hg19_v2_chr7_-_65113280_65113280	0.4653	LHX2	ENST00000593865.1|AC104057.1|ENSG00000269558.1|Protein LOC100996407
hg19_v2_chr6_-_26199499_26199528	0.446822	LHX2	ENST00000377831.5|HIST1H3D|ENSG00000197409.6|histone cluster 1, H3d
hg19_v2_chr4_+_70894130_70894188	0.306292	LHX2	ENST00000526767.1|HTN3|ENSG00000205649.3|histatin 3 	ENST00000530128.1|HTN3|ENSG00000205649.3|histatin 3 	ENST00000381057.3|HTN3|ENSG00000205649.3|histatin 3
hg19_v2_chr14_+_67708344_67708400	0.286253	LHX2	ENST00000557237.1|MPP5|ENSG00000072415.4|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
hg19_v2_chr19_+_42212526_42212576	0.271886	LHX2	ENST00000598976.1|CEA|ENSG00000267881.1|Uncharacterized protein  	ENST00000221992.6|CEACAM5|ENSG00000105388.10|carcinoembryonic antigen-related cell adhesion molecule 5 	ENST00000405816.1|CEACAM5|ENSG00000105388.10|carcinoembryonic antigen-related cell adhesion molecule 5 	ENST00000435837.2|CEA|ENSG00000267881.1|Uncharacterized protein
hg19_v2_chr10_+_4828815_4828822	0.253565	LHX2	ENST00000533295.1|AKR1E2|ENSG00000165568.13|aldo-keto reductase family 1, member E2
hg19_v2_chr14_-_38036271_38036301	0.249217	LHX2	ENST00000556024.1|RP11-356O9.2|ENSG00000259087.1|RP11-356O9.2
hg19_v2_chr14_-_51027838_51027851	0.235116	LHX2	ENST00000555216.1|MAP4K5|ENSG00000012983.7|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v2_chr1_+_244515930_244515950	0.232471	LHX2	ENST00000366537.1|C1orf100|ENSG00000173728.6|chromosome 1 open reading frame 100 	ENST00000308105.4|C1orf100|ENSG00000173728.6|chromosome 1 open reading frame 100
hg19_v2_chr12_-_118796910_118796943	0.224977	LHX2	ENST00000541186.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000539872.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr3_-_145940214_145940228	0.222796	LHX2	ENST00000481701.1|PLSCR4|ENSG00000114698.10|phospholipid scramblase 4
hg19_v2_chr13_+_78315466_78315519	0.214729	LHX2	ENST00000314070.5|SLAIN1|ENSG00000139737.17|SLAIN motif family, member 1 	ENST00000462234.1|SLAIN1|ENSG00000139737.17|SLAIN motif family, member 1
hg19_v2_chr2_-_231084659_231084721	0.208437	LHX2	ENST00000258381.6|SP110|ENSG00000135899.12|SP110 nuclear body protein 	ENST00000358662.4|SP110|ENSG00000135899.12|SP110 nuclear body protein 	ENST00000455674.1|SP110|ENSG00000135899.12|SP110 nuclear body protein 	ENST00000392048.3|SP110|ENSG00000135899.12|SP110 nuclear body protein
hg19_v2_chr9_-_100854838_100854851	0.199949	LHX2	ENST00000538344.1|TRIM14|ENSG00000106785.10|tripartite motif containing 14
hg19_v2_chr6_-_26027480_26027522	0.188143	LHX2	ENST00000377364.3|HIST1H4B|ENSG00000124529.3|histone cluster 1, H4b
hg19_v2_chr4_-_109541539_109541585	0.186733	LHX2	ENST00000509984.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head) 	ENST00000507248.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head) 	ENST00000506795.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head)
hg19_v2_chr5_-_133702761_133702793	0.180428	LHX2	ENST00000521118.1|CDKL3|ENSG00000006837.7|cyclin-dependent kinase-like 3 	ENST00000265334.4|CDKL3|ENSG00000006837.7|cyclin-dependent kinase-like 3 	ENST00000435211.1|CDKL3|ENSG00000006837.7|cyclin-dependent kinase-like 3
hg19_v2_chr6_+_105404899_105404931	0.176394	LHX2	ENST00000345080.4|LIN28B|ENSG00000187772.6|lin-28 homolog B (C. elegans)
hg19_v2_chr1_+_219347203_219347233	0.174162	LHX2	ENST00000366927.3|LYPLAL1|ENSG00000143353.7|lysophospholipase-like 1
hg19_v2_chr12_-_74686314_74686425	0.173937	LHX2	ENST00000551210.1|RP11-81H3.2|ENSG00000251138.2|RP11-81H3.2	ENST00000515416.2|RP11-81H3.2|ENSG00000251138.2|RP11-81H3.2	ENST00000549905.1|RP11-81H3.2|ENSG00000251138.2|RP11-81H3.2
hg19_v2_chr2_-_231084617_231084654	0.169867	LHX2	ENST00000409815.2|SP110|ENSG00000135899.12|SP110 nuclear body protein
hg19_v2_chr4_-_70653673_70653688	0.168291	LHX2	ENST00000512870.1|SULT1B1|ENSG00000173597.4|sulfotransferase family, cytosolic, 1B, member 1
