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A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
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Results for ACUGGCC
Z-value: 0.19
Motif logo
miRNA associated with seed ACUGGCC
| Name | miRBASE accession |
|---|---|
|
hsa-miR-193a-3p
|
MIMAT0000459 |
|
hsa-miR-193b-3p
|
MIMAT0002819 |
Activity profile of ACUGGCC motif
Sorted Z-values of ACUGGCC motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr15_+_44719394 | 0.09 |
ENST00000260327.4
ENST00000396780.1 |
CTDSPL2
|
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 |
| chr3_-_57199397 | 0.06 |
ENST00000296318.7
|
IL17RD
|
interleukin 17 receptor D |
| chr10_-_94333784 | 0.06 |
ENST00000265986.6
|
IDE
|
insulin-degrading enzyme |
| chr6_-_75994536 | 0.05 |
ENST00000475111.2
ENST00000230461.6 |
TMEM30A
|
transmembrane protein 30A |
| chr9_-_3525968 | 0.05 |
ENST00000382004.3
ENST00000302303.1 ENST00000449190.1 |
RFX3
|
regulatory factor X, 3 (influences HLA class II expression) |
| chr17_+_68165657 | 0.05 |
ENST00000243457.3
|
KCNJ2
|
potassium inwardly-rectifying channel, subfamily J, member 2 |
| chr5_-_133512683 | 0.05 |
ENST00000353411.6
|
SKP1
|
S-phase kinase-associated protein 1 |
| chr14_-_50698276 | 0.05 |
ENST00000216373.5
|
SOS2
|
son of sevenless homolog 2 (Drosophila) |
| chr12_+_79258547 | 0.04 |
ENST00000457153.2
|
SYT1
|
synaptotagmin I |
| chr7_-_26904317 | 0.04 |
ENST00000345317.2
|
SKAP2
|
src kinase associated phosphoprotein 2 |
| chr6_-_166075557 | 0.04 |
ENST00000539869.2
ENST00000366882.1 |
PDE10A
|
phosphodiesterase 10A |
| chr18_-_47013586 | 0.04 |
ENST00000318240.3
ENST00000579820.1 |
C18orf32
|
chromosome 18 open reading frame 32 |
| chr8_-_101965146 | 0.04 |
ENST00000395957.2
ENST00000395948.2 ENST00000457309.1 |
YWHAZ
|
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta |
| chr8_+_110552337 | 0.04 |
ENST00000337573.5
|
EBAG9
|
estrogen receptor binding site associated, antigen, 9 |
| chr7_+_108210012 | 0.04 |
ENST00000249356.3
|
DNAJB9
|
DnaJ (Hsp40) homolog, subfamily B, member 9 |
| chr1_+_218519577 | 0.04 |
ENST00000366930.4
ENST00000366929.4 |
TGFB2
|
transforming growth factor, beta 2 |
| chr6_+_86159821 | 0.04 |
ENST00000369651.3
|
NT5E
|
5'-nucleotidase, ecto (CD73) |
| chr11_+_34073195 | 0.04 |
ENST00000341394.4
|
CAPRIN1
|
cell cycle associated protein 1 |
| chr19_+_33166313 | 0.04 |
ENST00000334176.3
|
RGS9BP
|
regulator of G protein signaling 9 binding protein |
| chr20_-_14318248 | 0.03 |
ENST00000378053.3
ENST00000341420.4 |
FLRT3
|
fibronectin leucine rich transmembrane protein 3 |
| chr3_-_128902729 | 0.03 |
ENST00000451728.2
ENST00000446936.2 ENST00000502976.1 ENST00000500450.2 ENST00000441626.2 |
CNBP
|
CCHC-type zinc finger, nucleic acid binding protein |
| chr10_+_70480963 | 0.03 |
ENST00000265872.6
ENST00000535016.1 ENST00000538031.1 ENST00000543719.1 ENST00000539539.1 ENST00000543225.1 ENST00000536012.1 ENST00000494903.2 |
CCAR1
|
cell division cycle and apoptosis regulator 1 |
| chr14_+_57046500 | 0.03 |
ENST00000261556.6
|
TMEM260
|
transmembrane protein 260 |
| chr2_+_176957619 | 0.03 |
ENST00000392539.3
|
HOXD13
|
homeobox D13 |
| chr8_-_66546439 | 0.03 |
ENST00000276569.3
|
ARMC1
|
armadillo repeat containing 1 |
| chr5_+_78532003 | 0.03 |
ENST00000396137.4
|
JMY
|
junction mediating and regulatory protein, p53 cofactor |
