hg19_v2_chr13_+_73302047_73302073	0.610846	UCACAUU	ENST00000377814.2|BORA|ENSG00000136122.11|bora, aurora kinase A activator 	ENST00000377815.3|BORA|ENSG00000136122.11|bora, aurora kinase A activator 	ENST00000390667.5|BORA|ENSG00000136122.11|bora, aurora kinase A activator
hg19_v2_chr5_+_162864575_162864620	0.59858	UCACAUU	ENST00000512163.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000393929.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000340828.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511683.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510097.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511490.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510664.1|CCNG1|ENSG00000113328.14|cyclin G1
hg19_v2_chr3_-_182698381_182698431	0.566735	UCACAUU	ENST00000292782.4|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr6_+_87865262_87865339	0.550369	UCACAUU	ENST00000369577.3|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000518845.1|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000339907.4|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000496806.2|ZNF292|ENSG00000188994.8|zinc finger protein 292
hg19_v2_chr10_-_101989315_101989376	0.51949	UCACAUU	ENST00000370397.7|CHUK|ENSG00000213341.6|conserved helix-loop-helix ubiquitous kinase
hg19_v2_chr11_-_76091986_76092038	0.491688	UCACAUU	ENST00000260045.3|PRKRIR|ENSG00000137492.3|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
hg19_v2_chr1_-_68962782_68962801	0.471085	UCACAUU	ENST00000456315.2|DEPDC1|ENSG00000024526.12|DEP domain containing 1
hg19_v2_chr10_+_103986085_103986085	0.452445	UCACAUU	ENST00000370005.3|ELOVL3|ENSG00000119915.4|ELOVL fatty acid elongase 3
hg19_v2_chr3_+_187930719_187930729	0.447872	UCACAUU	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr6_+_119215308_119215391	0.436004	UCACAUU	ENST00000229595.5|ASF1A|ENSG00000111875.7|anti-silencing function 1A histone chaperone
hg19_v2_chr6_+_105404899_105404931	0.429774	UCACAUU	ENST00000345080.4|LIN28B|ENSG00000187772.6|lin-28 homolog B (C. elegans)
hg19_v2_chr4_-_78740511_78740544	0.419114	UCACAUU	ENST00000504123.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000264903.4|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000515441.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like
hg19_v2_chr3_+_88188254_88188254	0.41527	UCACAUU	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chrX_-_83757399_83757487	0.409611	UCACAUU	ENST00000373177.2|HDX|ENSG00000165259.9|highly divergent homeobox 	ENST00000297977.5|HDX|ENSG00000165259.9|highly divergent homeobox 	ENST00000506585.2|HDX|ENSG00000165259.9|highly divergent homeobox 	ENST00000449553.2|HDX|ENSG00000165259.9|highly divergent homeobox
hg19_v2_chr2_+_112812778_112812800	0.355567	UCACAUU	ENST00000283206.4|TMEM87B|ENSG00000153214.5|transmembrane protein 87B
hg19_v2_chrX_+_16804544_16804613	0.346044	UCACAUU	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr2_+_139259324_139259389	0.336042	UCACAUU	ENST00000280098.4|SPOPL|ENSG00000144228.4|speckle-type POZ protein-like
hg19_v2_chr1_+_66797687_66797884	0.333406	UCACAUU	ENST00000371045.5|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific 	ENST00000531025.1|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific 	ENST00000526197.1|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific
hg19_v2_chr3_+_31574189_31574282	0.327472	UCACAUU	ENST00000295770.2|STT3B|ENSG00000163527.5|STT3B, subunit of the oligosaccharyltransferase complex (catalytic)
hg19_v2_chr4_-_68566832_68566897	0.314688	UCACAUU	ENST00000420827.2|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6 	ENST00000322244.5|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6
hg19_v2_chr18_+_67956135_67956144	0.31455	UCACAUU	ENST00000397942.3|SOCS6|ENSG00000170677.5|suppressor of cytokine signaling 6
hg19_v2_chr5_-_41510656_41510713	0.306474	UCACAUU	ENST00000377801.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chr11_+_34073195_34073266	0.30528	UCACAUU	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr8_+_26240414_26240631	0.290695	UCACAUU	ENST00000380629.2|BNIP3L|ENSG00000104765.10|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg19_v2_chr2_+_207139367_207139452	0.287814	UCACAUU	ENST00000374423.3|ZDBF2|ENSG00000204186.3|zinc finger, DBF-type containing 2
hg19_v2_chr14_-_35182994_35183034	0.285724	UCACAUU	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chrX_+_9754461_9754496	0.279377	UCACAUU	ENST00000380913.3|SHROOM2|ENSG00000146950.8|shroom family member 2
hg19_v2_chr7_+_90032667_90032793	0.277782	UCACAUU	ENST00000496677.1|CLDN12|ENSG00000157224.11|claudin 12 	ENST00000287916.4|CLDN12|ENSG00000157224.11|claudin 12 	ENST00000535571.1|CLDN12|ENSG00000157224.11|claudin 12 	ENST00000394604.1|CLDN12|ENSG00000157224.11|claudin 12 	ENST00000394605.2|CLDN12|ENSG00000157224.11|claudin 12
hg19_v2_chr4_-_140098339_140098392	0.275927	UCACAUU	ENST00000394235.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr11_-_130184555_130184581	0.274521	UCACAUU	ENST00000525842.1|ZBTB44|ENSG00000196323.7|zinc finger and BTB domain containing 44
hg19_v2_chr3_-_88108192_88108203	0.267973	UCACAUU	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr14_-_64010046_64010107	0.266921	UCACAUU	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr8_+_76452097_76452126	0.265766	UCACAUU	ENST00000396423.2|HNF4G|ENSG00000164749.7|hepatocyte nuclear factor 4, gamma
hg19_v2_chr12_+_107349497_107349578	0.262707	UCACAUU	ENST00000548125.1|C12orf23|ENSG00000151135.5|chromosome 12 open reading frame 23 	ENST00000280756.4|C12orf23|ENSG00000151135.5|chromosome 12 open reading frame 23
hg19_v2_chr21_-_40685477_40685496	0.261043	UCACAUU	ENST00000342449.3|BRWD1|ENSG00000185658.9|bromodomain and WD repeat domain containing 1
hg19_v2_chr9_+_33817461_33817565	0.25755	UCACAUU	ENST00000263228.3|UBE2R2|ENSG00000107341.4|ubiquitin-conjugating enzyme E2R 2
hg19_v2_chr4_-_76598296_76598318	0.256272	UCACAUU	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr4_+_140222609_140222742	0.254629	UCACAUU	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr1_+_24286287_24286326	0.252748	UCACAUU	ENST00000334351.7|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2 	ENST00000374468.1|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2
hg19_v2_chr14_+_39735411_39735502	0.24517	UCACAUU	ENST00000603904.1|RP11-407N17.3|ENSG00000258941.2|cTAGE family member 5 isoform 4
hg19_v2_chr3_-_113465065_113465147	0.244689	UCACAUU	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr3_-_87040233_87040257	0.241978	UCACAUU	ENST00000398399.2|VGLL3|ENSG00000206538.3|vestigial like 3 (Drosophila)
hg19_v2_chr8_+_16884740_16884804	0.241539	UCACAUU	ENST00000318063.5|MICU3|ENSG00000155970.7|mitochondrial calcium uptake family, member 3
hg19_v2_chr1_-_240775447_240775462	0.239839	UCACAUU	ENST00000318160.4|GREM2|ENSG00000180875.4|gremlin 2, DAN family BMP antagonist
hg19_v2_chr11_+_109964087_109964123	0.237371	UCACAUU	ENST00000278590.3|ZC3H12C|ENSG00000149289.6|zinc finger CCCH-type containing 12C
hg19_v2_chr2_-_183903133_183903210	0.236739	UCACAUU	ENST00000361354.4|NCKAP1|ENSG00000061676.10|NCK-associated protein 1
hg19_v2_chr8_-_122653630_122653661	0.235577	UCACAUU	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr5_+_118407053_118407239	0.23343	UCACAUU	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr2_+_28974668_28974729	0.233147	UCACAUU	ENST00000296122.6|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme 	ENST00000395366.2|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr3_+_134204881_134204913	0.23063	UCACAUU	ENST00000511574.1|CEP63|ENSG00000182923.12|centrosomal protein 63kDa 	ENST00000337090.3|CEP63|ENSG00000182923.12|centrosomal protein 63kDa 	ENST00000383229.3|CEP63|ENSG00000182923.12|centrosomal protein 63kDa
hg19_v2_chr12_-_10766184_10766222	0.230304	UCACAUU	ENST00000539554.1|MAGOHB|ENSG00000111196.5|mago-nashi homolog B (Drosophila) 	ENST00000381881.2|MAGOHB|ENSG00000111196.5|mago-nashi homolog B (Drosophila) 	ENST00000320756.2|MAGOHB|ENSG00000111196.5|mago-nashi homolog B (Drosophila)
hg19_v2_chr10_+_126490354_126490395	0.227478	UCACAUU	ENST00000298492.5|FAM175B|ENSG00000165660.7|family with sequence similarity 175, member B
hg19_v2_chr12_-_100536608_100536667	0.225986	UCACAUU	ENST00000356828.3|UHRF1BP1L|ENSG00000111647.8|UHRF1 binding protein 1-like 	ENST00000279907.7|UHRF1BP1L|ENSG00000111647.8|UHRF1 binding protein 1-like
hg19_v2_chrX_-_135056216_135056227	0.22501	UCACAUU	ENST00000305963.2|MMGT1|ENSG00000169446.4|membrane magnesium transporter 1
hg19_v2_chr7_+_27779714_27779819	0.220972	UCACAUU	ENST00000265393.6|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1 	ENST00000409980.1|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1 	ENST00000433216.2|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1 	ENST00000396319.2|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v2_chr2_-_172017343_172017391	0.220774	UCACAUU	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr12_-_76953284_76953341	0.216768	UCACAUU	ENST00000547544.1|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8 	ENST00000393249.2|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8
hg19_v2_chr12_+_20522179_20522203	0.216742	UCACAUU	ENST00000359062.3|PDE3A|ENSG00000172572.6|phosphodiesterase 3A, cGMP-inhibited
hg19_v2_chr16_-_56485257_56485287	0.213797	UCACAUU	ENST00000300291.5|NUDT21|ENSG00000167005.9|nudix (nucleoside diphosphate linked moiety X)-type motif 21
hg19_v2_chr14_-_53162361_53162513	0.213054	UCACAUU	ENST00000395686.3|ERO1L|ENSG00000197930.8|ERO1-like (S. cerevisiae)
hg19_v2_chr4_-_129208940_129208976	0.211094	UCACAUU	ENST00000296425.5|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chr4_+_41937131_41937211	0.21105	UCACAUU	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr1_-_205719295_205719404	0.210056	UCACAUU	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr7_-_95225768_95225967	0.206156	UCACAUU	ENST00000005178.5|PDK4|ENSG00000004799.7|pyruvate dehydrogenase kinase, isozyme 4
hg19_v2_chr7_+_116312411_116312502	0.206049	UCACAUU	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr15_+_52043758_52043809	0.205601	UCACAUU	ENST00000249700.4|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal) 	ENST00000539962.2|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal)
hg19_v2_chr1_+_78470530_78470551	0.205127	UCACAUU	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr7_+_94139105_94139197	0.203075	UCACAUU	ENST00000297273.4|CASD1|ENSG00000127995.12|CAS1 domain containing 1
hg19_v2_chr12_+_72233487_72233563	0.19855	UCACAUU	ENST00000482439.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000550746.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000491063.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000319106.8|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000485960.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000393309.3|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15
