hg19_v2_chr7_-_35013217_35013217	2.37968	HMGA1	ENST00000446375.1|DPY19L1|ENSG00000173852.9|dpy-19-like 1 (C. elegans)
hg19_v2_chr8_-_90993869_90993920	1.89779	HMGA1	ENST00000517772.1|NBN|ENSG00000104320.9|nibrin
hg19_v2_chr12_+_20963647_20963666	1.68519	HMGA1	ENST00000381545.3|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3
hg19_v2_chr3_-_148939598_148939622	1.59317	HMGA1	ENST00000455472.3|CP|ENSG00000047457.9|ceruloplasmin (ferroxidase)
hg19_v2_chr7_-_81635106_81635130	1.57377	HMGA1	ENST00000443883.1|CACNA2D1|ENSG00000153956.11|calcium channel, voltage-dependent, alpha 2/delta subunit 1
hg19_v2_chr14_+_61449197_61449275	1.5247	HMGA1	ENST00000533744.2|SLC38A6|ENSG00000139974.11|solute carrier family 38, member 6
hg19_v2_chr12_-_100656134_100656134	1.43605	HMGA1	ENST00000548313.1|DEPDC4|ENSG00000166153.12|DEP domain containing 4
hg19_v2_chr1_+_196621002_196621021	1.36189	HMGA1	ENST00000367429.4|CFH|ENSG00000000971.11|complement factor H 	ENST00000439155.2|CFH|ENSG00000000971.11|complement factor H
hg19_v2_chr3_+_164924716_164924750	1.32102	HMGA1	ENST00000470138.1|RP11-85M11.2|ENSG00000244128.1|RP11-85M11.2	ENST00000498616.1|RP11-85M11.2|ENSG00000244128.1|RP11-85M11.2
hg19_v2_chr1_+_95616933_95616933	1.28592	HMGA1	ENST00000604203.1|RP11-57H12.6|ENSG00000271092.1|TMEM56-RWDD3 readthrough
hg19_v2_chr21_+_35553045_35553067	1.28156	HMGA1	ENST00000416145.1|LINC00310|ENSG00000227456.3|long intergenic non-protein coding RNA 310 	ENST00000430922.1|LINC00310|ENSG00000227456.3|long intergenic non-protein coding RNA 310 	ENST00000419881.2|LINC00310|ENSG00000227456.3|long intergenic non-protein coding RNA 310
hg19_v2_chr12_+_20963632_20963645	1.26486	HMGA1	ENST00000540853.1|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3 	ENST00000261196.2|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3
hg19_v2_chr4_+_78804393_78804393	1.2175	HMGA1	ENST00000502384.1|MRPL1|ENSG00000169288.13|mitochondrial ribosomal protein L1
hg19_v2_chr6_-_56492816_56492963	1.12782	HMGA1	ENST00000522360.1|DST|ENSG00000151914.13|dystonin
hg19_v2_chr9_-_3469181_3469181	1.08611	HMGA1	ENST00000366116.2|AL365202.1|ENSG00000203286.4|Uncharacterized protein
hg19_v2_chr9_-_70465758_70465758	1.06982	HMGA1	ENST00000489273.1|CBWD5|ENSG00000147996.12|COBW domain containing 5
hg19_v2_chr4_-_155533787_155534119	1.02501	HMGA1	ENST00000407946.1|FGG|ENSG00000171557.12|fibrinogen gamma chain 	ENST00000405164.1|FGG|ENSG00000171557.12|fibrinogen gamma chain 	ENST00000336098.3|FGG|ENSG00000171557.12|fibrinogen gamma chain 	ENST00000393846.2|FGG|ENSG00000171557.12|fibrinogen gamma chain 	ENST00000404648.3|FGG|ENSG00000171557.12|fibrinogen gamma chain 	ENST00000443553.1|FGG|ENSG00000171557.12|fibrinogen gamma chain
hg19_v2_chr4_-_164265984_164266009	1.0215	HMGA1	ENST00000511901.1|NPY1R|ENSG00000164128.2|neuropeptide Y receptor Y1
hg19_v2_chr5_-_87516448_87516544	1.00657	HMGA1	ENST00000511218.1|TMEM161B|ENSG00000164180.9|transmembrane protein 161B
hg19_v2_chr1_+_196621156_196621192	1.00152	HMGA1	ENST00000359637.2|CFH|ENSG00000000971.11|complement factor H
hg19_v2_chr4_+_55095428_55095475	0.953458	HMGA1	ENST00000508170.1|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide 	ENST00000512143.1|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chr2_+_162101247_162101266	0.929137	HMGA1	ENST00000439050.1|AC009299.3|ENSG00000227403.1|AC009299.3	ENST00000436506.1|AC009299.3|ENSG00000227403.1|AC009299.3
hg19_v2_chr12_+_41136144_41136158	0.891145	HMGA1	ENST00000548005.1|CNTN1|ENSG00000018236.10|contactin 1 	ENST00000552248.1|CNTN1|ENSG00000018236.10|contactin 1
hg19_v2_chr10_+_94590910_94590942	0.882441	HMGA1	ENST00000371547.4|EXOC6|ENSG00000138190.12|exocyst complex component 6
hg19_v2_chr10_+_94594351_94594467	0.853691	HMGA1	ENST00000371552.4|EXOC6|ENSG00000138190.12|exocyst complex component 6
hg19_v2_chr4_+_155484155_155484178	0.823249	HMGA1	ENST00000509493.1|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr2_-_165630264_165630300	0.808515	HMGA1	ENST00000452626.1|COBLL1|ENSG00000082438.11|cordon-bleu WH2 repeat protein-like 1
hg19_v2_chr2_-_202298268_202298283	0.80848	HMGA1	ENST00000440597.1|TRAK2|ENSG00000115993.7|trafficking protein, kinesin binding 2
hg19_v2_chr12_+_65996599_65996667	0.804823	HMGA1	ENST00000539116.1|RP11-221N13.3|ENSG00000256268.1|RP11-221N13.3	ENST00000541391.1|RP11-221N13.3|ENSG00000256268.1|RP11-221N13.3
hg19_v2_chr14_+_73563735_73563751	0.762247	HMGA1	ENST00000532192.1|RBM25|ENSG00000119707.9|RNA binding motif protein 25
hg19_v2_chrX_-_20237059_20237081	0.760321	HMGA1	ENST00000457145.1|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr6_+_151358048_151358110	0.757462	HMGA1	ENST00000450635.1|MTHFD1L|ENSG00000120254.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
hg19_v2_chr14_+_58797974_58798011	0.755347	HMGA1	ENST00000417477.2|ARID4A|ENSG00000032219.14|AT rich interactive domain 4A (RBP1-like)
hg19_v2_chr1_+_219347186_219347197	0.736885	HMGA1	ENST00000366928.5|LYPLAL1|ENSG00000143353.7|lysophospholipase-like 1
hg19_v2_chr3_+_136649311_136649360	0.731635	HMGA1	ENST00000469404.1|NCK1|ENSG00000158092.2|NCK adaptor protein 1 	ENST00000467911.1|NCK1|ENSG00000158092.2|NCK adaptor protein 1
hg19_v2_chr12_-_91546926_91546972	0.717425	HMGA1	ENST00000550758.1|DCN|ENSG00000011465.12|decorin
hg19_v2_chr2_-_187367356_187367356	0.715495	HMGA1	ENST00000595956.1|AC018867.2|ENSG00000268846.1|AC018867.2
hg19_v2_chr1_+_186265399_186265414	0.692334	HMGA1	ENST00000367486.3|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367484.3|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000533951.1|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367482.4|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367483.4|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367485.4|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000445192.2|PRG4|ENSG00000116690.7|proteoglycan 4
hg19_v2_chr1_+_219347203_219347233	0.690449	HMGA1	ENST00000366927.3|LYPLAL1|ENSG00000143353.7|lysophospholipase-like 1
hg19_v2_chr12_-_102591604_102591623	0.678835	HMGA1	ENST00000329406.4|PMCH|ENSG00000183395.4|pro-melanin-concentrating hormone
hg19_v2_chr2_+_29001711_29001866	0.676142	HMGA1	ENST00000418910.1|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr8_+_107738240_107738340	0.664321	HMGA1	ENST00000449762.2|OXR1|ENSG00000164830.13|oxidation resistance 1 	ENST00000297447.6|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chr5_-_43515125_43515164	0.660257	HMGA1	ENST00000509489.1|C5orf34|ENSG00000172244.4|chromosome 5 open reading frame 34
hg19_v2_chr5_+_40841410_40841489	0.626041	HMGA1	ENST00000381677.3|CARD6|ENSG00000132357.9|caspase recruitment domain family, member 6
hg19_v2_chr1_-_108231101_108231133	0.623892	HMGA1	ENST00000544443.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000415432.2|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr6_+_12008986_12009016	0.609669	HMGA1	ENST00000491710.1|HIVEP1|ENSG00000095951.12|human immunodeficiency virus type I enhancer binding protein 1
hg19_v2_chr12_+_9144626_9144666	0.604122	HMGA1	ENST00000543895.1|KLRG1|ENSG00000139187.5|killer cell lectin-like receptor subfamily G, member 1
hg19_v2_chr3_-_122102065_122102101	0.594221	HMGA1	ENST00000479899.1|CCDC58|ENSG00000160124.5|coiled-coil domain containing 58 	ENST00000291458.5|CCDC58|ENSG00000160124.5|coiled-coil domain containing 58 	ENST00000497726.1|CCDC58|ENSG00000160124.5|coiled-coil domain containing 58
hg19_v2_chr5_+_158737824_158737941	0.589021	HMGA1	ENST00000521472.1|AC008697.1|ENSG00000249738.2|AC008697.1
hg19_v2_chr6_-_106773610_106773700	0.584254	HMGA1	ENST00000369076.3|ATG5|ENSG00000057663.8|autophagy related 5 	ENST00000369070.1|ATG5|ENSG00000057663.8|autophagy related 5
hg19_v2_chr2_-_228244013_228244027	0.583137	HMGA1	ENST00000304568.3|TM4SF20|ENSG00000168955.3|transmembrane 4 L six family member 20
hg19_v2_chr2_+_145780739_145780759	0.57533	HMGA1	ENST00000597173.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000602108.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000420472.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding)
hg19_v2_chr7_-_92777606_92777723	0.568303	HMGA1	ENST00000437805.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000446959.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000439952.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000414791.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000446033.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000411955.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000318238.4|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like
hg19_v2_chr9_-_47314222_47314322	0.564568	HMGA1	ENST00000420228.1|AL953854.2|ENSG00000236029.4|AL953854.2	ENST00000438517.1|AL953854.2|ENSG00000236029.4|AL953854.2	ENST00000414020.1|AL953854.2|ENSG00000236029.4|AL953854.2