| chr5_+_179921430 | 0.03 |
ENST00000393356.1
|
CNOT6
|
CCR4-NOT transcription complex, subunit 6 |
| chr17_-_66287257 | 0.03 |
ENST00000327268.4
|
SLC16A6
|
solute carrier family 16, member 6 |
| chr11_-_77532050 | 0.03 |
ENST00000308488.6
|
RSF1
|
remodeling and spacing factor 1 |
| chr3_-_176914238 | 0.03 |
ENST00000430069.1
ENST00000428970.1 |
TBL1XR1
|
transducin (beta)-like 1 X-linked receptor 1 |
| chr10_-_38146510 | 0.03 |
ENST00000395867.3
|
ZNF248
|
zinc finger protein 248 |
| chr2_+_48541776 | 0.03 |
ENST00000413569.1
ENST00000340553.3 |
FOXN2
|
forkhead box N2 |
| chr2_+_139259324 | 0.03 |
ENST00000280098.4
|
SPOPL
|
speckle-type POZ protein-like |
| chr4_+_41992489 | 0.03 |
ENST00000264451.7
|
SLC30A9
|
solute carrier family 30 (zinc transporter), member 9 |
| chrX_-_24045303 | 0.02 |
ENST00000328046.8
|
KLHL15
|
kelch-like family member 15 |
| chr4_-_105416039 | 0.02 |
ENST00000394767.2
|
CXXC4
|
CXXC finger protein 4 |
| chr2_-_161350305 | 0.02 |
ENST00000348849.3
|
RBMS1
|
RNA binding motif, single stranded interacting protein 1 |
| chr1_-_26232951 | 0.02 |
ENST00000426559.2
ENST00000455785.2 |
STMN1
|
stathmin 1 |
| chr2_+_12857015 | 0.02 |
ENST00000155926.4
|
TRIB2
|
tribbles pseudokinase 2 |
| chr1_+_76540386 | 0.02 |
ENST00000328299.3
|
ST6GALNAC3
|
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
| chr3_-_131221790 | 0.02 |
ENST00000512877.1
ENST00000264995.3 ENST00000511168.1 ENST00000425847.2 |
MRPL3
|
mitochondrial ribosomal protein L3 |
| chr21_-_16437255 | 0.02 |
ENST00000400199.1
ENST00000400202.1 |
NRIP1
|
nuclear receptor interacting protein 1 |
| chr14_+_102228123 | 0.02 |
ENST00000422945.2
ENST00000554442.1 ENST00000556260.2 ENST00000328724.5 ENST00000557268.1 |
PPP2R5C
|
protein phosphatase 2, regulatory subunit B', gamma |
| chr5_+_172483347 | 0.02 |
ENST00000522692.1
ENST00000296953.2 ENST00000540014.1 ENST00000520420.1 |
CREBRF
|
CREB3 regulatory factor |
| chr17_+_44668035 | 0.02 |
ENST00000398238.4
ENST00000225282.8 |
NSF
|
N-ethylmaleimide-sensitive factor |
| chr5_+_38846101 | 0.02 |
ENST00000274276.3
|
OSMR
|
oncostatin M receptor |
| chr4_-_23891693 | 0.02 |
ENST00000264867.2
|
PPARGC1A
|
peroxisome proliferator-activated receptor gamma, coactivator 1 alpha |
| chr7_-_14029515 | 0.02 |
ENST00000430479.1
ENST00000405218.2 ENST00000343495.5 |
ETV1
|
ets variant 1 |
| chr11_-_27494279 | 0.02 |
ENST00000379214.4
|
LGR4
|
leucine-rich repeat containing G protein-coupled receptor 4 |
| chr13_-_99404875 | 0.02 |
ENST00000376503.5
|
SLC15A1
|
solute carrier family 15 (oligopeptide transporter), member 1 |
| chr11_+_120207787 | 0.02 |
ENST00000397843.2
ENST00000356641.3 |
ARHGEF12
|
Rho guanine nucleotide exchange factor (GEF) 12 |
| chr3_+_132136331 | 0.02 |
ENST00000260818.6
|
DNAJC13
|
DnaJ (Hsp40) homolog, subfamily C, member 13 |
| chr1_+_111991474 | 0.02 |
ENST00000369722.3
|
ATP5F1
|
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1 |
| chr4_+_55524085 | 0.02 |
ENST00000412167.2
ENST00000288135.5 |
KIT
|
v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog |
| chr2_-_206950781 | 0.02 |
ENST00000403263.1
|
INO80D
|
INO80 complex subunit D |
| chr3_-_33481835 | 0.02 |
ENST00000283629.3
|
UBP1
|
upstream binding protein 1 (LBP-1a) |
| chrX_-_80065146 | 0.01 |
ENST00000373275.4
|
BRWD3
|
bromodomain and WD repeat domain containing 3 |
| chr10_-_99052382 | 0.01 |
