hg19_v2_chr7_-_110174754_110174811	0.475087	SOX1	ENST00000435466.1|AC003088.1|ENSG00000226965.1|AC003088.1
hg19_v2_chr19_-_6057282_6057313	0.468312	SOX1	ENST00000592281.1|RFX2|ENSG00000087903.8|regulatory factor X, 2 (influences HLA class II expression)
hg19_v2_chr11_-_111649074_111649123	0.426983	SOX1	ENST00000534218.1|RP11-108O10.2|ENSG00000254990.1|RP11-108O10.2
hg19_v2_chr9_-_85882145_85882202	0.382983	SOX1	ENST00000328788.1|FRMD3|ENSG00000172159.11|FERM domain containing 3
hg19_v2_chr6_+_26183958_26184005	0.353369	SOX1	ENST00000356530.3|HIST1H2BE|ENSG00000197697.3|histone cluster 1, H2be
hg19_v2_chr3_-_107596910_107596940	0.30646	SOX1	ENST00000464359.2|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000464823.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000466155.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000473528.2|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000608306.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000488852.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000608137.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000608307.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000609429.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000601385.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000475362.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000600240.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000600749.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635
hg19_v2_chr6_+_27833034_27833103	0.282471	SOX1	ENST00000357320.2|HIST1H2AL|ENSG00000198374.3|histone cluster 1, H2al
hg19_v2_chr7_-_139756791_139756791	0.266849	SOX1	ENST00000489809.1|PARP12|ENSG00000059378.8|poly (ADP-ribose) polymerase family, member 12
hg19_v2_chr9_-_13165457_13165506	0.260786	SOX1	ENST00000542239.1|MPDZ|ENSG00000107186.12|multiple PDZ domain protein 	ENST00000538841.1|MPDZ|ENSG00000107186.12|multiple PDZ domain protein 	ENST00000433359.2|MPDZ|ENSG00000107186.12|multiple PDZ domain protein
hg19_v2_chr20_-_14318248_14318264	0.242579	SOX1	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr2_+_102615416_102615459	0.225278	SOX1	ENST00000393414.2|IL1R2|ENSG00000115590.9|interleukin 1 receptor, type II
hg19_v2_chr6_-_15548591_15548607	0.219706	SOX1	ENST00000509674.1|DTNBP1|ENSG00000047579.15|dystrobrevin binding protein 1
hg19_v2_chr14_-_74417096_74417117	0.218598	SOX1	ENST00000286544.3|FAM161B|ENSG00000156050.4|family with sequence similarity 161, member B
hg19_v2_chr6_+_148593425_148593498	0.218006	SOX1	ENST00000367469.1|SASH1|ENSG00000111961.12|SAM and SH3 domain containing 1
hg19_v2_chr17_-_15519008_15519008	0.216682	SOX1	ENST00000261644.8|CDRT1|ENSG00000241322.4|CMT1A duplicated region transcript 1
hg19_v2_chr5_-_16916624_16916641	0.21133	SOX1	ENST00000513882.1|MYO10|ENSG00000145555.10|myosin X
hg19_v2_chr1_+_12806141_12806199	0.205986	SOX1	ENST00000288048.5|C1orf158|ENSG00000157330.5|chromosome 1 open reading frame 158
hg19_v2_chr11_+_125496619_125496646	0.196232	SOX1	ENST00000532669.1|CHEK1|ENSG00000149554.8|checkpoint kinase 1 	ENST00000278916.3|CHEK1|ENSG00000149554.8|checkpoint kinase 1
hg19_v2_chr3_+_132316081_132316102	0.182672	SOX1	ENST00000249887.2|ACKR4|ENSG00000129048.6|atypical chemokine receptor 4
hg19_v2_chr12_+_57810198_57810198	0.167151	SOX1	ENST00000598001.1|AC126614.1|ENSG00000268367.1|HCG1818482; Uncharacterized protein
hg19_v2_chr20_-_48747662_48747704	0.161079	SOX1	ENST00000371656.2|TMEM189|ENSG00000240849.6|transmembrane protein 189
hg19_v2_chr5_+_158654712_158654727	0.159893	SOX1	ENST00000520323.1|CTB-11I22.2|ENSG00000253315.1|CTB-11I22.2
hg19_v2_chr3_+_138327542_138327693	0.15754	SOX1	ENST00000360570.3|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule 	ENST00000393035.2|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule
hg19_v2_chr15_+_57540230_57540239	0.153583	SOX1	ENST00000559703.1|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr19_+_35842445_35842445	0.150995	SOX1	ENST00000246553.2|FFAR1|ENSG00000126266.2|free fatty acid receptor 1
hg19_v2_chrX_+_11129388_11129485	0.149542	SOX1	ENST00000321143.4|HCCS|ENSG00000004961.10|holocytochrome c synthase 	ENST00000380763.3|HCCS|ENSG00000004961.10|holocytochrome c synthase 	ENST00000380762.4|HCCS|ENSG00000004961.10|holocytochrome c synthase
hg19_v2_chr1_+_65613340_65613370	0.143598	SOX1	ENST00000546702.1|AK4|ENSG00000162433.10|adenylate kinase 4
hg19_v2_chr12_-_11150474_11150474	0.143359	SOX1	ENST00000538986.1|TAS2R20|ENSG00000255837.1|taste receptor, type 2, member 20
hg19_v2_chr4_+_156680153_156680242	0.141454	SOX1	ENST00000502959.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000505764.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000507146.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000264424.8|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000503520.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3
hg19_v2_chr11_-_111649015_111649030	0.140192	SOX1	ENST00000529841.1|RP11-108O10.2|ENSG00000254990.1|RP11-108O10.2
hg19_v2_chr14_-_89878369_89878496	0.138791	SOX1	ENST00000553840.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000556916.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr19_-_10491130_10491220	0.137817	SOX1	ENST00000530829.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000529370.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chrX_+_129040094_129040112	0.136202	SOX1	ENST00000425117.2|UTP14A|ENSG00000156697.8|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
hg19_v2_chr3_-_189840223_189840229	0.135501	SOX1	ENST00000427335.2|LEPREL1|ENSG00000090530.5|leprecan-like 1
hg19_v2_chr6_-_138866823_138866851	0.133715	SOX1	ENST00000342260.5|NHSL1|ENSG00000135540.7|NHS-like 1
hg19_v2_chr4_+_172734548_172734654	0.130516	SOX1	ENST00000506823.1|GALNTL6|ENSG00000174473.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
hg19_v2_chr1_-_43638168_43638241	0.129748	SOX1	ENST00000431635.2|EBNA1BP2|ENSG00000117395.6|EBNA1 binding protein 2
hg19_v2_chr19_+_38880252_38880252	0.127799	SOX1	ENST00000586301.1|SPRED3|ENSG00000188766.8|sprouty-related, EVH1 domain containing 3
hg19_v2_chr11_-_113577052_113577095	0.122047	SOX1	ENST00000540540.1|TMPRSS5|ENSG00000166682.6|transmembrane protease, serine 5 	ENST00000545579.1|TMPRSS5|ENSG00000166682.6|transmembrane protease, serine 5 	ENST00000538955.1|TMPRSS5|ENSG00000166682.6|transmembrane protease, serine 5 	ENST00000299882.5|TMPRSS5|ENSG00000166682.6|transmembrane protease, serine 5
hg19_v2_chr19_+_21324863_21324880	0.118454	SOX1	ENST00000598331.1|ZNF431|ENSG00000196705.4|zinc finger protein 431
hg19_v2_chr19_+_21324827_21324855	0.115855	SOX1	ENST00000600692.1|ZNF431|ENSG00000196705.4|zinc finger protein 431 	ENST00000599296.1|ZNF431|ENSG00000196705.4|zinc finger protein 431 	ENST00000594425.1|ZNF431|ENSG00000196705.4|zinc finger protein 431 	ENST00000311048.7|ZNF431|ENSG00000196705.4|zinc finger protein 431
hg19_v2_chr6_+_149539767_149539834	0.115371	SOX1	ENST00000606202.1|TAB2|ENSG00000055208.13|TGF-beta activated kinase 1/MAP3K7 binding protein 2 	ENST00000536230.1|TAB2|ENSG00000055208.13|TGF-beta activated kinase 1/MAP3K7 binding protein 2 	ENST00000445901.1|RP1-111D6.3|ENSG00000228408.1|RP1-111D6.3
hg19_v2_chr11_-_47400032_47400043	0.114264	SOX1	ENST00000533968.1|SPI1|ENSG00000066336.7|spleen focus forming virus (SFFV) proviral integration oncogene
hg19_v2_chr14_+_20811722_20811741	0.111981	SOX1	ENST00000429687.3|PARP2|ENSG00000129484.9|poly (ADP-ribose) polymerase 2
hg19_v2_chr10_-_73976884_73976894	0.109518	SOX1	ENST00000317126.4|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000545550.1|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1
hg19_v2_chr14_+_38033252_38033405	0.106047	SOX1	ENST00000554829.1|RP11-356O9.1|ENSG00000258414.1|RP11-356O9.1
hg19_v2_chr7_+_36450169_36450224	0.103994	SOX1	ENST00000428612.1|ANLN|ENSG00000011426.6|anillin, actin binding protein
hg19_v2_chr12_-_110434096_110434139	0.103464	SOX1	ENST00000320063.9|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000457474.2|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000547815.1|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000361006.5|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2
hg19_v2_chr3_+_158362299_158362494	0.101945	SOX1	ENST00000478576.1|GFM1|ENSG00000168827.10|G elongation factor, mitochondrial 1 	ENST00000264263.5|GFM1|ENSG00000168827.10|G elongation factor, mitochondrial 1 	ENST00000464732.1|GFM1|ENSG00000168827.10|G elongation factor, mitochondrial 1
hg19_v2_chr3_-_33686925_33687000	0.100401	SOX1	ENST00000485378.2|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000313350.6|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000487200.1|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr10_-_73976025_73976074	0.0992786	SOX1	ENST00000342444.4|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000533958.1|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000527593.1|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000394915.3|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000530461.1|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000317168.6|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000524829.1|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1
hg19_v2_chrX_+_114874727_114874755	0.0991953	SOX1	ENST00000543070.1|PLS3|ENSG00000102024.13|plastin 3
hg19_v2_chr4_-_74486347_74486348	0.0971819	SOX1	ENST00000342081.3|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr3_-_16524357_16524377	0.0962002	SOX1	ENST00000432519.1|RFTN1|ENSG00000131378.9|raftlin, lipid raft linker 1
hg19_v2_chr1_+_240255166_240255197	0.0960958	SOX1	ENST00000319653.9|FMN2|ENSG00000155816.15|formin 2
hg19_v2_chr12_+_7456880_7456880	0.0938762	SOX1	ENST00000399422.4|ACSM4|ENSG00000215009.5|acyl-CoA synthetase medium-chain family member 4
hg19_v2_chr1_+_144811943_144811943	0.0887602	SOX1	ENST00000281815.8|NBPF9|ENSG00000168614.13|neuroblastoma breakpoint family, member 9
hg19_v2_chrX_+_129040122_129040174	0.0832696	SOX1	ENST00000394422.3|UTP14A|ENSG00000156697.8|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) 	ENST00000371051.5|UTP14A|ENSG00000156697.8|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
hg19_v2_chr10_+_23384435_23384479	0.0823899	SOX1	ENST00000376510.3|MSRB2|ENSG00000148450.8|methionine sulfoxide reductase B2
hg19_v2_chr2_-_163175133_163175222	0.082139	SOX1	ENST00000421365.2|IFIH1|ENSG00000115267.5|interferon induced with helicase C domain 1 	ENST00000263642.2|IFIH1|ENSG00000115267.5|interferon induced with helicase C domain 1
hg19_v2_chr19_+_17830051_17830317	0.0785441	SOX1	ENST00000594625.1|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S 	ENST00000324096.4|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S 	ENST00000600186.1|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S 	ENST00000597735.1|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S
hg19_v2_chr4_-_122686261_122686340	0.0780034	SOX1	ENST00000337677.5|TMEM155|ENSG00000164112.8|transmembrane protein 155
hg19_v2_chr14_+_74417192_74417227	0.0773159	SOX1	ENST00000554320.1|COQ6|ENSG00000119723.11|coenzyme Q6 monooxygenase
hg19_v2_chr21_-_16126181_16126192	0.0771783	SOX1	ENST00000455253.2|AF127936.3|ENSG00000232884.3|AF127936.3
hg19_v2_chr4_-_74486217_74486273	0.0763742	SOX1	ENST00000335049.5|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6 	ENST00000307439.5|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr10_+_47894572_47894572	0.0761793	SOX1	ENST00000355876.5|FAM21B|ENSG00000152726.14|family with sequence similarity 21, member B
hg19_v2_chr11_-_113577014_113577048	0.0753461	SOX1	ENST00000544634.1|TMPRSS5|ENSG00000166682.6|transmembrane protease, serine 5 	ENST00000539732.1|TMPRSS5|ENSG00000166682.6|transmembrane protease, serine 5 	ENST00000538770.1|TMPRSS5|ENSG00000166682.6|transmembrane protease, serine 5 	ENST00000536856.1|TMPRSS5|ENSG00000166682.6|transmembrane protease, serine 5 	ENST00000544476.1|TMPRSS5|ENSG00000166682.6|transmembrane protease, serine 5
hg19_v2_chr3_-_171489085_171489158	0.0738307	SOX1	ENST00000418087.1|PLD1|ENSG00000075651.11|phospholipase D1, phosphatidylcholine-specific
hg19_v2_chr17_+_75316336_75316406	0.0729287	SOX1	ENST00000591934.1|SEPT9|ENSG00000184640.13|septin 9
hg19_v2_chr10_+_15085895_15085914	0.0722382	SOX1	ENST00000378228.3|OLAH|ENSG00000152463.10|oleoyl-ACP hydrolase
hg19_v2_chr18_-_51751132_51751158	0.0707993	SOX1	ENST00000256429.3|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr17_+_80816395_80816472	0.0701869	SOX1	ENST00000576160.2|TBCD|ENSG00000141556.16|tubulin folding cofactor D 	ENST00000571712.1|TBCD|ENSG00000141556.16|tubulin folding cofactor D
hg19_v2_chr3_-_126327398_126327398	0.0699704	SOX1	ENST00000383572.2|TXNRD3NB|ENSG00000206483.4|thioredoxin reductase 3 neighbor
hg19_v2_chr5_+_175740083_175740136	0.0664732	SOX1	ENST00000332772.4|SIMC1|ENSG00000170085.13|SUMO-interacting motifs containing 1
hg19_v2_chr15_+_59903975_59903992	0.0641215	SOX1	ENST00000560585.1|GCNT3|ENSG00000140297.8|glucosaminyl (N-acetyl) transferase 3, mucin type 	ENST00000396065.1|GCNT3|ENSG00000140297.8|glucosaminyl (N-acetyl) transferase 3, mucin type
hg19_v2_chr13_-_22178284_22178353	0.060328	SOX1	ENST00000468222.2|MICU2|ENSG00000165487.9|mitochondrial calcium uptake 2 	ENST00000382374.4|MICU2|ENSG00000165487.9|mitochondrial calcium uptake 2
hg19_v2_chr14_-_20801427_20801457	0.0580777	SOX1	ENST00000557665.1|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 	ENST00000358932.4|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 	ENST00000353689.4|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase
hg19_v2_chr2_+_11864458_11864481	0.0580387	SOX1	ENST00000396098.1|LPIN1|ENSG00000134324.7|lipin 1 	ENST00000396099.1|LPIN1|ENSG00000134324.7|lipin 1 	ENST00000425416.2|LPIN1|ENSG00000134324.7|lipin 1
hg19_v2_chr2_+_171036635_171036673	0.0580358	SOX1	ENST00000484338.2|MYO3B|ENSG00000071909.14|myosin IIIB 	ENST00000334231.6|MYO3B|ENSG00000071909.14|myosin IIIB
hg19_v2_chr14_+_35514323_35514356	0.0558703	SOX1	ENST00000555211.1|FAM177A1|ENSG00000151327.8|family with sequence similarity 177, member A1
hg19_v2_chr11_+_29181503_29181639	0.0520776	SOX1	ENST00000530960.1|RP11-466I1.1|ENSG00000254526.1|RP11-466I1.1
hg19_v2_chr1_-_212004090_212004168	0.051098	SOX1	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chr12_-_110434183_110434194	0.0500365	SOX1	ENST00000360185.4|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000354574.4|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000338373.5|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000343646.5|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000356259.4|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000553118.1|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2
hg19_v2_chr2_-_200320768_200320811	0.0498054	SOX1	ENST00000428695.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr2_+_171034646_171034706	0.0485523	SOX1	ENST00000409044.3|MYO3B|ENSG00000071909.14|myosin IIIB 	ENST00000408978.4|MYO3B|ENSG00000071909.14|myosin IIIB
hg19_v2_chr3_-_44519131_44519186	0.0484433	SOX1	ENST00000425708.2|ZNF445|ENSG00000185219.11|zinc finger protein 445 	ENST00000396077.2|ZNF445|ENSG00000185219.11|zinc finger protein 445
hg19_v2_chr15_+_76196234_76196466	0.0460567	SOX1	ENST00000540507.1|FBXO22|ENSG00000167196.9|F-box protein 22 	ENST00000565036.1|FBXO22|ENSG00000167196.9|F-box protein 22 	ENST00000569054.1|FBXO22|ENSG00000167196.9|F-box protein 22
hg19_v2_chr10_-_43892668_43892794	0.0444845	SOX1	ENST00000544000.1|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr16_-_1538765_1538982	0.0437899	SOX1	ENST00000447419.2|PTX4|ENSG00000251692.3|pentraxin 4, long 	ENST00000440447.2|PTX4|ENSG00000251692.3|pentraxin 4, long
hg19_v2_chr20_+_49575342_49575391	0.0418641	SOX1	ENST00000244051.1|MOCS3|ENSG00000124217.3|molybdenum cofactor synthesis 3
hg19_v2_chr17_-_15168624_15168650	0.0414168	SOX1	ENST00000312280.3|PMP22|ENSG00000109099.9|peripheral myelin protein 22 	ENST00000494511.1|PMP22|ENSG00000109099.9|peripheral myelin protein 22 	ENST00000580584.1|PMP22|ENSG00000109099.9|peripheral myelin protein 22
hg19_v2_chr11_+_125496400_125496464	0.0411031	SOX1	ENST00000524737.1|CHEK1|ENSG00000149554.8|checkpoint kinase 1
hg19_v2_chr1_-_200379104_200379128	0.040718	SOX1	ENST00000367352.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr1_-_89641680_89641723	0.0397767	SOX1	ENST00000294671.2|GBP7|ENSG00000213512.1|guanylate binding protein 7
hg19_v2_chr7_-_76955563_76955591	0.0396322	SOX1	ENST00000441833.2|GSAP|ENSG00000186088.11|gamma-secretase activating protein
hg19_v2_chr19_+_3762645_3762690	0.0330295	SOX1	ENST00000330133.4|MRPL54|ENSG00000183617.4|mitochondrial ribosomal protein L54
hg19_v2_chr22_+_32149927_32150081	0.0316982	SOX1	ENST00000437411.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000535622.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000536766.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400242.3|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000266091.3|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400249.2|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400246.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000382105.2|DEPDC5|ENSG00000100150.12|DEP domain containing 5
hg19_v2_chr14_+_62164340_62164443	0.0314587	SOX1	ENST00000557538.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 	ENST00000539097.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v2_chr2_+_234296792_234296806	0.0297444	SOX1	ENST00000409813.3|DGKD|ENSG00000077044.5|diacylglycerol kinase, delta 130kDa
hg19_v2_chr5_+_135383008_135383107	0.0287439	SOX1	ENST00000508767.1|TGFBI|ENSG00000120708.12|transforming growth factor, beta-induced, 68kDa 	ENST00000604555.1|TGFBI|ENSG00000120708.12|transforming growth factor, beta-induced, 68kDa
hg19_v2_chr3_+_127770455_127770491	0.0270169	SOX1	ENST00000464451.1|SEC61A1|ENSG00000058262.5|Sec61 alpha 1 subunit (S. cerevisiae)
hg19_v2_chr9_-_2844058_2844241	0.0250918	SOX1	ENST00000397885.2|KIAA0020|ENSG00000080608.9|KIAA0020
hg19_v2_chr1_+_46805832_46805874	0.0241059	SOX1	ENST00000474844.1|NSUN4|ENSG00000117481.6|NOP2/Sun domain family, member 4
hg19_v2_chr20_-_49575058_49575077	0.0240605	SOX1	ENST00000371584.4|DPM1|ENSG00000000419.8|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit 	ENST00000371583.5|DPM1|ENSG00000000419.8|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit 	ENST00000413082.1|DPM1|ENSG00000000419.8|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
hg19_v2_chr1_-_200379129_200379174	0.0220093	SOX1	ENST00000367353.1|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr1_+_24646263_24646304	0.0207796	SOX1	ENST00000524724.1|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chrX_+_106163626_106163638	0.0196291	SOX1	ENST00000336803.1|CLDN2|ENSG00000165376.6|claudin 2
hg19_v2_chr6_-_130543958_130544105	0.0181633	SOX1	ENST00000437477.2|SAMD3|ENSG00000164483.12|sterile alpha motif domain containing 3 	ENST00000439090.2|SAMD3|ENSG00000164483.12|sterile alpha motif domain containing 3
hg19_v2_chr12_-_10607084_10607284	0.0160154	SOX1	ENST00000408006.3|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1 	ENST00000544822.1|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1 	ENST00000536188.1|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1
hg19_v2_chr19_+_49588677_49588688	0.0159577	SOX1	ENST00000598984.1|SNRNP70|ENSG00000104852.10|small nuclear ribonucleoprotein 70kDa (U1) 	ENST00000598441.1|SNRNP70|ENSG00000104852.10|small nuclear ribonucleoprotein 70kDa (U1)
hg19_v2_chr1_-_52499443_52499499	0.0158205	SOX1	ENST00000371614.1|KTI12|ENSG00000198841.3|KTI12 homolog, chromatin associated (S. cerevisiae)
hg19_v2_chr20_-_49575081_49575092	0.0153306	SOX1	ENST00000371588.5|DPM1|ENSG00000000419.8|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit 	ENST00000371582.4|DPM1|ENSG00000000419.8|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
hg19_v2_chr1_+_65613217_65613331	0.0150614	SOX1	ENST00000545314.1|AK4|ENSG00000162433.10|adenylate kinase 4
hg19_v2_chr3_+_136676707_136676810	0.014637	SOX1	ENST00000329582.4|IL20RB|ENSG00000174564.8|interleukin 20 receptor beta
hg19_v2_chr8_-_102181718_102181857	0.0133389	SOX1	ENST00000565617.1|KB-1460A1.5|ENSG00000261087.1|KB-1460A1.5
hg19_v2_chr11_-_6790286_6790286	0.012982	SOX1	ENST00000338569.2|OR2AG2|ENSG00000188124.2|olfactory receptor, family 2, subfamily AG, member 2
hg19_v2_chr6_+_124125286_124125362	0.0101912	SOX1	ENST00000368416.1|NKAIN2|ENSG00000188580.9|Na+/K+ transporting ATPase interacting 2 	ENST00000368417.1|NKAIN2|ENSG00000188580.9|Na+/K+ transporting ATPase interacting 2 	ENST00000546092.1|NKAIN2|ENSG00000188580.9|Na+/K+ transporting ATPase interacting 2
hg19_v2_chr12_-_10605929_10605982	0.00999229	SOX1	ENST00000347831.5|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1 	ENST00000359151.3|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1
hg19_v2_chr11_-_76381781_76381798	0.00976806	SOX1	ENST00000260061.5|LRRC32|ENSG00000137507.7|leucine rich repeat containing 32 	ENST00000404995.1|LRRC32|ENSG00000137507.7|leucine rich repeat containing 32
hg19_v2_chr11_-_57177586_57177586	0.00976291	SOX1	ENST00000529411.1|RP11-872D17.8|ENSG00000254979.1|Uncharacterized protein
hg19_v2_chr16_-_18937072_18937072	0.0092573	SOX1	ENST00000569122.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr3_+_126113734_126113794	0.00894642	SOX1	ENST00000352312.1|CCDC37|ENSG00000163885.7|coiled-coil domain containing 37 	ENST00000393425.1|CCDC37|ENSG00000163885.7|coiled-coil domain containing 37
hg19_v2_chr4_-_170924888_170924950	0.00780483	SOX1	ENST00000502832.1|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like 	ENST00000393704.3|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like
hg19_v2_chr9_-_123638633_123638711	0.00689392	SOX1	ENST00000456291.1|PHF19|ENSG00000119403.9|PHD finger protein 19
hg19_v2_chr1_+_202789394_202789394	0.0065027	SOX1	ENST00000330493.5|RP11-480I12.4|ENSG00000184774.6|Putative inactive alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein LOC641515
hg19_v2_chr9_-_104249400_104249512	0.00588379	SOX1	ENST00000374848.3|TMEM246|ENSG00000165152.4|transmembrane protein 246
hg19_v2_chr19_-_44388116_44388116	0.00519887	SOX1	ENST00000587539.1|ZNF404|ENSG00000176222.7|zinc finger protein 404
hg19_v2_chr19_-_10491234_10491352	0.00492051	SOX1	ENST00000524462.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000531836.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000525621.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chr22_-_17302589_17302589	0.00470715	SOX1	ENST00000331428.5|XKR3|ENSG00000172967.7|XK, Kell blood group complex subunit-related family, member 3
hg19_v2_chr8_+_80209929_80209952	0.00330437	SOX1	ENST00000519983.1|RP11-1114I9.1|ENSG00000253659.1|RP11-1114I9.1
hg19_v2_chr1_+_70876926_70877066	0.00186014	SOX1	ENST00000370938.3|CTH|ENSG00000116761.7|cystathionase (cystathionine gamma-lyase) 	ENST00000346806.2|CTH|ENSG00000116761.7|cystathionase (cystathionine gamma-lyase)
hg19_v2_chr18_+_6834472_6834495	0.00165385	SOX1	ENST00000581099.1|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28 	ENST00000419673.2|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28 	ENST00000531294.1|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28
hg19_v2_chr1_-_19578003_19578046	0.00115836	SOX1	ENST00000375199.3|EMC1|ENSG00000127463.9|ER membrane protein complex subunit 1 	ENST00000375208.3|EMC1|ENSG00000127463.9|ER membrane protein complex subunit 1 	ENST00000356068.2|EMC1|ENSG00000127463.9|ER membrane protein complex subunit 1 	ENST00000477853.1|EMC1|ENSG00000127463.9|ER membrane protein complex subunit 1