hg19_v2_chr10_-_37891859_37891859	0.160427	LHX2	ENST00000544824.1|MTRNR2L7|ENSG00000256892.1|MT-RNR2-like 7
hg19_v2_chr3_+_57882061_57882085	0.158423	LHX2	ENST00000461354.1|SLMAP|ENSG00000163681.10|sarcolemma associated protein 	ENST00000466255.1|SLMAP|ENSG00000163681.10|sarcolemma associated protein
hg19_v2_chr6_-_26199471_26199494	0.156325	LHX2	ENST00000341023.1|HIST1H2AD|ENSG00000196866.2|histone cluster 1, H2ad
hg19_v2_chr2_+_200472779_200472816	0.156	LHX2	ENST00000427045.1|AC093590.1|ENSG00000238217.1|AC093590.1	ENST00000419243.1|AC093590.1|ENSG00000238217.1|AC093590.1
hg19_v2_chr9_-_125240235_125240235	0.15427	LHX2	ENST00000259357.2|OR1J1|ENSG00000136834.2|olfactory receptor, family 1, subfamily J, member 1
hg19_v2_chr6_-_138833630_138833677	0.151731	LHX2	ENST00000533765.1|NHSL1|ENSG00000135540.7|NHS-like 1
hg19_v2_chr6_-_76072719_76072770	0.143493	LHX2	ENST00000370020.1|FILIP1|ENSG00000118407.10|filamin A interacting protein 1
hg19_v2_chr15_-_42565023_42565070	0.143161	LHX2	ENST00000566474.1|TMEM87A|ENSG00000103978.11|transmembrane protein 87A
hg19_v2_chr18_+_68002675_68002675	0.139691	LHX2	ENST00000584919.1|RP11-41O4.1|ENSG00000266258.1|Uncharacterized protein
hg19_v2_chr2_-_166702601_166702625	0.137387	LHX2	ENST00000428888.1|AC009495.4|ENSG00000229195.1|AC009495.4
hg19_v2_chr4_-_89951028_89951062	0.135744	LHX2	ENST00000506913.1|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr7_-_99716914_99716936	0.135075	LHX2	ENST00000431404.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr14_+_56584414_56584532	0.128732	LHX2	ENST00000559044.1|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chr20_-_31989307_31989367	0.126559	LHX2	ENST00000473997.1|CDK5RAP1|ENSG00000101391.16|CDK5 regulatory subunit associated protein 1 	ENST00000544843.1|CDK5RAP1|ENSG00000101391.16|CDK5 regulatory subunit associated protein 1 	ENST00000346416.2|CDK5RAP1|ENSG00000101391.16|CDK5 regulatory subunit associated protein 1 	ENST00000357886.4|CDK5RAP1|ENSG00000101391.16|CDK5 regulatory subunit associated protein 1 	ENST00000339269.5|CDK5RAP1|ENSG00000101391.16|CDK5 regulatory subunit associated protein 1
hg19_v2_chr1_-_89591749_89591816	0.124635	LHX2	ENST00000370466.3|GBP2|ENSG00000162645.8|guanylate binding protein 2, interferon-inducible
hg19_v2_chr1_+_84630574_84630602	0.117518	LHX2	ENST00000413538.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta 	ENST00000417530.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr19_-_30199516_30199555	0.110201	LHX2	ENST00000591243.1|C19orf12|ENSG00000131943.13|chromosome 19 open reading frame 12
hg19_v2_chr2_+_145780739_145780759	0.107468	LHX2	ENST00000597173.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000602108.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000420472.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding)
hg19_v2_chr20_+_31870927_31870969	0.106119	LHX2	ENST00000253354.1|BPIFB1|ENSG00000125999.6|BPI fold containing family B, member 1
hg19_v2_chr13_+_19756173_19756185	0.103379	LHX2	ENST00000382988.2|RP11-408E5.4|ENSG00000121388.4|RP11-408E5.4
hg19_v2_chr1_+_160370344_160370406	0.102474	LHX2	ENST00000368061.2|VANGL2|ENSG00000162738.5|VANGL planar cell polarity protein 2
hg19_v2_chr20_+_30697298_30697330	0.10235	LHX2	ENST00000398022.2|TM9SF4|ENSG00000101337.11|transmembrane 9 superfamily protein member 4
hg19_v2_chr6_+_130339710_130339745	0.100783	LHX2	ENST00000526087.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000533560.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000361794.2|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila)
hg19_v2_chr17_-_39216344_39216368	0.100598	LHX2	ENST00000391418.2|KRTAP2-3|ENSG00000212724.2|keratin associated protein 2-3
hg19_v2_chr9_-_98268883_98268947	0.0960548	LHX2	ENST00000551630.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000548420.1|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr2_+_145780725_145780735	0.09269	LHX2	ENST00000451478.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding)