hg19_v2_chr12_-_93323013_93323112	0.190396	UCACAUU	ENST00000322349.8|EEA1|ENSG00000102189.12|early endosome antigen 1
hg19_v2_chr2_-_175113301_175113426	0.189725	UCACAUU	ENST00000344357.5|OLA1|ENSG00000138430.11|Obg-like ATPase 1 	ENST00000284719.3|OLA1|ENSG00000138430.11|Obg-like ATPase 1
hg19_v2_chr6_-_166755995_166756091	0.189071	UCACAUU	ENST00000361731.3|SFT2D1|ENSG00000198818.5|SFT2 domain containing 1
hg19_v2_chr11_+_32914579_32914724	0.188379	UCACAUU	ENST00000399302.2|QSER1|ENSG00000060749.10|glutamine and serine rich 1
hg19_v2_chr9_+_91003271_91003386	0.188344	UCACAUU	ENST00000375859.3|SPIN1|ENSG00000106723.12|spindlin 1 	ENST00000541629.1|SPIN1|ENSG00000106723.12|spindlin 1
hg19_v2_chr1_+_198126093_198126207	0.187919	UCACAUU	ENST00000367385.4|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000442588.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000538004.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7
hg19_v2_chr14_-_57735528_57735726	0.187406	UCACAUU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr12_+_104324112_104324196	0.186543	UCACAUU	ENST00000299767.5|HSP90B1|ENSG00000166598.8|heat shock protein 90kDa beta (Grp94), member 1
hg19_v2_chr13_+_20532807_20532841	0.185875	UCACAUU	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr1_-_9970227_9970356	0.18471	UCACAUU	ENST00000377263.1|CTNNBIP1|ENSG00000178585.10|catenin, beta interacting protein 1
hg19_v2_chr7_+_38217818_38217882	0.18069	UCACAUU	ENST00000009041.7|STARD3NL|ENSG00000010270.9|STARD3 N-terminal like 	ENST00000544203.1|STARD3NL|ENSG00000010270.9|STARD3 N-terminal like 	ENST00000434197.1|STARD3NL|ENSG00000010270.9|STARD3 N-terminal like
hg19_v2_chr1_+_93913713_93913839	0.180598	UCACAUU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chrX_+_115567767_115567790	0.179238	UCACAUU	ENST00000371900.4|SLC6A14|ENSG00000087916.7|solute carrier family 6 (amino acid transporter), member 14
hg19_v2_chr2_+_200775971_200775988	0.17873	UCACAUU	ENST00000319974.5|C2orf69|ENSG00000178074.5|chromosome 2 open reading frame 69
hg19_v2_chr5_-_40755987_40756077	0.178491	UCACAUU	ENST00000337702.4|TTC33|ENSG00000113638.8|tetratricopeptide repeat domain 33
hg19_v2_chr17_-_62658186_62658231	0.178025	UCACAUU	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr11_+_86748863_86748948	0.174678	UCACAUU	ENST00000340353.7|TMEM135|ENSG00000166575.12|transmembrane protein 135
hg19_v2_chr1_-_229478236_229478308	0.174501	UCACAUU	ENST00000366687.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein 	ENST00000452552.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein
hg19_v2_chr4_-_74864386_74864496	0.17321	UCACAUU	ENST00000296027.4|CXCL5|ENSG00000163735.6|chemokine (C-X-C motif) ligand 5
hg19_v2_chr7_-_87505658_87505717	0.172327	UCACAUU	ENST00000341119.5|SLC25A40|ENSG00000075303.8|solute carrier family 25, member 40
hg19_v2_chr3_+_62304712_62304732	0.17154	UCACAUU	ENST00000494481.1|C3orf14|ENSG00000114405.6|chromosome 3 open reading frame 14
hg19_v2_chr2_-_190649082_190649102	0.170452	UCACAUU	ENST00000392350.3|ORMDL1|ENSG00000128699.9|ORM1-like 1 (S. cerevisiae) 	ENST00000392349.4|ORMDL1|ENSG00000128699.9|ORM1-like 1 (S. cerevisiae)
hg19_v2_chr5_+_82767284_82767310	0.165817	UCACAUU	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr6_+_117002339_117002400	0.165628	UCACAUU	ENST00000413340.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000368564.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000356348.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6)
hg19_v2_chr17_-_49337392_49337465	0.163562	UCACAUU	ENST00000376381.2|MBTD1|ENSG00000011258.11|mbt domain containing 1 	ENST00000586178.1|MBTD1|ENSG00000011258.11|mbt domain containing 1
hg19_v2_chr9_-_74383799_74383818	0.163272	UCACAUU	ENST00000377044.4|TMEM2|ENSG00000135048.9|transmembrane protein 2
hg19_v2_chr9_+_102668915_102669024	0.163084	UCACAUU	ENST00000259400.6|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000531035.1|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000525640.1|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000534052.1|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000526607.1|STX17|ENSG00000136874.6|syntaxin 17
hg19_v2_chr10_+_60094735_60094749	0.160994	UCACAUU	ENST00000373910.4|UBE2D1|ENSG00000072401.10|ubiquitin-conjugating enzyme E2D 1
hg19_v2_chr5_+_56469775_56469837	0.158595	UCACAUU	ENST00000424459.3|GPBP1|ENSG00000062194.11|GC-rich promoter binding protein 1
hg19_v2_chr12_+_31812602_31812645	0.158399	UCACAUU	ENST00000538463.1|METTL20|ENSG00000139160.9|methyltransferase like 20 	ENST00000357721.3|METTL20|ENSG00000139160.9|methyltransferase like 20 	ENST00000539633.1|METTL20|ENSG00000139160.9|methyltransferase like 20
hg19_v2_chr1_+_185126291_185126307	0.158256	UCACAUU	ENST00000367500.4|SWT1|ENSG00000116668.8|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg19_v2_chr2_-_201936302_201936416	0.157055	UCACAUU	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr12_-_46662772_46662835	0.15651	UCACAUU	ENST00000549049.1|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1 	ENST00000439706.1|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1 	ENST00000398637.5|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1
hg19_v2_chr5_+_65222299_65222361	0.155461	UCACAUU	ENST00000284037.5|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein
hg19_v2_chr13_-_79233314_79233331	0.15489	UCACAUU	ENST00000282003.6|RNF219|ENSG00000152193.7|ring finger protein 219
hg19_v2_chr4_+_39699664_39699772	0.151358	UCACAUU	ENST00000261427.5|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000510934.1|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000295963.6|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K
hg19_v2_chr5_+_127419449_127419540	0.150725	UCACAUU	ENST00000262461.2|SLC12A2|ENSG00000064651.9|solute carrier family 12 (sodium/potassium/chloride transporter), member 2 	ENST00000343225.4|SLC12A2|ENSG00000064651.9|solute carrier family 12 (sodium/potassium/chloride transporter), member 2
hg19_v2_chr12_+_66217911_66218018	0.149706	UCACAUU	ENST00000403681.2|HMGA2|ENSG00000149948.9|high mobility group AT-hook 2
hg19_v2_chr10_+_89622870_89622870	0.147954	UCACAUU	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr9_-_113800317_113800328	0.146687	UCACAUU	ENST00000374431.3|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr17_-_66287257_66287276	0.146186	UCACAUU	ENST00000327268.4|SLC16A6|ENSG00000108932.7|solute carrier family 16, member 6
hg19_v2_chr10_-_60027642_60027705	0.1455	UCACAUU	ENST00000373935.3|IPMK|ENSG00000151151.5|inositol polyphosphate multikinase
hg19_v2_chr4_-_125633876_125633897	0.14414	UCACAUU	ENST00000504087.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50 	ENST00000515641.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50
hg19_v2_chr6_-_8064567_8064652	0.141785	UCACAUU	ENST00000543936.1|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted 	ENST00000397457.2|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted
hg19_v2_chr18_+_9913977_9914088	0.140973	UCACAUU	ENST00000400000.2|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 	ENST00000340541.4|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
hg19_v2_chr5_+_32788945_32788945	0.140608	UCACAUU	ENST00000326958.1|AC026703.1|ENSG00000181495.1|AC026703.1
hg19_v2_chr14_+_73525144_73525224	0.140171	UCACAUU	ENST00000261973.7|RBM25|ENSG00000119707.9|RNA binding motif protein 25 	ENST00000540173.1|RBM25|ENSG00000119707.9|RNA binding motif protein 25
hg19_v2_chr4_+_166248775_166248901	0.139349	UCACAUU	ENST00000261507.6|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000507013.1|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000393766.2|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000504317.1|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1
hg19_v2_chr4_-_174256276_174256303	0.13834	UCACAUU	ENST00000296503.5|HMGB2|ENSG00000164104.7|high mobility group box 2
hg19_v2_chr10_-_119806085_119806114	0.136889	UCACAUU	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr4_-_53525406_53525502	0.135152	UCACAUU	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr2_-_153574480_153574552	0.133387	UCACAUU	ENST00000410080.1|PRPF40A|ENSG00000196504.11|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg19_v2_chr10_+_88516396_88516426	0.132917	UCACAUU	ENST00000372037.3|BMPR1A|ENSG00000107779.7|bone morphogenetic protein receptor, type IA
hg19_v2_chr5_+_145583156_145583180	0.132692	UCACAUU	ENST00000265271.5|RBM27|ENSG00000091009.6|RNA binding motif protein 27
hg19_v2_chr4_+_144257915_144258009	0.132369	UCACAUU	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr9_+_100263912_100263988	0.131441	UCACAUU	ENST00000259365.4|TMOD1|ENSG00000136842.9|tropomodulin 1
hg19_v2_chr1_-_212004090_212004168	0.131259	UCACAUU	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chr5_-_178054105_178054119	0.130809	UCACAUU	ENST00000316308.4|CLK4|ENSG00000113240.8|CDC-like kinase 4
hg19_v2_chr13_+_80055284_80055295	0.130744	UCACAUU	ENST00000218652.7|NDFIP2|ENSG00000102471.9|Nedd4 family interacting protein 2
hg19_v2_chr1_-_86174065_86174134	0.13031	UCACAUU	ENST00000370574.3|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6 	ENST00000431532.2|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6
hg19_v2_chr1_-_150669500_150669602	0.129151	UCACAUU	ENST00000271732.3|GOLPH3L|ENSG00000143457.6|golgi phosphoprotein 3-like
hg19_v2_chr2_-_225450013_225450068	0.128637	UCACAUU	ENST00000264414.4|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr20_+_31407692_31407709	0.126355	UCACAUU	ENST00000375571.5|MAPRE1|ENSG00000101367.8|microtubule-associated protein, RP/EB family, member 1
hg19_v2_chr3_-_71774516_71774587	0.125877	UCACAUU	ENST00000425534.3|EIF4E3|ENSG00000163412.8|eukaryotic translation initiation factor 4E family member 3
hg19_v2_chr7_+_65338230_65338293	0.125399	UCACAUU	ENST00000360768.3|VKORC1L1|ENSG00000196715.5|vitamin K epoxide reductase complex, subunit 1-like 1
hg19_v2_chr2_+_60983361_60983418	0.125284	UCACAUU	ENST00000238714.3|PAPOLG|ENSG00000115421.8|poly(A) polymerase gamma
hg19_v2_chr1_-_51984908_51984952	0.124292	UCACAUU	ENST00000371730.2|EPS15|ENSG00000085832.12|epidermal growth factor receptor pathway substrate 15
hg19_v2_chr11_-_85780086_85780161	0.124226	UCACAUU	ENST00000532317.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000528256.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000526033.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein
hg19_v2_chr15_-_52861394_52861436	0.123821	UCACAUU	ENST00000563277.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa 	ENST00000566423.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa
hg19_v2_chr7_-_112430647_112430776	0.123296	UCACAUU	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr4_+_39046615_39046680	0.122513	UCACAUU	ENST00000261425.3|KLHL5|ENSG00000109790.12|kelch-like family member 5 	ENST00000508137.2|KLHL5|ENSG00000109790.12|kelch-like family member 5
