hg19_v2_chr5_+_67535647_67535726	0.342256	HOXD1	ENST00000520675.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr4_-_19458597_19458623	0.263738	HOXD1	ENST00000505347.1|RP11-3J1.1|ENSG00000248238.1|RP11-3J1.1
hg19_v2_chr22_-_28490123_28490123	0.259009	HOXD1	ENST00000442232.1|TTC28|ENSG00000100154.10|tetratricopeptide repeat domain 28
hg19_v2_chr7_-_99716914_99716936	0.252945	HOXD1	ENST00000431404.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr3_-_191000172_191000209	0.197371	HOXD1	ENST00000427544.2|UTS2B|ENSG00000188958.5|urotensin 2B
hg19_v2_chr7_+_37723450_37723475	0.168004	HOXD1	ENST00000447769.1|GPR141|ENSG00000187037.4|G protein-coupled receptor 141
hg19_v2_chr11_+_71900703_71900725	0.158205	HOXD1	ENST00000393681.2|FOLR1|ENSG00000110195.7|folate receptor 1 (adult)
hg19_v2_chr11_+_71900572_71900602	0.141965	HOXD1	ENST00000312293.4|FOLR1|ENSG00000110195.7|folate receptor 1 (adult)
hg19_v2_chr4_+_71019903_71019914	0.138593	HOXD1	ENST00000344526.5|C4orf40|ENSG00000187533.9|chromosome 4 open reading frame 40
hg19_v2_chr12_-_52761262_52761267	0.133459	HOXD1	ENST00000257901.3|KRT85|ENSG00000135443.4|keratin 85
hg19_v2_chr20_-_50418947_50418964	0.133113	HOXD1	ENST00000371539.3|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr22_-_24951888_24951910	0.125276	HOXD1	ENST00000404664.3|GUCD1|ENSG00000138867.12|guanylyl cyclase domain containing 1
hg19_v2_chr17_-_57229155_57229198	0.11523	HOXD1	ENST00000584089.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr3_-_126327398_126327398	0.11482	HOXD1	ENST00000383572.2|TXNRD3NB|ENSG00000206483.4|thioredoxin reductase 3 neighbor
hg19_v2_chr2_+_228736335_228736397	0.11403	HOXD1	ENST00000440997.1|DAW1|ENSG00000123977.5|dynein assembly factor with WDR repeat domains 1 	ENST00000545118.1|DAW1|ENSG00000123977.5|dynein assembly factor with WDR repeat domains 1
hg19_v2_chrX_+_107288239_107288259	0.110766	HOXD1	ENST00000217957.5|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr11_-_71823796_71823826	0.1067	HOXD1	ENST00000545680.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000543587.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000538393.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535234.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000227618.4|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535503.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr5_+_148737562_148737621	0.101013	HOXD1	ENST00000274569.4|PCYOX1L|ENSG00000145882.6|prenylcysteine oxidase 1 like
hg19_v2_chr15_-_55562479_55562490	0.100303	HOXD1	ENST00000564609.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr12_+_64798826_64798936	0.0989446	HOXD1	ENST00000540203.1|XPOT|ENSG00000184575.7|exportin, tRNA
hg19_v2_chr4_+_144354644_144354734	0.0966211	HOXD1	ENST00000512843.1|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr11_-_71823715_71823792	0.0956675	HOXD1	ENST00000545944.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000502597.2|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr2_+_191221240_191221262	0.0952562	HOXD1	ENST00000409027.1|INPP1|ENSG00000151689.8|inositol polyphosphate-1-phosphatase 	ENST00000458193.1|INPP1|ENSG00000151689.8|inositol polyphosphate-1-phosphatase
hg19_v2_chr7_-_55620433_55620545	0.0936721	HOXD1	ENST00000418904.1|VOPP1|ENSG00000154978.8|vesicular, overexpressed in cancer, prosurvival protein 1
hg19_v2_chr7_+_99717230_99717321	0.0928519	HOXD1	ENST00000262932.3|CNPY4|ENSG00000166997.3|canopy FGF signaling regulator 4
hg19_v2_chrX_+_107288197_107288212	0.0906784	HOXD1	ENST00000415430.3|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr15_+_63050785_63050810	0.086792	HOXD1	ENST00000472902.1|TLN2|ENSG00000171914.10|talin 2
hg19_v2_chr7_-_99717463_99717483	0.0867675	HOXD1	ENST00000437822.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr22_-_24951814_24951834	0.0858299	HOXD1	ENST00000407973.2|GUCD1|ENSG00000138867.12|guanylyl cyclase domain containing 1
hg19_v2_chr1_-_232651312_232651312	0.0849435	HOXD1	ENST00000262861.4|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr2_+_135596180_135596193	0.0816973	HOXD1	ENST00000283054.4|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase 	ENST00000392928.1|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase
hg19_v2_chr7_-_99716940_99716943	0.0808519	HOXD1	ENST00000440225.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr7_-_99716952_99717021	0.0775508	HOXD1	ENST00000523306.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000344095.4|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000417349.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000493322.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000520135.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000418432.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000460673.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000452041.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000452438.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000451699.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000453269.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chrX_-_19504642_19504642	0.0752432	HOXD1	ENST00000469203.2|MAP3K15|ENSG00000180815.10|mitogen-activated protein kinase kinase kinase 15