hg19_v2_chr2_-_89157161_89157206	0.0904005	LHX2	ENST00000390237.2|IGKC|ENSG00000211592.2|immunoglobulin kappa constant
hg19_v2_chr17_-_62499334_62499553	0.0894416	LHX2	ENST00000579996.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr11_-_104827425_104827425	0.0892718	LHX2	ENST00000393150.3|CASP4|ENSG00000196954.8|caspase 4, apoptosis-related cysteine peptidase
hg19_v2_chr13_+_78315528_78315673	0.0881084	LHX2	ENST00000496045.1|SLAIN1|ENSG00000139737.17|SLAIN motif family, member 1
hg19_v2_chr1_-_85870177_85870208	0.0875123	LHX2	ENST00000542148.1|DDAH1|ENSG00000153904.14|dimethylarginine dimethylaminohydrolase 1
hg19_v2_chr5_+_180682720_180682720	0.0866021	LHX2	ENST00000599439.1|AC008443.1|ENSG00000268397.1|CDNA: FLJ23158 fis, clone LNG09623; Uncharacterized protein
hg19_v2_chrX_+_18725758_18725784	0.0862769	LHX2	ENST00000472826.1|PPEF1|ENSG00000086717.14|protein phosphatase, EF-hand calcium binding domain 1 	ENST00000544635.1|PPEF1|ENSG00000086717.14|protein phosphatase, EF-hand calcium binding domain 1 	ENST00000496075.2|PPEF1|ENSG00000086717.14|protein phosphatase, EF-hand calcium binding domain 1
hg19_v2_chr11_-_4719072_4719089	0.0859997	LHX2	ENST00000396950.3|OR51E2|ENSG00000167332.7|olfactory receptor, family 51, subfamily E, member 2 	ENST00000532598.1|OR51E2|ENSG00000167332.7|olfactory receptor, family 51, subfamily E, member 2
hg19_v2_chr4_+_153021899_153021970	0.0849739	LHX2	ENST00000509332.1|RP11-18H21.1|ENSG00000245954.2|RP11-18H21.1	ENST00000504144.1|RP11-18H21.1|ENSG00000245954.2|RP11-18H21.1	ENST00000499452.2|RP11-18H21.1|ENSG00000245954.2|RP11-18H21.1
hg19_v2_chr3_-_180707306_180707451	0.0803879	LHX2	ENST00000479269.1|DNAJC19|ENSG00000205981.2|DnaJ (Hsp40) homolog, subfamily C, member 19
hg19_v2_chr1_+_210501589_210501609	0.0748476	LHX2	ENST00000413764.2|HHAT|ENSG00000054392.8|hedgehog acyltransferase 	ENST00000541565.1|HHAT|ENSG00000054392.8|hedgehog acyltransferase
hg19_v2_chr10_+_69865866_69865912	0.0745859	LHX2	ENST00000354393.2|MYPN|ENSG00000138347.11|myopalladin
hg19_v2_chr15_-_33180439_33180455	0.0728959	LHX2	ENST00000559610.1|FMN1|ENSG00000248905.4|formin 1
hg19_v2_chr16_+_88636875_88636886	0.0718134	LHX2	ENST00000569435.1|ZC3H18|ENSG00000158545.11|zinc finger CCCH-type containing 18
hg19_v2_chr3_+_62936098_62936146	0.0684828	LHX2	ENST00000475886.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000465684.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000465262.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000468072.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698
hg19_v2_chr6_+_123038689_123038707	0.0655814	LHX2	ENST00000354275.2|PKIB|ENSG00000135549.10|protein kinase (cAMP-dependent, catalytic) inhibitor beta 	ENST00000368446.1|PKIB|ENSG00000135549.10|protein kinase (cAMP-dependent, catalytic) inhibitor beta
hg19_v2_chr21_+_35014829_35014912	0.0642278	LHX2	ENST00000451686.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein)
hg19_v2_chr14_+_101297740_101297818	0.0636036	LHX2	ENST00000555928.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding)
hg19_v2_chr8_+_66955648_66955712	0.0593731	LHX2	ENST00000522619.1|DNAJC5B|ENSG00000147570.5|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
hg19_v2_chr5_+_68860949_68860949	0.0589931	LHX2	ENST00000507595.1|GTF2H2C|ENSG00000183474.11|general transcription factor IIH, polypeptide 2C
hg19_v2_chr4_-_185694872_185695027	0.0563764	LHX2	ENST00000505492.1|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1
hg19_v2_chr15_+_51669513_51669571	0.0548186	LHX2	ENST00000558426.1|GLDN|ENSG00000186417.9|gliomedin