hg19_v2_chr14_+_57671888_57671888	0.560098	HMGA1	ENST00000391612.1|AL391152.1|ENSG00000212928.1|AL391152.1
hg19_v2_chr9_-_69229650_69229650	0.556368	HMGA1	ENST00000416428.1|CBWD6|ENSG00000204790.8|COBW domain containing 6
hg19_v2_chrX_-_20236970_20237027	0.549545	HMGA1	ENST00000379548.4|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr14_+_56078695_56078784	0.542431	HMGA1	ENST00000416613.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chrY_+_14958970_14958970	0.538026	HMGA1	ENST00000453031.1|USP9Y|ENSG00000114374.8|ubiquitin specific peptidase 9, Y-linked
hg19_v2_chr17_-_64216748_64216865	0.529315	HMGA1	ENST00000585162.1|APOH|ENSG00000091583.6|apolipoprotein H (beta-2-glycoprotein I)
hg19_v2_chr15_+_71228826_71228879	0.527244	HMGA1	ENST00000558456.1|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49 	ENST00000560158.2|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49 	ENST00000558808.1|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49 	ENST00000559806.1|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49 	ENST00000559069.1|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49
hg19_v2_chr8_+_107738343_107738413	0.525578	HMGA1	ENST00000521592.1|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chr1_-_86848760_86848879	0.521502	HMGA1	ENST00000460698.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like
hg19_v2_chr3_+_171561127_171561306	0.520696	HMGA1	ENST00000334567.5|TMEM212|ENSG00000186329.5|transmembrane protein 212 	ENST00000450693.1|TMEM212|ENSG00000186329.5|transmembrane protein 212
hg19_v2_chr5_+_68513622_68513665	0.519043	HMGA1	ENST00000512880.1|MRPS36|ENSG00000134056.7|mitochondrial ribosomal protein S36 	ENST00000602380.1|MRPS36|ENSG00000134056.7|mitochondrial ribosomal protein S36
hg19_v2_chr13_+_76378305_76378354	0.51728	HMGA1	ENST00000526371.1|LMO7|ENSG00000136153.15|LIM domain 7 	ENST00000526528.1|LMO7|ENSG00000136153.15|LIM domain 7
hg19_v2_chr1_+_207943667_207943684	0.515277	HMGA1	ENST00000462968.2|CD46|ENSG00000117335.14|CD46 molecule, complement regulatory protein
hg19_v2_chr1_+_92632542_92632609	0.512656	HMGA1	ENST00000409154.4|KIAA1107|ENSG00000069712.9|KIAA1107 	ENST00000370378.4|KIAA1107|ENSG00000069712.9|KIAA1107
hg19_v2_chr2_+_145780725_145780735	0.512148	HMGA1	ENST00000451478.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding)
hg19_v2_chr7_+_116502605_116502664	0.505313	HMGA1	ENST00000458284.2|CAPZA2|ENSG00000198898.8|capping protein (actin filament) muscle Z-line, alpha 2 	ENST00000490693.1|CAPZA2|ENSG00000198898.8|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v2_chr4_-_159080806_159080833	0.504735	HMGA1	ENST00000590648.1|FAM198B|ENSG00000164125.11|family with sequence similarity 198, member B
hg19_v2_chr8_-_123706338_123706351	0.502171	HMGA1	ENST00000521608.1|RP11-973F15.1|ENSG00000253819.1|long intergenic non-protein coding RNA 1151
hg19_v2_chr5_-_43515231_43515274	0.500297	HMGA1	ENST00000306862.2|C5orf34|ENSG00000172244.4|chromosome 5 open reading frame 34
hg19_v2_chr6_-_10115007_10115007	0.488108	HMGA1	ENST00000485268.1|OFCC1|ENSG00000181355.16|orofacial cleft 1 candidate 1
hg19_v2_chr10_+_32856764_32856764	0.486064	HMGA1	ENST00000375030.2|C10orf68|ENSG00000150076.18|Homo sapiens coiled-coil domain containing 7 (CCDC7), transcript variant 5, mRNA. 	ENST00000375028.3|C10orf68|ENSG00000150076.18|Homo sapiens coiled-coil domain containing 7 (CCDC7), transcript variant 5, mRNA.
hg19_v2_chr18_+_20494078_20494108	0.484655	HMGA1	ENST00000579124.1|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000577588.1|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000582354.1|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000581819.1|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8
hg19_v2_chr9_-_104145795_104145806	0.484279	HMGA1	ENST00000259407.2|BAAT|ENSG00000136881.7|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)
hg19_v2_chr2_+_64069459_64069579	0.479402	HMGA1	ENST00000445915.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2 	ENST00000475462.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr11_+_17316870_17316897	0.477203	HMGA1	ENST00000458064.2|NUCB2|ENSG00000070081.11|nucleobindin 2
hg19_v2_chr17_-_39341594_39341594	0.476565	HMGA1	ENST00000398472.1|KRTAP4-1|ENSG00000198443.5|keratin associated protein 4-1
hg19_v2_chr15_+_35270552_35270552	0.476354	HMGA1	ENST00000391457.2|AC114546.1|ENSG00000212768.2|HCG37415; PRO1914; Uncharacterized protein
hg19_v2_chr16_+_53241854_53241953	0.475969	HMGA1	ENST00000565803.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr4_+_141294628_141294821	0.475892	HMGA1	ENST00000512749.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000608372.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000506597.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000394201.4|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000510586.1|SCOC|ENSG00000153130.13|short coiled-coil protein
hg19_v2_chr15_+_63188009_63188017	0.468649	HMGA1	ENST00000557900.1|RP11-1069G10.2|ENSG00000259727.1|RP11-1069G10.2
hg19_v2_chr2_+_145780767_145780811	0.468122	HMGA1	ENST00000599358.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000596278.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000596747.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000608652.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000609705.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000608432.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000596970.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000602041.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000601578.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000596034.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000414195.2|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000594837.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding)
hg19_v2_chr2_+_114195268_114195340	0.464357	HMGA1	ENST00000259199.4|CBWD2|ENSG00000136682.10|COBW domain containing 2 	ENST00000416503.2|CBWD2|ENSG00000136682.10|COBW domain containing 2 	ENST00000433343.2|CBWD2|ENSG00000136682.10|COBW domain containing 2
hg19_v2_chr3_-_148939835_148939842	0.46272	HMGA1	ENST00000264613.6|CP|ENSG00000047457.9|ceruloplasmin (ferroxidase)
hg19_v2_chr13_-_49975632_49975735	0.453656	HMGA1	ENST00000457041.1|CAB39L|ENSG00000102547.14|calcium binding protein 39-like 	ENST00000355854.4|CAB39L|ENSG00000102547.14|calcium binding protein 39-like
hg19_v2_chr19_-_44384291_44384291	0.453294	HMGA1	ENST00000324394.6|ZNF404|ENSG00000176222.7|zinc finger protein 404
hg19_v2_chr1_+_78470530_78470551	0.448285	HMGA1	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chrM_+_8527_8546	0.446614	HMGA1	ENST00000361899.2|MT-ATP6|ENSG00000198899.2|mitochondrially encoded ATP synthase 6
hg19_v2_chr2_+_103378472_103378496	0.445911	HMGA1	ENST00000412401.2|TMEM182|ENSG00000170417.10|transmembrane protein 182
hg19_v2_chr9_+_86595626_86595760	0.444717	HMGA1	ENST00000445877.1|RMI1|ENSG00000178966.11|RecQ mediated genome instability 1 	ENST00000325875.3|RMI1|ENSG00000178966.11|RecQ mediated genome instability 1
hg19_v2_chr10_-_102045882_102045905	0.443735	HMGA1	ENST00000579542.1|BLOC1S2|ENSG00000196072.7|biogenesis of lysosomal organelles complex-1, subunit 2
hg19_v2_chr11_-_111781554_111781584	0.442178	HMGA1	ENST00000526167.1|CRYAB|ENSG00000109846.3|crystallin, alpha B 	ENST00000528961.1|CRYAB|ENSG00000109846.3|crystallin, alpha B
hg19_v2_chr14_+_39703084_39703110	0.436116	HMGA1	ENST00000553728.1|RP11-407N17.3|ENSG00000258941.2|cTAGE family member 5 isoform 4
hg19_v2_chr3_-_107596910_107596940	0.43512	HMGA1	ENST00000464359.2|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000464823.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000466155.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000473528.2|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000608306.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000488852.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000608137.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000608307.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000609429.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000601385.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000475362.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000600240.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000600749.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635
hg19_v2_chr4_+_95128996_95129056	0.431737	HMGA1	ENST00000457823.2|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr12_-_54653313_54653416	0.428835	HMGA1	ENST00000550411.1|CBX5|ENSG00000094916.9|chromobox homolog 5 	ENST00000439541.2|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr15_+_77713222_77713271	0.428301	HMGA1	ENST00000558176.1|HMG20A|ENSG00000140382.10|high mobility group 20A
hg19_v2_chr5_+_68860949_68860949	0.427512	HMGA1	ENST00000507595.1|GTF2H2C|ENSG00000183474.11|general transcription factor IIH, polypeptide 2C
hg19_v2_chr6_+_153552455_153552455	0.424128	HMGA1	ENST00000392385.2|AL590867.1|ENSG00000213121.2|Uncharacterized protein; cDNA FLJ59044, highly similar to LINE-1 reverse transcriptase homolog
hg19_v2_chr2_-_87248975_87248975	0.421651	HMGA1	ENST00000409310.2|PLGLB1|ENSG00000183281.10|plasminogen-like B1 	ENST00000355705.3|PLGLB1|ENSG00000183281.10|plasminogen-like B1
hg19_v2_chr4_+_90033968_90033968	0.420998	HMGA1	ENST00000317005.2|TIGD2|ENSG00000180346.2|tigger transposable element derived 2
hg19_v2_chr17_+_70036164_70036164	0.419907	HMGA1	ENST00000602013.1|AC007461.1|ENSG00000267893.1|Uncharacterized protein
hg19_v2_chr4_+_95129061_95129198	0.418776	HMGA1	ENST00000354268.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr3_+_142342228_142342236	0.418478	HMGA1	ENST00000337777.3|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr5_-_54988448_54988545	0.417861	HMGA1	ENST00000503817.1|SLC38A9|ENSG00000177058.7|solute carrier family 38, member 9 	ENST00000512595.1|SLC38A9|ENSG00000177058.7|solute carrier family 38, member 9
hg19_v2_chr4_+_109571740_109571792	0.417446	HMGA1	ENST00000361564.4|OSTC|ENSG00000198856.8|oligosaccharyltransferase complex subunit (non-catalytic)
hg19_v2_chr14_+_102276209_102276242	0.414382	HMGA1	ENST00000445439.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000334743.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557095.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr5_-_41794663_41794702	0.413653	HMGA1	ENST00000510634.1|OXCT1|ENSG00000083720.8|3-oxoacid CoA transferase 1
hg19_v2_chr14_+_56127989_56128008	0.412863	HMGA1	ENST00000555573.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr6_+_145118873_145118881	0.410975	HMGA1	ENST00000432686.1|UTRN|ENSG00000152818.14|utrophin 	ENST00000417142.1|UTRN|ENSG00000152818.14|utrophin
hg19_v2_chr10_-_36812323_36812323	0.408896	HMGA1	ENST00000543053.1|NAMPTL|ENSG00000229644.4|nicotinamide phosphoribosyltransferase-like
hg19_v2_chr7_+_36450169_36450224	0.40298	HMGA1	ENST00000428612.1|ANLN|ENSG00000011426.6|anillin, actin binding protein
hg19_v2_chr15_+_55611401_55611450	0.402227	HMGA1	ENST00000566999.1|PIGB|ENSG00000069943.5|phosphatidylinositol glycan anchor biosynthesis, class B
hg19_v2_chr1_-_197169672_197169672	0.397691	HMGA1	ENST00000367405.4|ZBTB41|ENSG00000177888.7|zinc finger and BTB domain containing 41
hg19_v2_chr15_-_80263506_80263553	0.397376	HMGA1	ENST00000335661.6|BCL2A1|ENSG00000140379.7|BCL2-related protein A1
hg19_v2_chr12_-_91505608_91505608	0.394456	HMGA1	ENST00000266718.4|LUM|ENSG00000139329.4|lumican
hg19_v2_chr3_-_149510553_149510610	0.390655	HMGA1	ENST00000462519.2|ANKUB1|ENSG00000206199.5|ankyrin repeat and ubiquitin domain containing 1 	ENST00000446160.1|ANKUB1|ENSG00000206199.5|ankyrin repeat and ubiquitin domain containing 1 	ENST00000383050.3|ANKUB1|ENSG00000206199.5|ankyrin repeat and ubiquitin domain containing 1
hg19_v2_chr16_-_66907139_66907169	0.388503	HMGA1	ENST00000561579.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1
hg19_v2_chr1_+_90098606_90098635	0.376279	HMGA1	ENST00000370454.4|LRRC8C|ENSG00000171488.10|leucine rich repeat containing 8 family, member C
hg19_v2_chr1_-_220219775_220219859	0.374135	HMGA1	ENST00000609181.1|EPRS|ENSG00000136628.13|glutamyl-prolyl-tRNA synthetase
hg19_v2_chr2_+_29353520_29353557	0.372599	HMGA1	ENST00000438819.1|CLIP4|ENSG00000115295.15|CAP-GLY domain containing linker protein family, member 4
hg19_v2_chr17_-_39183452_39183468	0.370585	HMGA1	ENST00000361883.5|KRTAP1-5|ENSG00000221852.4|keratin associated protein 1-5
hg19_v2_chr12_+_28410128_28410133	0.369871	HMGA1	ENST00000381259.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91 	ENST00000381256.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91
hg19_v2_chr1_-_28384598_28384680	0.368037	HMGA1	ENST00000373864.1|EYA3|ENSG00000158161.11|eyes absent homolog 3 (Drosophila)
hg19_v2_chr1_+_89246647_89246728	0.365573	HMGA1	ENST00000544045.1|PKN2|ENSG00000065243.14|protein kinase N2
hg19_v2_chr2_+_105050794_105050854	0.362621	HMGA1	ENST00000429464.1|AC013402.2|ENSG00000235597.1|long intergenic non-protein coding RNA 1102 	ENST00000414442.1|AC013402.2|ENSG00000235597.1|long intergenic non-protein coding RNA 1102 	ENST00000447380.1|AC013402.2|ENSG00000235597.1|long intergenic non-protein coding RNA 1102
hg19_v2_chr5_+_158690089_158690089	0.362612	HMGA1	ENST00000296786.6|UBLCP1|ENSG00000164332.6|ubiquitin-like domain containing CTD phosphatase 1
hg19_v2_chr14_+_45366472_45366514	0.357088	HMGA1	ENST00000325192.3|C14orf28|ENSG00000179476.3|chromosome 14 open reading frame 28
hg19_v2_chr9_-_115095123_115095175	0.355342	HMGA1	ENST00000458258.1|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3
hg19_v2_chr1_+_204494618_204494676	0.355308	HMGA1	ENST00000367180.1|MDM4|ENSG00000198625.8|Mdm4 p53 binding protein homolog (mouse) 	ENST00000391947.2|MDM4|ENSG00000198625.8|Mdm4 p53 binding protein homolog (mouse)
hg19_v2_chr3_+_135684515_135684620	0.354684	HMGA1	ENST00000264977.3|PPP2R3A|ENSG00000073711.6|protein phosphatase 2, regulatory subunit B'', alpha 	ENST00000490467.1|PPP2R3A|ENSG00000073711.6|protein phosphatase 2, regulatory subunit B'', alpha
hg19_v2_chr2_-_225434538_225434545	0.353261	HMGA1	ENST00000409096.1|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr8_+_107593198_107593207	0.352923	HMGA1	ENST00000517686.1|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chr4_+_144303093_144303132	0.352839	HMGA1	ENST00000505913.1|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr14_+_67831576_67831615	0.349048	HMGA1	ENST00000555876.1|EIF2S1|ENSG00000134001.8|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v2_chr12_+_21284118_21284146	0.347949	HMGA1	ENST00000256958.2|SLCO1B1|ENSG00000134538.2|solute carrier organic anion transporter family, member 1B1
hg19_v2_chrX_-_138914394_138914447	0.347511	HMGA1	ENST00000327569.3|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000361648.2|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000370543.1|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000359686.2|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C
hg19_v2_chr8_+_104426942_104427102	0.343692	HMGA1	ENST00000297579.5|DCAF13|ENSG00000164934.9|DDB1 and CUL4 associated factor 13
hg19_v2_chr14_+_62164340_62164443	0.341749	HMGA1	ENST00000557538.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 	ENST00000539097.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v2_chr1_-_169555779_169555826	0.341161	HMGA1	ENST00000367797.3|F5|ENSG00000198734.6|coagulation factor V (proaccelerin, labile factor) 	ENST00000367796.3|F5|ENSG00000198734.6|coagulation factor V (proaccelerin, labile factor)
hg19_v2_chr1_+_186798073_186798147	0.339906	HMGA1	ENST00000367466.3|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent) 	ENST00000442353.2|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent)
hg19_v2_chr4_+_74301880_74301964	0.33958	HMGA1	ENST00000395792.2|AFP|ENSG00000081051.3|alpha-fetoprotein 	ENST00000226359.2|AFP|ENSG00000081051.3|alpha-fetoprotein
hg19_v2_chr7_-_120498357_120498456	0.337953	HMGA1	ENST00000415871.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000222747.3|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000430985.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chr12_-_10588539_10588600	0.335603	HMGA1	ENST00000381902.2|KLRC2|ENSG00000205809.5|killer cell lectin-like receptor subfamily C, member 2 	ENST00000381901.1|KLRC2|ENSG00000205809.5|killer cell lectin-like receptor subfamily C, member 2 	ENST00000539033.1|NKG2-E|ENSG00000255641.1|Uncharacterized protein
hg19_v2_chr2_+_191792376_191792426	0.328637	HMGA1	ENST00000409428.1|GLS|ENSG00000115419.8|glutaminase 	ENST00000409215.1|GLS|ENSG00000115419.8|glutaminase
hg19_v2_chr1_-_101360331_101360373	0.326454	HMGA1	ENST00000416479.1|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2 	ENST00000370113.3|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2
hg19_v2_chr3_-_196910477_196910524	0.325455	HMGA1	ENST00000447466.1|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila)
hg19_v2_chr17_-_80797886_80797906	0.325171	HMGA1	ENST00000572562.1|ZNF750|ENSG00000141579.6|zinc finger protein 750
hg19_v2_chr13_+_97928395_97928458	0.324564	HMGA1	ENST00000445661.2|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2
