A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NFE2L2 | hg19_v2_chr2_-_178257401_178257432 | -0.84 | 3.8e-02 | Click! |
BACH1 | hg19_v2_chr21_+_30671189_30671207 | -0.77 | 7.2e-02 | Click! |
NFE2 | hg19_v2_chr12_-_54694758_54694805 | -0.42 | 4.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr16_-_1429010 Show fit | 2.75 |
ENST00000513783.1
|
unkempt family zinc finger-like |
|
chr4_+_22999152 Show fit | 1.56 |
ENST00000511453.1
|
RP11-412P11.1 |
|
chr5_+_35852797 Show fit | 1.49 |
ENST00000508941.1
|
interleukin 7 receptor |
|
chr11_+_62475130 Show fit | 0.90 |
ENST00000294117.5
|
guanine nucleotide binding protein (G protein), gamma 3 |
|
chr16_+_83986827 Show fit | 0.83 |
ENST00000393306.1
ENST00000565123.1 |
oxidative stress induced growth inhibitor 1 |
|
chr16_-_1429627 Show fit | 0.79 |
ENST00000248104.7
|
unkempt family zinc finger-like |
|
chr5_+_179247759 Show fit | 0.79 |
ENST00000389805.4
ENST00000504627.1 ENST00000402874.3 ENST00000510187.1 |
sequestosome 1 |
|
chr16_+_30077098 Show fit | 0.79 |
ENST00000395240.3
ENST00000566846.1 |
aldolase A, fructose-bisphosphate |
|
chr4_-_987164 Show fit | 0.75 |
ENST00000398520.2
|
solute carrier family 26 (anion exchanger), member 1 |
|
chr10_-_71892555 Show fit | 0.72 |
ENST00000307864.1
|
apoptosis-inducing factor, mitochondrion-associated, 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.6 | GO:0006995 | cellular response to nitrogen starvation(GO:0006995) cellular response to nitrogen levels(GO:0043562) |
0.1 | 1.5 | GO:0001915 | negative regulation of T cell mediated cytotoxicity(GO:0001915) |
0.1 | 1.3 | GO:0030388 | fructose 1,6-bisphosphate metabolic process(GO:0030388) |
0.1 | 1.1 | GO:0034036 | purine ribonucleoside bisphosphate biosynthetic process(GO:0034036) 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process(GO:0050428) |
0.1 | 1.0 | GO:0010499 | proteasomal ubiquitin-independent protein catabolic process(GO:0010499) |
0.0 | 0.9 | GO:0071377 | cellular response to glucagon stimulus(GO:0071377) |
0.0 | 0.9 | GO:0070423 | nucleotide-binding oligomerization domain containing signaling pathway(GO:0070423) |
0.0 | 0.8 | GO:0061635 | regulation of protein complex stability(GO:0061635) |
0.0 | 0.8 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
0.2 | 0.6 | GO:0061433 | cellular response to caloric restriction(GO:0061433) negative regulation of oligodendrocyte progenitor proliferation(GO:0070446) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.8 | GO:0031430 | M band(GO:0031430) |
0.0 | 1.6 | GO:0032590 | dendrite membrane(GO:0032590) |
0.0 | 1.2 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
0.0 | 0.9 | GO:0008385 | IkappaB kinase complex(GO:0008385) |
0.2 | 0.8 | GO:0044753 | amphisome(GO:0044753) |
0.1 | 0.6 | GO:0032437 | cuticular plate(GO:0032437) |
0.1 | 0.6 | GO:0072687 | meiotic spindle(GO:0072687) |
0.0 | 0.6 | GO:0043190 | ATP-binding cassette (ABC) transporter complex(GO:0043190) |
0.0 | 0.6 | GO:0005640 | nuclear outer membrane(GO:0005640) |
0.2 | 0.5 | GO:0097057 | TRAF2-GSTP1 complex(GO:0097057) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.2 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.1 | 1.6 | GO:0030957 | Tat protein binding(GO:0030957) |
0.4 | 1.5 | GO:0004917 | interleukin-7 receptor activity(GO:0004917) |
0.1 | 1.3 | GO:0004332 | fructose-bisphosphate aldolase activity(GO:0004332) |
0.1 | 1.1 | GO:0019531 | oxalate transmembrane transporter activity(GO:0019531) |
0.2 | 0.9 | GO:1990450 | linear polyubiquitin binding(GO:1990450) |
0.0 | 0.9 | GO:0031702 | type 1 angiotensin receptor binding(GO:0031702) |
0.0 | 0.8 | GO:0070530 | K63-linked polyubiquitin binding(GO:0070530) |
0.2 | 0.7 | GO:0016649 | electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649) |
0.0 | 0.7 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.0 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.0 | 1.9 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.0 | 0.9 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 0.5 | PID S1P S1P1 PATHWAY | S1P1 pathway |
0.0 | 0.3 | PID AP1 PATHWAY | AP-1 transcription factor network |
0.0 | 0.3 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 0.2 | PID IL5 PATHWAY | IL5-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.6 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.1 | 1.5 | REACTOME IL 7 SIGNALING | Genes involved in Interleukin-7 signaling |
0.1 | 1.1 | REACTOME NFKB IS ACTIVATED AND SIGNALS SURVIVAL | Genes involved in NF-kB is activated and signals survival |
0.0 | 1.1 | REACTOME METABOLISM OF PORPHYRINS | Genes involved in Metabolism of porphyrins |
0.0 | 1.1 | REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY | Genes involved in Post-chaperonin tubulin folding pathway |
0.1 | 0.9 | REACTOME IRAK1 RECRUITS IKK COMPLEX | Genes involved in IRAK1 recruits IKK complex |
0.0 | 0.9 | REACTOME G BETA GAMMA SIGNALLING THROUGH PLC BETA | Genes involved in G beta:gamma signalling through PLC beta |
0.0 | 0.8 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.0 | 0.7 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.0 | 0.6 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |