hg19_v2_chr1_-_149785236_149785236	0.896737	NKX3-1	ENST00000331491.1|HIST2H3D|ENSG00000183598.3|histone cluster 2, H3d
hg19_v2_chr10_-_99185798_99185831	0.39162	NKX3-1	ENST00000439965.2|AL355490.1|ENSG00000224474.2|LOC644215 protein; Uncharacterized protein
hg19_v2_chr2_-_37374876_37374949	0.349993	NKX3-1	ENST00000405334.1|EIF2AK2|ENSG00000055332.12|eukaryotic translation initiation factor 2-alpha kinase 2
hg19_v2_chr16_+_47496023_47496116	0.342438	NKX3-1	ENST00000567200.1|PHKB|ENSG00000102893.11|phosphorylase kinase, beta
hg19_v2_chr12_+_113354341_113354422	0.331323	NKX3-1	ENST00000553152.1|OAS1|ENSG00000089127.8|2'-5'-oligoadenylate synthetase 1, 40/46kDa
hg19_v2_chr4_+_17579110_17579130	0.29461	NKX3-1	ENST00000606142.1|LAP3|ENSG00000002549.8|leucine aminopeptidase 3
hg19_v2_chr5_+_68485433_68485569	0.25826	NKX3-1	ENST00000502689.1|CENPH|ENSG00000153044.5|centromere protein H
hg19_v2_chr12_-_118628315_118628348	0.25193	NKX3-1	ENST00000540561.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr6_+_42928485_42928496	0.24939	NKX3-1	ENST00000372808.3|GNMT|ENSG00000124713.5|glycine N-methyltransferase
hg19_v2_chr6_+_26217159_26217170	0.234089	NKX3-1	ENST00000303910.2|HIST1H2AE|ENSG00000168274.3|histone cluster 1, H2ae
hg19_v2_chr21_+_35736302_35736323	0.226274	NKX3-1	ENST00000290310.3|KCNE2|ENSG00000159197.3|potassium voltage-gated channel, Isk-related family, member 2
hg19_v2_chr12_+_109569155_109569172	0.215023	NKX3-1	ENST00000539864.1|ACACB|ENSG00000076555.11|acetyl-CoA carboxylase beta
hg19_v2_chr1_-_89488510_89488565	0.201105	NKX3-1	ENST00000564665.1|GBP3|ENSG00000117226.7|guanylate binding protein 3 	ENST00000370481.4|GBP3|ENSG00000117226.7|guanylate binding protein 3
hg19_v2_chr7_-_33080506_33080528	0.20072	NKX3-1	ENST00000381626.2|NT5C3A|ENSG00000122643.14|5'-nucleotidase, cytosolic IIIA 	ENST00000409467.1|NT5C3A|ENSG00000122643.14|5'-nucleotidase, cytosolic IIIA 	ENST00000449201.1|NT5C3A|ENSG00000122643.14|5'-nucleotidase, cytosolic IIIA
hg19_v2_chr14_+_67656110_67656162	0.19855	NKX3-1	ENST00000524532.1|FAM71D|ENSG00000172717.11|family with sequence similarity 71, member D 	ENST00000530728.1|FAM71D|ENSG00000172717.11|family with sequence similarity 71, member D
hg19_v2_chr1_+_196621156_196621192	0.194648	NKX3-1	ENST00000359637.2|CFH|ENSG00000000971.11|complement factor H
hg19_v2_chr18_+_61445007_61445021	0.18631	NKX3-1	ENST00000447428.1|SERPINB7|ENSG00000166396.8|serpin peptidase inhibitor, clade B (ovalbumin), member 7 	ENST00000546027.1|SERPINB7|ENSG00000166396.8|serpin peptidase inhibitor, clade B (ovalbumin), member 7
hg19_v2_chr15_-_31521567_31521649	0.17716	NKX3-1	ENST00000560812.1|RP11-16E12.2|ENSG00000259772.2|RP11-16E12.2	ENST00000559853.1|RP11-16E12.2|ENSG00000259772.2|RP11-16E12.2	ENST00000558109.1|RP11-16E12.2|ENSG00000259772.2|RP11-16E12.2
hg19_v2_chr6_+_149887377_149887430	0.174593	NKX3-1	ENST00000367419.5|GINM1|ENSG00000055211.8|glycoprotein integral membrane 1
hg19_v2_chr15_+_63682335_63682429	0.171363	NKX3-1	ENST00000559379.1|RP11-321G12.1|ENSG00000259459.1|RP11-321G12.1	ENST00000559821.1|RP11-321G12.1|ENSG00000259459.1|RP11-321G12.1
hg19_v2_chr14_+_61449197_61449275	0.168125	NKX3-1	ENST00000533744.2|SLC38A6|ENSG00000139974.11|solute carrier family 38, member 6
hg19_v2_chr19_-_12708113_12708125	0.167161	NKX3-1	ENST00000440366.1|ZNF490|ENSG00000188033.5|zinc finger protein 490
hg19_v2_chr1_+_95616933_95616933	0.165903	NKX3-1	ENST00000604203.1|RP11-57H12.6|ENSG00000271092.1|TMEM56-RWDD3 readthrough
hg19_v2_chr3_-_156840776_156840823	0.164032	NKX3-1	ENST00000471357.1|LINC00880|ENSG00000243629.1|long intergenic non-protein coding RNA 880
hg19_v2_chr3_-_10334617_10334637	0.163202	NKX3-1	ENST00000429122.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000425479.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000335542.8|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide
hg19_v2_chr5_+_150404904_150404928	0.161338	NKX3-1	ENST00000521632.1|GPX3|ENSG00000211445.7|glutathione peroxidase 3 (plasma)
hg19_v2_chr1_-_77685084_77685122	0.142367	NKX3-1	ENST00000370812.3|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K 	ENST00000359130.1|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K 	ENST00000445065.1|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K 	ENST00000370813.5|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K
hg19_v2_chr10_+_91461337_91461380	0.141419	NKX3-1	ENST00000260753.4|KIF20B|ENSG00000138182.10|kinesin family member 20B 	ENST00000416354.1|KIF20B|ENSG00000138182.10|kinesin family member 20B 	ENST00000394289.2|KIF20B|ENSG00000138182.10|kinesin family member 20B 	ENST00000371728.3|KIF20B|ENSG00000138182.10|kinesin family member 20B
hg19_v2_chr19_-_42894420_42894451	0.138972	NKX3-1	ENST00000597255.1|CNFN|ENSG00000105427.5|cornifelin 	ENST00000222032.5|CNFN|ENSG00000105427.5|cornifelin
hg19_v2_chr14_-_68066849_68066972	0.137652	NKX3-1	ENST00000558493.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000561272.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H
hg19_v2_chr1_-_60392452_60392499	0.13715	NKX3-1	ENST00000371204.3|CYP2J2|ENSG00000134716.5|cytochrome P450, family 2, subfamily J, polypeptide 2
hg19_v2_chr13_+_115000521_115000536	0.135623	NKX3-1	ENST00000252457.5|CDC16|ENSG00000130177.10|cell division cycle 16 	ENST00000375308.1|CDC16|ENSG00000130177.10|cell division cycle 16
hg19_v2_chr1_+_156338993_156339011	0.135015	NKX3-1	ENST00000368249.1|RHBG|ENSG00000132677.8|Rh family, B glycoprotein (gene/pseudogene) 	ENST00000368246.2|RHBG|ENSG00000132677.8|Rh family, B glycoprotein (gene/pseudogene) 	ENST00000537040.1|RHBG|ENSG00000132677.8|Rh family, B glycoprotein (gene/pseudogene) 	ENST00000400992.2|RHBG|ENSG00000132677.8|Rh family, B glycoprotein (gene/pseudogene) 	ENST00000255013.3|RHBG|ENSG00000132677.8|Rh family, B glycoprotein (gene/pseudogene) 	ENST00000451864.2|RHBG|ENSG00000132677.8|Rh family, B glycoprotein (gene/pseudogene)
hg19_v2_chr16_-_3068171_3068191	0.134058	NKX3-1	ENST00000572154.1|CLDN6|ENSG00000184697.6|claudin 6 	ENST00000328796.4|CLDN6|ENSG00000184697.6|claudin 6
hg19_v2_chr19_+_54609230_54609272	0.127263	NKX3-1	ENST00000420296.1|NDUFA3|ENSG00000170906.11|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa
hg19_v2_chr19_-_44174330_44174502	0.126915	NKX3-1	ENST00000340093.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr1_+_186798073_186798147	0.126554	NKX3-1	ENST00000367466.3|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent) 	ENST00000442353.2|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent)
hg19_v2_chr20_+_2821366_2821410	0.124832	NKX3-1	ENST00000453689.1|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae) 	ENST00000417508.1|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg19_v2_chrX_+_153237740_153237778	0.121065	NKX3-1	ENST00000369982.4|TMEM187|ENSG00000177854.7|transmembrane protein 187
hg19_v2_chr15_-_79576156_79576222	0.12096	NKX3-1	ENST00000560452.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000560872.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000560732.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000559979.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000560533.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000559225.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4
hg19_v2_chr21_-_46964306_46964332	0.120145	NKX3-1	ENST00000443742.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1 	ENST00000528477.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1 	ENST00000567670.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1
hg19_v2_chr14_+_59951161_59951278	0.117764	NKX3-1	ENST00000261247.9|JKAMP|ENSG00000050130.13|JNK1/MAPK8-associated membrane protein 	ENST00000425728.2|JKAMP|ENSG00000050130.13|JNK1/MAPK8-associated membrane protein 	ENST00000556985.1|JKAMP|ENSG00000050130.13|JNK1/MAPK8-associated membrane protein 	ENST00000554271.1|JKAMP|ENSG00000050130.13|JNK1/MAPK8-associated membrane protein 	ENST00000554795.1|JKAMP|ENSG00000050130.13|JNK1/MAPK8-associated membrane protein
hg19_v2_chr16_-_66864806_66864900	0.11742	NKX3-1	ENST00000566336.1|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000394074.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000563185.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000359087.4|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000379463.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000565535.1|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000290810.3|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1
hg19_v2_chr5_-_1799864_1799930	0.117199	NKX3-1	ENST00000510999.1|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36
hg19_v2_chr15_+_85147127_85147142	0.11445	NKX3-1	ENST00000541040.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000538076.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000485222.2|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2
hg19_v2_chr8_+_27169138_27169161	0.11276	NKX3-1	ENST00000522338.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr14_+_97925151_97925207	0.111904	NKX3-1	ENST00000554862.1|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1	ENST00000554260.1|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1	ENST00000499910.2|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1
hg19_v2_chr5_+_34915444_34915481	0.111101	NKX3-1	ENST00000336767.5|BRIX1|ENSG00000113460.8|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
hg19_v2_chr6_-_154751629_154751694	0.110059	NKX3-1	ENST00000424998.1|CNKSR3|ENSG00000153721.13|CNKSR family member 3
hg19_v2_chr22_+_18632666_18632764	0.10993	NKX3-1	ENST00000215794.7|USP18|ENSG00000184979.9|ubiquitin specific peptidase 18
hg19_v2_chr5_-_18746250_18746285	0.108425	NKX3-1	ENST00000512978.1|CTD-2023M8.1|ENSG00000248693.1|CTD-2023M8.1
hg19_v2_chr17_-_55911970_55912121	0.106308	NKX3-1	ENST00000581805.1|RP11-60A24.3|ENSG00000265542.1|RP11-60A24.3	ENST00000580960.1|RP11-60A24.3|ENSG00000265542.1|RP11-60A24.3
hg19_v2_chr5_-_43412418_43412499	0.105589	NKX3-1	ENST00000537013.1|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28 	ENST00000361115.4|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28
hg19_v2_chr1_-_39339777_39339777	0.103373	NKX3-1	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr5_-_77072085_77072139	0.103082	NKX3-1	ENST00000518338.2|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000520039.1|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000306388.6|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000520361.1|TBCA|ENSG00000171530.9|tubulin folding cofactor A
hg19_v2_chr17_+_67498396_67498409	0.100941	NKX3-1	ENST00000588110.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr5_+_96211643_96211697	0.100326	NKX3-1	ENST00000437043.3|ERAP2|ENSG00000164308.12|endoplasmic reticulum aminopeptidase 2 	ENST00000510373.1|ERAP2|ENSG00000164308.12|endoplasmic reticulum aminopeptidase 2
hg19_v2_chr7_+_79765071_79765103	0.100241	NKX3-1	ENST00000457358.2|GNAI1|ENSG00000127955.11|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1
hg19_v2_chr2_+_64068844_64068997	0.100032	NKX3-1	ENST00000337130.5|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr11_-_89956461_89956532	0.0948692	NKX3-1	ENST00000320585.6|CHORDC1|ENSG00000110172.7|cysteine and histidine-rich domain (CHORD) containing 1
hg19_v2_chr19_+_52074502_52074587	0.094282	NKX3-1	ENST00000545217.1|ZNF175|ENSG00000105497.3|zinc finger protein 175 	ENST00000262259.2|ZNF175|ENSG00000105497.3|zinc finger protein 175 	ENST00000596504.1|ZNF175|ENSG00000105497.3|zinc finger protein 175
hg19_v2_chr2_-_187367356_187367356	0.094264	NKX3-1	ENST00000595956.1|AC018867.2|ENSG00000268846.1|AC018867.2
hg19_v2_chr2_+_64069016_64069039	0.092072	NKX3-1	ENST00000488245.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr7_+_23221438_23221487	0.0915435	NKX3-1	ENST00000258742.5|NUPL2|ENSG00000136243.12|nucleoporin like 2
hg19_v2_chr1_-_160232312_160232323	0.0906464	NKX3-1	ENST00000440682.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr7_+_110731062_110731155	0.0890453	NKX3-1	ENST00000308478.5|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3 	ENST00000451085.1|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3 	ENST00000422987.3|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3 	ENST00000421101.1|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3
hg19_v2_chr10_-_104953009_104953061	0.0883135	NKX3-1	ENST00000470299.1|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II 	ENST00000343289.5|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II
hg19_v2_chrX_+_51942963_51942963	0.0882138	NKX3-1	ENST00000375625.3|RP11-363G10.2|ENSG00000179028.4|RP11-363G10.2
hg19_v2_chr20_+_2795626_2795657	0.0879435	NKX3-1	ENST00000603872.1|C20orf141|ENSG00000258713.2|chromosome 20 open reading frame 141 	ENST00000380589.4|C20orf141|ENSG00000258713.2|chromosome 20 open reading frame 141
hg19_v2_chr13_-_48669232_48669267	0.0877829	NKX3-1	ENST00000258648.2|MED4|ENSG00000136146.10|mediator complex subunit 4 	ENST00000378586.1|MED4|ENSG00000136146.10|mediator complex subunit 4
hg19_v2_chr5_+_64920826_64920891	0.0874582	NKX3-1	ENST00000438419.2|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000231526.4|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000505553.1|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000545191.1|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13
hg19_v2_chr7_+_142374104_142374104	0.0869925	NKX3-1	ENST00000604952.1|MTRNR2L6|ENSG00000270672.1|MT-RNR2-like 6
hg19_v2_chr8_+_22414182_22414204	0.0868417	NKX3-1	ENST00000524057.1|SORBS3|ENSG00000120896.9|sorbin and SH3 domain containing 3
hg19_v2_chr19_+_50433476_50433510	0.0861486	NKX3-1	ENST00000596658.1|ATF5|ENSG00000169136.4|activating transcription factor 5
hg19_v2_chr5_+_68485363_68485431	0.0855406	NKX3-1	ENST00000283006.2|CENPH|ENSG00000153044.5|centromere protein H 	ENST00000515001.1|CENPH|ENSG00000153044.5|centromere protein H
hg19_v2_chr14_+_95078714_95078739	0.0838084	NKX3-1	ENST00000393078.3|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 	ENST00000393080.4|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 	ENST00000467132.1|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
hg19_v2_chr1_-_108231101_108231133	0.0823703	NKX3-1	ENST00000544443.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000415432.2|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr11_-_9482010_9482185	0.0817859	NKX3-1	ENST00000596206.1|AC132192.1|ENSG00000268403.1|LOC644656 protein; Uncharacterized protein
hg19_v2_chr16_+_57406368_57406392	0.080336	NKX3-1	ENST00000006053.6|CX3CL1|ENSG00000006210.6|chemokine (C-X3-C motif) ligand 1 	ENST00000563383.1|CX3CL1|ENSG00000006210.6|chemokine (C-X3-C motif) ligand 1
hg19_v2_chr6_+_63921399_63921462	0.0797111	NKX3-1	ENST00000356170.3|FKBP1C|ENSG00000198225.4|FK506 binding protein 1C
hg19_v2_chr12_-_39300071_39300097	0.0788898	NKX3-1	ENST00000550863.1|CPNE8|ENSG00000139117.9|copine VIII
hg19_v2_chrX_-_38186811_38186826	0.0776212	NKX3-1	ENST00000318842.7|RPGR|ENSG00000156313.8|retinitis pigmentosa GTPase regulator
hg19_v2_chr6_-_83775489_83775566	0.077193	NKX3-1	ENST00000369747.3|UBE3D|ENSG00000118420.12|ubiquitin protein ligase E3D
hg19_v2_chr19_-_45457264_45457264	0.0765091	NKX3-1	ENST00000591646.1|CTB-129P6.11|ENSG00000267114.1|Uncharacterized protein
hg19_v2_chrX_-_51797351_51797351	0.0754379	NKX3-1	ENST00000375644.3|RP11-114H20.1|ENSG00000182776.4|RP11-114H20.1
hg19_v2_chr1_+_27114589_27114712	0.0733003	NKX3-1	ENST00000431541.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000449950.2|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000374145.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V
hg19_v2_chr6_+_108616054_108616100	0.0730764	NKX3-1	ENST00000368977.4|LACE1|ENSG00000135537.12|lactation elevated 1
hg19_v2_chr13_+_115000556_115000573	0.0714298	NKX3-1	ENST00000252458.6|CDC16|ENSG00000130177.10|cell division cycle 16
hg19_v2_chr3_-_160117301_160117342	0.0711421	NKX3-1	ENST00000326448.7|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas) 	ENST00000498409.1|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas) 	ENST00000475677.1|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas) 	ENST00000478536.1|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas)
hg19_v2_chr1_-_193029192_193029237	0.0710626	NKX3-1	ENST00000417752.1|UCHL5|ENSG00000116750.9|ubiquitin carboxyl-terminal hydrolase L5 	ENST00000367452.4|UCHL5|ENSG00000116750.9|ubiquitin carboxyl-terminal hydrolase L5
hg19_v2_chr9_-_104145795_104145806	0.0703286	NKX3-1	ENST00000259407.2|BAAT|ENSG00000136881.7|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)
hg19_v2_chr16_-_3074231_3074313	0.070182	NKX3-1	ENST00000572355.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000248089.3|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000574980.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000354679.3|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000396916.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000573842.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent)
hg19_v2_chr3_+_124223586_124223628	0.0698172	NKX3-1	ENST00000393496.1|KALRN|ENSG00000160145.11|kalirin, RhoGEF kinase
hg19_v2_chr17_-_39526052_39526052	0.0692797	NKX3-1	ENST00000251646.3|KRT33B|ENSG00000131738.5|keratin 33B
hg19_v2_chr11_+_9482551_9482604	0.0682109	NKX3-1	ENST00000438144.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000526657.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000299606.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000534265.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000412390.2|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr13_-_48669204_48669231	0.0681867	NKX3-1	ENST00000417167.1|MED4|ENSG00000136146.10|mediator complex subunit 4
hg19_v2_chr1_-_149400542_149400542	0.0678664	NKX3-1	ENST00000392948.2|HIST2H3PS2|ENSG00000203818.6|histone cluster 2, H3, pseudogene 2
hg19_v2_chr14_-_68066975_68067027	0.0669654	NKX3-1	ENST00000559581.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000560722.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000559415.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000216452.4|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H
hg19_v2_chr1_+_218683438_218683438	0.0666513	NKX3-1	ENST00000443836.1|C1orf143|ENSG00000228208.2|chromosome 1 open reading frame 143
hg19_v2_chr5_+_176873446_176873516	0.0664075	NKX3-1	ENST00000507881.1|PRR7|ENSG00000131188.7|proline rich 7 (synaptic)
hg19_v2_chr19_-_2944907_2944981	0.0651088	NKX3-1	ENST00000314531.4|ZNF77|ENSG00000175691.8|zinc finger protein 77
hg19_v2_chr14_-_74551096_74551171	0.0650062	NKX3-1	ENST00000350259.4|ALDH6A1|ENSG00000119711.8|aldehyde dehydrogenase 6 family, member A1
hg19_v2_chr2_-_162931052_162931063	0.0643041	NKX3-1	ENST00000360534.3|DPP4|ENSG00000197635.5|dipeptidyl-peptidase 4
hg19_v2_chr6_+_26020672_26020718	0.0639684	NKX3-1	ENST00000357647.3|HIST1H3A|ENSG00000198366.5|histone cluster 1, H3a
hg19_v2_chr11_+_94277017_94277097	0.0638963	NKX3-1	ENST00000358752.2|FUT4|ENSG00000196371.2|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)
hg19_v2_chr4_-_77996032_77996068	0.0632657	NKX3-1	ENST00000505609.1|CCNI|ENSG00000118816.5|cyclin I
hg19_v2_chr8_-_97247759_97247862	0.0621279	NKX3-1	ENST00000518406.1|UQCRB|ENSG00000156467.5|ubiquinol-cytochrome c reductase binding protein 	ENST00000523920.1|UQCRB|ENSG00000156467.5|ubiquinol-cytochrome c reductase binding protein 	ENST00000287022.5|UQCRB|ENSG00000156467.5|ubiquinol-cytochrome c reductase binding protein
hg19_v2_chr17_+_68101117_68101162	0.0616589	NKX3-1	ENST00000587698.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000587892.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr6_-_57087042_57087128	0.0614396	NKX3-1	ENST00000317483.3|RAB23|ENSG00000112210.7|RAB23, member RAS oncogene family
hg19_v2_chr18_+_61445205_61445227	0.0608407	NKX3-1	ENST00000431370.1|SERPINB7|ENSG00000166396.8|serpin peptidase inhibitor, clade B (ovalbumin), member 7
hg19_v2_chr8_-_38034192_38034217	0.0607391	NKX3-1	ENST00000520755.1|LSM1|ENSG00000175324.5|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chrX_+_71353499_71353499	0.0604196	NKX3-1	ENST00000373677.1|NHSL2|ENSG00000204131.6|NHS-like 2
hg19_v2_chr5_-_1799965_1800009	0.057335	NKX3-1	ENST00000508987.1|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36
hg19_v2_chrX_-_153637612_153637628	0.0568359	NKX3-1	ENST00000369807.1|DNASE1L1|ENSG00000013563.9|deoxyribonuclease I-like 1 	ENST00000369808.3|DNASE1L1|ENSG00000013563.9|deoxyribonuclease I-like 1
hg19_v2_chr5_+_75904950_75904972	0.0567114	NKX3-1	ENST00000502745.1|IQGAP2|ENSG00000145703.11|IQ motif containing GTPase activating protein 2
hg19_v2_chr7_-_143582450_143582475	0.0566494	NKX3-1	ENST00000485416.1|FAM115A|ENSG00000198420.5|family with sequence similarity 115, member A
hg19_v2_chr8_-_27168737_27168836	0.0558643	NKX3-1	ENST00000521253.1|TRIM35|ENSG00000104228.8|tripartite motif containing 35 	ENST00000305364.4|TRIM35|ENSG00000104228.8|tripartite motif containing 35
hg19_v2_chr20_-_271009_271088	0.0557117	NKX3-1	ENST00000382369.5|C20orf96|ENSG00000196476.7|chromosome 20 open reading frame 96
hg19_v2_chr3_+_100428188_100428222	0.0549498	NKX3-1	ENST00000418917.2|TFG|ENSG00000114354.8|TRK-fused gene 	ENST00000490574.1|TFG|ENSG00000114354.8|TRK-fused gene
hg19_v2_chr10_-_32345305_32345376	0.0548786	NKX3-1	ENST00000302418.4|KIF5B|ENSG00000170759.10|kinesin family member 5B
hg19_v2_chr14_+_74551650_74551680	0.054852	NKX3-1	ENST00000554938.1|LIN52|ENSG00000205659.6|lin-52 homolog (C. elegans)
hg19_v2_chr14_-_36536396_36536433	0.0542687	NKX3-1	ENST00000546376.1|RP11-116N8.4|ENSG00000257826.1|RP11-116N8.4
hg19_v2_chr2_+_64069459_64069579	0.0542074	NKX3-1	ENST00000445915.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2 	ENST00000475462.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr7_+_107301447_107301451	0.0541895	NKX3-1	ENST00000440056.1|SLC26A4|ENSG00000091137.7|solute carrier family 26 (anion exchanger), member 4
hg19_v2_chr6_-_135271219_135271257	0.0538154	NKX3-1	ENST00000367847.2|ALDH8A1|ENSG00000118514.9|aldehyde dehydrogenase 8 family, member A1 	ENST00000367845.2|ALDH8A1|ENSG00000118514.9|aldehyde dehydrogenase 8 family, member A1
hg19_v2_chr1_-_203274387_203274417	0.0537829	NKX3-1	ENST00000432511.1|RP11-134P9.1|ENSG00000233791.1|long intergenic non-protein coding RNA 1136
hg19_v2_chr12_-_89920030_89920039	0.05376	NKX3-1	ENST00000413530.1|GALNT4|ENSG00000257594.2|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4) 	ENST00000547474.1|POC1B-GALNT4|ENSG00000259075.2|POC1B-GALNT4 readthrough
hg19_v2_chr2_-_102003987_102004057	0.0522986	NKX3-1	ENST00000324768.5|CREG2|ENSG00000175874.5|cellular repressor of E1A-stimulated genes 2
hg19_v2_chr6_-_160210692_160210705	0.0522967	NKX3-1	ENST00000538128.1|TCP1|ENSG00000120438.7|t-complex 1 	ENST00000537390.1|TCP1|ENSG00000120438.7|t-complex 1
hg19_v2_chrX_-_107681633_107681692	0.0512056	NKX3-1	ENST00000394872.2|COL4A6|ENSG00000197565.11|collagen, type IV, alpha 6 	ENST00000334504.7|COL4A6|ENSG00000197565.11|collagen, type IV, alpha 6
hg19_v2_chr11_-_76367756_76367794	0.0507124	NKX3-1	ENST00000531511.1|RP11-672A2.4|ENSG00000254810.1|RP11-672A2.4
hg19_v2_chr5_-_1799932_1799960	0.0468352	NKX3-1	ENST00000382647.7|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36 	ENST00000505059.2|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36
hg19_v2_chr1_-_48866517_48866534	0.046547	NKX3-1	ENST00000371841.1|SPATA6|ENSG00000132122.7|spermatogenesis associated 6
hg19_v2_chr1_-_22109484_22109528	0.0462287	NKX3-1	ENST00000529637.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr12_-_53045948_53045996	0.0451315	NKX3-1	ENST00000309680.3|KRT2|ENSG00000172867.3|keratin 2
hg19_v2_chr14_+_86401039_86401083	0.0448374	NKX3-1	ENST00000557195.1|CTD-2341M24.1|ENSG00000258733.1|CTD-2341M24.1
hg19_v2_chr12_+_113229337_113229348	0.0444302	NKX3-1	ENST00000552667.1|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse)
hg19_v2_chr14_-_54420133_54420173	0.0438888	NKX3-1	ENST00000559501.1|BMP4|ENSG00000125378.11|bone morphogenetic protein 4 	ENST00000558984.1|BMP4|ENSG00000125378.11|bone morphogenetic protein 4
hg19_v2_chr17_-_29624343_29624429	0.0435885	NKX3-1	ENST00000247271.4|OMG|ENSG00000126861.4|oligodendrocyte myelin glycoprotein
hg19_v2_chr11_-_33913708_33913836	0.0435674	NKX3-1	ENST00000257818.2|LMO2|ENSG00000135363.7|LIM domain only 2 (rhombotin-like 1)
hg19_v2_chr6_+_143999072_143999170	0.043473	NKX3-1	ENST00000440869.2|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2 	ENST00000367582.3|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2 	ENST00000451827.2|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2
hg19_v2_chr17_-_34257731_34257766	0.0432175	NKX3-1	ENST00000431884.2|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000425909.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000394528.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000430160.2|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chr18_+_29769978_29769989	0.042893	NKX3-1	ENST00000269202.6|MEP1B|ENSG00000141434.7|meprin A, beta 	ENST00000581447.1|MEP1B|ENSG00000141434.7|meprin A, beta
hg19_v2_chr20_+_2795609_2795620	0.0427613	NKX3-1	ENST00000554164.1|TMEM239|ENSG00000198326.8|transmembrane protein 239 	ENST00000380593.4|TMEM239|ENSG00000241690.3|CDNA FLJ26142 fis, clone TST04526; Transmembrane protein 239; Uncharacterized protein
hg19_v2_chr6_-_135271260_135271272	0.0421356	NKX3-1	ENST00000265605.2|ALDH8A1|ENSG00000118514.9|aldehyde dehydrogenase 8 family, member A1
hg19_v2_chr14_-_107035208_107035226	0.0420411	NKX3-1	ENST00000390626.2|IGHV5-51|ENSG00000211966.2|immunoglobulin heavy variable 5-51
hg19_v2_chr14_+_91709103_91709103	0.0412678	NKX3-1	ENST00000553725.1|CTD-2547L24.3|ENSG00000258875.1|HCG1816139; Uncharacterized protein
hg19_v2_chr16_+_28985542_28985642	0.0412239	NKX3-1	ENST00000567771.1|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila) 	ENST00000568388.1|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila)
hg19_v2_chr14_-_39417410_39417466	0.0403013	NKX3-1	ENST00000557019.1|LINC00639|ENSG00000259070.1|long intergenic non-protein coding RNA 639 	ENST00000556116.1|LINC00639|ENSG00000259070.1|long intergenic non-protein coding RNA 639 	ENST00000554732.1|LINC00639|ENSG00000259070.1|long intergenic non-protein coding RNA 639
hg19_v2_chr7_+_7222233_7222327	0.0386782	NKX3-1	ENST00000436587.2|C1GALT1|ENSG00000106392.6|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
hg19_v2_chr20_+_2821340_2821365	0.0381289	NKX3-1	ENST00000380445.3|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae) 	ENST00000380469.3|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg19_v2_chr12_+_113416340_113416363	0.0381211	NKX3-1	ENST00000552756.1|OAS2|ENSG00000111335.8|2'-5'-oligoadenylate synthetase 2, 69/71kDa
hg19_v2_chr2_-_55496476_55496486	0.0379215	NKX3-1	ENST00000441307.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2
hg19_v2_chr9_+_134065506_134065509	0.0376439	NKX3-1	ENST00000483497.2|NUP214|ENSG00000126883.12|nucleoporin 214kDa
hg19_v2_chr7_+_141463897_141463897	0.0376168	NKX3-1	ENST00000247879.2|TAS2R3|ENSG00000127362.2|taste receptor, type 2, member 3
hg19_v2_chr1_-_110155671_110155685	0.0375504	NKX3-1	ENST00000351050.3|GNAT2|ENSG00000134183.7|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2
hg19_v2_chr3_+_156799587_156799630	0.0373513	NKX3-1	ENST00000469196.1|RP11-6F2.5|ENSG00000241544.1|RP11-6F2.5
hg19_v2_chr4_+_159131596_159131623	0.0372366	NKX3-1	ENST00000512481.1|TMEM144|ENSG00000164124.6|transmembrane protein 144
hg19_v2_chr1_-_216596738_216596796	0.0369482	NKX3-1	ENST00000307340.3|USH2A|ENSG00000042781.8|Usher syndrome 2A (autosomal recessive, mild) 	ENST00000366943.2|USH2A|ENSG00000042781.8|Usher syndrome 2A (autosomal recessive, mild) 	ENST00000366942.3|USH2A|ENSG00000042781.8|Usher syndrome 2A (autosomal recessive, mild)
hg19_v2_chr12_-_89919765_89919849	0.0362603	NKX3-1	ENST00000541909.1|POC1B|ENSG00000139323.9|POC1 centriolar protein B 	ENST00000313546.3|POC1B|ENSG00000139323.9|POC1 centriolar protein B
hg19_v2_chr7_-_7680601_7680632	0.0356559	NKX3-1	ENST00000396682.2|RPA3|ENSG00000106399.7|replication protein A3, 14kDa
hg19_v2_chr17_+_41150290_41150470	0.0354714	NKX3-1	ENST00000589037.1|RPL27|ENSG00000131469.8|ribosomal protein L27 	ENST00000253788.5|RPL27|ENSG00000131469.8|ribosomal protein L27
hg19_v2_chr1_+_59250815_59250848	0.0353631	NKX3-1	ENST00000544621.1|RP4-794H19.2|ENSG00000234807.4|long intergenic non-protein coding RNA 1135 	ENST00000419531.2|RP4-794H19.2|ENSG00000234807.4|long intergenic non-protein coding RNA 1135
hg19_v2_chr15_+_44084040_44084155	0.0350379	NKX3-1	ENST00000249786.4|SERF2|ENSG00000140264.15|small EDRK-rich factor 2
hg19_v2_chr1_-_154832316_154832336	0.0343158	NKX3-1	ENST00000361147.4|KCNN3|ENSG00000143603.14|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v2_chr17_+_33914424_33914455	0.0336484	NKX3-1	ENST00000590432.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit
hg19_v2_chr3_+_160117418_160117463	0.0335172	NKX3-1	ENST00000465903.1|SMC4|ENSG00000113810.11|structural maintenance of chromosomes 4 	ENST00000485645.1|SMC4|ENSG00000113810.11|structural maintenance of chromosomes 4 	ENST00000360111.2|SMC4|ENSG00000113810.11|structural maintenance of chromosomes 4 	ENST00000472991.1|SMC4|ENSG00000113810.11|structural maintenance of chromosomes 4 	ENST00000467468.1|SMC4|ENSG00000113810.11|structural maintenance of chromosomes 4 	ENST00000469762.1|SMC4|ENSG00000113810.11|structural maintenance of chromosomes 4 	ENST00000489573.1|SMC4|ENSG00000113810.11|structural maintenance of chromosomes 4 	ENST00000462787.1|SMC4|ENSG00000113810.11|structural maintenance of chromosomes 4 	ENST00000490207.1|SMC4|ENSG00000113810.11|structural maintenance of chromosomes 4 	ENST00000485867.1|SMC4|ENSG00000113810.11|structural maintenance of chromosomes 4
hg19_v2_chr10_+_91461413_91461436	0.0328395	NKX3-1	ENST00000447580.1|KIF20B|ENSG00000138182.10|kinesin family member 20B
hg19_v2_chr3_-_121379739_121379771	0.0325051	NKX3-1	ENST00000428394.2|HCLS1|ENSG00000180353.6|hematopoietic cell-specific Lyn substrate 1 	ENST00000314583.3|HCLS1|ENSG00000180353.6|hematopoietic cell-specific Lyn substrate 1
hg19_v2_chr20_-_50722183_50722217	0.0324464	NKX3-1	ENST00000371523.4|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein
hg19_v2_chr3_+_100428268_100428287	0.0319703	NKX3-1	ENST00000240851.4|TFG|ENSG00000114354.8|TRK-fused gene
hg19_v2_chr1_-_22109682_22109719	0.0319615	NKX3-1	ENST00000400301.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48 	ENST00000532737.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr5_-_9903938_9903991	0.0318264	NKX3-1	ENST00000511616.1|CTD-2143L24.1|ENSG00000249781.2|CTD-2143L24.1
hg19_v2_chr9_+_134065519_134065535	0.031399	NKX3-1	ENST00000531600.1|NUP214|ENSG00000126883.12|nucleoporin 214kDa
hg19_v2_chr1_+_161475208_161475226	0.0310453	NKX3-1	ENST00000367972.4|FCGR2A|ENSG00000143226.9|Fc fragment of IgG, low affinity IIa, receptor (CD32) 	ENST00000271450.6|FCGR2A|ENSG00000143226.9|Fc fragment of IgG, low affinity IIa, receptor (CD32)
hg19_v2_chr17_+_48610042_48610069	0.0308388	NKX3-1	ENST00000503246.1|EPN3|ENSG00000049283.13|epsin 3
hg19_v2_chr15_+_44084503_44084575	0.0308269	NKX3-1	ENST00000409960.2|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000409646.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000594896.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000339624.5|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000409291.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000402131.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000403425.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000430901.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2
hg19_v2_chr4_+_76481258_76481289	0.0304065	NKX3-1	ENST00000311623.4|C4orf26|ENSG00000174792.6|chromosome 4 open reading frame 26 	ENST00000435974.2|C4orf26|ENSG00000174792.6|chromosome 4 open reading frame 26
hg19_v2_chrX_-_38186775_38186802	0.0297688	NKX3-1	ENST00000339363.3|RPGR|ENSG00000156313.8|retinitis pigmentosa GTPase regulator 	ENST00000309513.3|RPGR|ENSG00000156313.8|retinitis pigmentosa GTPase regulator 	ENST00000338898.3|RPGR|ENSG00000156313.8|retinitis pigmentosa GTPase regulator 	ENST00000342811.3|RPGR|ENSG00000156313.8|retinitis pigmentosa GTPase regulator 	ENST00000378505.2|RPGR|ENSG00000156313.8|retinitis pigmentosa GTPase regulator
hg19_v2_chr19_-_15544099_15544156	0.0294958	NKX3-1	ENST00000599910.2|WIZ|ENSG00000011451.13|widely interspaced zinc finger motifs
hg19_v2_chr19_+_16308659_16308670	0.0285249	NKX3-1	ENST00000590263.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit 	ENST00000590756.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit 	ENST00000541844.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit
hg19_v2_chr11_+_7506713_7506773	0.0285208	NKX3-1	ENST00000329293.3|OLFML1|ENSG00000183801.3|olfactomedin-like 1 	ENST00000534244.1|OLFML1|ENSG00000183801.3|olfactomedin-like 1
hg19_v2_chr14_-_65409438_65409479	0.0282113	NKX3-1	ENST00000557049.1|GPX2|ENSG00000176153.10|glutathione peroxidase 2 (gastrointestinal)
hg19_v2_chr19_-_14889349_14889381	0.0277692	NKX3-1	ENST00000315576.3|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000392967.2|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000346057.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000353876.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000353005.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2
hg19_v2_chr18_-_3845321_3845371	0.0277492	NKX3-1	ENST00000539435.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1 	ENST00000400147.2|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr14_-_39417473_39417480	0.0276582	NKX3-1	ENST00000553932.1|LINC00639|ENSG00000259070.1|long intergenic non-protein coding RNA 639
hg19_v2_chr7_-_6066183_6066222	0.0266975	NKX3-1	ENST00000422786.1|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1
hg19_v2_chr3_+_93698974_93699039	0.0262917	NKX3-1	ENST00000535334.1|ARL13B|ENSG00000169379.11|ADP-ribosylation factor-like 13B 	ENST00000478400.1|ARL13B|ENSG00000169379.11|ADP-ribosylation factor-like 13B 	ENST00000303097.7|ARL13B|ENSG00000169379.11|ADP-ribosylation factor-like 13B 	ENST00000394222.3|ARL13B|ENSG00000169379.11|ADP-ribosylation factor-like 13B 	ENST00000471138.1|ARL13B|ENSG00000169379.11|ADP-ribosylation factor-like 13B 	ENST00000539730.1|ARL13B|ENSG00000169379.11|ADP-ribosylation factor-like 13B
hg19_v2_chr4_+_56719782_56719963	0.025657	NKX3-1	ENST00000381295.2|EXOC1|ENSG00000090989.13|exocyst complex component 1 	ENST00000346134.7|EXOC1|ENSG00000090989.13|exocyst complex component 1 	ENST00000349598.6|EXOC1|ENSG00000090989.13|exocyst complex component 1
hg19_v2_chr6_+_26124373_26124431	0.0254062	NKX3-1	ENST00000377791.2|HIST1H2AC|ENSG00000180573.8|histone cluster 1, H2ac 	ENST00000602637.1|HIST1H2AC|ENSG00000180573.8|histone cluster 1, H2ac
hg19_v2_chr10_-_27529486_27529497	0.025221	NKX3-1	ENST00000375888.1|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5
hg19_v2_chr17_+_68100989_68101026	0.0251257	NKX3-1	ENST00000585558.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392670.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr5_-_176889381_176889432	0.0245926	NKX3-1	ENST00000393563.4|DBN1|ENSG00000113758.9|drebrin 1 	ENST00000512501.1|DBN1|ENSG00000113758.9|drebrin 1
hg19_v2_chr10_+_32735030_32735110	0.0244056	NKX3-1	ENST00000277657.6|CCDC7|ENSG00000216937.7|coiled-coil domain containing 7 	ENST00000362006.5|CCDC7|ENSG00000216937.7|coiled-coil domain containing 7
hg19_v2_chr3_+_52489503_52489540	0.0242532	NKX3-1	ENST00000345716.4|NISCH|ENSG00000010322.11|nischarin
hg19_v2_chr19_-_44174305_44174329	0.0240514	NKX3-1	ENST00000601723.1|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor 	ENST00000339082.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr4_-_4228616_4228616	0.0239541	NKX3-1	ENST00000296358.4|OTOP1|ENSG00000163982.5|otopetrin 1
hg19_v2_chr11_+_47293795_47293821	0.0237799	NKX3-1	ENST00000422579.1|MADD|ENSG00000110514.14|MAP-kinase activating death domain
hg19_v2_chrX_+_13671225_13671327	0.0235276	NKX3-1	ENST00000545566.1|TCEANC|ENSG00000176896.7|transcription elongation factor A (SII) N-terminal and central domain containing 	ENST00000544987.1|TCEANC|ENSG00000176896.7|transcription elongation factor A (SII) N-terminal and central domain containing 	ENST00000314720.4|TCEANC|ENSG00000176896.7|transcription elongation factor A (SII) N-terminal and central domain containing
hg19_v2_chr21_-_27107198_27107227	0.0234686	NKX3-1	ENST00000400094.1|ATP5J|ENSG00000154723.8|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
hg19_v2_chr1_-_160232291_160232304	0.0233096	NKX3-1	ENST00000368074.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000447377.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr15_-_50558223_50558263	0.023286	NKX3-1	ENST00000267845.3|HDC|ENSG00000140287.6|histidine decarboxylase
hg19_v2_chr18_-_67629015_67629039	0.0229844	NKX3-1	ENST00000579496.1|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr7_+_135242652_135242689	0.0227447	NKX3-1	ENST00000285968.6|NUP205|ENSG00000155561.10|nucleoporin 205kDa 	ENST00000440390.2|NUP205|ENSG00000155561.10|nucleoporin 205kDa
hg19_v2_chr8_+_27168988_27169021	0.0226439	NKX3-1	ENST00000397501.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000338238.4|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000544172.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr1_-_6445809_6445885	0.0218963	NKX3-1	ENST00000377855.2|ACOT7|ENSG00000097021.15|acyl-CoA thioesterase 7
hg19_v2_chr6_+_43266063_43266097	0.0215359	NKX3-1	ENST00000372574.3|SLC22A7|ENSG00000137204.10|solute carrier family 22 (organic anion transporter), member 7
hg19_v2_chr16_+_69373323_69373371	0.0211725	NKX3-1	ENST00000254940.5|NIP7|ENSG00000132603.9|NIP7, nucleolar pre-rRNA processing protein
hg19_v2_chr13_+_24883703_24883718	0.0210392	NKX3-1	ENST00000332018.4|C1QTNF9|ENSG00000240654.2|C1q and tumor necrosis factor related protein 9
hg19_v2_chr16_+_55689991_55690000	0.0203764	NKX3-1	ENST00000568529.2|SLC6A2|ENSG00000103546.14|solute carrier family 6 (neurotransmitter transporter), member 2
hg19_v2_chr14_-_65409502_65409531	0.0197237	NKX3-1	ENST00000389614.5|GPX2|ENSG00000176153.10|glutathione peroxidase 2 (gastrointestinal)
hg19_v2_chr3_+_119013185_119013306	0.0189358	NKX3-1	ENST00000264245.4|ARHGAP31|ENSG00000031081.6|Rho GTPase activating protein 31
hg19_v2_chr3_+_100428316_100428471	0.0188199	NKX3-1	ENST00000479672.1|TFG|ENSG00000114354.8|TRK-fused gene 	ENST00000476228.1|TFG|ENSG00000114354.8|TRK-fused gene 	ENST00000463568.1|TFG|ENSG00000114354.8|TRK-fused gene
hg19_v2_chr20_-_34330129_34330234	0.0183543	NKX3-1	ENST00000397370.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000528062.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000407261.4|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000374038.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000361162.6|RBM39|ENSG00000131051.16|RNA binding motif protein 39
hg19_v2_chr14_-_47812321_47812438	0.0181718	NKX3-1	ENST00000357362.3|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2 	ENST00000486952.2|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2 	ENST00000426342.1|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2
hg19_v2_chr1_-_173793458_173793479	0.0178387	NKX3-1	ENST00000356198.2|CENPL|ENSG00000120334.11|centromere protein L
hg19_v2_chr1_+_22962948_22962999	0.0177249	NKX3-1	ENST00000374642.3|C1QA|ENSG00000173372.12|complement component 1, q subcomponent, A chain
hg19_v2_chr7_+_16700806_16700897	0.0170022	NKX3-1	ENST00000446596.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000438834.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2
hg19_v2_chr12_-_75603482_75603534	0.0167885	NKX3-1	ENST00000341669.3|KCNC2|ENSG00000166006.8|potassium voltage-gated channel, Shaw-related subfamily, member 2 	ENST00000298972.1|KCNC2|ENSG00000166006.8|potassium voltage-gated channel, Shaw-related subfamily, member 2 	ENST00000350228.2|KCNC2|ENSG00000166006.8|potassium voltage-gated channel, Shaw-related subfamily, member 2
hg19_v2_chr7_-_5998714_5998714	0.0166776	NKX3-1	ENST00000539903.1|RSPH10B|ENSG00000155026.12|radial spoke head 10 homolog B (Chlamydomonas)
hg19_v2_chr12_+_4829507_4829601	0.0161334	NKX3-1	ENST00000252318.2|GALNT8|ENSG00000130035.2|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)
hg19_v2_chr8_-_49834299_49834446	0.0160043	NKX3-1	ENST00000396822.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr3_-_18480260_18480269	0.0157978	NKX3-1	ENST00000454909.2|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr6_-_33285505_33285529	0.0156736	NKX3-1	ENST00000431845.2|ZBTB22|ENSG00000236104.2|zinc finger and BTB domain containing 22
hg19_v2_chr5_+_74907284_74907284	0.0156042	NKX3-1	ENST00000601380.2|ANKDD1B|ENSG00000189045.9|ankyrin repeat and death domain containing 1B
hg19_v2_chr8_-_49833978_49833996	0.0151544	NKX3-1	ENST00000020945.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr14_+_101293687_101293748	0.0149896	NKX3-1	ENST00000455286.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding)
hg19_v2_chr15_-_79576229_79576296	0.0146558	NKX3-1	ENST00000557790.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000558297.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4
hg19_v2_chr8_+_30300119_30300137	0.0142667	NKX3-1	ENST00000520191.1|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing
hg19_v2_chr6_+_24775641_24775710	0.014038	NKX3-1	ENST00000378054.2|GMNN|ENSG00000112312.5|geminin, DNA replication inhibitor 	ENST00000476555.1|GMNN|ENSG00000112312.5|geminin, DNA replication inhibitor
hg19_v2_chr8_-_30706608_30706608	0.0138033	NKX3-1	ENST00000256246.2|TEX15|ENSG00000133863.2|testis expressed 15
hg19_v2_chr11_+_101983176_101983245	0.0136825	NKX3-1	ENST00000524575.1|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr6_-_22297730_22297730	0.0135566	NKX3-1	ENST00000306482.1|PRL|ENSG00000172179.7|prolactin
hg19_v2_chr5_+_178977546_178977571	0.0134255	NKX3-1	ENST00000319449.4|RUFY1|ENSG00000176783.10|RUN and FYVE domain containing 1 	ENST00000377001.2|RUFY1|ENSG00000176783.10|RUN and FYVE domain containing 1
hg19_v2_chr17_-_29641084_29641103	0.013072	NKX3-1	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr2_+_173686303_173686325	0.0127308	NKX3-1	ENST00000397087.3|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr7_+_107301065_107301080	0.0126484	NKX3-1	ENST00000265715.3|SLC26A4|ENSG00000091137.7|solute carrier family 26 (anion exchanger), member 4
hg19_v2_chr9_-_111882195_111882255	0.0124681	NKX3-1	ENST00000374586.3|TMEM245|ENSG00000106771.8|transmembrane protein 245
hg19_v2_chr1_+_171217677_171217703	0.0124227	NKX3-1	ENST00000402921.2|FMO1|ENSG00000010932.11|flavin containing monooxygenase 1
hg19_v2_chr19_-_37341160_37341215	0.0123808	NKX3-1	ENST00000528994.1|ZNF790|ENSG00000197863.4|zinc finger protein 790
hg19_v2_chr11_+_114168085_114168222	0.0120702	NKX3-1	ENST00000541754.1|NNMT|ENSG00000166741.3|nicotinamide N-methyltransferase
hg19_v2_chr5_+_96038554_96038572	0.011967	NKX3-1	ENST00000508197.1|CAST|ENSG00000153113.19|calpastatin
hg19_v2_chr14_-_59951112_59951148	0.0118819	NKX3-1	ENST00000247194.4|L3HYPDH|ENSG00000126790.7|L-3-hydroxyproline dehydratase (trans-)
hg19_v2_chr5_-_138211051_138211072	0.0118294	NKX3-1	ENST00000518785.1|LRRTM2|ENSG00000146006.7|leucine rich repeat transmembrane neuronal 2
hg19_v2_chr3_-_160116995_160117020	0.0115855	NKX3-1	ENST00000465537.1|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas) 	ENST00000486856.1|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas) 	ENST00000468218.1|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas) 	ENST00000478370.1|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas)
hg19_v2_chr12_+_6602517_6602559	0.0112499	NKX3-1	ENST00000315579.5|NCAPD2|ENSG00000010292.8|non-SMC condensin I complex, subunit D2 	ENST00000539714.1|NCAPD2|ENSG00000010292.8|non-SMC condensin I complex, subunit D2
hg19_v2_chr17_+_41150479_41150500	0.0111434	NKX3-1	ENST00000589913.1|RPL27|ENSG00000131469.8|ribosomal protein L27
hg19_v2_chr16_+_55690002_55690023	0.0111076	NKX3-1	ENST00000414754.3|SLC6A2|ENSG00000103546.14|solute carrier family 6 (neurotransmitter transporter), member 2
hg19_v2_chr7_+_5938351_5938379	0.0110084	NKX3-1	ENST00000325974.6|CCZ1|ENSG00000122674.8|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
hg19_v2_chr17_-_29641104_29641130	0.0109505	NKX3-1	ENST00000577894.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B 	ENST00000330927.4|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr4_+_159131346_159131401	0.0107535	NKX3-1	ENST00000508243.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000296529.6|TMEM144|ENSG00000164124.6|transmembrane protein 144
hg19_v2_chr7_-_91875109_91875260	0.010543	NKX3-1	ENST00000412043.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000430102.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000425073.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394503.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000454017.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000440209.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000413688.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000452773.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000433016.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394505.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000422347.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000458493.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000425919.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing
hg19_v2_chr6_-_160210715_160210781	0.0103117	NKX3-1	ENST00000392168.2|TCP1|ENSG00000120438.7|t-complex 1 	ENST00000321394.7|TCP1|ENSG00000120438.7|t-complex 1
hg19_v2_chrX_+_85403487_85403625	0.00969406	NKX3-1	ENST00000373125.4|DACH2|ENSG00000126733.16|dachshund homolog 2 (Drosophila)
hg19_v2_chr4_-_141677267_141677291	0.00933681	NKX3-1	ENST00000442267.2|TBC1D9|ENSG00000109436.7|TBC1 domain family, member 9 (with GRAM domain)
hg19_v2_chr12_+_96883347_96883400	0.00924337	NKX3-1	ENST00000524981.4|C12orf55|ENSG00000188596.5|chromosome 12 open reading frame 55 	ENST00000298953.3|C12orf55|ENSG00000188596.5|chromosome 12 open reading frame 55
hg19_v2_chr14_+_31091511_31091547	0.00880372	NKX3-1	ENST00000544052.2|SCFD1|ENSG00000092108.16|sec1 family domain containing 1 	ENST00000421551.3|SCFD1|ENSG00000092108.16|sec1 family domain containing 1 	ENST00000541123.1|SCFD1|ENSG00000092108.16|sec1 family domain containing 1 	ENST00000557076.1|SCFD1|ENSG00000092108.16|sec1 family domain containing 1 	ENST00000553693.1|SCFD1|ENSG00000092108.16|sec1 family domain containing 1 	ENST00000396629.2|SCFD1|ENSG00000092108.16|sec1 family domain containing 1
hg19_v2_chr4_-_122791583_122791657	0.00878819	NKX3-1	ENST00000506636.1|BBS7|ENSG00000138686.5|Bardet-Biedl syndrome 7 	ENST00000264499.4|BBS7|ENSG00000138686.5|Bardet-Biedl syndrome 7
hg19_v2_chr1_-_208417620_208417680	0.00875856	NKX3-1	ENST00000367033.3|PLXNA2|ENSG00000076356.6|plexin A2
hg19_v2_chr7_+_77325738_77325789	0.0086246	NKX3-1	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chr12_-_89919965_89919978	0.00846448	NKX3-1	ENST00000548729.1|POC1B-GALNT4|ENSG00000259075.2|POC1B-GALNT4 readthrough
hg19_v2_chr15_+_31196080_31196136	0.00802007	NKX3-1	ENST00000561607.1|FAN1|ENSG00000198690.5|FANCD2/FANCI-associated nuclease 1 	ENST00000565466.1|FAN1|ENSG00000198690.5|FANCD2/FANCI-associated nuclease 1
hg19_v2_chr1_-_152779104_152779133	0.007773	NKX3-1	ENST00000606576.1|LCE1C|ENSG00000197084.4|late cornified envelope 1C 	ENST00000368768.1|LCE1C|ENSG00000197084.4|late cornified envelope 1C
hg19_v2_chr17_-_37009882_37010096	0.00773997	NKX3-1	ENST00000378096.3|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000394332.1|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000394333.1|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000577407.1|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000479035.2|RPL23|ENSG00000125691.8|ribosomal protein L23
hg19_v2_chr17_-_7307358_7307456	0.00738278	NKX3-1	ENST00000576017.1|TMEM256|ENSG00000205544.3|transmembrane protein 256 	ENST00000535512.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000302422.3|TMEM256|ENSG00000205544.3|transmembrane protein 256
hg19_v2_chr22_+_44577237_44577278	0.00719211	NKX3-1	ENST00000415224.1|PARVG|ENSG00000138964.12|parvin, gamma 	ENST00000417767.1|PARVG|ENSG00000138964.12|parvin, gamma
hg19_v2_chr5_-_160279207_160279247	0.00662486	NKX3-1	ENST00000327245.5|ATP10B|ENSG00000118322.8|ATPase, class V, type 10B
hg19_v2_chr4_+_15376165_15376178	0.00658138	NKX3-1	ENST00000382383.3|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7 	ENST00000429690.1|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7
hg19_v2_chr15_+_57540230_57540239	0.00627957	NKX3-1	ENST00000559703.1|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr4_+_2451700_2451700	0.00571786	NKX3-1	ENST00000506607.1|RP11-503N18.3|ENSG00000249428.1|Uncharacterized protein
hg19_v2_chr2_+_98703595_98703635	0.00559116	NKX3-1	ENST00000435344.1|VWA3B|ENSG00000168658.14|von Willebrand factor A domain containing 3B
hg19_v2_chr9_+_706842_706889	0.00540313	NKX3-1	ENST00000382293.3|KANK1|ENSG00000107104.14|KN motif and ankyrin repeat domains 1
hg19_v2_chr3_-_150966902_150966933	0.0052907	NKX3-1	ENST00000424796.2|P2RY14|ENSG00000174944.4|purinergic receptor P2Y, G-protein coupled, 14
hg19_v2_chr18_-_3845293_3845318	0.00527449	NKX3-1	ENST00000400145.2|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr3_+_98482175_98482197	0.0046582	NKX3-1	ENST00000485391.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6 	ENST00000492254.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr19_+_17970677_17970686	0.0040495	NKX3-1	ENST00000222247.5|RPL18A|ENSG00000105640.8|ribosomal protein L18a
hg19_v2_chr17_+_67498295_67498333	0.00361374	NKX3-1	ENST00000589295.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr2_+_64069240_64069332	0.00354635	NKX3-1	ENST00000497883.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr3_+_100354442_100354464	0.00350877	NKX3-1	ENST00000475887.1|GPR128|ENSG00000144820.3|G protein-coupled receptor 128
hg19_v2_chr12_+_111051902_111051975	0.00344967	NKX3-1	ENST00000397655.3|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000471804.2|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000377654.3|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000397659.4|TCTN1|ENSG00000204852.11|tectonic family member 1
hg19_v2_chr3_-_178976996_178976996	0.00277628	NKX3-1	ENST00000485523.1|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v2_chr11_-_26588634_26588775	0.00274138	NKX3-1	ENST00000436318.2|MUC15|ENSG00000169550.8|mucin 15, cell surface associated 	ENST00000281268.8|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr20_-_271304_271422	0.00270932	NKX3-1	ENST00000400269.3|C20orf96|ENSG00000196476.7|chromosome 20 open reading frame 96 	ENST00000360321.2|C20orf96|ENSG00000196476.7|chromosome 20 open reading frame 96
hg19_v2_chr1_+_46972668_46972669	0.00235202	NKX3-1	ENST00000371956.4|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1 	ENST00000360032.3|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1
hg19_v2_chr2_-_207082624_207082640	0.00188389	NKX3-1	ENST00000458440.1|GPR1|ENSG00000183671.8|G protein-coupled receptor 1 	ENST00000437420.1|GPR1|ENSG00000183671.8|G protein-coupled receptor 1
hg19_v2_chrX_-_31284974_31284993	0.00180301	NKX3-1	ENST00000378702.4|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr2_-_55496174_55496334	0.00157966	NKX3-1	ENST00000417363.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000412530.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000394600.3|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000366137.2|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000420637.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2
hg19_v2_chrX_+_151081351_151081390	0.00142608	NKX3-1	ENST00000276344.2|MAGEA4|ENSG00000147381.7|melanoma antigen family A, 4
hg19_v2_chr12_-_125398654_125398687	0.00140889	NKX3-1	ENST00000541645.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000540351.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr5_-_76788024_76788112	0.00137581	NKX3-1	ENST00000515253.1|WDR41|ENSG00000164253.8|WD repeat domain 41 	ENST00000414719.2|WDR41|ENSG00000164253.8|WD repeat domain 41 	ENST00000507654.1|WDR41|ENSG00000164253.8|WD repeat domain 41 	ENST00000514559.1|WDR41|ENSG00000164253.8|WD repeat domain 41 	ENST00000511791.1|WDR41|ENSG00000164253.8|WD repeat domain 41
hg19_v2_chr12_-_125398602_125398625	0.00134377	NKX3-1	ENST00000541272.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000535131.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chrX_-_31285018_31285028	0.000946184	NKX3-1	ENST00000361471.4|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr16_+_57406437_57406465	0.000822794	NKX3-1	ENST00000564948.1|CX3CL1|ENSG00000006210.6|chemokine (C-X3-C motif) ligand 1
hg19_v2_chr4_-_1685718_1686029	0.000499189	NKX3-1	ENST00000472884.2|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A 	ENST00000489363.1|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A 	ENST00000308132.6|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A 	ENST00000463238.1|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A
hg19_v2_chr12_-_92536433_92536459	0.000468438	NKX3-1	ENST00000551563.2|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000546975.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000549802.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79
hg19_v2_chr22_-_36761081_36761157	0.000224413	NKX3-1	ENST00000456729.1|MYH9|ENSG00000100345.16|myosin, heavy chain 9, non-muscle 	ENST00000401701.1|MYH9|ENSG00000100345.16|myosin, heavy chain 9, non-muscle
hg19_v2_chr15_-_31393910_31393936	0.000153979	NKX3-1	ENST00000397795.2|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1 	ENST00000256552.6|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1 	ENST00000559179.1|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1