hg19_v2_chr3_-_113233992_113234044	0.122078	UCACAUU	ENST00000295872.4|SPICE1|ENSG00000163611.7|spindle and centriole associated protein 1 	ENST00000480527.1|SPICE1|ENSG00000163611.7|spindle and centriole associated protein 1
hg19_v2_chr5_+_32711419_32711540	0.121812	UCACAUU	ENST00000265074.8|NPR3|ENSG00000113389.11|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)
hg19_v2_chr9_+_100395891_100395922	0.119304	UCACAUU	ENST00000375147.3|NCBP1|ENSG00000136937.8|nuclear cap binding protein subunit 1, 80kDa
hg19_v2_chr4_+_154387480_154387536	0.119302	UCACAUU	ENST00000409663.3|KIAA0922|ENSG00000121210.11|KIAA0922 	ENST00000440693.1|KIAA0922|ENSG00000121210.11|KIAA0922 	ENST00000409959.3|KIAA0922|ENSG00000121210.11|KIAA0922
hg19_v2_chr4_+_41992489_41992561	0.115441	UCACAUU	ENST00000264451.7|SLC30A9|ENSG00000014824.9|solute carrier family 30 (zinc transporter), member 9
hg19_v2_chr12_+_69004619_69004699	0.114519	UCACAUU	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chr9_-_127952032_127952098	0.113481	UCACAUU	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr15_+_40532058_40532072	0.111706	UCACAUU	ENST00000260404.4|PAK6|ENSG00000137843.7|p21 protein (Cdc42/Rac)-activated kinase 6
hg19_v2_chr21_+_35445827_35445886	0.111291	UCACAUU	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chr7_+_89975979_89976052	0.110629	UCACAUU	ENST00000257659.8|GTPBP10|ENSG00000105793.11|GTP-binding protein 10 (putative) 	ENST00000222511.6|GTPBP10|ENSG00000105793.11|GTP-binding protein 10 (putative) 	ENST00000417207.1|GTPBP10|ENSG00000105793.11|GTP-binding protein 10 (putative)
hg19_v2_chr2_+_196521458_196521491	0.110492	UCACAUU	ENST00000409086.3|SLC39A10|ENSG00000196950.9|solute carrier family 39 (zinc transporter), member 10
hg19_v2_chr15_-_71055878_71055932	0.110321	UCACAUU	ENST00000322954.6|UACA|ENSG00000137831.10|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg19_v2_chr6_+_76458909_76458934	0.109965	UCACAUU	ENST00000369981.3|MYO6|ENSG00000196586.9|myosin VI 	ENST00000369985.4|MYO6|ENSG00000196586.9|myosin VI
hg19_v2_chr3_+_155588300_155588369	0.109829	UCACAUU	ENST00000496455.2|GMPS|ENSG00000163655.11|guanine monphosphate synthase
hg19_v2_chr2_-_47168906_47168994	0.109787	UCACAUU	ENST00000444761.2|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409147.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr20_+_47662805_47662907	0.108873	UCACAUU	ENST00000262982.2|CSE1L|ENSG00000124207.12|CSE1 chromosome segregation 1-like (yeast) 	ENST00000542325.1|CSE1L|ENSG00000124207.12|CSE1 chromosome segregation 1-like (yeast)
hg19_v2_chr10_-_70166946_70166950	0.108646	UCACAUU	ENST00000388768.2|RUFY2|ENSG00000204130.8|RUN and FYVE domain containing 2
hg19_v2_chr4_+_123747834_123747863	0.107976	UCACAUU	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr17_+_45608430_45608490	0.107615	UCACAUU	ENST00000322157.4|NPEPPS|ENSG00000141279.11|aminopeptidase puromycin sensitive
hg19_v2_chr14_+_103058948_103059005	0.107136	UCACAUU	ENST00000262241.6|RCOR1|ENSG00000089902.8|REST corepressor 1
hg19_v2_chr14_+_39736299_39736412	0.106492	UCACAUU	ENST00000341502.5|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000396158.2|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000280083.3|CTAGE5|ENSG00000150527.12|CTAGE family, member 5
hg19_v2_chr9_+_101569944_101569981	0.106491	UCACAUU	ENST00000375011.3|GALNT12|ENSG00000119514.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)
hg19_v2_chr2_+_26568965_26569025	0.105794	UCACAUU	ENST00000260585.7|EPT1|ENSG00000138018.13|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific) 	ENST00000447170.1|EPT1|ENSG00000138018.13|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
hg19_v2_chr10_+_72164135_72164135	0.105087	UCACAUU	ENST00000373218.4|EIF4EBP2|ENSG00000148730.6|eukaryotic translation initiation factor 4E binding protein 2
hg19_v2_chrX_-_138914394_138914447	0.104819	UCACAUU	ENST00000327569.3|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000361648.2|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000370543.1|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000359686.2|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C
hg19_v2_chr8_+_126442563_126442624	0.104361	UCACAUU	ENST00000311922.3|TRIB1|ENSG00000173334.3|tribbles pseudokinase 1
hg19_v2_chr6_+_4021554_4021656	0.103565	UCACAUU	ENST00000337659.6|PRPF4B|ENSG00000112739.12|pre-mRNA processing factor 4B
hg19_v2_chr7_-_105029329_105029376	0.103321	UCACAUU	ENST00000393651.3|SRPK2|ENSG00000135250.12|SRSF protein kinase 2 	ENST00000460391.1|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr9_-_135230336_135230398	0.102129	UCACAUU	ENST00000224140.5|SETX|ENSG00000107290.9|senataxin 	ENST00000372169.2|SETX|ENSG00000107290.9|senataxin 	ENST00000393220.1|SETX|ENSG00000107290.9|senataxin
hg19_v2_chr10_-_95462265_95462378	0.102057	UCACAUU	ENST00000536233.1|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 	ENST00000359204.4|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 	ENST00000371430.2|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 	ENST00000394100.2|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
hg19_v2_chr9_-_127905736_127905815	0.101891	UCACAUU	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr1_-_89531041_89531050	0.101806	UCACAUU	ENST00000370473.4|GBP1|ENSG00000117228.9|guanylate binding protein 1, interferon-inducible
hg19_v2_chr3_+_107241783_107241850	0.101654	UCACAUU	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr1_+_218458625_218458660	0.101629	UCACAUU	ENST00000366932.3|RRP15|ENSG00000067533.5|ribosomal RNA processing 15 homolog (S. cerevisiae)
hg19_v2_chr10_+_70480963_70481010	0.101198	UCACAUU	ENST00000265872.6|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000535016.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000538031.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543719.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000539539.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543225.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000536012.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000494903.2|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1
hg19_v2_chr16_-_46723066_46723121	0.101072	UCACAUU	ENST00000299138.7|VPS35|ENSG00000069329.11|vacuolar protein sorting 35 homolog (S. cerevisiae)
hg19_v2_chr4_-_23891693_23891706	0.100412	UCACAUU	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr13_-_52027134_52027343	0.100409	UCACAUU	ENST00000311234.4|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000425000.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000463928.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000442263.3|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000398119.2|INTS6|ENSG00000102786.10|integrator complex subunit 6
hg19_v2_chr1_-_225615599_225615802	0.0991149	UCACAUU	ENST00000421383.1|LBR|ENSG00000143815.10|lamin B receptor 	ENST00000272163.4|LBR|ENSG00000143815.10|lamin B receptor
hg19_v2_chr10_+_115438920_115438963	0.098914	UCACAUU	ENST00000429617.1|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase 	ENST00000369331.4|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase
hg19_v2_chr7_-_139876812_139876860	0.0980718	UCACAUU	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr13_-_50367057_50367142	0.0980629	UCACAUU	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr1_-_93645818_93645918	0.0980586	UCACAUU	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr3_-_24536253_24536328	0.0974363	UCACAUU	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr2_-_55844720_55844772	0.0971841	UCACAUU	ENST00000345102.5|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium) 	ENST00000272313.5|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium) 	ENST00000407823.3|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium)
hg19_v2_chr4_+_155665123_155665158	0.0969479	UCACAUU	ENST00000336356.3|LRAT|ENSG00000121207.7|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)
hg19_v2_chr5_+_34656331_34656351	0.0964257	UCACAUU	ENST00000265109.3|RAI14|ENSG00000039560.9|retinoic acid induced 14
hg19_v2_chr6_+_71998506_71998522	0.0955832	UCACAUU	ENST00000370435.4|OGFRL1|ENSG00000119900.7|opioid growth factor receptor-like 1
hg19_v2_chr7_-_93633684_93633695	0.095141	UCACAUU	ENST00000222547.3|BET1|ENSG00000105829.7|Bet1 golgi vesicular membrane trafficking protein 	ENST00000425626.1|BET1|ENSG00000105829.7|Bet1 golgi vesicular membrane trafficking protein
hg19_v2_chr14_-_39639523_39639617	0.095057	UCACAUU	ENST00000330149.5|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B 	ENST00000554018.1|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B 	ENST00000347691.5|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B
hg19_v2_chr10_+_90750378_90750444	0.0947459	UCACAUU	ENST00000355740.2|FAS|ENSG00000026103.15|Fas cell surface death receptor 	ENST00000352159.4|FAS|ENSG00000026103.15|Fas cell surface death receptor
hg19_v2_chr10_-_65225722_65225755	0.0945082	UCACAUU	ENST00000399251.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr4_-_103748880_103749047	0.0927441	UCACAUU	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr5_-_133747589_133747603	0.092653	UCACAUU	ENST00000458198.2|CDKN2AIPNL|ENSG00000237190.3|CDKN2A interacting protein N-terminal like
hg19_v2_chrX_-_24045303_24045303	0.0915942	UCACAUU	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr4_-_21699380_21699397	0.0909525	UCACAUU	ENST00000382148.3|KCNIP4|ENSG00000185774.10|Kv channel interacting protein 4
hg19_v2_chr1_+_218519577_218519594	0.0896538	UCACAUU	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr9_+_15553055_15553101	0.0884758	UCACAUU	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr1_-_150849208_150849244	0.0875172	UCACAUU	ENST00000358595.5|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr10_-_102046098_102046122	0.0873905	UCACAUU	ENST00000441611.1|BLOC1S2|ENSG00000196072.7|biogenesis of lysosomal organelles complex-1, subunit 2
hg19_v2_chr15_+_63481668_63481812	0.0870839	UCACAUU	ENST00000321437.4|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family 	ENST00000559006.1|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family 	ENST00000448330.2|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family
hg19_v2_chr22_+_39853258_39853349	0.0863155	UCACAUU	ENST00000341184.6|MGAT3|ENSG00000128268.11|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
hg19_v2_chr14_-_91282726_91282804	0.0862645	UCACAUU	ENST00000328459.6|TTC7B|ENSG00000165914.10|tetratricopeptide repeat domain 7B 	ENST00000357056.2|TTC7B|ENSG00000165914.10|tetratricopeptide repeat domain 7B
hg19_v2_chr1_+_82266053_82266082	0.08614	UCACAUU	ENST00000370715.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370713.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000319517.6|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370717.2|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000394879.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000271029.4|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000335786.5|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr8_+_125985531_125985571	0.0855285	UCACAUU	ENST00000319286.5|ZNF572|ENSG00000180938.5|zinc finger protein 572