hg19_v2_chr12_-_8765446_8765468	0.324426	HMGA1	ENST00000537228.1|AICDA|ENSG00000111732.6|activation-induced cytidine deaminase 	ENST00000229335.6|AICDA|ENSG00000111732.6|activation-induced cytidine deaminase
hg19_v2_chr5_+_118691008_118691149	0.324356	HMGA1	ENST00000504642.1|TNFAIP8|ENSG00000145779.7|tumor necrosis factor, alpha-induced protein 8
hg19_v2_chr2_-_99279928_99279942	0.324234	HMGA1	ENST00000414521.2|MGAT4A|ENSG00000071073.8|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v2_chr8_-_66701319_66701330	0.321935	HMGA1	ENST00000379419.4|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr5_-_75008244_75008286	0.321217	HMGA1	ENST00000510798.1|POC5|ENSG00000152359.10|POC5 centriolar protein 	ENST00000446329.2|POC5|ENSG00000152359.10|POC5 centriolar protein
hg19_v2_chr1_+_156308403_156308693	0.319607	HMGA1	ENST00000481479.1|TSACC|ENSG00000163467.7|TSSK6 activating co-chaperone 	ENST00000368252.1|TSACC|ENSG00000163467.7|TSSK6 activating co-chaperone 	ENST00000466306.1|TSACC|ENSG00000163467.7|TSSK6 activating co-chaperone 	ENST00000368251.1|TSACC|ENSG00000163467.7|TSSK6 activating co-chaperone
hg19_v2_chr4_-_105416039_105416065	0.319037	HMGA1	ENST00000394767.2|CXXC4|ENSG00000168772.9|CXXC finger protein 4
hg19_v2_chr14_+_39736582_39736618	0.318847	HMGA1	ENST00000556148.1|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000348007.3|CTAGE5|ENSG00000150527.12|CTAGE family, member 5
hg19_v2_chr1_-_59165763_59165780	0.318341	HMGA1	ENST00000472487.1|MYSM1|ENSG00000162601.5|Myb-like, SWIRM and MPN domains 1
hg19_v2_chr7_+_141478242_141478242	0.317284	HMGA1	ENST00000247881.2|TAS2R4|ENSG00000127364.2|taste receptor, type 2, member 4
hg19_v2_chr1_+_52082751_52082781	0.317127	HMGA1	ENST00000447887.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000435686.2|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000428468.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000453295.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9
hg19_v2_chr2_+_162016804_162016814	0.312093	HMGA1	ENST00000392749.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000440506.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr6_+_76311568_76311623	0.310664	HMGA1	ENST00000370014.3|SENP6|ENSG00000112701.13|SUMO1/sentrin specific peptidase 6
hg19_v2_chr3_-_121448791_121448809	0.309219	HMGA1	ENST00000489400.1|GOLGB1|ENSG00000173230.11|golgin B1
hg19_v2_chr2_+_86333340_86333372	0.309142	HMGA1	ENST00000409783.2|PTCD3|ENSG00000132300.14|pentatricopeptide repeat domain 3 	ENST00000409277.3|PTCD3|ENSG00000132300.14|pentatricopeptide repeat domain 3
hg19_v2_chr5_+_138678131_138678169	0.308268	HMGA1	ENST00000394795.2|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000510080.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr1_-_89591749_89591816	0.307399	HMGA1	ENST00000370466.3|GBP2|ENSG00000162645.8|guanylate binding protein 2, interferon-inducible
hg19_v2_chr16_+_53412368_53412387	0.306814	HMGA1	ENST00000565189.1|RP11-44F14.2|ENSG00000261804.1|RP11-44F14.2
hg19_v2_chr12_+_110718428_110718561	0.303587	HMGA1	ENST00000552636.1|ATP2A2|ENSG00000174437.12|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
hg19_v2_chr13_+_33160553_33160564	0.303426	HMGA1	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr10_-_21661870_21661885	0.302172	HMGA1	ENST00000433460.1|RP11-275N1.1|ENSG00000230109.1|RP11-275N1.1
hg19_v2_chr13_-_31039375_31039379	0.300707	HMGA1	ENST00000399494.1|HMGB1|ENSG00000189403.10|high mobility group box 1
hg19_v2_chr4_-_143227088_143227105	0.300315	HMGA1	ENST00000511838.1|INPP4B|ENSG00000109452.8|inositol polyphosphate-4-phosphatase, type II, 105kDa
hg19_v2_chr7_-_130080681_130080699	0.299839	HMGA1	ENST00000469826.1|CEP41|ENSG00000106477.14|centrosomal protein 41kDa
hg19_v2_chr3_-_98241713_98241758	0.297542	HMGA1	ENST00000502288.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000512147.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000510541.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000503621.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000511081.1|CLDND1|ENSG00000080822.12|claudin domain containing 1
hg19_v2_chr15_+_80364901_80364932	0.296622	HMGA1	ENST00000560228.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000559835.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000559775.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558688.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000560392.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000560976.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558272.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558390.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6
hg19_v2_chr9_-_123812542_123812560	0.296522	HMGA1	ENST00000223642.1|C5|ENSG00000106804.6|complement component 5
hg19_v2_chr1_-_115124257_115124270	0.296471	HMGA1	ENST00000369541.3|BCAS2|ENSG00000116752.5|breast carcinoma amplified sequence 2
hg19_v2_chr4_-_70725856_70725871	0.284565	HMGA1	ENST00000226444.3|SULT1E1|ENSG00000109193.6|sulfotransferase family 1E, estrogen-preferring, member 1
hg19_v2_chr12_+_14572070_14572164	0.284533	HMGA1	ENST00000545769.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000428217.2|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000396279.2|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000542514.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536279.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr13_+_28813645_28813770	0.284015	HMGA1	ENST00000282391.5|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr3_+_53528659_53528750	0.283403	HMGA1	ENST00000350061.5|CACNA1D|ENSG00000157388.9|calcium channel, voltage-dependent, L type, alpha 1D subunit
hg19_v2_chr2_-_179914760_179914884	0.283293	HMGA1	ENST00000420890.2|CCDC141|ENSG00000163492.9|coiled-coil domain containing 141 	ENST00000409284.1|CCDC141|ENSG00000163492.9|coiled-coil domain containing 141 	ENST00000443758.1|CCDC141|ENSG00000163492.9|coiled-coil domain containing 141 	ENST00000446116.1|CCDC141|ENSG00000163492.9|coiled-coil domain containing 141
hg19_v2_chr11_-_2906979_2907111	0.281764	HMGA1	ENST00000380725.1|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000313407.6|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000430149.2|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000440480.2|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000414822.3|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2)
hg19_v2_chr1_+_81771806_81771876	0.281398	HMGA1	ENST00000370721.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370727.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370725.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370723.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370728.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370730.1|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr3_+_107364769_107364793	0.278724	HMGA1	ENST00000449271.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000425868.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000449213.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr3_+_130648842_130648983	0.277295	HMGA1	ENST00000508297.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr10_-_69597828_69597854	0.276737	HMGA1	ENST00000339758.7|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chrX_-_77150985_77151090	0.276686	HMGA1	ENST00000358075.6|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr3_+_107364683_107364736	0.27567	HMGA1	ENST00000413213.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr5_-_39270725_39270771	0.27237	HMGA1	ENST00000512138.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000512982.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000540520.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr2_+_86333301_86333311	0.271563	HMGA1	ENST00000254630.7|PTCD3|ENSG00000132300.14|pentatricopeptide repeat domain 3
hg19_v2_chr22_-_40929812_40929868	0.270761	HMGA1	ENST00000422851.1|MKL1|ENSG00000196588.10|megakaryoblastic leukemia (translocation) 1
hg19_v2_chr14_-_35182994_35183034	0.270031	HMGA1	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr13_+_108870714_108870780	0.266994	HMGA1	ENST00000375898.3|ABHD13|ENSG00000139826.5|abhydrolase domain containing 13
hg19_v2_chr14_-_82000140_82000229	0.266104	HMGA1	ENST00000555824.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000557372.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000336735.4|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans)
hg19_v2_chr4_+_155484103_155484147	0.265832	HMGA1	ENST00000302068.4|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr6_-_52859046_52859201	0.264914	HMGA1	ENST00000457564.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4 	ENST00000541324.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4 	ENST00000370960.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4
hg19_v2_chr2_-_206950781_206950947	0.2629	HMGA1	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr7_-_112430647_112430776	0.262664	HMGA1	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr14_+_56127960_56127979	0.262359	HMGA1	ENST00000553624.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr8_-_108510224_108510283	0.261663	HMGA1	ENST00000517746.1|ANGPT1|ENSG00000154188.5|angiopoietin 1 	ENST00000297450.3|ANGPT1|ENSG00000154188.5|angiopoietin 1
hg19_v2_chr3_+_137906154_137906192	0.260578	HMGA1	ENST00000466749.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000358441.2|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000489213.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8
hg19_v2_chr14_+_37641012_37641093	0.257781	HMGA1	ENST00000556667.1|SLC25A21-AS1|ENSG00000258708.1|SLC25A21 antisense RNA 1
hg19_v2_chr4_+_40058411_40058557	0.257692	HMGA1	ENST00000261435.6|N4BP2|ENSG00000078177.9|NEDD4 binding protein 2 	ENST00000515550.1|N4BP2|ENSG00000078177.9|NEDD4 binding protein 2
hg19_v2_chr5_+_61874562_61874685	0.257331	HMGA1	ENST00000334994.5|LRRC70|ENSG00000186105.7|leucine rich repeat containing 70 	ENST00000409534.1|IPO11|ENSG00000086200.12|importin 11
hg19_v2_chr2_-_170430366_170430390	0.256481	HMGA1	ENST00000453153.2|FASTKD1|ENSG00000138399.13|FAST kinase domains 1 	ENST00000445210.1|FASTKD1|ENSG00000138399.13|FAST kinase domains 1
hg19_v2_chr2_+_210444748_210444770	0.2559	HMGA1	ENST00000392194.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr14_+_38033252_38033405	0.255443	HMGA1	ENST00000554829.1|RP11-356O9.1|ENSG00000258414.1|RP11-356O9.1
hg19_v2_chr8_+_75262612_75262622	0.251751	HMGA1	ENST00000220822.7|GDAP1|ENSG00000104381.8|ganglioside induced differentiation associated protein 1
hg19_v2_chr17_+_60457914_60457944	0.251428	HMGA1	ENST00000305286.3|EFCAB3|ENSG00000172421.3|EF-hand calcium binding domain 3 	ENST00000520404.1|EFCAB3|ENSG00000172421.3|EF-hand calcium binding domain 3 	ENST00000518576.1|EFCAB3|ENSG00000172421.3|EF-hand calcium binding domain 3
hg19_v2_chr1_+_82165350_82165455	0.2512	HMGA1	ENST00000359929.3|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr14_+_45605127_45605155	0.250991	HMGA1	ENST00000556036.1|FANCM|ENSG00000187790.6|Fanconi anemia, complementation group M 	ENST00000267430.5|FANCM|ENSG00000187790.6|Fanconi anemia, complementation group M
hg19_v2_chr13_-_41240717_41240735	0.25061	HMGA1	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr15_-_38519066_38519111	0.249708	HMGA1	ENST00000561320.1|RP11-346D14.1|ENSG00000259380.1|RP11-346D14.1	ENST00000561161.1|RP11-346D14.1|ENSG00000259380.1|RP11-346D14.1
hg19_v2_chr14_-_31856397_31856489	0.24867	HMGA1	ENST00000538864.2|HEATR5A|ENSG00000129493.10|HEAT repeat containing 5A 	ENST00000550366.1|HEATR5A|ENSG00000129493.10|HEAT repeat containing 5A
hg19_v2_chr14_+_61449076_61449109	0.248035	HMGA1	ENST00000526105.1|SLC38A6|ENSG00000139974.11|solute carrier family 38, member 6
hg19_v2_chr15_-_63448973_63449064	0.247764	HMGA1	ENST00000462430.1|RPS27L|ENSG00000185088.8|ribosomal protein S27-like
hg19_v2_chr6_+_126102292_126102329	0.246797	HMGA1	ENST00000368357.3|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7
hg19_v2_chr1_+_78383813_78383829	0.246179	HMGA1	ENST00000342754.5|NEXN|ENSG00000162614.14|nexilin (F actin binding protein)
hg19_v2_chr3_-_98241598_98241696	0.245565	HMGA1	ENST00000513287.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000514537.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000508071.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000507944.1|CLDND1|ENSG00000080822.12|claudin domain containing 1
hg19_v2_chr2_-_151344172_151344243	0.245349	HMGA1	ENST00000375734.2|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000263895.4|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000454202.1|RND3|ENSG00000115963.9|Rho family GTPase 3
hg19_v2_chr2_-_165424973_165425010	0.244355	HMGA1	ENST00000543549.1|GRB14|ENSG00000115290.5|growth factor receptor-bound protein 14
hg19_v2_chr1_-_220220000_220220019	0.244333	HMGA1	ENST00000366923.3|EPRS|ENSG00000136628.13|glutamyl-prolyl-tRNA synthetase
hg19_v2_chr18_-_67614645_67614674	0.242748	HMGA1	ENST00000577287.1|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr14_+_51026743_51026835	0.242236	HMGA1	ENST00000358385.6|ATL1|ENSG00000198513.7|atlastin GTPase 1 	ENST00000357032.3|ATL1|ENSG00000198513.7|atlastin GTPase 1 	ENST00000354525.4|ATL1|ENSG00000198513.7|atlastin GTPase 1
hg19_v2_chr5_-_135290651_135290678	0.241386	HMGA1	ENST00000522943.1|LECT2|ENSG00000145826.4|leukocyte cell-derived chemotaxin 2 	ENST00000514447.2|LECT2|ENSG00000145826.4|leukocyte cell-derived chemotaxin 2
hg19_v2_chr7_-_140714430_140714493	0.241231	HMGA1	ENST00000393008.3|MRPS33|ENSG00000090263.11|mitochondrial ribosomal protein S33
hg19_v2_chr7_+_77469439_77469497	0.241036	HMGA1	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr3_-_128902729_128902753	0.240725	HMGA1	ENST00000451728.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000446936.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000502976.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000500450.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000441626.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein
hg19_v2_chr17_+_65713925_65713949	0.240546	HMGA1	ENST00000253247.4|NOL11|ENSG00000130935.5|nucleolar protein 11
hg19_v2_chr6_+_76311736_76311763	0.240413	HMGA1	ENST00000447266.2|SENP6|ENSG00000112701.13|SUMO1/sentrin specific peptidase 6
hg19_v2_chr3_-_196910721_196910729	0.239351	HMGA1	ENST00000443183.1|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila)
hg19_v2_chr4_+_95373037_95373104	0.236576	HMGA1	ENST00000359265.4|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5 	ENST00000437932.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5 	ENST00000380180.3|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5 	ENST00000318007.5|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5 	ENST00000450793.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5 	ENST00000538141.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5 	ENST00000317968.4|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5 	ENST00000512274.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5 	ENST00000503974.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5 	ENST00000504489.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5 	ENST00000542407.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5
hg19_v2_chr14_+_24407940_24407940	0.236194	HMGA1	ENST00000354854.1|DHRS4-AS1|ENSG00000197775.1|DHRS4-AS1
hg19_v2_chr18_-_12884150_12884250	0.236137	HMGA1	ENST00000591115.1|PTPN2|ENSG00000175354.14|protein tyrosine phosphatase, non-receptor type 2 	ENST00000309660.5|PTPN2|ENSG00000175354.14|protein tyrosine phosphatase, non-receptor type 2
hg19_v2_chr2_-_136678123_136678165	0.235537	HMGA1	ENST00000422708.1|DARS|ENSG00000115866.6|aspartyl-tRNA synthetase
hg19_v2_chrX_-_107334790_107334848	0.234584	HMGA1	ENST00000217958.3|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
hg19_v2_chr1_-_39347255_39347303	0.234011	HMGA1	ENST00000454994.2|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa 	ENST00000357771.3|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa
hg19_v2_chr5_+_136070614_136070625	0.232456	HMGA1	ENST00000502421.1|CTB-1I21.1|ENSG00000250284.1|CTB-1I21.1
hg19_v2_chr6_+_127898312_127898326	0.232001	HMGA1	ENST00000329722.7|C6orf58|ENSG00000184530.8|chromosome 6 open reading frame 58
hg19_v2_chr3_+_122399444_122399465	0.231981	HMGA1	ENST00000474629.2|PARP14|ENSG00000173193.9|poly (ADP-ribose) polymerase family, member 14
hg19_v2_chr1_+_179851410_179851447	0.231408	HMGA1	ENST00000271583.3|TOR1AIP1|ENSG00000143337.14|torsin A interacting protein 1 	ENST00000606911.2|TOR1AIP1|ENSG00000143337.14|torsin A interacting protein 1
hg19_v2_chr10_-_95462265_95462378	0.230908	HMGA1	ENST00000536233.1|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 	ENST00000359204.4|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 	ENST00000371430.2|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 	ENST00000394100.2|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
hg19_v2_chr14_+_51026844_51026853	0.230899	HMGA1	ENST00000554886.1|ATL1|ENSG00000198513.7|atlastin GTPase 1
hg19_v2_chr6_-_113953705_113953724	0.228812	HMGA1	ENST00000452675.1|RP11-367G18.1|ENSG00000230943.1|RP11-367G18.1
hg19_v2_chr2_-_37544209_37544230	0.227577	HMGA1	ENST00000234179.2|PRKD3|ENSG00000115825.5|protein kinase D3
hg19_v2_chr7_+_23146271_23146285	0.226401	HMGA1	ENST00000545771.1|KLHL7|ENSG00000122550.13|kelch-like family member 7
hg19_v2_chr1_-_196577489_196577592	0.223763	HMGA1	ENST00000609185.1|KCNT2|ENSG00000162687.12|potassium channel, subfamily T, member 2 	ENST00000451324.2|KCNT2|ENSG00000162687.12|potassium channel, subfamily T, member 2 	ENST00000367433.5|KCNT2|ENSG00000162687.12|potassium channel, subfamily T, member 2 	ENST00000367431.4|KCNT2|ENSG00000162687.12|potassium channel, subfamily T, member 2
hg19_v2_chr13_+_49684445_49684517	0.223702	HMGA1	ENST00000398316.3|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr12_-_90024360_90024531	0.222753	HMGA1	ENST00000393164.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr3_+_119298523_119298644	0.222626	HMGA1	ENST00000357003.3|ADPRH|ENSG00000144843.7|ADP-ribosylarginine hydrolase
hg19_v2_chrX_-_11129229_11129273	0.222578	HMGA1	ENST00000608176.1|RP11-120D5.1|ENSG00000234129.3|RP11-120D5.1	ENST00000433747.2|RP11-120D5.1|ENSG00000234129.3|RP11-120D5.1	ENST00000608576.1|RP11-120D5.1|ENSG00000234129.3|RP11-120D5.1	ENST00000608916.1|RP11-120D5.1|ENSG00000234129.3|RP11-120D5.1
hg19_v2_chr7_-_91764108_91764124	0.222413	HMGA1	ENST00000450723.1|CYP51A1|ENSG00000001630.11|cytochrome P450, family 51, subfamily A, polypeptide 1
hg19_v2_chr1_+_87458692_87458765	0.221833	HMGA1	ENST00000370548.2|RP5-1052I5.2|ENSG00000267561.1|Heparan sulfate 2-O-sulfotransferase 1  	ENST00000356813.4|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1
hg19_v2_chr8_-_120845068_120845103	0.220976	HMGA1	ENST00000378164.2|TAF2|ENSG00000064313.7|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa
hg19_v2_chr4_-_74853897_74853917	0.219895	HMGA1	ENST00000296028.3|PPBP|ENSG00000163736.3|pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)
hg19_v2_chrX_-_49121165_49121288	0.21968	HMGA1	ENST00000376207.4|FOXP3|ENSG00000049768.10|forkhead box P3 	ENST00000376199.2|FOXP3|ENSG00000049768.10|forkhead box P3
hg19_v2_chr14_+_58711539_58711627	0.217868	HMGA1	ENST00000216455.4|PSMA3|ENSG00000100567.8|proteasome (prosome, macropain) subunit, alpha type, 3 	ENST00000412908.2|PSMA3|ENSG00000100567.8|proteasome (prosome, macropain) subunit, alpha type, 3 	ENST00000557508.1|PSMA3|ENSG00000100567.8|proteasome (prosome, macropain) subunit, alpha type, 3
hg19_v2_chr13_-_37573432_37573504	0.217862	HMGA1	ENST00000413537.2|ALG5|ENSG00000120697.4|ALG5, dolichyl-phosphate beta-glucosyltransferase 	ENST00000443765.1|ALG5|ENSG00000120697.4|ALG5, dolichyl-phosphate beta-glucosyltransferase 	ENST00000239891.3|ALG5|ENSG00000120697.4|ALG5, dolichyl-phosphate beta-glucosyltransferase
hg19_v2_chr8_+_52730143_52730143	0.217788	HMGA1	ENST00000415643.1|AC090186.1|ENSG00000232941.1|Uncharacterized protein
hg19_v2_chr1_+_215747118_215747138	0.216605	HMGA1	ENST00000448333.1|KCTD3|ENSG00000136636.8|potassium channel tetramerization domain containing 3
hg19_v2_chr18_-_57027194_57027194	0.215986	HMGA1	ENST00000251047.5|LMAN1|ENSG00000074695.5|lectin, mannose-binding, 1
hg19_v2_chr3_-_194188956_194188970	0.215702	HMGA1	ENST00000256031.4|ATP13A3|ENSG00000133657.10|ATPase type 13A3 	ENST00000446356.1|ATP13A3|ENSG00000133657.10|ATPase type 13A3
hg19_v2_chr18_+_34409069_34409203	0.215422	HMGA1	ENST00000543923.1|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000280020.5|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000435985.2|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000592521.1|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000587139.1|KIAA1328|ENSG00000150477.10|KIAA1328
hg19_v2_chr12_+_97306295_97306354	0.215285	HMGA1	ENST00000457368.2|NEDD1|ENSG00000139350.7|neural precursor cell expressed, developmentally down-regulated 1
hg19_v2_chr7_-_16844611_16844704	0.215028	HMGA1	ENST00000401412.1|AGR2|ENSG00000106541.7|anterior gradient 2 	ENST00000419304.2|AGR2|ENSG00000106541.7|anterior gradient 2
hg19_v2_chr5_-_145562147_145562240	0.214584	HMGA1	ENST00000545646.1|LARS|ENSG00000133706.13|leucyl-tRNA synthetase 	ENST00000274562.9|LARS|ENSG00000133706.13|leucyl-tRNA synthetase 	ENST00000510191.1|LARS|ENSG00000133706.13|leucyl-tRNA synthetase 	ENST00000394434.2|LARS|ENSG00000133706.13|leucyl-tRNA synthetase
hg19_v2_chr2_+_190541153_190541177	0.210296	HMGA1	ENST00000313581.4|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000438402.2|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000431575.2|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000281412.6|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing
hg19_v2_chr11_-_8986279_8986320	0.208564	HMGA1	ENST00000534025.1|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B
hg19_v2_chr8_-_50466973_50466973	0.208238	HMGA1	ENST00000520800.1|RP11-738G5.2|ENSG00000253206.1|Uncharacterized protein
hg19_v2_chr21_-_35284635_35284635	0.206583	HMGA1	ENST00000429238.1|AP000304.12|ENSG00000249209.1|AP000304.12
hg19_v2_chr13_-_24007815_24007872	0.20648	HMGA1	ENST00000382298.3|SACS|ENSG00000151835.9|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v2_chr13_+_76378357_76378382	0.205905	HMGA1	ENST00000489941.2|LMO7|ENSG00000136153.15|LIM domain 7 	ENST00000525373.1|LMO7|ENSG00000136153.15|LIM domain 7
hg19_v2_chr15_-_63449663_63449698	0.205865	HMGA1	ENST00000439025.1|RPS27L|ENSG00000185088.8|ribosomal protein S27-like
hg19_v2_chr4_+_55095264_55095390	0.205856	HMGA1	ENST00000257290.5|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chrX_-_24045303_24045303	0.205846	HMGA1	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr17_-_29641104_29641130	0.2053	HMGA1	ENST00000577894.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B 	ENST00000330927.4|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr12_+_2912363_2912428	0.203602	HMGA1	ENST00000544366.1|FKBP4|ENSG00000004478.5|FK506 binding protein 4, 59kDa
hg19_v2_chr1_+_100810575_100810584	0.203184	HMGA1	ENST00000542213.1|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr7_-_99277610_99277626	0.202977	HMGA1	ENST00000343703.5|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5 	ENST00000222982.4|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5 	ENST00000439761.1|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5 	ENST00000339843.2|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5
hg19_v2_chr8_-_17555164_17555204	0.201968	HMGA1	ENST00000297488.6|MTUS1|ENSG00000129422.9|microtubule associated tumor suppressor 1
hg19_v2_chr6_-_64029879_64029891	0.201598	HMGA1	ENST00000370658.5|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain 	ENST00000485906.2|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain 	ENST00000370657.4|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain
hg19_v2_chr5_-_98262240_98262240	0.201101	HMGA1	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr1_+_196743943_196743993	0.200681	HMGA1	ENST00000471440.2|CFHR3|ENSG00000116785.9|complement factor H-related 3 	ENST00000391985.3|CFHR3|ENSG00000116785.9|complement factor H-related 3
hg19_v2_chr12_-_10007448_10007448	0.199659	HMGA1	ENST00000538152.1|CLEC2B|ENSG00000110852.4|C-type lectin domain family 2, member B
hg19_v2_chr8_+_55466915_55466932	0.197976	HMGA1	ENST00000522711.2|RP11-53M11.3|ENSG00000254142.2|RP11-53M11.3
hg19_v2_chr6_-_57087042_57087128	0.197359	HMGA1	ENST00000317483.3|RAB23|ENSG00000112210.7|RAB23, member RAS oncogene family
hg19_v2_chr12_+_32655048_32655108	0.196563	HMGA1	ENST00000427716.2|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4 	ENST00000266482.3|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4
hg19_v2_chr3_-_128902759_128902770	0.196531	HMGA1	ENST00000422453.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000504813.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000512338.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein
hg19_v2_chrX_+_92929192_92929214	0.19632	HMGA1	ENST00000332647.4|FAM133A|ENSG00000179083.5|family with sequence similarity 133, member A
hg19_v2_chr2_+_163175394_163175583	0.195573	HMGA1	ENST00000446271.1|GCA|ENSG00000115271.6|grancalcin, EF-hand calcium binding protein 	ENST00000429691.2|GCA|ENSG00000115271.6|grancalcin, EF-hand calcium binding protein
hg19_v2_chr21_+_35552978_35553030	0.195544	HMGA1	ENST00000428914.2|LINC00310|ENSG00000227456.3|long intergenic non-protein coding RNA 310 	ENST00000609062.1|LINC00310|ENSG00000227456.3|long intergenic non-protein coding RNA 310 	ENST00000609947.1|LINC00310|ENSG00000227456.3|long intergenic non-protein coding RNA 310
hg19_v2_chr17_+_3379284_3379345	0.195378	HMGA1	ENST00000263080.2|ASPA|ENSG00000108381.6|aspartoacylase
hg19_v2_chr18_+_47901408_47901431	0.194861	HMGA1	ENST00000398452.2|SKA1|ENSG00000154839.5|spindle and kinetochore associated complex subunit 1 	ENST00000417656.2|SKA1|ENSG00000154839.5|spindle and kinetochore associated complex subunit 1 	ENST00000488454.1|SKA1|ENSG00000154839.5|spindle and kinetochore associated complex subunit 1 	ENST00000494518.1|SKA1|ENSG00000154839.5|spindle and kinetochore associated complex subunit 1
hg19_v2_chr2_+_58655520_58655570	0.194219	HMGA1	ENST00000455219.3|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122 	ENST00000449448.2|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122
hg19_v2_chrX_+_150565038_150565070	0.194087	HMGA1	ENST00000370361.1|VMA21|ENSG00000160131.9|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
hg19_v2_chr4_-_159094194_159094216	0.193915	HMGA1	ENST00000592057.1|FAM198B|ENSG00000164125.11|family with sequence similarity 198, member B 	ENST00000585682.1|FAM198B|ENSG00000164125.11|family with sequence similarity 198, member B 	ENST00000393807.5|FAM198B|ENSG00000164125.11|family with sequence similarity 198, member B
hg19_v2_chr15_+_57511609_57511664	0.193423	HMGA1	ENST00000543579.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000537840.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000343827.3|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr1_-_213189168_213189219	0.193102	HMGA1	ENST00000366962.3|ANGEL2|ENSG00000174606.8|angel homolog 2 (Drosophila) 	ENST00000360506.2|ANGEL2|ENSG00000174606.8|angel homolog 2 (Drosophila)
hg19_v2_chr17_-_54893250_54893278	0.191626	HMGA1	ENST00000397862.2|C17orf67|ENSG00000214226.4|chromosome 17 open reading frame 67
hg19_v2_chr10_+_35484053_35484076	0.189694	HMGA1	ENST00000487763.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000473940.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000488328.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000356917.5|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr20_+_9494987_9495027	0.188882	HMGA1	ENST00000427562.2|LAMP5|ENSG00000125869.5|lysosomal-associated membrane protein family, member 5 	ENST00000246070.2|LAMP5|ENSG00000125869.5|lysosomal-associated membrane protein family, member 5
hg19_v2_chr17_-_63822563_63822661	0.185772	HMGA1	ENST00000317442.8|CEP112|ENSG00000154240.12|centrosomal protein 112kDa
hg19_v2_chr16_-_90096309_90096309	0.185371	HMGA1	ENST00000408886.2|C16orf3|ENSG00000221819.2|chromosome 16 open reading frame 3
hg19_v2_chr12_-_123756781_123756881	0.185134	HMGA1	ENST00000544658.1|CDK2AP1|ENSG00000111328.2|cyclin-dependent kinase 2 associated protein 1
hg19_v2_chr6_+_3982909_3982909	0.182097	HMGA1	ENST00000356722.3|C6ORF50|ENSG00000145965.5|C6ORF50
hg19_v2_chr7_+_128399002_128399018	0.181952	HMGA1	ENST00000493278.1|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr2_+_42721689_42721723	0.180402	HMGA1	ENST00000405592.1|MTA3|ENSG00000057935.9|metastasis associated 1 family, member 3
hg19_v2_chr5_-_58882219_58882337	0.179979	HMGA1	ENST00000505453.1|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific 	ENST00000360047.5|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr7_-_140714739_140714783	0.179689	HMGA1	ENST00000467334.1|MRPS33|ENSG00000090263.11|mitochondrial ribosomal protein S33 	ENST00000324787.5|MRPS33|ENSG00000090263.11|mitochondrial ribosomal protein S33
hg19_v2_chr6_+_76311636_76311651	0.179162	HMGA1	ENST00000327284.8|SENP6|ENSG00000112701.13|SUMO1/sentrin specific peptidase 6
hg19_v2_chr5_+_179135246_179135327	0.178415	HMGA1	ENST00000508787.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chr18_-_64271363_64271390	0.175392	HMGA1	ENST00000262150.2|CDH19|ENSG00000071991.4|cadherin 19, type 2
hg19_v2_chr7_-_112758665_112758672	0.173781	HMGA1	ENST00000397764.3|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998
hg19_v2_chr1_+_111415757_111415779	0.173261	HMGA1	ENST00000429072.2|CD53|ENSG00000143119.8|CD53 molecule 	ENST00000271324.5|CD53|ENSG00000143119.8|CD53 molecule
hg19_v2_chr11_-_94706705_94706776	0.172559	HMGA1	ENST00000279839.6|CWC15|ENSG00000150316.7|CWC15 spliceosome-associated protein homolog (S. cerevisiae)
hg19_v2_chr7_-_29152509_29152558	0.17197	HMGA1	ENST00000448959.1|CPVL|ENSG00000106066.9|carboxypeptidase, vitellogenic-like
hg19_v2_chr17_-_60142609_60142657	0.171768	HMGA1	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr21_-_35281399_35281399	0.171728	HMGA1	ENST00000418933.1|ATP5O|ENSG00000241837.2|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
hg19_v2_chr12_-_10978957_10978957	0.1707	HMGA1	ENST00000240619.2|TAS2R10|ENSG00000121318.2|taste receptor, type 2, member 10
hg19_v2_chr12_+_41086297_41086354	0.170439	HMGA1	ENST00000551295.2|CNTN1|ENSG00000018236.10|contactin 1
hg19_v2_chr4_-_153274078_153274123	0.170024	HMGA1	ENST00000263981.5|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chr2_-_152146385_152146571	0.169661	HMGA1	ENST00000414946.1|NMI|ENSG00000123609.6|N-myc (and STAT) interactor 	ENST00000243346.5|NMI|ENSG00000123609.6|N-myc (and STAT) interactor
hg19_v2_chr1_+_53480598_53480665	0.169643	HMGA1	ENST00000430330.2|SCP2|ENSG00000116171.12|sterol carrier protein 2 	ENST00000408941.3|SCP2|ENSG00000116171.12|sterol carrier protein 2 	ENST00000478274.2|SCP2|ENSG00000116171.12|sterol carrier protein 2 	ENST00000484100.1|SCP2|ENSG00000116171.12|sterol carrier protein 2 	ENST00000435345.2|SCP2|ENSG00000116171.12|sterol carrier protein 2 	ENST00000488965.1|SCP2|ENSG00000116171.12|sterol carrier protein 2
hg19_v2_chr20_-_14318248_14318264	0.168934	HMGA1	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr1_-_100643765_100643829	0.16871	HMGA1	ENST00000370137.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000370138.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000342895.3|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39
hg19_v2_chr3_-_196911002_196911116	0.167847	HMGA1	ENST00000452595.1|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila)
hg19_v2_chr14_-_22005197_22005261	0.167741	HMGA1	ENST00000541965.1|SALL2|ENSG00000165821.7|spalt-like transcription factor 2
hg19_v2_chr4_+_169013666_169013697	0.167478	HMGA1	ENST00000359299.3|ANXA10|ENSG00000109511.6|annexin A10
hg19_v2_chr2_-_24270217_24270232	0.166468	HMGA1	ENST00000295148.4|C2orf44|ENSG00000163026.7|chromosome 2 open reading frame 44 	ENST00000406895.3|C2orf44|ENSG00000163026.7|chromosome 2 open reading frame 44
hg19_v2_chr4_-_71532668_71532695	0.163188	HMGA1	ENST00000510437.1|IGJ|ENSG00000132465.6|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides
hg19_v2_chr15_+_63682335_63682429	0.162431	HMGA1	ENST00000559379.1|RP11-321G12.1|ENSG00000259459.1|RP11-321G12.1	ENST00000559821.1|RP11-321G12.1|ENSG00000259459.1|RP11-321G12.1
hg19_v2_chr14_+_75988768_75988826	0.161719	HMGA1	ENST00000286639.6|BATF|ENSG00000156127.6|basic leucine zipper transcription factor, ATF-like
hg19_v2_chr7_-_152373216_152373260	0.161604	HMGA1	ENST00000359321.1|XRCC2|ENSG00000196584.2|X-ray repair complementing defective repair in Chinese hamster cells 2
hg19_v2_chr2_+_172544011_172544029	0.159105	HMGA1	ENST00000508530.1|DYNC1I2|ENSG00000077380.11|dynein, cytoplasmic 1, intermediate chain 2
hg19_v2_chr21_+_30673091_30673135	0.159014	HMGA1	ENST00000447177.1|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr8_+_91952750_91952810	0.158544	HMGA1	ENST00000521366.1|NECAB1|ENSG00000123119.7|N-terminal EF-hand calcium binding protein 1
hg19_v2_chr1_-_150669500_150669602	0.15784	HMGA1	ENST00000271732.3|GOLPH3L|ENSG00000143457.6|golgi phosphoprotein 3-like
hg19_v2_chr4_+_110834033_110834047	0.157671	HMGA1	ENST00000509793.1|EGF|ENSG00000138798.7|epidermal growth factor 	ENST00000265171.5|EGF|ENSG00000138798.7|epidermal growth factor
hg19_v2_chr5_-_137071756_137071788	0.157364	HMGA1	ENST00000394937.3|KLHL3|ENSG00000146021.10|kelch-like family member 3 	ENST00000309755.4|KLHL3|ENSG00000146021.10|kelch-like family member 3
hg19_v2_chr5_-_169626104_169626145	0.156168	HMGA1	ENST00000520275.1|CTB-27N1.1|ENSG00000249601.2|CTB-27N1.1	ENST00000506431.2|CTB-27N1.1|ENSG00000249601.2|CTB-27N1.1
hg19_v2_chr5_+_135496675_135496725	0.155803	HMGA1	ENST00000507637.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr10_+_99894380_99894390	0.155318	HMGA1	ENST00000370584.3|R3HCC1L|ENSG00000166024.9|R3H domain and coiled-coil containing 1-like
hg19_v2_chr1_-_227505289_227505415	0.155082	HMGA1	ENST00000366765.3|CDC42BPA|ENSG00000143776.14|CDC42 binding protein kinase alpha (DMPK-like)
hg19_v2_chr4_-_89744365_89744398	0.154668	HMGA1	ENST00000513837.1|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A 	ENST00000503556.1|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr5_+_162930114_162930125	0.154562	HMGA1	ENST00000280969.5|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta
hg19_v2_chr14_-_34420259_34420291	0.1545	HMGA1	ENST00000250457.3|EGLN3|ENSG00000129521.9|egl-9 family hypoxia-inducible factor 3 	ENST00000547327.2|EGLN3|ENSG00000129521.9|egl-9 family hypoxia-inducible factor 3
hg19_v2_chr15_-_55657428_55657474	0.15417	HMGA1	ENST00000568543.1|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr16_-_49890016_49890046	0.153669	HMGA1	ENST00000563137.2|ZNF423|ENSG00000102935.7|zinc finger protein 423