ENST00000453547.2
ENST00000316676.8 ENST00000358308.3 ENST00000466484.1 ENST00000358531.4 |
ARHGAP19-SLIT1
ARHGAP19
|
ARHGAP19-SLIT1 readthrough (NMD candidate) Rho GTPase activating protein 19 |
| chr5_-_124080203 | 0.01 |
ENST00000504926.1
|
ZNF608
|
zinc finger protein 608 |
| chr2_+_14772810 | 0.01 |
ENST00000295092.2
ENST00000331243.4 |
FAM84A
|
family with sequence similarity 84, member A |
| chr7_-_143059845 | 0.01 |
ENST00000443739.2
|
FAM131B
|
family with sequence similarity 131, member B |
| chr12_-_25403737 | 0.01 |
ENST00000256078.4
ENST00000556131.1 ENST00000311936.3 ENST00000557334.1 |
KRAS
|
Kirsten rat sarcoma viral oncogene homolog |
| chr12_+_68042495 | 0.01 |
ENST00000344096.3
|
DYRK2
|
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 |
| chr12_-_42538657 | 0.01 |
ENST00000398675.3
|
GXYLT1
|
glucoside xylosyltransferase 1 |
| chr17_-_65241281 | 0.01 |
ENST00000358691.5
ENST00000580168.1 |
HELZ
|
helicase with zinc finger |
| chr12_-_50297638 | 0.01 |
ENST00000320634.3
|
FAIM2
|
Fas apoptotic inhibitory molecule 2 |
| chr12_-_111021110 | 0.01 |
ENST00000354300.3
|
PPTC7
|
PTC7 protein phosphatase homolog (S. cerevisiae) |
| chr5_+_65222299 | 0.01 |
ENST00000284037.5
|
ERBB2IP
|
erbb2 interacting protein |
| chr3_-_107809816 | 0.01 |
ENST00000361309.5
ENST00000355354.7 |
CD47
|
CD47 molecule |
| chr14_-_80677970 | 0.01 |
ENST00000438257.4
|
DIO2
|
deiodinase, iodothyronine, type II |
| chr8_-_95961578 | 0.01 |
ENST00000448464.2
ENST00000342697.4 |
TP53INP1
|
tumor protein p53 inducible nuclear protein 1 |
| chr2_-_208030647 | 0.01 |
ENST00000309446.6
|
KLF7
|
Kruppel-like factor 7 (ubiquitous) |
| chr12_+_56137064 | 0.01 |
ENST00000257868.5
ENST00000546799.1 |
GDF11
|
growth differentiation factor 11 |
| chr1_+_203764742 | 0.01 |
ENST00000432282.1
ENST00000453771.1 ENST00000367214.1 ENST00000367212.3 ENST00000332127.4 |
ZC3H11A
|
zinc finger CCCH-type containing 11A |
| chr12_-_104234966 | 0.01 |
ENST00000392876.3
|
NT5DC3
|
5'-nucleotidase domain containing 3 |
| chr1_+_109792641 | 0.01 |
ENST00000271332.3
|
CELSR2
|
cadherin, EGF LAG seven-pass G-type receptor 2 |
| chr1_-_67519782 | 0.01 |
ENST00000235345.5
|
SLC35D1
|
solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1 |
| chr10_+_89622870 | 0.01 |
ENST00000371953.3
|
PTEN
|
phosphatase and tensin homolog |
| chr12_+_110437328 | 0.01 |
ENST00000261739.4
|
ANKRD13A
|
ankyrin repeat domain 13A |
| chr17_+_48796905 | 0.01 |
ENST00000505658.1
ENST00000393227.2 ENST00000240304.1 ENST00000311571.3 ENST00000505619.1 ENST00000544170.1 ENST00000510984.1 |
LUC7L3
|
LUC7-like 3 (S. cerevisiae) |
| chr14_+_90863327 | 0.01 |
ENST00000356978.4
|
CALM1
|
calmodulin 1 (phosphorylase kinase, delta) |
| chr7_+_104654623 | 0.01 |
ENST00000311117.3
ENST00000334877.4 ENST00000257745.4 ENST00000334914.7 ENST00000478990.1 ENST00000495267.1 ENST00000476671.1 |
KMT2E
|
lysine (K)-specific methyltransferase 2E |
| chr22_-_32146106 | 0.01 |
ENST00000327423.6
ENST00000397493.2 ENST00000434485.1 ENST00000412743.1 |
PRR14L
|
proline rich 14-like |
| chr17_+_30677136 | 0.01 |
ENST00000394670.4
ENST00000321233.6 ENST00000394673.2 ENST00000341711.6 ENST00000579634.1 ENST00000580759.1 ENST00000342555.6 ENST00000577908.1 ENST00000394679.5 ENST00000582165.1 |
ZNF207
|
zinc finger protein 207 |
| chrX_-_40594755 | 0.01 |
ENST00000324817.1
|
