 2, transcriptional coactivator |
|
chr19_+_55795493 Show fit | 1.23 |
ENST00000309383.1
|
BR serine/threonine kinase 1 |
|
chr1_-_156675564 Show fit | 0.90 |
ENST00000368220.1
|
cellular retinoic acid binding protein 2 |
|
chr17_+_41177220 Show fit | 0.86 |
ENST00000587250.2
ENST00000544533.1 |
Rho family GTPase 2 |
|
chr11_-_627143 Show fit | 0.65 |
ENST00000176195.3
|
secretin |
|
chr5_+_172484377 Show fit | 0.64 |
ENST00000523161.1
|
CREB3 regulatory factor |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.6 | 4.9 | GO:0034124 | regulation of MyD88-dependent toll-like receptor signaling pathway(GO:0034124) |
0.2 | 2.9 | GO:0048672 | positive regulation of collateral sprouting(GO:0048672) |
0.1 | 1.9 | GO:0032780 | negative regulation of ATPase activity(GO:0032780) |
0.0 | 1.3 | GO:0031572 | G2 DNA damage checkpoint(GO:0031572) |
0.1 | 1.2 | GO:0010459 | negative regulation of heart rate(GO:0010459) |
0.0 | 0.8 | GO:0070986 | left/right axis specification(GO:0070986) |
0.1 | 0.7 | GO:0060154 | cellular process regulating host cell cycle in response to virus(GO:0060154) |
0.2 | 0.6 | GO:0090273 | regulation of somatostatin secretion(GO:0090273) positive regulation of somatostatin secretion(GO:0090274) |
0.2 | 0.6 | GO:0051102 | DNA ligation involved in DNA recombination(GO:0051102) |
0.1 | 0.6 | GO:0038161 | prolactin signaling pathway(GO:0038161) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 1.9 | GO:1990584 | cardiac Troponin complex(GO:1990584) |
0.0 | 1.1 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.0 | 1.0 | GO:0030992 | intraciliary transport particle B(GO:0030992) |
0.0 | 0.9 | GO:0002080 | acrosomal membrane(GO:0002080) |
0.0 | 0.8 | GO:0035098 | ESC/E(Z) complex(GO:0035098) |
0.0 | 0.7 | GO:0097136 | Bcl-2 family protein complex(GO:0097136) |
0.1 | 0.6 | GO:0008537 | proteasome activator complex(GO:0008537) |
0.1 | 0.6 | GO:0005958 | DNA-dependent protein kinase-DNA ligase 4 complex(GO:0005958) |
0.1 | 0.6 | GO:0016272 | prefoldin complex(GO:0016272) |
0.0 | 0.6 | GO:0044300 | cerebellar mossy fiber(GO:0044300) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.8 | GO:0000979 | RNA polymerase II core promoter sequence-specific DNA binding(GO:0000979) |
0.1 | 2.5 | GO:0019841 | retinol binding(GO:0019841) |
0.5 | 1.9 | GO:0030172 | troponin C binding(GO:0030172) |
0.0 | 1.4 | GO:0030374 | ligand-dependent nuclear receptor transcription coactivator activity(GO:0030374) |
0.0 | 1.3 | GO:0050321 | tau-protein kinase activity(GO:0050321) |
0.2 | 1.2 | GO:0005219 | ryanodine-sensitive calcium-release channel activity(GO:0005219) |
0.0 | 1.1 | GO:0031491 | nucleosome binding(GO:0031491) |
0.1 | 0.7 | GO:0051434 | BH3 domain binding(GO:0051434) |
0.1 | 0.6 | GO:0061133 | endopeptidase activator activity(GO:0061133) |
0.1 | 0.6 | GO:0060228 | phosphatidylcholine-sterol O-acyltransferase activator activity(GO:0060228) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.0 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.0 | 1.3 | PID LKB1 PATHWAY | LKB1 signaling events |
0.0 | 0.5 | SA PROGRAMMED CELL DEATH | Programmed cell death, or apoptosis, eliminates damaged or unneeded cells. |
0.0 | 0.5 | PID DNA PK PATHWAY | DNA-PK pathway in nonhomologous end joining |
0.0 | 0.5 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.0 | 0.4 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 4.6 | REACTOME TRAF6 MEDIATED IRF7 ACTIVATION IN TLR7 8 OR 9 SIGNALING | Genes involved in TRAF6 mediated IRF7 activation in TLR7/8 or 9 signaling |
0.0 | 2.0 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 1.5 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.0 | 1.1 | REACTOME SCF BETA TRCP MEDIATED DEGRADATION OF EMI1 | Genes involved in SCF-beta-TrCP mediated degradation of Emi1 |
0.0 | 0.9 | REACTOME INFLAMMASOMES | Genes involved in Inflammasomes |
0.0 | 0.8 | REACTOME GLUCAGON TYPE LIGAND RECEPTORS | Genes involved in Glucagon-type ligand receptors |
0.0 | 0.6 | REACTOME INTEGRATION OF PROVIRUS | Genes involved in Integration of provirus |
0.0 | 0.6 | REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS | Genes involved in Synthesis of very long-chain fatty acyl-CoAs |
0.0 | 0.6 | REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC | Genes involved in Prefoldin mediated transfer of substrate to CCT/TriC |
0.0 | 0.5 | REACTOME INITIAL TRIGGERING OF COMPLEMENT | Genes involved in Initial triggering of complement |