hg19_v2_chr4_-_89619386_89619386	0.085272	UCACAUU	ENST00000323061.5|NAP1L5|ENSG00000177432.6|nucleosome assembly protein 1-like 5
hg19_v2_chr15_-_56209306_56209344	0.0849117	UCACAUU	ENST00000506154.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000338963.2|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000508342.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
hg19_v2_chr19_+_45973120_45973171	0.0848209	UCACAUU	ENST00000592811.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000586615.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v2_chr14_-_89259080_89259096	0.0847607	UCACAUU	ENST00000554922.1|EML5|ENSG00000165521.11|echinoderm microtubule associated protein like 5 	ENST00000352093.5|EML5|ENSG00000165521.11|echinoderm microtubule associated protein like 5
hg19_v2_chr10_+_43633914_43633935	0.0846952	UCACAUU	ENST00000374466.3|CSGALNACT2|ENSG00000169826.6|chondroitin sulfate N-acetylgalactosaminyltransferase 2 	ENST00000374464.1|CSGALNACT2|ENSG00000169826.6|chondroitin sulfate N-acetylgalactosaminyltransferase 2
hg19_v2_chr3_-_98620500_98620547	0.0840687	UCACAUU	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr15_-_80695917_80695917	0.0839978	UCACAUU	ENST00000559008.1|RP11-210M15.2|ENSG00000259495.1|Uncharacterized protein
hg19_v2_chr17_+_54911444_54911564	0.0838692	UCACAUU	ENST00000284061.3|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa 	ENST00000572810.1|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa
hg19_v2_chr13_-_100624012_100624163	0.08384	UCACAUU	ENST00000267294.4|ZIC5|ENSG00000139800.8|Zic family member 5
hg19_v2_chr12_+_22778009_22778112	0.0837324	UCACAUU	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr8_-_103876965_103877012	0.0835798	UCACAUU	ENST00000337198.5|AZIN1|ENSG00000155096.9|antizyme inhibitor 1
hg19_v2_chr2_-_164592497_164592573	0.0834978	UCACAUU	ENST00000333129.3|FIGN|ENSG00000182263.9|fidgetin 	ENST00000409634.1|FIGN|ENSG00000182263.9|fidgetin
hg19_v2_chr7_-_14029515_14029642	0.0833603	UCACAUU	ENST00000430479.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000405218.2|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000343495.5|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr6_-_64029879_64029891	0.0833465	UCACAUU	ENST00000370658.5|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain 	ENST00000485906.2|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain 	ENST00000370657.4|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain
hg19_v2_chr8_+_86376081_86376142	0.0827683	UCACAUU	ENST00000285379.5|CA2|ENSG00000104267.5|carbonic anhydrase II
hg19_v2_chr17_-_29151794_29151803	0.0825795	UCACAUU	ENST00000324238.6|CRLF3|ENSG00000176390.10|cytokine receptor-like factor 3
hg19_v2_chr8_-_67579418_67579498	0.0824411	UCACAUU	ENST00000310421.4|VCPIP1|ENSG00000175073.7|valosin containing protein (p97)/p47 complex interacting protein 1
hg19_v2_chr4_-_76439596_76439643	0.0812575	UCACAUU	ENST00000451788.1|RCHY1|ENSG00000163743.9|ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase 	ENST00000512706.1|RCHY1|ENSG00000163743.9|ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
hg19_v2_chr6_+_138188551_138188719	0.0812142	UCACAUU	ENST00000237289.4|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3 	ENST00000433680.1|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3
hg19_v2_chr17_-_58603568_58603610	0.0808844	UCACAUU	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr17_-_18585541_18585572	0.0805455	UCACAUU	ENST00000285274.5|ZNF286B|ENSG00000249459.4|zinc finger protein 286B 	ENST00000545289.1|ZNF286B|ENSG00000249459.4|zinc finger protein 286B 	ENST00000580145.1|ZNF286B|ENSG00000249459.4|zinc finger protein 286B
hg19_v2_chr2_-_179343268_179343338	0.0803258	UCACAUU	ENST00000424785.2|FKBP7|ENSG00000079150.13|FK506 binding protein 7
hg19_v2_chr2_-_37193606_37193633	0.0798604	UCACAUU	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr5_+_112312416_112312440	0.079706	UCACAUU	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr1_+_112162381_112162431	0.0794184	UCACAUU	ENST00000433097.1|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000369709.3|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000436150.2|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family
hg19_v2_chr2_-_96781984_96781984	0.0792334	UCACAUU	ENST00000409345.3|ADRA2B|ENSG00000222040.3|adrenoceptor alpha 2B
hg19_v2_chr1_+_159141397_159141549	0.0790519	UCACAUU	ENST00000368124.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000368125.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000416746.1|CADM3|ENSG00000162706.8|cell adhesion molecule 3
hg19_v2_chr1_+_28099683_28099694	0.0790275	UCACAUU	ENST00000373943.4|STX12|ENSG00000117758.9|syntaxin 12
hg19_v2_chr1_+_162467595_162467655	0.0788156	UCACAUU	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr2_+_179345173_179345221	0.0787696	UCACAUU	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr2_+_42396472_42396563	0.0776184	UCACAUU	ENST00000318522.5|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4 	ENST00000402711.2|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4
hg19_v2_chr3_+_140660634_140660729	0.0774853	UCACAUU	ENST00000446041.2|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000507429.1|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000324194.6|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36
hg19_v2_chr4_+_159131346_159131401	0.0774055	UCACAUU	ENST00000508243.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000296529.6|TMEM144|ENSG00000164124.6|transmembrane protein 144
hg19_v2_chr3_+_196466710_196466824	0.0771209	UCACAUU	ENST00000327134.3|PAK2|ENSG00000180370.6|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v2_chr2_-_54087066_54087297	0.0766416	UCACAUU	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr8_+_59465728_59465826	0.0764402	UCACAUU	ENST00000260130.4|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000422546.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000447182.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000413219.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000424270.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000523483.1|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000520168.1|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin)
hg19_v2_chr11_+_74660278_74660334	0.0760421	UCACAUU	ENST00000263672.6|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000530257.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000526361.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000532972.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae)
hg19_v2_chr20_+_37434329_37434371	0.0757158	UCACAUU	ENST00000299824.1|PPP1R16B|ENSG00000101445.5|protein phosphatase 1, regulatory subunit 16B 	ENST00000373331.2|PPP1R16B|ENSG00000101445.5|protein phosphatase 1, regulatory subunit 16B
hg19_v2_chr17_+_28705921_28706000	0.0756795	UCACAUU	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr6_+_19837592_19837621	0.075268	UCACAUU	ENST00000378700.3|ID4|ENSG00000172201.6|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
hg19_v2_chr8_-_26371608_26371608	0.0750597	UCACAUU	ENST00000522362.2|PNMA2|ENSG00000240694.4|paraneoplastic Ma antigen 2
hg19_v2_chr2_+_120517174_120517207	0.0747138	UCACAUU	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr11_+_32112431_32112454	0.0736874	UCACAUU	ENST00000054950.3|RCN1|ENSG00000049449.4|reticulocalbin 1, EF-hand calcium binding domain
hg19_v2_chr6_+_3982909_3982909	0.0726861	UCACAUU	ENST00000356722.3|C6ORF50|ENSG00000145965.5|C6ORF50
hg19_v2_chr9_-_125027079_125027130	0.072478	UCACAUU	ENST00000417201.3|RBM18|ENSG00000119446.9|RNA binding motif protein 18
hg19_v2_chr8_+_22457127_22457185	0.0719893	UCACAUU	ENST00000289989.5|C8orf58|ENSG00000241852.5|chromosome 8 open reading frame 58
hg19_v2_chr4_+_38665810_38665827	0.0716869	UCACAUU	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr22_+_29279552_29279586	0.0711596	UCACAUU	ENST00000544604.2|ZNRF3|ENSG00000183579.11|zinc and ring finger 3
hg19_v2_chr15_-_55881135_55881192	0.0709666	UCACAUU	ENST00000302000.6|PYGO1|ENSG00000171016.7|pygopus family PHD finger 1
hg19_v2_chr1_+_164528866_164528877	0.070606	UCACAUU	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr14_+_74318513_74318562	0.0701298	UCACAUU	ENST00000555228.1|PTGR2|ENSG00000140043.7|prostaglandin reductase 2 	ENST00000555661.1|PTGR2|ENSG00000140043.7|prostaglandin reductase 2
hg19_v2_chr2_+_43864387_43864472	0.0697536	UCACAUU	ENST00000282406.4|PLEKHH2|ENSG00000152527.9|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
hg19_v2_chr14_+_60715928_60716007	0.0697214	UCACAUU	ENST00000395076.4|PPM1A|ENSG00000100614.13|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v2_chr9_+_108456800_108456849	0.0696532	UCACAUU	ENST00000434214.1|TMEM38B|ENSG00000095209.7|transmembrane protein 38B 	ENST00000374692.3|TMEM38B|ENSG00000095209.7|transmembrane protein 38B
hg19_v2_chr15_+_33010175_33010211	0.0696469	UCACAUU	ENST00000300177.4|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist 	ENST00000560677.1|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist 	ENST00000560830.1|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist
hg19_v2_chr4_+_84457250_84457268	0.0695788	UCACAUU	ENST00000395226.2|AGPAT9|ENSG00000138678.6|1-acylglycerol-3-phosphate O-acyltransferase 9
hg19_v2_chr3_+_67048721_67048760	0.0695698	UCACAUU	ENST00000295568.4|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000484414.1|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000460576.1|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000417314.2|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8
hg19_v2_chr2_+_163200598_163200667	0.0695554	UCACAUU	ENST00000437150.2|GCA|ENSG00000115271.6|grancalcin, EF-hand calcium binding protein 	ENST00000453113.2|GCA|ENSG00000115271.6|grancalcin, EF-hand calcium binding protein
hg19_v2_chr14_-_92572894_92572965	0.0694459	UCACAUU	ENST00000532032.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000506466.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000555381.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000557311.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554592.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554672.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000553491.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000556220.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000502250.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000503767.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000393287.5|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000340660.6|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000545170.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000429774.2|ATXN3|ENSG00000066427.17|ataxin 3