MED14
|
mediator complex subunit 14 |
| chr12_-_56236711 | 0.01 |
ENST00000409200.3
|
MMP19
|
matrix metallopeptidase 19 |
| chr1_-_169863016 | 0.01 |
ENST00000367772.4
ENST00000367771.6 |
SCYL3
|
SCY1-like 3 (S. cerevisiae) |
| chr1_-_92351769 | 0.01 |
ENST00000212355.4
|
TGFBR3
|
transforming growth factor, beta receptor III |
| chr1_+_183605200 | 0.01 |
ENST00000304685.4
|
RGL1
|
ral guanine nucleotide dissociation stimulator-like 1 |
| chr6_-_29527702 | 0.01 |
ENST00000377050.4
|
UBD
|
ubiquitin D |
| chr6_+_39760783 | 0.01 |
ENST00000398904.2
ENST00000538976.1 |
DAAM2
|
dishevelled associated activator of morphogenesis 2 |
| chr8_-_57123815 | 0.00 |
ENST00000316981.3
ENST00000423799.2 ENST00000429357.2 |
PLAG1
|
pleiomorphic adenoma gene 1 |
| chr18_-_53255766 | 0.00 |
ENST00000566286.1
ENST00000564999.1 ENST00000566279.1 ENST00000354452.3 ENST00000356073.4 |
TCF4
|
transcription factor 4 |
| chr18_+_67068228 | 0.00 |
ENST00000382713.5
|
DOK6
|
docking protein 6 |
| chr10_-_62149433 | 0.00 |
ENST00000280772.2
|
ANK3
|
ankyrin 3, node of Ranvier (ankyrin G) |
| chr11_+_66188475 | 0.00 |
ENST00000311034.2
|
NPAS4
|
neuronal PAS domain protein 4 |
| chr16_+_56225248 | 0.00 |
ENST00000262493.6
|
GNAO1
|
guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O |
| chr11_-_124670550 | 0.00 |
ENST00000239614.4
|
MSANTD2
|
Myb/SANT-like DNA-binding domain containing 2 |
| chr20_+_42086525 | 0.00 |
ENST00000244020.3
|
SRSF6
|
serine/arginine-rich splicing factor 6 |
| chr4_+_126237554 | 0.00 |
ENST00000394329.3
|
FAT4
|
FAT atypical cadherin 4 |
| chr22_+_24951436 | 0.00 |
ENST00000215829.3
|
SNRPD3
|
small nuclear ribonucleoprotein D3 polypeptide 18kDa |
| chr1_+_15853308 | 0.00 |
ENST00000375838.1
ENST00000375847.3 ENST00000375849.1 |
DNAJC16
|
DnaJ (Hsp40) homolog, subfamily C, member 16 |
| chr14_-_27066636 | 0.00 |
ENST00000267422.7
ENST00000344429.5 ENST00000574031.1 ENST00000465357.2 ENST00000547619.1 |
NOVA1
|
neuro-oncological ventral antigen 1 |
| chr1_+_151584544 | 0.00 |
ENST00000458013.2
ENST00000368843.3 |
SNX27
|
sorting nexin family member 27 |
| chr9_+_115983808 | 0.00 |
ENST00000374210.6
ENST00000374212.4 |
SLC31A1
|
solute carrier family 31 (copper transporter), member 1 |
| chr22_+_40390930 | 0.00 |
ENST00000333407.6
|
FAM83F
|
family with sequence similarity 83, member F |
| chr17_+_27717415 | 0.00 |
ENST00000583121.1
ENST00000261716.3 |
TAOK1
|
TAO kinase 1 |
| chr12_+_94542459 | 0.00 |
ENST00000258526.4
|
PLXNC1
|
plexin C1 |
| chr16_-_28074822 | 0.00 |
ENST00000395724.3
ENST00000380898.2 ENST00000447459.2 |
GSG1L
|
GSG1-like |
Network of associatons between targets according to the STRING database.
First level regulatory network of ACUGGCC
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:1901143 | insulin catabolic process(GO:1901143) |
| 0.0 | 0.0 | GO:0042704 | apoptotic process involved in outflow tract morphogenesis(GO:0003275) uterine wall breakdown(GO:0042704) positive regulation of catagen(GO:0051795) regulation of apoptotic process involved in outflow tract morphogenesis(GO:1902256) |
| 0.0 | 0.1 | GO:0002071 | glandular epithelial cell maturation(GO:0002071) type B pancreatic cell maturation(GO:0072560) |
| 0.0 | 0.1 | GO:0090076 | relaxation of skeletal muscle(GO:0090076) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0031626 | beta-endorphin binding(GO:0031626) |