hg19_v2_chr7_-_99716940_99716943	0.0542656	LHX2	ENST00000440225.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr7_-_22234381_22234430	0.05246	LHX2	ENST00000458533.1|RAPGEF5|ENSG00000136237.14|Rap guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr12_+_94071129_94071175	0.0520853	LHX2	ENST00000552983.1|CRADD|ENSG00000169372.8|CASP2 and RIPK1 domain containing adaptor with death domain 	ENST00000332896.3|CRADD|ENSG00000169372.8|CASP2 and RIPK1 domain containing adaptor with death domain 	ENST00000552033.1|CRADD|ENSG00000169372.8|CASP2 and RIPK1 domain containing adaptor with death domain 	ENST00000548483.1|CRADD|ENSG00000169372.8|CASP2 and RIPK1 domain containing adaptor with death domain
hg19_v2_chr2_+_74648848_74648894	0.0515042	LHX2	ENST00000409791.1|WDR54|ENSG00000005448.12|WD repeat domain 54 	ENST00000426787.1|WDR54|ENSG00000005448.12|WD repeat domain 54 	ENST00000348227.4|WDR54|ENSG00000005448.12|WD repeat domain 54
hg19_v2_chr16_-_66864806_66864900	0.0511687	LHX2	ENST00000566336.1|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000394074.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000563185.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000359087.4|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000379463.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000565535.1|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000290810.3|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1
hg19_v2_chr8_-_19459993_19460011	0.0508779	LHX2	ENST00000454498.2|CSGALNACT1|ENSG00000147408.10|chondroitin sulfate N-acetylgalactosaminyltransferase 1 	ENST00000520003.1|CSGALNACT1|ENSG00000147408.10|chondroitin sulfate N-acetylgalactosaminyltransferase 1
hg19_v2_chr16_+_23652773_23652850	0.0505855	LHX2	ENST00000563998.1|DCTN5|ENSG00000166847.5|dynactin 5 (p25) 	ENST00000568589.1|DCTN5|ENSG00000166847.5|dynactin 5 (p25) 	ENST00000568272.1|DCTN5|ENSG00000166847.5|dynactin 5 (p25)
hg19_v2_chr2_-_55276320_55276334	0.0500124	LHX2	ENST00000357376.3|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr20_+_57464200_57464215	0.0490996	LHX2	ENST00000604005.1|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr4_-_120243545_120243562	0.0469314	LHX2	ENST00000274024.3|FABP2|ENSG00000145384.3|fatty acid binding protein 2, intestinal
hg19_v2_chr5_-_67730240_67730308	0.0455526	LHX2	ENST00000507733.1|CTC-537E7.3|ENSG00000248884.1|CTC-537E7.3
hg19_v2_chr3_-_98619999_98620015	0.044889	LHX2	ENST00000449482.1|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr21_-_35014027_35014066	0.0447669	LHX2	ENST00000399442.1|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000413017.2|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000445393.1|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000417979.1|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000426935.1|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000381540.3|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000361534.2|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000381554.3|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1
hg19_v2_chr18_+_29027696_29027774	0.0443138	LHX2	ENST00000257189.4|DSG3|ENSG00000134757.4|desmoglein 3
hg19_v2_chr3_-_160823040_160823151	0.0442052	LHX2	ENST00000484127.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000492353.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000473142.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000468268.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000460353.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000320474.4|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000392781.2|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
hg19_v2_chr6_-_26043885_26043947	0.0433525	LHX2	ENST00000357905.2|HIST1H2BB|ENSG00000196226.2|histone cluster 1, H2bb
hg19_v2_chr12_+_122688090_122688284	0.0427226	LHX2	ENST00000324189.4|B3GNT4|ENSG00000176383.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 	ENST00000546192.1|B3GNT4|ENSG00000176383.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