hg19_v2_chr10_+_112836779_112836797	0.0689879	UCACAUU	ENST00000280155.2|ADRA2A|ENSG00000150594.5|adrenoceptor alpha 2A
hg19_v2_chr1_-_84464780_84464862	0.06837	UCACAUU	ENST00000260505.8|TTLL7|ENSG00000137941.12|tubulin tyrosine ligase-like family, member 7
hg19_v2_chr20_-_524455_524466	0.0676554	UCACAUU	ENST00000349736.5|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide 	ENST00000217244.3|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide
hg19_v2_chr21_-_15755446_15755508	0.0673061	UCACAUU	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr7_+_77325738_77325789	0.0669035	UCACAUU	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chr9_+_36572851_36572932	0.066648	UCACAUU	ENST00000298048.2|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000538311.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536987.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000545008.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536860.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536329.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000541717.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000543751.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase
hg19_v2_chr15_-_31283798_31283851	0.0665679	UCACAUU	ENST00000435680.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10 	ENST00000425768.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10
hg19_v2_chr2_-_160472952_160473080	0.0664533	UCACAUU	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr1_-_92351769_92351787	0.0662857	UCACAUU	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr7_-_120498357_120498456	0.0660563	UCACAUU	ENST00000415871.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000222747.3|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000430985.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chr10_+_85899196_85899273	0.0659504	UCACAUU	ENST00000372134.3|GHITM|ENSG00000165678.15|growth hormone inducible transmembrane protein
hg19_v2_chr8_-_103668114_103668134	0.0659036	UCACAUU	ENST00000285407.6|KLF10|ENSG00000155090.10|Kruppel-like factor 10
hg19_v2_chr1_-_63153944_63154110	0.0657324	UCACAUU	ENST00000340370.5|DOCK7|ENSG00000116641.11|dedicator of cytokinesis 7 	ENST00000404627.2|DOCK7|ENSG00000116641.11|dedicator of cytokinesis 7 	ENST00000251157.5|DOCK7|ENSG00000116641.11|dedicator of cytokinesis 7
hg19_v2_chr8_-_66754172_66754201	0.0656905	UCACAUU	ENST00000401827.3|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr3_-_161090660_161090673	0.0647509	UCACAUU	ENST00000359175.4|SPTSSB|ENSG00000196542.4|serine palmitoyltransferase, small subunit B
hg19_v2_chr13_-_31736027_31736064	0.0642339	UCACAUU	ENST00000380406.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000320027.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000380405.4|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1
hg19_v2_chr1_+_33283043_33283198	0.0642065	UCACAUU	ENST00000373476.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000373475.5|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000529027.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000398243.3|S100PBP|ENSG00000116497.13|S100P binding protein
hg19_v2_chr10_-_14590644_14590669	0.0640318	UCACAUU	ENST00000378470.1|FAM107B|ENSG00000065809.9|family with sequence similarity 107, member B
hg19_v2_chr16_-_23160591_23160787	0.063532	UCACAUU	ENST00000219689.7|USP31|ENSG00000103404.10|ubiquitin specific peptidase 31
hg19_v2_chr3_+_5163905_5164039	0.063227	UCACAUU	ENST00000256496.3|ARL8B|ENSG00000134108.8|ADP-ribosylation factor-like 8B 	ENST00000419534.2|ARL8B|ENSG00000134108.8|ADP-ribosylation factor-like 8B
hg19_v2_chr5_-_114961858_114961876	0.0630604	UCACAUU	ENST00000282382.4|TMED7-TICAM2|ENSG00000251201.4|TMED7-TICAM2 readthrough 	ENST00000456936.3|TMED7|ENSG00000134970.13|transmembrane emp24 protein transport domain containing 7 	ENST00000408996.4|TICAM2|ENSG00000243414.4|toll-like receptor adaptor molecule 2
hg19_v2_chr18_+_67068228_67068291	0.0623087	UCACAUU	ENST00000382713.5|DOK6|ENSG00000206052.6|docking protein 6
hg19_v2_chr4_-_111119804_111119832	0.0614803	UCACAUU	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr15_-_72410109_72410161	0.0612408	UCACAUU	ENST00000564571.1|MYO9A|ENSG00000066933.11|myosin IXA
hg19_v2_chr4_+_128554081_128554121	0.0611337	UCACAUU	ENST00000335251.6|INTU|ENSG00000164066.8|inturned planar cell polarity protein 	ENST00000296461.5|INTU|ENSG00000164066.8|inturned planar cell polarity protein
hg19_v2_chr5_-_132948216_132948255	0.0610708	UCACAUU	ENST00000265342.7|FSTL4|ENSG00000053108.12|follistatin-like 4
hg19_v2_chr3_+_9404526_9404782	0.0608946	UCACAUU	ENST00000452837.2|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000417036.1|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000419437.1|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000345094.3|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000515662.2|THUMPD3|ENSG00000134077.11|THUMP domain containing 3
hg19_v2_chr1_+_200708671_200708744	0.0601699	UCACAUU	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr5_-_79551858_79551907	0.0597648	UCACAUU	ENST00000507668.2|SERINC5|ENSG00000164300.11|serine incorporator 5 	ENST00000512721.1|SERINC5|ENSG00000164300.11|serine incorporator 5
hg19_v2_chr3_-_28390581_28390618	0.0596335	UCACAUU	ENST00000479665.1|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr14_-_74485960_74486035	0.0595376	UCACAUU	ENST00000556242.1|ENTPD5|ENSG00000187097.8|ectonucleoside triphosphate diphosphohydrolase 5 	ENST00000334696.6|ENTPD5|ENSG00000187097.8|ectonucleoside triphosphate diphosphohydrolase 5
hg19_v2_chr3_-_138553594_138553684	0.0590579	UCACAUU	ENST00000477593.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta 	ENST00000483968.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
hg19_v2_chr10_+_121652204_121652286	0.0589717	UCACAUU	ENST00000369075.3|SEC23IP|ENSG00000107651.8|SEC23 interacting protein 	ENST00000543134.1|SEC23IP|ENSG00000107651.8|SEC23 interacting protein
hg19_v2_chr3_+_150804676_150804697	0.0589049	UCACAUU	ENST00000474524.1|MED12L|ENSG00000144893.8|mediator complex subunit 12-like 	ENST00000273432.4|MED12L|ENSG00000144893.8|mediator complex subunit 12-like
hg19_v2_chr2_+_135676381_135676435	0.0586473	UCACAUU	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr12_+_96588143_96588185	0.0584496	UCACAUU	ENST00000228741.3|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2) 	ENST00000547249.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr13_+_47127293_47127321	0.0583981	UCACAUU	ENST00000311191.6|LRCH1|ENSG00000136141.10|leucine-rich repeats and calponin homology (CH) domain containing 1
hg19_v2_chr3_-_18466787_18466861	0.0582451	UCACAUU	ENST00000338745.6|SATB1|ENSG00000182568.12|SATB homeobox 1 	ENST00000450898.1|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr16_-_49315731_49315754	0.0581703	UCACAUU	ENST00000219197.6|CBLN1|ENSG00000102924.7|cerebellin 1 precursor
hg19_v2_chr6_+_121756809_121756838	0.0580322	UCACAUU	ENST00000282561.3|GJA1|ENSG00000152661.7|gap junction protein, alpha 1, 43kDa
hg19_v2_chr1_-_38325256_38325292	0.0579399	UCACAUU	ENST00000373036.4|MTF1|ENSG00000188786.9|metal-regulatory transcription factor 1
hg19_v2_chr17_+_57784826_57784883	0.0576756	UCACAUU	ENST00000262291.4|VMP1|ENSG00000062716.6|vacuole membrane protein 1
hg19_v2_chrX_-_132549506_132549526	0.057523	UCACAUU	ENST00000370828.3|GPC4|ENSG00000076716.7|glypican 4
hg19_v2_chr2_-_86564776_86564813	0.0571784	UCACAUU	ENST00000165698.5|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000541910.1|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000535845.1|REEP1|ENSG00000068615.12|receptor accessory protein 1
hg19_v2_chr3_-_133380731_133380834	0.0571457	UCACAUU	ENST00000260810.5|TOPBP1|ENSG00000163781.8|topoisomerase (DNA) II binding protein 1
hg19_v2_chr2_+_48541776_48541874	0.0570519	UCACAUU	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr1_+_118148556_118148681	0.0567632	UCACAUU	ENST00000369448.3|FAM46C|ENSG00000183508.4|family with sequence similarity 46, member C
hg19_v2_chr15_-_58358607_58358621	0.0565738	UCACAUU	ENST00000249750.4|ALDH1A2|ENSG00000128918.10|aldehyde dehydrogenase 1 family, member A2
hg19_v2_chrX_-_109561294_109561467	0.0563706	UCACAUU	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr16_-_18812746_18813000	0.0561747	UCACAUU	ENST00000546206.2|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1 	ENST00000567078.2|RP11-1035H13.3|ENSG00000260342.2|Uncharacterized protein  	ENST00000562819.1|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1 	ENST00000562234.2|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1 	ENST00000304414.7|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1
hg19_v2_chr5_+_133984462_133984514	0.0561167	UCACAUU	ENST00000398844.2|SEC24A|ENSG00000113615.8|SEC24 family member A 	ENST00000322887.4|SEC24A|ENSG00000113615.8|SEC24 family member A
hg19_v2_chr3_-_52713729_52713784	0.0551537	UCACAUU	ENST00000296302.7|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000356770.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000337303.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409057.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000410007.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409114.3|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409767.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000423351.1|PBRM1|ENSG00000163939.14|polybromo 1
hg19_v2_chr2_+_173940442_173940625	0.0546333	UCACAUU	ENST00000409176.2|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT  	ENST00000338983.3|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT  	ENST00000431503.2|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT
hg19_v2_chr1_-_114355083_114355123	0.0545252	UCACAUU	ENST00000261441.5|RSBN1|ENSG00000081019.9|round spermatid basic protein 1
hg19_v2_chrX_-_20284958_20285039	0.0543428	UCACAUU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr13_+_98605902_98605968	0.0541486	UCACAUU	ENST00000460070.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481455.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000261574.5|IPO5|ENSG00000065150.14|importin 5 	ENST00000493281.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000463157.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000471898.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000489058.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481689.1|IPO5|ENSG00000065150.14|importin 5
hg19_v2_chr3_+_69812877_69812962	0.0541478	UCACAUU	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr10_+_31608054_31608156	0.054127	UCACAUU	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr4_+_15004165_15004298	0.0538037	UCACAUU	ENST00000538197.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000541112.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000442003.2|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2
