A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
CDC5L | hg19_v2_chr6_+_44355257_44355315 | 0.80 | 5.4e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_+_91152303 Show fit | 5.41 |
ENST00000371804.3
|
interferon-induced protein with tetratricopeptide repeats 1 |
|
chr4_+_155484155 Show fit | 1.32 |
ENST00000509493.1
|
fibrinogen beta chain |
|
chr3_-_122283424 Show fit | 1.19 |
ENST00000477522.2
ENST00000360356.2 |
poly (ADP-ribose) polymerase family, member 9 |
|
chr15_-_42076229 Show fit | 1.19 |
ENST00000597767.1
|
Uncharacterized protein |
|
chr4_+_155484103 Show fit | 1.16 |
ENST00000302068.4
|
fibrinogen beta chain |
|
chr22_-_40929812 Show fit | 0.95 |
ENST00000422851.1
|
megakaryoblastic leukemia (translocation) 1 |
|
chr2_+_228678550 Show fit | 0.90 |
ENST00000409189.3
ENST00000358813.4 |
chemokine (C-C motif) ligand 20 |
|
chr4_+_80584903 Show fit | 0.87 |
ENST00000506460.1
|
RP11-452C8.1 |
|
chr1_+_196621002 Show fit | 0.86 |
ENST00000367429.4
ENST00000439155.2 |
complement factor H |
|
chr18_+_61442629 Show fit | 0.83 |
ENST00000398019.2
ENST00000540675.1 |
serpin peptidase inhibitor, clade B (ovalbumin), member 7 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 5.4 | GO:0051097 | negative regulation of helicase activity(GO:0051097) |
0.2 | 2.5 | GO:0043152 | induction of bacterial agglutination(GO:0043152) |
0.1 | 1.4 | GO:0006957 | complement activation, alternative pathway(GO:0006957) |
0.1 | 1.2 | GO:0070212 | protein poly-ADP-ribosylation(GO:0070212) |
0.2 | 1.1 | GO:0090362 | positive regulation of platelet-derived growth factor production(GO:0090362) |
0.1 | 1.1 | GO:1905150 | regulation of voltage-gated sodium channel activity(GO:1905150) |
0.3 | 1.0 | GO:1901896 | positive regulation of calcium-transporting ATPase activity(GO:1901896) |
0.3 | 0.9 | GO:0045362 | interleukin-1 biosynthetic process(GO:0042222) regulation of interleukin-1 biosynthetic process(GO:0045360) positive regulation of interleukin-1 biosynthetic process(GO:0045362) |
0.2 | 0.9 | GO:0051083 | 'de novo' cotranslational protein folding(GO:0051083) |
0.1 | 0.9 | GO:0010735 | positive regulation of transcription via serum response element binding(GO:0010735) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.7 | GO:0043657 | host(GO:0018995) host cell(GO:0043657) |
0.2 | 2.6 | GO:0005577 | fibrinogen complex(GO:0005577) |
0.0 | 1.9 | GO:0005790 | smooth endoplasmic reticulum(GO:0005790) |
0.0 | 1.8 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.2 | 1.0 | GO:0031510 | SUMO activating enzyme complex(GO:0031510) |
0.1 | 0.9 | GO:0097442 | CA3 pyramidal cell dendrite(GO:0097442) |
0.0 | 0.9 | GO:0071782 | endoplasmic reticulum tubular network(GO:0071782) |
0.0 | 0.9 | GO:0001533 | cornified envelope(GO:0001533) |
0.1 | 0.7 | GO:0044530 | supraspliceosomal complex(GO:0044530) |
0.1 | 0.7 | GO:0031467 | Cul7-RING ubiquitin ligase complex(GO:0031467) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.8 | GO:0051087 | chaperone binding(GO:0051087) |
0.1 | 1.4 | GO:0043395 | heparan sulfate proteoglycan binding(GO:0043395) |
0.1 | 1.2 | GO:0043522 | leucine zipper domain binding(GO:0043522) |
0.1 | 1.0 | GO:0044388 | small protein activating enzyme binding(GO:0044388) |
0.0 | 1.0 | GO:0019003 | GDP binding(GO:0019003) |
0.3 | 0.9 | GO:0031731 | CCR6 chemokine receptor binding(GO:0031731) |
0.1 | 0.9 | GO:0061649 | ubiquitinated histone binding(GO:0061649) |
0.0 | 0.9 | GO:0070403 | NAD+ binding(GO:0070403) |
0.1 | 0.7 | GO:0003726 | double-stranded RNA adenosine deaminase activity(GO:0003726) |
0.0 | 0.7 | GO:1904264 | ubiquitin protein ligase activity involved in ERAD pathway(GO:1904264) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.4 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.0 | 1.2 | PID ATM PATHWAY | ATM pathway |
0.1 | 1.1 | PID RANBP2 PATHWAY | Sumoylation by RanBP2 regulates transcriptional repression |
0.0 | 0.9 | PID BETA CATENIN DEG PATHWAY | Degradation of beta catenin |
0.0 | 0.8 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.0 | 0.8 | PID RHOA PATHWAY | RhoA signaling pathway |
0.0 | 0.6 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.0 | 0.5 | PID SYNDECAN 3 PATHWAY | Syndecan-3-mediated signaling events |
0.0 | 0.5 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.0 | 0.5 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.5 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.1 | 2.5 | REACTOME COMMON PATHWAY | Genes involved in Common Pathway |
0.0 | 1.6 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.1 | 1.0 | REACTOME REGULATION OF IFNG SIGNALING | Genes involved in Regulation of IFNG signaling |
0.0 | 0.9 | REACTOME PACKAGING OF TELOMERE ENDS | Genes involved in Packaging Of Telomere Ends |
0.0 | 0.8 | REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION | Genes involved in Apoptosis induced DNA fragmentation |
0.0 | 0.8 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |
0.0 | 0.8 | REACTOME INWARDLY RECTIFYING K CHANNELS | Genes involved in Inwardly rectifying K+ channels |
0.0 | 0.8 | REACTOME IL1 SIGNALING | Genes involved in Interleukin-1 signaling |
0.0 | 0.7 | REACTOME PROLACTIN RECEPTOR SIGNALING | Genes involved in Prolactin receptor signaling |