hg19_v2_chr7_-_99716952_99717021	0.0426301	LHX2	ENST00000523306.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000344095.4|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000417349.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000493322.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000520135.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000418432.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000460673.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000452041.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000452438.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000451699.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000453269.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chrX_+_105937068_105937091	0.042058	LHX2	ENST00000324342.3|RNF128|ENSG00000133135.9|ring finger protein 128, E3 ubiquitin protein ligase
hg19_v2_chr7_-_122840015_122840040	0.0418487	LHX2	ENST00000194130.2|SLC13A1|ENSG00000081800.4|solute carrier family 13 (sodium/sulfate symporter), member 1
hg19_v2_chr2_-_99279928_99279942	0.0395857	LHX2	ENST00000414521.2|MGAT4A|ENSG00000071073.8|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v2_chr13_+_24844979_24844994	0.0392665	LHX2	ENST00000454083.1|SPATA13|ENSG00000182957.11|spermatogenesis associated 13
hg19_v2_chr5_-_78281623_78281661	0.037707	LHX2	ENST00000521117.1|ARSB|ENSG00000113273.11|arylsulfatase B
hg19_v2_chr1_-_232651312_232651312	0.0374707	LHX2	ENST00000262861.4|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr17_+_45000483_45000563	0.0340739	LHX2	ENST00000576910.2|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000439730.2|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000393456.2|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000415811.2|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000575949.1|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000225567.4|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000572403.1|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000570879.1|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2
hg19_v2_chr11_+_120973375_120973375	0.0334725	LHX2	ENST00000264037.2|TECTA|ENSG00000109927.5|tectorin alpha
hg19_v2_chr10_+_96443204_96443251	0.0321276	LHX2	ENST00000339022.5|CYP2C18|ENSG00000108242.8|cytochrome P450, family 2, subfamily C, polypeptide 18
hg19_v2_chr19_+_20188830_20188844	0.0317489	LHX2	ENST00000418063.2|ZNF90|ENSG00000213988.5|zinc finger protein 90
hg19_v2_chr3_-_160823158_160823177	0.0316439	LHX2	ENST00000392779.2|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000392780.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000494173.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
hg19_v2_chr2_-_10587897_10587926	0.0308877	LHX2	ENST00000405333.1|ODC1|ENSG00000115758.8|ornithine decarboxylase 1 	ENST00000443218.1|ODC1|ENSG00000115758.8|ornithine decarboxylase 1
hg19_v2_chr10_-_90712520_90712536	0.0307004	LHX2	ENST00000224784.6|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta
hg19_v2_chr17_+_17082842_17082884	0.0300369	LHX2	ENST00000579361.1|MPRIP|ENSG00000133030.15|myosin phosphatase Rho interacting protein
hg19_v2_chr14_-_23395623_23395665	0.0295958	LHX2	ENST00000556043.1|PRMT5|ENSG00000100462.11|protein arginine methyltransferase 5
hg19_v2_chr7_-_151217166_151217206	0.0295331	LHX2	ENST00000496004.1|RHEB|ENSG00000106615.5|Ras homolog enriched in brain
hg19_v2_chr11_+_94706973_94706987	0.0286854	LHX2	ENST00000536741.1|KDM4D|ENSG00000186280.5|lysine (K)-specific demethylase 4D
hg19_v2_chr7_+_37960163_37960291	0.028541	LHX2	ENST00000199448.4|EPDR1|ENSG00000086289.7|ependymin related 1 	ENST00000559325.1|EPDR1|ENSG00000086289.7|ependymin related 1 	ENST00000423717.1|EPDR1|ENSG00000086289.7|ependymin related 1
hg19_v2_chr2_+_234627424_234627444	0.0279485	LHX2	ENST00000373409.3|UGT1A4|ENSG00000244474.1|UDP glucuronosyltransferase 1 family, polypeptide A4
hg19_v2_chr4_+_48485341_48485394	0.0278153	LHX2	ENST00000273861.4|SLC10A4|ENSG00000145248.6|solute carrier family 10, member 4