hg19_v2_chr14_-_68141535_68141574	0.0537134	UCACAUU	ENST00000554659.1|VTI1B|ENSG00000100568.6|vesicle transport through interaction with t-SNAREs 1B
hg19_v2_chr7_-_123197733_123197890	0.0537056	UCACAUU	ENST00000470123.1|NDUFA5|ENSG00000128609.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 	ENST00000471770.1|NDUFA5|ENSG00000128609.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
hg19_v2_chr3_+_188889737_188889767	0.0537003	UCACAUU	ENST00000345063.3|TPRG1|ENSG00000188001.5|tumor protein p63 regulated 1
hg19_v2_chr9_+_4490394_4490446	0.0535175	UCACAUU	ENST00000262352.3|SLC1A1|ENSG00000106688.7|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v2_chr15_-_27018175_27018241	0.0534757	UCACAUU	ENST00000311550.5|GABRB3|ENSG00000166206.9|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg19_v2_chr12_-_42538657_42538720	0.0522418	UCACAUU	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chrX_-_19140677_19140760	0.0514302	UCACAUU	ENST00000357544.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379869.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000360279.4|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379873.2|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379878.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000354791.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379876.1|GPR64|ENSG00000173698.13|G protein-coupled receptor 64
hg19_v2_chr3_+_101292939_101293063	0.0513744	UCACAUU	ENST00000265260.3|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000469941.1|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000296024.5|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein
hg19_v2_chr1_-_39339777_39339777	0.0508153	UCACAUU	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr11_+_134146635_134146635	0.050376	UCACAUU	ENST00000431683.2|GLB1L3|ENSG00000166105.11|galactosidase, beta 1-like 3
hg19_v2_chr3_-_72496035_72496069	0.0496697	UCACAUU	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr20_-_17949363_17949454	0.0496672	UCACAUU	ENST00000377759.4|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000606557.1|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000606602.1|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000486039.1|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000481323.1|SNX5|ENSG00000089006.12|sorting nexin 5
hg19_v2_chr10_-_101491828_101491900	0.0495159	UCACAUU	ENST00000370483.5|COX15|ENSG00000014919.8|cytochrome c oxidase assembly homolog 15 (yeast) 	ENST00000016171.5|COX15|ENSG00000014919.8|cytochrome c oxidase assembly homolog 15 (yeast)
hg19_v2_chr6_-_151712673_151712709	0.0494495	UCACAUU	ENST00000325144.4|ZBTB2|ENSG00000181472.4|zinc finger and BTB domain containing 2
hg19_v2_chr18_+_60190226_60190314	0.0494397	UCACAUU	ENST00000269499.5|ZCCHC2|ENSG00000141664.5|zinc finger, CCHC domain containing 2
hg19_v2_chr4_+_129730779_129730826	0.0493795	UCACAUU	ENST00000226319.6|PHF17|ENSG00000077684.11|jade family PHD finger 1
hg19_v2_chr5_-_76935513_76935513	0.0480765	UCACAUU	ENST00000306422.3|OTP|ENSG00000171540.6|orthopedia homeobox
hg19_v2_chr11_-_102962929_102962944	0.0477353	UCACAUU	ENST00000260247.5|DCUN1D5|ENSG00000137692.7|DCN1, defective in cullin neddylation 1, domain containing 5
hg19_v2_chr12_+_68042495_68042508	0.0473861	UCACAUU	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr1_-_108742957_108743003	0.0473063	UCACAUU	ENST00000565488.1|SLC25A24|ENSG00000085491.11|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
hg19_v2_chr6_+_110501344_110501412	0.0470207	UCACAUU	ENST00000368932.1|CDC40|ENSG00000168438.10|cell division cycle 40
hg19_v2_chr2_+_152214098_152214115	0.0469094	UCACAUU	ENST00000243347.3|TNFAIP6|ENSG00000123610.3|tumor necrosis factor, alpha-induced protein 6
hg19_v2_chr11_+_82868030_82868179	0.0467839	UCACAUU	ENST00000298281.4|PCF11|ENSG00000165494.6|PCF11 cleavage and polyadenylation factor subunit 	ENST00000530660.1|PCF11|ENSG00000165494.6|PCF11 cleavage and polyadenylation factor subunit
hg19_v2_chr12_+_27396901_27397108	0.0467637	UCACAUU	ENST00000541191.1|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like 	ENST00000389032.3|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like
hg19_v2_chr8_-_57123815_57123867	0.046132	UCACAUU	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr12_+_101188547_101188585	0.0456819	UCACAUU	ENST00000546991.1|ANO4|ENSG00000151572.12|anoctamin 4 	ENST00000392979.3|ANO4|ENSG00000151572.12|anoctamin 4
hg19_v2_chr6_-_134639180_134639220	0.0450924	UCACAUU	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chr3_-_135914615_135914701	0.0445858	UCACAUU	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr1_+_100503643_100503677	0.0445759	UCACAUU	ENST00000370152.3|HIAT1|ENSG00000156875.9|hippocampus abundant transcript 1
hg19_v2_chr10_+_112631547_112631596	0.0443176	UCACAUU	ENST00000280154.7|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor) 	ENST00000393104.2|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor)
hg19_v2_chr14_-_80677970_80678051	0.0442877	UCACAUU	ENST00000438257.4|DIO2|ENSG00000211448.7|deiodinase, iodothyronine, type II
hg19_v2_chr17_-_33814851_33814890	0.0438835	UCACAUU	ENST00000449046.1|SLFN12L|ENSG00000205045.4|schlafen family member 12-like 	ENST00000260908.7|SLFN12L|ENSG00000205045.4|schlafen family member 12-like
hg19_v2_chr7_-_93204033_93204043	0.0437434	UCACAUU	ENST00000359558.2|CALCR|ENSG00000004948.9|calcitonin receptor 	ENST00000360249.4|CALCR|ENSG00000004948.9|calcitonin receptor 	ENST00000426151.1|CALCR|ENSG00000004948.9|calcitonin receptor
hg19_v2_chr15_-_67546963_67547074	0.0431195	UCACAUU	ENST00000561452.1|AAGAB|ENSG00000103591.8|alpha- and gamma-adaptin binding protein 	ENST00000261880.5|AAGAB|ENSG00000103591.8|alpha- and gamma-adaptin binding protein
hg19_v2_chr2_+_170683942_170683972	0.0428212	UCACAUU	ENST00000272793.5|UBR3|ENSG00000144357.12|ubiquitin protein ligase E3 component n-recognin 3 (putative)
hg19_v2_chr2_-_206950781_206950947	0.042774	UCACAUU	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr5_+_137801160_137801179	0.0427631	UCACAUU	ENST00000239938.4|EGR1|ENSG00000120738.7|early growth response 1
hg19_v2_chr12_+_100967420_100967502	0.0425428	UCACAUU	ENST00000266754.5|GAS2L3|ENSG00000139354.6|growth arrest-specific 2 like 3 	ENST00000547754.1|GAS2L3|ENSG00000139354.6|growth arrest-specific 2 like 3
hg19_v2_chr2_-_208634287_208634439	0.0424363	UCACAUU	ENST00000295417.3|FZD5|ENSG00000163251.3|frizzled family receptor 5
hg19_v2_chr12_+_32655048_32655108	0.0423993	UCACAUU	ENST00000427716.2|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4 	ENST00000266482.3|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4
hg19_v2_chr8_-_117886955_117887105	0.0420841	UCACAUU	ENST00000297338.2|RAD21|ENSG00000164754.8|RAD21 homolog (S. pombe)
hg19_v2_chr2_-_209119831_209119857	0.0420258	UCACAUU	ENST00000345146.2|IDH1|ENSG00000138413.9|isocitrate dehydrogenase 1 (NADP+), soluble
hg19_v2_chr19_-_46476791_46476819	0.0418015	UCACAUU	ENST00000263257.5|NOVA2|ENSG00000104967.6|neuro-oncological ventral antigen 2
hg19_v2_chr8_+_11141925_11141937	0.0414463	UCACAUU	ENST00000221086.3|MTMR9|ENSG00000104643.5|myotubularin related protein 9
hg19_v2_chr11_-_94964354_94964374	0.0413727	UCACAUU	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr4_+_124320665_124320702	0.0411635	UCACAUU	ENST00000394339.2|SPRY1|ENSG00000164056.6|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg19_v2_chr3_-_160283348_160283376	0.0409104	UCACAUU	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr17_+_35766965_35767030	0.039955	UCACAUU	ENST00000394395.2|TADA2A|ENSG00000108264.12|transcriptional adaptor 2A 	ENST00000589153.1|TADA2A|ENSG00000108264.12|transcriptional adaptor 2A 	ENST00000586023.1|TADA2A|ENSG00000108264.12|transcriptional adaptor 2A
hg19_v2_chr4_+_79697495_79697538	0.0398461	UCACAUU	ENST00000502871.1|BMP2K|ENSG00000138756.13|BMP2 inducible kinase 	ENST00000335016.5|BMP2K|ENSG00000138756.13|BMP2 inducible kinase
hg19_v2_chr4_+_113152881_113152912	0.0394906	UCACAUU	ENST00000274000.5|AP1AR|ENSG00000138660.7|adaptor-related protein complex 1 associated regulatory protein
hg19_v2_chr3_-_122233723_122233797	0.0392036	UCACAUU	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr17_-_33760164_33760218	0.0387202	UCACAUU	ENST00000445092.1|SLFN12|ENSG00000172123.8|schlafen family member 12 	ENST00000394562.1|SLFN12|ENSG00000172123.8|schlafen family member 12 	ENST00000447040.2|SLFN12|ENSG00000172123.8|schlafen family member 12
hg19_v2_chr6_+_89790490_89790506	0.0380128	UCACAUU	ENST00000336032.3|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr12_-_105478339_105478361	0.037507	UCACAUU	ENST00000424857.2|ALDH1L2|ENSG00000136010.9|aldehyde dehydrogenase 1 family, member L2 	ENST00000258494.9|ALDH1L2|ENSG00000136010.9|aldehyde dehydrogenase 1 family, member L2
hg19_v2_chr12_+_62860581_62860629	0.037461	UCACAUU	ENST00000393632.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393630.3|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000280379.6|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000546600.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552738.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393629.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552115.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae)
hg19_v2_chr4_-_24586140_24586188	0.0368125	UCACAUU	ENST00000336812.4|DHX15|ENSG00000109606.8|DEAH (Asp-Glu-Ala-His) box helicase 15
hg19_v2_chr6_+_117996621_117996665	0.0363101	UCACAUU	ENST00000368494.3|NUS1|ENSG00000153989.7|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
hg19_v2_chr12_-_104234966_104234984	0.0354784	UCACAUU	ENST00000392876.3|NT5DC3|ENSG00000111696.7|5'-nucleotidase domain containing 3
hg19_v2_chr1_-_39347255_39347303	0.0354531	UCACAUU	ENST00000454994.2|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa 	ENST00000357771.3|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa
hg19_v2_chr14_+_67707826_67707994	0.0351029	UCACAUU	ENST00000261681.4|MPP5|ENSG00000072415.4|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
hg19_v2_chr3_+_147127142_147127171	0.0347571	UCACAUU	ENST00000282928.4|ZIC1|ENSG00000152977.5|Zic family member 1
hg19_v2_chr7_-_44924939_44924993	0.0347562	UCACAUU	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr3_+_111805182_111805210	0.0336869	UCACAUU	ENST00000430855.1|C3orf52|ENSG00000114529.8|chromosome 3 open reading frame 52 	ENST00000431717.2|C3orf52|ENSG00000114529.8|chromosome 3 open reading frame 52 	ENST00000264848.5|C3orf52|ENSG00000114529.8|chromosome 3 open reading frame 52
hg19_v2_chr9_+_129567282_129567353	0.0335452	UCACAUU	ENST00000449886.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000373464.4|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000450858.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43
hg19_v2_chr17_-_62502639_62502849	0.0335018	UCACAUU	ENST00000225792.5|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000581697.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000584279.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000577922.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr12_+_112856690_112856731	0.0332856	UCACAUU	ENST00000392597.1|PTPN11|ENSG00000179295.11|protein tyrosine phosphatase, non-receptor type 11 	ENST00000351677.2|PTPN11|ENSG00000179295.11|protein tyrosine phosphatase, non-receptor type 11
hg19_v2_chr6_-_24721054_24721074	0.0332471	UCACAUU	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr4_-_80994210_80994284	0.0332047	UCACAUU	ENST00000403729.2|ANTXR2|ENSG00000163297.12|anthrax toxin receptor 2
hg19_v2_chr14_+_79745746_79745762	0.0324268	UCACAUU	ENST00000281127.7|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr14_-_31495569_31495636	0.0315	UCACAUU	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chrX_+_146993449_146993498	0.0307031	UCACAUU	ENST00000218200.8|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370471.3|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370477.1|FMR1|ENSG00000102081.9|fragile X mental retardation 1
hg19_v2_chr7_-_28220354_28220441	0.0305563	UCACAUU	ENST00000283928.5|JAZF1|ENSG00000153814.7|JAZF zinc finger 1
hg19_v2_chr11_-_86666427_86666450	0.0302619	UCACAUU	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr6_-_116381918_116381977	0.0295345	UCACAUU	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr14_-_45431091_45431175	0.0291023	UCACAUU	ENST00000579157.1|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000396128.4|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000556500.1|KLHL28|ENSG00000179454.9|kelch-like family member 28
hg19_v2_chr2_-_1748214_1748295	0.0289714	UCACAUU	ENST00000433670.1|PXDN|ENSG00000130508.6|peroxidasin homolog (Drosophila) 	ENST00000425171.1|PXDN|ENSG00000130508.6|peroxidasin homolog (Drosophila) 	ENST00000252804.4|PXDN|ENSG00000130508.6|peroxidasin homolog (Drosophila)
hg19_v2_chr4_+_145567173_145567296	0.0289176	UCACAUU	ENST00000296575.3|HHIP|ENSG00000164161.5|hedgehog interacting protein
hg19_v2_chr14_-_38064198_38064239	0.0288377	UCACAUU	ENST00000250448.2|FOXA1|ENSG00000129514.4|forkhead box A1
hg19_v2_chr12_+_104682496_104682651	0.0288176	UCACAUU	ENST00000378070.4|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1
hg19_v2_chrX_+_122993827_122993910	0.0282712	UCACAUU	ENST00000371199.3|XIAP|ENSG00000101966.8|X-linked inhibitor of apoptosis
hg19_v2_chr17_+_34900737_34900821	0.027336	UCACAUU	ENST00000304718.4|GGNBP2|ENSG00000005955.8|gametogenetin binding protein 2 	ENST00000485685.2|GGNBP2|ENSG00000005955.8|gametogenetin binding protein 2
hg19_v2_chr10_+_93683519_93683594	0.0270932	UCACAUU	ENST00000265990.6|BTAF1|ENSG00000095564.9|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
hg19_v2_chr10_-_125851961_125851970	0.0270561	UCACAUU	ENST00000346248.5|CHST15|ENSG00000182022.13|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
hg19_v2_chr7_-_93520259_93520316	0.026753	UCACAUU	ENST00000222543.5|TFPI2|ENSG00000105825.7|tissue factor pathway inhibitor 2
hg19_v2_chr2_+_178977143_178977211	0.0261027	UCACAUU	ENST00000286070.5|RBM45|ENSG00000155636.10|RNA binding motif protein 45
hg19_v2_chr5_+_135468516_135468621	0.0260616	UCACAUU	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr22_+_45559722_45559881	0.0258185	UCACAUU	ENST00000347635.4|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000407019.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000424634.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000417702.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000425733.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000430547.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa
hg19_v2_chr12_+_70636765_70636817	0.0256215	UCACAUU	ENST00000552231.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000229195.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000547780.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000418359.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2
hg19_v2_chr12_-_54673871_54673925	0.025128	UCACAUU	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chrX_+_70316005_70316047	0.0250473	UCACAUU	ENST00000374259.3|FOXO4|ENSG00000184481.12|forkhead box O4
hg19_v2_chrX_+_21958674_21958721	0.0250375	UCACAUU	ENST00000404933.2|SMS|ENSG00000102172.11|spermine synthase
hg19_v2_chr2_+_45878790_45878913	0.0250232	UCACAUU	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr11_+_75526212_75526301	0.0244005	UCACAUU	ENST00000356136.3|UVRAG|ENSG00000198382.4|UV radiation resistance associated
hg19_v2_chr8_-_81083731_81083813	0.0242208	UCACAUU	ENST00000379096.5|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr2_+_26915584_26915634	0.0241597	UCACAUU	ENST00000302909.3|KCNK3|ENSG00000171303.5|potassium channel, subfamily K, member 3
hg19_v2_chr11_-_79151695_79151710	0.0237924	UCACAUU	ENST00000278550.7|TENM4|ENSG00000149256.10|teneurin transmembrane protein 4
hg19_v2_chr7_+_5938351_5938379	0.0235909	UCACAUU	ENST00000325974.6|CCZ1|ENSG00000122674.8|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
hg19_v2_chr12_-_88974236_88974256	0.0234923	UCACAUU	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chr20_+_49348081_49348096	0.0230701	UCACAUU	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr2_-_102003987_102004057	0.0227543	UCACAUU	ENST00000324768.5|CREG2|ENSG00000175874.5|cellular repressor of E1A-stimulated genes 2
hg19_v2_chr4_-_140223670_140223705	0.0223078	UCACAUU	ENST00000394228.1|NDUFC1|ENSG00000109390.7|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa 	ENST00000539387.1|NDUFC1|ENSG00000109390.7|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa
hg19_v2_chr3_+_38206975_38207101	0.0220268	UCACAUU	ENST00000446845.1|OXSR1|ENSG00000172939.4|oxidative stress responsive 1 	ENST00000311806.3|OXSR1|ENSG00000172939.4|oxidative stress responsive 1
hg19_v2_chr6_-_82462425_82462491	0.0218832	UCACAUU	ENST00000369754.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000320172.6|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000369756.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A
hg19_v2_chr1_-_65432171_65432252	0.021841	UCACAUU	ENST00000342505.4|JAK1|ENSG00000162434.7|Janus kinase 1
hg19_v2_chr1_-_20812690_20812763	0.021508	UCACAUU	ENST00000375078.3|CAMK2N1|ENSG00000162545.5|calcium/calmodulin-dependent protein kinase II inhibitor 1
hg19_v2_chr4_-_25162188_25162208	0.0214489	UCACAUU	ENST00000302922.3|SEPSECS|ENSG00000109618.7|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
hg19_v2_chr13_+_27131887_27131899	0.0211849	UCACAUU	ENST00000335327.5|WASF3|ENSG00000132970.8|WAS protein family, member 3
hg19_v2_chr5_-_162887071_162887166	0.0209368	UCACAUU	ENST00000302764.4|NUDCD2|ENSG00000170584.6|NudC domain containing 2
hg19_v2_chr5_+_56111361_56111403	0.0207964	UCACAUU	ENST00000399503.3|MAP3K1|ENSG00000095015.5|mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
hg19_v2_chr5_+_76506706_76506787	0.020583	UCACAUU	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chr18_-_70535177_70535254	0.0203805	UCACAUU	ENST00000327305.6|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v2_chr1_-_55680762_55680786	0.0201564	UCACAUU	ENST00000407756.1|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24 	ENST00000294383.6|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24
hg19_v2_chr2_+_176981307_176981307	0.0199845	UCACAUU	ENST00000249501.4|HOXD10|ENSG00000128710.5|homeobox D10
hg19_v2_chr1_+_42846443_42846502	0.0197618	UCACAUU	ENST00000410070.2|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A 	ENST00000431473.3|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A
hg19_v2_chr10_-_120840309_120840338	0.0196812	UCACAUU	ENST00000369144.3|EIF3A|ENSG00000107581.8|eukaryotic translation initiation factor 3, subunit A
hg19_v2_chr9_+_114423615_114423661	0.0194977	UCACAUU	ENST00000374293.4|GNG10|ENSG00000242616.3|guanine nucleotide binding protein (G protein), gamma 10
hg19_v2_chr11_-_110583451_110583451	0.019016	UCACAUU	ENST00000260283.4|ARHGAP20|ENSG00000137727.8|Rho GTPase activating protein 20 	ENST00000528829.1|ARHGAP20|ENSG00000137727.8|Rho GTPase activating protein 20
hg19_v2_chr22_-_46659219_46659244	0.018807	UCACAUU	ENST00000253255.5|PKDREJ|ENSG00000130943.5|polycystin (PKD) family receptor for egg jelly
hg19_v2_chr12_+_119419294_119419308	0.0185313	UCACAUU	ENST00000267260.4|SRRM4|ENSG00000139767.4|serine/arginine repetitive matrix 4
hg19_v2_chr14_+_55518349_55518423	0.0183136	UCACAUU	ENST00000395468.4|MAPK1IP1L|ENSG00000168175.10|mitogen-activated protein kinase 1 interacting protein 1-like
hg19_v2_chr8_-_91658303_91658327	0.0179482	UCACAUU	ENST00000458549.2|TMEM64|ENSG00000180694.9|transmembrane protein 64
hg19_v2_chr2_-_158485387_158485517	0.0173413	UCACAUU	ENST00000243349.8|ACVR1C|ENSG00000123612.11|activin A receptor, type IC
hg19_v2_chr1_+_236849754_236849808	0.0172236	UCACAUU	ENST00000542672.1|ACTN2|ENSG00000077522.8|actinin, alpha 2 	ENST00000366578.4|ACTN2|ENSG00000077522.8|actinin, alpha 2
hg19_v2_chr6_-_137113604_137113666	0.0169938	UCACAUU	ENST00000359015.4|MAP3K5|ENSG00000197442.8|mitogen-activated protein kinase kinase kinase 5
hg19_v2_chr16_-_17564738_17564834	0.0169234	UCACAUU	ENST00000261381.6|XYLT1|ENSG00000103489.7|xylosyltransferase I
hg19_v2_chr5_-_107717058_107717155	0.0163722	UCACAUU	ENST00000359660.5|FBXL17|ENSG00000145743.11|F-box and leucine-rich repeat protein 17
hg19_v2_chr2_+_148778570_148778589	0.0158673	UCACAUU	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr2_-_10952922_10952970	0.0158244	UCACAUU	ENST00000272227.3|PDIA6|ENSG00000143870.8|protein disulfide isomerase family A, member 6
hg19_v2_chr2_-_100721178_100721307	0.015609	UCACAUU	ENST00000409236.2|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3
hg19_v2_chr1_-_48462566_48462595	0.0156049	UCACAUU	ENST00000606738.2|TRABD2B|ENSG00000269113.3|TraB domain containing 2B
hg19_v2_chr14_+_50234309_50234330	0.0152397	UCACAUU	ENST00000298307.5|KLHDC2|ENSG00000165516.6|kelch domain containing 2
hg19_v2_chr14_+_74960423_74960479	0.01487	UCACAUU	ENST00000556816.1|ISCA2|ENSG00000165898.9|iron-sulfur cluster assembly 2 	ENST00000298818.8|ISCA2|ENSG00000165898.9|iron-sulfur cluster assembly 2 	ENST00000554924.1|ISCA2|ENSG00000165898.9|iron-sulfur cluster assembly 2