hg19_v2_chr4_-_119759795_119759833	0.0718564	HOXD1	ENST00000419654.2|SEC24D|ENSG00000150961.10|SEC24 family member D
hg19_v2_chr19_-_3557570_3557590	0.0716772	HOXD1	ENST00000355415.2|MFSD12|ENSG00000161091.8|major facilitator superfamily domain containing 12
hg19_v2_chr12_+_15699286_15699354	0.0710324	HOXD1	ENST00000442921.2|PTPRO|ENSG00000151490.9|protein tyrosine phosphatase, receptor type, O 	ENST00000542557.1|PTPRO|ENSG00000151490.9|protein tyrosine phosphatase, receptor type, O 	ENST00000445537.2|PTPRO|ENSG00000151490.9|protein tyrosine phosphatase, receptor type, O 	ENST00000544244.1|PTPRO|ENSG00000151490.9|protein tyrosine phosphatase, receptor type, O
hg19_v2_chr12_-_118797475_118797527	0.0681544	HOXD1	ENST00000541786.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000419821.2|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000541878.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr5_+_66300464_66300505	0.0649819	HOXD1	ENST00000436277.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr9_+_124329336_124329406	0.0649631	HOXD1	ENST00000394340.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000436835.1|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000259371.2|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chr11_-_71823266_71823325	0.0646329	HOXD1	ENST00000538919.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000539395.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000542531.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr10_+_99205894_99205954	0.0614937	HOXD1	ENST00000370854.3|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000393760.1|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000414567.1|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000370846.4|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16
hg19_v2_chr11_+_73498898_73498965	0.0608793	HOXD1	ENST00000535529.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000497094.2|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000411840.2|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000535277.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000398483.3|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000542303.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48
hg19_v2_chr20_+_43990576_43990596	0.0608527	HOXD1	ENST00000372727.1|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) 	ENST00000414310.1|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
hg19_v2_chr15_+_58702742_58702777	0.059787	HOXD1	ENST00000356113.6|LIPC|ENSG00000166035.6|lipase, hepatic 	ENST00000414170.3|LIPC|ENSG00000166035.6|lipase, hepatic
hg19_v2_chr1_+_117544366_117544434	0.0571071	HOXD1	ENST00000256652.4|CD101|ENSG00000134256.8|CD101 molecule 	ENST00000369470.1|CD101|ENSG00000134256.8|CD101 molecule
hg19_v2_chr20_-_50419055_50419066	0.0555993	HOXD1	ENST00000217086.4|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr14_+_32798462_32798539	0.0540293	HOXD1	ENST00000280979.4|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chr1_-_151431674_151431691	0.0537615	HOXD1	ENST00000531094.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain
hg19_v2_chr10_-_72142345_72142395	0.0530267	HOXD1	ENST00000373224.1|LRRC20|ENSG00000172731.9|leucine rich repeat containing 20 	ENST00000446961.1|LRRC20|ENSG00000172731.9|leucine rich repeat containing 20 	ENST00000358141.2|LRRC20|ENSG00000172731.9|leucine rich repeat containing 20 	ENST00000357631.2|LRRC20|ENSG00000172731.9|leucine rich repeat containing 20
hg19_v2_chr10_+_99205959_99205981	0.0519484	HOXD1	ENST00000352634.4|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000353979.3|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000370842.2|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000345745.5|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16
hg19_v2_chr10_+_18549645_18549698	0.0503791	HOXD1	ENST00000396576.2|CACNB2|ENSG00000165995.14|calcium channel, voltage-dependent, beta 2 subunit
hg19_v2_chr14_+_32798547_32798606	0.0486626	HOXD1	ENST00000557354.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6 	ENST00000557102.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6 	ENST00000557272.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chrX_+_43515467_43515562	0.0469542	HOXD1	ENST00000338702.3|MAOA|ENSG00000189221.5|monoamine oxidase A 	ENST00000542639.1|MAOA|ENSG00000189221.5|monoamine oxidase A
hg19_v2_chr1_-_151431647_151431669	0.0462803	HOXD1	ENST00000368863.2|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000409503.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000491586.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000533351.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000540984.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain
hg19_v2_chr5_+_66300446_66300463	0.0448119	HOXD1	ENST00000261569.7|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr17_+_18086392_18086434	0.0427162	HOXD1	ENST00000541285.1|ALKBH5|ENSG00000091542.8|alkB, alkylation repair homolog 5 (E. coli)
hg19_v2_chr19_-_36001113_36001196	0.0405188	HOXD1	ENST00000434389.1|DMKN|ENSG00000161249.16|dermokine
hg19_v2_chr11_-_26593649_26593670	0.0391743	HOXD1	ENST00000455601.2|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr12_+_29376592_29376620	0.0389823	HOXD1	ENST00000182377.4|FAR2|ENSG00000064763.6|fatty acyl CoA reductase 2
hg19_v2_chr1_-_151431909_151431987	0.0375046	HOXD1	ENST00000361398.3|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000271715.2|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain
hg19_v2_chr4_-_150736962_150736980	0.0371447	HOXD1	ENST00000502345.1|RP11-526A4.1|ENSG00000234828.3|RP11-526A4.1	ENST00000510975.1|RP11-526A4.1|ENSG00000234828.3|RP11-526A4.1	ENST00000511993.1|RP11-526A4.1|ENSG00000234828.3|RP11-526A4.1
hg19_v2_chr12_+_29376673_29376683	0.0337653	HOXD1	ENST00000547116.1|FAR2|ENSG00000064763.6|fatty acyl CoA reductase 2
hg19_v2_chr2_+_135596106_135596137	0.0323894	HOXD1	ENST00000356140.5|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase
hg19_v2_chr4_-_74486347_74486348	0.0305185	HOXD1	ENST00000342081.3|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr1_-_92952433_92952489	0.0293037	HOXD1	ENST00000294702.5|GFI1|ENSG00000162676.7|growth factor independent 1 transcription repressor
hg19_v2_chr15_-_55562582_55562617	0.0289473	HOXD1	ENST00000396307.2|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr12_+_109577202_109577289	0.0261838	HOXD1	ENST00000377848.3|ACACB|ENSG00000076555.11|acetyl-CoA carboxylase beta 	ENST00000377854.5|ACACB|ENSG00000076555.11|acetyl-CoA carboxylase beta
hg19_v2_chr14_+_56584414_56584532	0.0185005	HOXD1	ENST00000559044.1|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chr15_-_37393406_37393528	0.0148669	HOXD1	ENST00000338564.5|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000558313.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000340545.5|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chrX_+_77154935_77155012	0.0148488	HOXD1	ENST00000481445.1|COX7B|ENSG00000131174.4|cytochrome c oxidase subunit VIIb
hg19_v2_chr3_-_99569821_99569919	0.0138474	HOXD1	ENST00000487087.1|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like
hg19_v2_chr13_-_36050819_36050834	0.0129281	HOXD1	ENST00000379919.4|MAB21L1|ENSG00000180660.6|mab-21-like 1 (C. elegans)
hg19_v2_chr15_-_55563072_55563135	0.0119702	HOXD1	ENST00000567380.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family 	ENST00000565972.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family 	ENST00000569493.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr7_-_81399438_81399514	0.0119593	HOXD1	ENST00000222390.5|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr4_+_158493642_158493770	0.0116317	HOXD1	ENST00000507108.1|RP11-364P22.1|ENSG00000234111.2|RP11-364P22.1	ENST00000455598.1|RP11-364P22.1|ENSG00000234111.2|RP11-364P22.1	ENST00000509450.1|RP11-364P22.1|ENSG00000234111.2|RP11-364P22.1
hg19_v2_chr2_-_99871570_99871745	0.0106793	HOXD1	ENST00000333017.2|LYG2|ENSG00000185674.5|lysozyme G-like 2 	ENST00000409679.1|LYG2|ENSG00000185674.5|lysozyme G-like 2 	ENST00000423306.1|LYG2|ENSG00000185674.5|lysozyme G-like 2
hg19_v2_chr1_-_201140673_201140702	0.00958199	HOXD1	ENST00000367333.2|TMEM9|ENSG00000116857.12|transmembrane protein 9
hg19_v2_chr11_-_102709441_102709441	0.00936334	HOXD1	ENST00000434103.1|MMP3|ENSG00000149968.7|matrix metallopeptidase 3 (stromelysin 1, progelatinase)
hg19_v2_chr17_-_27418537_27418537	0.00924195	HOXD1	ENST00000408971.2|TIAF1|ENSG00000221995.4|TGFB1-induced anti-apoptotic factor 1
hg19_v2_chr8_+_55528627_55528631	0.0087254	HOXD1	ENST00000220676.1|RP1|ENSG00000104237.6|retinitis pigmentosa 1 (autosomal dominant)
hg19_v2_chr16_+_53133070_53133081	0.00843844	HOXD1	ENST00000565832.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr8_-_49833978_49833996	0.00833153	HOXD1	ENST00000020945.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr5_+_63802109_63802139	0.00775585	HOXD1	ENST00000334025.2|RGS7BP|ENSG00000186479.4|regulator of G-protein signaling 7 binding protein
hg19_v2_chr5_-_20575959_20575997	0.00611289	HOXD1	ENST00000507958.1|CDH18|ENSG00000145526.7|cadherin 18, type 2
hg19_v2_chr1_-_190446759_190446774	0.00223167	HOXD1	ENST00000367462.3|BRINP3|ENSG00000162670.8|bone morphogenetic protein/retinoic acid inducible neural-specific 3
hg19_v2_chr4_-_139051839_139051863	0.00100217	HOXD1	ENST00000514600.1|LINC00616|ENSG00000248307.1|long intergenic non-protein coding RNA 616 	ENST00000513895.1|LINC00616|ENSG00000248307.1|long intergenic non-protein coding RNA 616 	ENST00000512536.1|LINC00616|ENSG00000248307.1|long intergenic non-protein coding RNA 616