hg19_v2_chr4_+_71384300_71384314	0.0272902	LHX2	ENST00000504451.1|AMTN|ENSG00000187689.5|amelotin
hg19_v2_chr21_+_35014783_35014816	0.0270724	LHX2	ENST00000381291.4|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000381285.4|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399367.3|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399352.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399355.2|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399349.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein)
hg19_v2_chr5_-_75008244_75008286	0.0269289	LHX2	ENST00000510798.1|POC5|ENSG00000152359.10|POC5 centriolar protein 	ENST00000446329.2|POC5|ENSG00000152359.10|POC5 centriolar protein
hg19_v2_chr1_+_160709029_160709047	0.0268512	LHX2	ENST00000444090.2|SLAMF7|ENSG00000026751.12|SLAM family member 7 	ENST00000441662.2|SLAMF7|ENSG00000026751.12|SLAM family member 7
hg19_v2_chr11_-_104972158_104972190	0.0265076	LHX2	ENST00000598974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000593315.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000594519.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000415981.2|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525374.1|CARD16|ENSG00000204397.3|caspase recruitment domain family, member 16 	ENST00000375707.1|CARD17|ENSG00000255221.2|caspase recruitment domain family, member 17
hg19_v2_chr14_-_22005343_22005364	0.0265002	LHX2	ENST00000327430.3|SALL2|ENSG00000165821.7|spalt-like transcription factor 2
hg19_v2_chr2_-_55237484_55237585	0.0262654	LHX2	ENST00000394609.2|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr17_-_39140549_39140579	0.0251537	LHX2	ENST00000377755.4|KRT40|ENSG00000204889.6|keratin 40
hg19_v2_chr3_-_131221790_131221835	0.0246915	LHX2	ENST00000512877.1|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3 	ENST00000264995.3|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3 	ENST00000511168.1|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3 	ENST00000425847.2|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3
hg19_v2_chr14_+_56078695_56078784	0.0246241	LHX2	ENST00000416613.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr3_-_129513259_129513392	0.024456	LHX2	ENST00000329333.5|TMCC1|ENSG00000172765.12|transmembrane and coiled-coil domain family 1
hg19_v2_chr2_+_103035102_103035149	0.024209	LHX2	ENST00000264260.2|IL18RAP|ENSG00000115607.5|interleukin 18 receptor accessory protein
hg19_v2_chr1_+_41448820_41448833	0.0237717	LHX2	ENST00000372616.1|CTPS1|ENSG00000171793.9|CTP synthase 1
hg19_v2_chr9_-_28670283_28670283	0.0224475	LHX2	ENST00000379992.2|LINGO2|ENSG00000174482.6|leucine rich repeat and Ig domain containing 2
hg19_v2_chr21_+_35014706_35014767	0.022042	LHX2	ENST00000399353.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000444491.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000381318.3|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein)
hg19_v2_chr13_-_45768841_45768855	0.0220385	LHX2	ENST00000379108.1|KCTD4|ENSG00000180332.5|potassium channel tetramerization domain containing 4
hg19_v2_chr2_+_120436733_120436759	0.0218119	LHX2	ENST00000401466.1|TMEM177|ENSG00000144120.8|transmembrane protein 177 	ENST00000424086.1|TMEM177|ENSG00000144120.8|transmembrane protein 177 	ENST00000272521.6|TMEM177|ENSG00000144120.8|transmembrane protein 177
hg19_v2_chr8_+_55528627_55528631	0.0217619	LHX2	ENST00000220676.1|RP1|ENSG00000104237.6|retinitis pigmentosa 1 (autosomal dominant)
hg19_v2_chr3_+_35722424_35722438	0.0214846	LHX2	ENST00000396481.2|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa
hg19_v2_chr14_-_34420259_34420291	0.0204965	LHX2	ENST00000250457.3|EGLN3|ENSG00000129521.9|egl-9 family hypoxia-inducible factor 3 	ENST00000547327.2|EGLN3|ENSG00000129521.9|egl-9 family hypoxia-inducible factor 3