hg19_v2_chr7_+_144052381_144052509	0.0148369	UCACAUU	ENST00000498580.1|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5 	ENST00000056217.5|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr15_-_60690163_60690242	0.0147439	UCACAUU	ENST00000558998.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560165.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000557986.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559780.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559467.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559956.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000332680.4|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000396024.3|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000421017.2|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560466.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558132.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559113.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000557906.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558558.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560468.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559370.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558169.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559725.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558985.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000451270.2|ANXA2|ENSG00000182718.12|annexin A2
hg19_v2_chr5_+_50678921_50678921	0.0142244	UCACAUU	ENST00000230658.7|ISL1|ENSG00000016082.10|ISL LIM homeobox 1
hg19_v2_chr10_-_70287231_70287290	0.0137413	UCACAUU	ENST00000609923.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr5_+_140165876_140165876	0.0128262	UCACAUU	ENST00000504120.2|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000394633.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000378133.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1
hg19_v2_chr18_+_3261883_3261907	0.0124535	UCACAUU	ENST00000237500.5|MYL12B|ENSG00000118680.8|myosin, light chain 12B, regulatory
hg19_v2_chr18_+_59854480_59854551	0.0118364	UCACAUU	ENST00000256858.6|KIAA1468|ENSG00000134444.9|KIAA1468 	ENST00000398130.2|KIAA1468|ENSG00000134444.9|KIAA1468
hg19_v2_chr1_-_160068465_160068479	0.011501	UCACAUU	ENST00000314485.7|IGSF8|ENSG00000162729.9|immunoglobulin superfamily, member 8 	ENST00000368086.1|IGSF8|ENSG00000162729.9|immunoglobulin superfamily, member 8
hg19_v2_chr10_+_96162242_96162283	0.0113592	UCACAUU	ENST00000225235.4|TBC1D12|ENSG00000108239.8|TBC1 domain family, member 12
hg19_v2_chr15_+_74833518_74833567	0.0113416	UCACAUU	ENST00000346246.5|ARID3B|ENSG00000179361.13|AT rich interactive domain 3B (BRIGHT-like)
hg19_v2_chr9_-_16870704_16870841	0.0112035	UCACAUU	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr15_-_65670360_65670378	0.0109989	UCACAUU	ENST00000327987.4|IGDCC3|ENSG00000174498.9|immunoglobulin superfamily, DCC subclass, member 3
hg19_v2_chr2_-_160919112_160919162	0.0102127	UCACAUU	ENST00000283243.7|PLA2R1|ENSG00000153246.7|phospholipase A2 receptor 1, 180kDa 	ENST00000392771.1|PLA2R1|ENSG00000153246.7|phospholipase A2 receptor 1, 180kDa
hg19_v2_chr1_-_166845515_166845564	0.0101847	UCACAUU	ENST00000367874.4|TADA1|ENSG00000152382.5|transcriptional adaptor 1
hg19_v2_chr18_-_78005231_78005435	0.0101006	UCACAUU	ENST00000470488.2|PARD6G|ENSG00000178184.11|par-6 family cell polarity regulator gamma 	ENST00000353265.3|PARD6G|ENSG00000178184.11|par-6 family cell polarity regulator gamma
hg19_v2_chr8_+_134203273_134203289	0.00993618	UCACAUU	ENST00000250160.6|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1
hg19_v2_chr3_-_47205457_47205492	0.00986103	UCACAUU	ENST00000409792.3|SETD2|ENSG00000181555.15|SET domain containing 2
hg19_v2_chr4_+_170541660_170541677	0.00983236	UCACAUU	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr10_-_98945677_98945729	0.00933427	UCACAUU	ENST00000266058.4|SLIT1|ENSG00000187122.12|slit homolog 1 (Drosophila) 	ENST00000371041.3|SLIT1|ENSG00000187122.12|slit homolog 1 (Drosophila)
hg19_v2_chrX_+_73641286_73641400	0.00911012	UCACAUU	ENST00000587091.1|SLC16A2|ENSG00000147100.5|solute carrier family 16, member 2 (thyroid hormone transporter)
hg19_v2_chr12_-_117175819_117175887	0.00886689	UCACAUU	ENST00000261318.3|C12orf49|ENSG00000111412.4|chromosome 12 open reading frame 49 	ENST00000536380.1|C12orf49|ENSG00000111412.4|chromosome 12 open reading frame 49
hg19_v2_chr13_-_103053946_103054124	0.00879727	UCACAUU	ENST00000376131.4|FGF14|ENSG00000102466.11|fibroblast growth factor 14
hg19_v2_chr13_+_43597269_43597339	0.00855195	UCACAUU	ENST00000379221.2|DNAJC15|ENSG00000120675.4|DnaJ (Hsp40) homolog, subfamily C, member 15
hg19_v2_chrX_-_63425561_63425624	0.00788361	UCACAUU	ENST00000374869.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1 	ENST00000330258.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1
hg19_v2_chrX_-_64196307_64196338	0.00771991	UCACAUU	ENST00000545618.1|ZC4H2|ENSG00000126970.11|zinc finger, C4H2 domain containing
hg19_v2_chr7_-_106301405_106301484	0.00761688	UCACAUU	ENST00000523505.1|CCDC71L|ENSG00000253276.1|coiled-coil domain containing 71-like
hg19_v2_chr5_+_55033845_55033870	0.00732462	UCACAUU	ENST00000353507.5|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 	ENST00000514278.2|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 	ENST00000505374.1|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 	ENST00000506511.1|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg19_v2_chr12_-_51477333_51477426	0.00718223	UCACAUU	ENST00000228515.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000548206.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000546935.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000548981.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2
hg19_v2_chr1_+_179923873_179923954	0.00697571	UCACAUU	ENST00000367607.3|CEP350|ENSG00000135837.11|centrosomal protein 350kDa 	ENST00000491495.2|CEP350|ENSG00000135837.11|centrosomal protein 350kDa
hg19_v2_chr12_-_96794143_96794264	0.00694223	UCACAUU	ENST00000543119.2|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr5_-_74326724_74326724	0.00693121	UCACAUU	ENST00000322348.4|GCNT4|ENSG00000176928.4|glucosaminyl (N-acetyl) transferase 4, core 2
hg19_v2_chr10_-_32636106_32636150	0.00600419	UCACAUU	ENST00000263062.8|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila) 	ENST00000319778.6|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr7_+_65670186_65670309	0.00599405	UCACAUU	ENST00000304842.5|TPST1|ENSG00000169902.9|tyrosylprotein sulfotransferase 1 	ENST00000442120.1|TPST1|ENSG00000169902.9|tyrosylprotein sulfotransferase 1
hg19_v2_chr1_-_113161730_113161811	0.00568241	UCACAUU	ENST00000544629.1|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like 	ENST00000543570.1|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like 	ENST00000360743.4|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like 	ENST00000490067.1|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like 	ENST00000343210.7|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like 	ENST00000369666.1|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like
hg19_v2_chr11_+_33278811_33279133	0.00557622	UCACAUU	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr12_+_19592602_19592648	0.00527924	UCACAUU	ENST00000398864.3|AEBP2|ENSG00000139154.10|AE binding protein 2 	ENST00000266508.9|AEBP2|ENSG00000139154.10|AE binding protein 2
hg19_v2_chrX_+_12156582_12156603	0.0047912	UCACAUU	ENST00000380682.1|FRMPD4|ENSG00000169933.8|FERM and PDZ domain containing 4
hg19_v2_chr19_-_17799008_17799122	0.00452917	UCACAUU	ENST00000519716.2|UNC13A|ENSG00000130477.10|unc-13 homolog A (C. elegans)
hg19_v2_chr7_-_123389104_123389161	0.00446174	UCACAUU	ENST00000223023.4|WASL|ENSG00000106299.7|Wiskott-Aldrich syndrome-like
hg19_v2_chr4_-_142053952_142053996	0.0044462	UCACAUU	ENST00000515673.2|RNF150|ENSG00000170153.6|ring finger protein 150
hg19_v2_chr2_+_24714729_24714927	0.00405069	UCACAUU	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr12_+_72056773_72056796	0.003805	UCACAUU	ENST00000308086.2|THAP2|ENSG00000173451.2|THAP domain containing, apoptosis associated protein 2
hg19_v2_chr4_+_72204755_72204778	0.00372168	UCACAUU	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr5_-_145214848_145214886	0.0035576	UCACAUU	ENST00000505416.1|PRELID2|ENSG00000186314.7|PRELI domain containing 2 	ENST00000334744.4|PRELID2|ENSG00000186314.7|PRELI domain containing 2 	ENST00000358004.2|PRELID2|ENSG00000186314.7|PRELI domain containing 2 	ENST00000511435.1|PRELID2|ENSG00000186314.7|PRELI domain containing 2
hg19_v2_chr3_+_38495333_38495422	0.00349276	UCACAUU	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chrX_+_110339439_110339605	0.003444	UCACAUU	ENST00000372010.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000519681.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000372007.5|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v2_chr3_-_171178157_171178225	0.00324499	UCACAUU	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr11_+_12695944_12695989	0.00272922	UCACAUU	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr1_+_167190066_167190156	0.00269848	UCACAUU	ENST00000367866.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000429375.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000452019.1|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000420254.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000541643.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1
hg19_v2_chr17_+_1958388_1958404	0.00252446	UCACAUU	ENST00000399849.3|HIC1|ENSG00000177374.8|hypermethylated in cancer 1
hg19_v2_chr4_+_147560042_147560046	0.00250625	UCACAUU	ENST00000281321.3|POU4F2|ENSG00000151615.3|POU class 4 homeobox 2
hg19_v2_chr1_+_46972668_46972669	0.00247753	UCACAUU	ENST00000371956.4|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1 	ENST00000360032.3|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1
hg19_v2_chr17_-_56494713_56494851	0.0021806	UCACAUU	ENST00000407977.2|RNF43|ENSG00000108375.8|ring finger protein 43
hg19_v2_chr16_-_58231782_58231856	0.00183014	UCACAUU	ENST00000565188.1|CSNK2A2|ENSG00000070770.4|casein kinase 2, alpha prime polypeptide 	ENST00000262506.3|CSNK2A2|ENSG00000070770.4|casein kinase 2, alpha prime polypeptide
hg19_v2_chr17_+_43224684_43224684	0.00154257	UCACAUU	ENST00000332499.2|HEXIM1|ENSG00000186834.2|hexamethylene bis-acetamide inducible 1
hg19_v2_chr2_+_85766280_85766299	0.00133183	UCACAUU	ENST00000306434.3|MAT2A|ENSG00000168906.8|methionine adenosyltransferase II, alpha
hg19_v2_chr13_+_108921977_108922082	0.00101161	UCACAUU	ENST00000430559.1|TNFSF13B|ENSG00000102524.7|tumor necrosis factor (ligand) superfamily, member 13b 	ENST00000375887.4|TNFSF13B|ENSG00000102524.7|tumor necrosis factor (ligand) superfamily, member 13b
hg19_v2_chrX_-_132095419_132095426	0.000620423	UCACAUU	ENST00000370836.2|HS6ST2|ENSG00000171004.13|heparan sulfate 6-O-sulfotransferase 2 	ENST00000521489.1|HS6ST2|ENSG00000171004.13|heparan sulfate 6-O-sulfotransferase 2
hg19_v2_chr8_-_94753229_94753263	0.00039432	UCACAUU	ENST00000518597.1|RBM12B|ENSG00000183808.7|RNA binding motif protein 12B 	ENST00000399300.2|RBM12B|ENSG00000183808.7|RNA binding motif protein 12B 	ENST00000517700.1|RBM12B|ENSG00000183808.7|RNA binding motif protein 12B
hg19_v2_chr12_+_13197218_13197293	0.000223346	UCACAUU	ENST00000197268.8|KIAA1467|ENSG00000084444.9|KIAA1467
hg19_v2_chr17_-_65241281_65241326	0.000117386	UCACAUU	ENST00000358691.5|HELZ|ENSG00000198265.7|helicase with zinc finger 	ENST00000580168.1|HELZ|ENSG00000198265.7|helicase with zinc finger