hg19_v2_chr11_+_63606373_63606418	0.0198915	LHX2	ENST00000402010.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000315032.8|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377809.4|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000413835.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377810.3|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2
hg19_v2_chr7_-_54826869_54826880	0.0198703	LHX2	ENST00000450622.1|SEC61G|ENSG00000132432.9|Sec61 gamma subunit
hg19_v2_chr1_+_95616933_95616933	0.0198284	LHX2	ENST00000604203.1|RP11-57H12.6|ENSG00000271092.1|TMEM56-RWDD3 readthrough
hg19_v2_chr15_+_58430368_58430401	0.0194454	LHX2	ENST00000558772.1|AQP9|ENSG00000103569.5|aquaporin 9 	ENST00000219919.4|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr5_+_118668846_118668885	0.0181911	LHX2	ENST00000513374.1|TNFAIP8|ENSG00000145779.7|tumor necrosis factor, alpha-induced protein 8
hg19_v2_chr13_+_73632897_73632930	0.0177279	LHX2	ENST00000377687.4|KLF5|ENSG00000102554.9|Kruppel-like factor 5 (intestinal)
hg19_v2_chr12_-_49245916_49245932	0.0175826	LHX2	ENST00000552512.1|DDX23|ENSG00000174243.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 	ENST00000551468.1|DDX23|ENSG00000174243.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
hg19_v2_chr11_+_64001962_64002033	0.0171812	LHX2	ENST00000309422.2|VEGFB|ENSG00000173511.5|vascular endothelial growth factor B
hg19_v2_chr17_-_7760457_7760587	0.0165774	LHX2	ENST00000576384.1|LSMD1|ENSG00000183011.9|LSM domain containing 1
hg19_v2_chrX_+_105936982_105937024	0.0154139	LHX2	ENST00000418562.1|RNF128|ENSG00000133135.9|ring finger protein 128, E3 ubiquitin protein ligase
hg19_v2_chr15_-_72521017_72521045	0.0152622	LHX2	ENST00000561609.1|PKM|ENSG00000067225.13|pyruvate kinase, muscle
hg19_v2_chr5_-_175388327_175388416	0.0149336	LHX2	ENST00000432305.2|THOC3|ENSG00000051596.5|THO complex 3 	ENST00000505969.1|THOC3|ENSG00000051596.5|THO complex 3
hg19_v2_chr10_-_14372870_14372944	0.0147997	LHX2	ENST00000357447.2|FRMD4A|ENSG00000151474.15|FERM domain containing 4A
hg19_v2_chr15_-_51535208_51535261	0.0147073	LHX2	ENST00000405913.3|CYP19A1|ENSG00000137869.9|cytochrome P450, family 19, subfamily A, polypeptide 1 	ENST00000559878.1|CYP19A1|ENSG00000137869.9|cytochrome P450, family 19, subfamily A, polypeptide 1
hg19_v2_chr2_-_175712270_175712316	0.0145115	LHX2	ENST00000295497.7|CHN1|ENSG00000128656.9|chimerin 1 	ENST00000444394.1|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr2_+_210517895_210518021	0.0140668	LHX2	ENST00000447185.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr13_-_46952645_46952780	0.0134565	LHX2	ENST00000439642.1|KIAA0226L|ENSG00000102445.14|KIAA0226-like
hg19_v2_chr3_-_100551141_100551158	0.0129831	LHX2	ENST00000478235.1|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein 	ENST00000471901.1|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein
hg19_v2_chr7_-_103848405_103848495	0.0128458	LHX2	ENST00000447452.2|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5 	ENST00000545943.1|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5 	ENST00000297431.4|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5
hg19_v2_chr8_+_22424551_22424585	0.0116733	LHX2	ENST00000523348.1|SORBS3|ENSG00000120896.9|sorbin and SH3 domain containing 3
hg19_v2_chr11_-_46113756_46113773	0.01156	LHX2	ENST00000531959.1|PHF21A|ENSG00000135365.11|PHD finger protein 21A
hg19_v2_chrM_+_12331_12348	0.0113564	LHX2	ENST00000361567.2|MT-ND5|ENSG00000198786.2|mitochondrially encoded NADH dehydrogenase 5
hg19_v2_chr3_+_33155444_33155492	0.0110889	LHX2	ENST00000320954.6|CRTAP|ENSG00000170275.10|cartilage associated protein
hg19_v2_chr18_+_3466248_3466312	0.0105923	LHX2	ENST00000581029.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4	ENST00000581442.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4	ENST00000579007.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4
hg19_v2_chr16_+_24741013_24741058	0.010459	LHX2	ENST00000315183.7|TNRC6A|ENSG00000090905.13|trinucleotide repeat containing 6A 	ENST00000395799.3|TNRC6A|ENSG00000090905.13|trinucleotide repeat containing 6A
hg19_v2_chr1_+_28527070_28527070	0.0103384	LHX2	ENST00000596102.1|AL353354.2|ENSG00000269804.1|AL353354.2
hg19_v2_chr21_-_43735446_43735525	0.00971207	LHX2	ENST00000398431.2|TFF3|ENSG00000160180.14|trefoil factor 3 (intestinal)
hg19_v2_chr10_-_4285923_4286104	0.00943248	LHX2	ENST00000418372.1|LINC00702|ENSG00000233117.2|long intergenic non-protein coding RNA 702 	ENST00000608792.1|LINC00702|ENSG00000233117.2|long intergenic non-protein coding RNA 702
hg19_v2_chr5_-_156536126_156536141	0.00913824	LHX2	ENST00000522593.1|HAVCR2|ENSG00000135077.4|hepatitis A virus cellular receptor 2
hg19_v2_chr15_+_58430567_58430589	0.0089029	LHX2	ENST00000536493.1|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr3_+_35722487_35722507	0.00862378	LHX2	ENST00000441454.1|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa
hg19_v2_chr15_-_72563585_72563628	0.00796904	LHX2	ENST00000287196.9|PARP6|ENSG00000137817.12|poly (ADP-ribose) polymerase family, member 6 	ENST00000260376.7|PARP6|ENSG00000137817.12|poly (ADP-ribose) polymerase family, member 6
hg19_v2_chr2_-_55496174_55496334	0.0079081	LHX2	ENST00000417363.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000412530.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000394600.3|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000366137.2|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000420637.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2
hg19_v2_chr1_+_145883868_145883868	0.00726818	LHX2	ENST00000447947.2|GPR89C|ENSG00000196644.8|G protein-coupled receptor 89C
hg19_v2_chr2_+_173686303_173686325	0.00704121	LHX2	ENST00000397087.3|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr3_-_149095652_149095652	0.00689186	LHX2	ENST00000305366.3|TM4SF1|ENSG00000169908.6|transmembrane 4 L six family member 1
hg19_v2_chr12_-_21928515_21928544	0.00688194	LHX2	ENST00000537950.1|KCNJ8|ENSG00000121361.3|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v2_chr6_+_125524785_125524861	0.00679485	LHX2	ENST00000392482.2|TPD52L1|ENSG00000111907.16|tumor protein D52-like 1
hg19_v2_chr7_-_99717463_99717483	0.00592516	LHX2	ENST00000437822.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr14_+_52313833_52313844	0.00482464	LHX2	ENST00000553560.1|GNG2|ENSG00000186469.4|guanine nucleotide binding protein (G protein), gamma 2
hg19_v2_chr6_+_53883708_53883744	0.0047199	LHX2	ENST00000514921.1|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein 	ENST00000274897.5|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein 	ENST00000370877.2|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein
hg19_v2_chr2_-_128284020_128284091	0.00399632	LHX2	ENST00000295321.4|IWS1|ENSG00000163166.9|IWS1 homolog (S. cerevisiae) 	ENST00000455721.2|IWS1|ENSG00000163166.9|IWS1 homolog (S. cerevisiae)
hg19_v2_chr13_+_33160553_33160564	0.00362367	LHX2	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr4_-_100575781_100575805	0.00277631	LHX2	ENST00000511828.1|RP11-766F14.2|ENSG00000248713.1|Protein LOC285556
hg19_v2_chr9_-_139137648_139137687	0.00273164	LHX2	ENST00000358701.5|QSOX2|ENSG00000165661.11|quiescin Q6 sulfhydryl oxidase 2
hg19_v2_chr16_-_23652570_23652663	0.00163851	LHX2	ENST00000261584.4|PALB2|ENSG00000083093.5|partner and localizer of BRCA2
hg19_v2_chr5_+_179921344_179921423	0.001554	LHX2	ENST00000261951.4|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr5_-_150473127_150473157	0.000746793	LHX2	ENST00000521001.1|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1
hg19_v2_chr4_-_1670632_1670632	0.000739422	LHX2	ENST00000461064.1|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A
hg19_v2_chr3_+_119187785_119187863	0.000695856	LHX2	ENST00000295588.4|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1 	ENST00000476573.1|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1