hg19_v2_chr4_+_142557717_142557757	0.151841	HMGA1	ENST00000320650.4|IL15|ENSG00000164136.12|interleukin 15 	ENST00000296545.7|IL15|ENSG00000164136.12|interleukin 15
hg19_v2_chr3_-_50340996_50341051	0.150987	HMGA1	ENST00000266031.4|HYAL1|ENSG00000114378.12|hyaluronoglucosaminidase 1 	ENST00000395143.2|HYAL1|ENSG00000114378.12|hyaluronoglucosaminidase 1 	ENST00000457214.2|HYAL1|ENSG00000114378.12|hyaluronoglucosaminidase 1 	ENST00000447605.2|HYAL1|ENSG00000114378.12|hyaluronoglucosaminidase 1 	ENST00000418723.1|HYAL1|ENSG00000114378.12|hyaluronoglucosaminidase 1 	ENST00000395144.2|HYAL1|ENSG00000114378.12|hyaluronoglucosaminidase 1
hg19_v2_chr1_-_152086556_152086556	0.150861	HMGA1	ENST00000368804.1|TCHH|ENSG00000159450.8|trichohyalin
hg19_v2_chr19_-_57967854_57967854	0.149209	HMGA1	ENST00000321039.3|VN1R1|ENSG00000178201.3|vomeronasal 1 receptor 1
hg19_v2_chr11_+_28129795_28129965	0.148265	HMGA1	ENST00000406787.3|METTL15|ENSG00000169519.15|methyltransferase like 15 	ENST00000342303.5|METTL15|ENSG00000169519.15|methyltransferase like 15 	ENST00000403099.1|METTL15|ENSG00000169519.15|methyltransferase like 15 	ENST00000407364.3|METTL15|ENSG00000169519.15|methyltransferase like 15
hg19_v2_chr3_+_141596371_141596516	0.147553	HMGA1	ENST00000495216.1|ATP1B3|ENSG00000069849.6|ATPase, Na+/K+ transporting, beta 3 polypeptide
hg19_v2_chr1_+_215740709_215740748	0.147117	HMGA1	ENST00000259154.4|KCTD3|ENSG00000136636.8|potassium channel tetramerization domain containing 3
hg19_v2_chr3_-_4927447_4927479	0.147032	HMGA1	ENST00000449914.1|AC018816.3|ENSG00000235978.2|Uncharacterized protein
hg19_v2_chr9_-_16253112_16253112	0.146901	HMGA1	ENST00000380683.1|C9orf92|ENSG00000205549.4|chromosome 9 open reading frame 92
hg19_v2_chr2_-_233641265_233641282	0.146686	HMGA1	ENST00000438786.1|KCNJ13|ENSG00000115474.6|potassium inwardly-rectifying channel, subfamily J, member 13 	ENST00000409779.1|KCNJ13|ENSG00000115474.6|potassium inwardly-rectifying channel, subfamily J, member 13 	ENST00000233826.3|KCNJ13|ENSG00000115474.6|potassium inwardly-rectifying channel, subfamily J, member 13
hg19_v2_chr12_-_71551652_71551679	0.146526	HMGA1	ENST00000546561.1|TSPAN8|ENSG00000127324.4|tetraspanin 8
hg19_v2_chr4_+_109571800_109571811	0.145571	HMGA1	ENST00000512478.2|OSTC|ENSG00000198856.8|oligosaccharyltransferase complex subunit (non-catalytic)
hg19_v2_chr17_-_64225508_64225539	0.145566	HMGA1	ENST00000205948.6|APOH|ENSG00000091583.6|apolipoprotein H (beta-2-glycoprotein I)
hg19_v2_chr14_-_73997901_73997916	0.145176	HMGA1	ENST00000557603.1|HEATR4|ENSG00000187105.4|HEAT repeat containing 4 	ENST00000556455.1|HEATR4|ENSG00000187105.4|HEAT repeat containing 4
hg19_v2_chr10_-_38265517_38265591	0.145087	HMGA1	ENST00000302609.7|ZNF25|ENSG00000175395.11|zinc finger protein 25
hg19_v2_chr9_+_97562440_97562463	0.144623	HMGA1	ENST00000395357.2|C9orf3|ENSG00000148120.10|chromosome 9 open reading frame 3
hg19_v2_chr3_+_107243204_107243223	0.144184	HMGA1	ENST00000456817.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000458458.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr4_-_89744314_89744361	0.144133	HMGA1	ENST00000508369.1|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr3_+_141103634_141103665	0.142316	HMGA1	ENST00000507722.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr9_+_104161123_104161310	0.141852	HMGA1	ENST00000374861.3|ZNF189|ENSG00000136870.6|zinc finger protein 189 	ENST00000339664.2|ZNF189|ENSG00000136870.6|zinc finger protein 189 	ENST00000259395.4|ZNF189|ENSG00000136870.6|zinc finger protein 189
hg19_v2_chr19_+_33865218_33865254	0.140836	HMGA1	ENST00000585933.2|CEBPG|ENSG00000153879.4|CCAAT/enhancer binding protein (C/EBP), gamma
hg19_v2_chr5_+_118812237_118812251	0.140711	HMGA1	ENST00000513628.1|HSD17B4|ENSG00000133835.10|hydroxysteroid (17-beta) dehydrogenase 4
hg19_v2_chr6_+_24777040_24777094	0.138478	HMGA1	ENST00000378059.3|GMNN|ENSG00000112312.5|geminin, DNA replication inhibitor
hg19_v2_chr2_+_135596180_135596193	0.138311	HMGA1	ENST00000283054.4|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase 	ENST00000392928.1|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase
hg19_v2_chr4_-_71532207_71532244	0.138113	HMGA1	ENST00000543780.1|IGJ|ENSG00000132465.6|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides 	ENST00000391614.3|IGJ|ENSG00000132465.6|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides
hg19_v2_chrX_-_107334750_107334780	0.136976	HMGA1	ENST00000340200.5|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENST00000372296.1|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENST00000372295.1|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENST00000361815.5|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
hg19_v2_chr3_-_33686925_33687000	0.13579	HMGA1	ENST00000485378.2|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000313350.6|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000487200.1|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr9_+_75766652_75766673	0.1343	HMGA1	ENST00000257497.6|ANXA1|ENSG00000135046.9|annexin A1
hg19_v2_chr20_-_55100981_55100981	0.133409	HMGA1	ENST00000243913.4|GCNT7|ENSG00000124091.5|glucosaminyl (N-acetyl) transferase family member 7
hg19_v2_chr1_-_101360205_101360231	0.131395	HMGA1	ENST00000450240.1|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2
hg19_v2_chr4_+_26344754_26344772	0.131287	HMGA1	ENST00000515573.1|RBPJ|ENSG00000168214.16|recombination signal binding protein for immunoglobulin kappa J region
hg19_v2_chr17_-_57229155_57229198	0.130084	HMGA1	ENST00000584089.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chrX_-_19988382_19988416	0.129501	HMGA1	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr4_-_113207048_113207076	0.128209	HMGA1	ENST00000361717.3|TIFA|ENSG00000145365.10|TRAF-interacting protein with forkhead-associated domain
hg19_v2_chr4_-_39979576_39979588	0.128203	HMGA1	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chr15_+_52155001_52155035	0.127737	HMGA1	ENST00000544199.1|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous)
hg19_v2_chr15_+_49462434_49462488	0.127069	HMGA1	ENST00000558145.1|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000543495.1|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000544523.1|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000560138.1|GALK2|ENSG00000156958.10|galactokinase 2
hg19_v2_chrX_-_44402231_44402259	0.126922	HMGA1	ENST00000378045.4|FUNDC1|ENSG00000069509.5|FUN14 domain containing 1
hg19_v2_chr7_+_116660246_116660336	0.125167	HMGA1	ENST00000434836.1|ST7|ENSG00000004866.14|suppression of tumorigenicity 7 	ENST00000393443.1|ST7|ENSG00000004866.14|suppression of tumorigenicity 7 	ENST00000465133.1|ST7|ENSG00000004866.14|suppression of tumorigenicity 7 	ENST00000477742.1|ST7|ENSG00000004866.14|suppression of tumorigenicity 7 	ENST00000393447.4|ST7|ENSG00000004866.14|suppression of tumorigenicity 7 	ENST00000393444.3|ST7|ENSG00000004866.14|suppression of tumorigenicity 7
hg19_v2_chrX_+_11777671_11777795	0.123866	HMGA1	ENST00000380693.3|MSL3|ENSG00000005302.13|male-specific lethal 3 homolog (Drosophila) 	ENST00000380692.2|MSL3|ENSG00000005302.13|male-specific lethal 3 homolog (Drosophila)
hg19_v2_chr14_+_85994943_85994943	0.123105	HMGA1	ENST00000553678.1|RP11-497E19.2|ENSG00000258945.1|Uncharacterized protein
hg19_v2_chr19_+_41509851_41509988	0.122688	HMGA1	ENST00000593831.1|CYP2B6|ENSG00000197408.4|cytochrome P450, family 2, subfamily B, polypeptide 6 	ENST00000330446.5|CYP2B6|ENSG00000197408.4|cytochrome P450, family 2, subfamily B, polypeptide 6
hg19_v2_chr10_-_134599556_134599653	0.122572	HMGA1	ENST00000368592.5|NKX6-2|ENSG00000148826.6|NK6 homeobox 2
hg19_v2_chr19_-_10333842_10333870	0.121526	HMGA1	ENST00000317726.4|CTD-2369P2.2|ENSG00000175898.4|CTD-2369P2.2
hg19_v2_chr9_-_15472730_15472753	0.121429	HMGA1	ENST00000481862.1|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1
hg19_v2_chr4_+_96012585_96012612	0.121378	HMGA1	ENST00000502683.1|BMPR1B|ENSG00000138696.6|bone morphogenetic protein receptor, type IB
hg19_v2_chr2_+_65663812_65663864	0.121187	HMGA1	ENST00000606978.1|AC074391.1|ENSG00000204929.7|AC074391.1	ENST00000377977.3|AC074391.1|ENSG00000204929.7|AC074391.1	ENST00000536804.1|AC074391.1|ENSG00000204929.7|AC074391.1
hg19_v2_chr21_-_37914898_37914918	0.120389	HMGA1	ENST00000399136.1|CLDN14|ENSG00000159261.6|claudin 14
hg19_v2_chr11_+_7559485_7559520	0.120284	HMGA1	ENST00000527790.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chr6_-_116381918_116381977	0.120265	HMGA1	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr14_+_96949319_96949444	0.120005	HMGA1	ENST00000554706.1|AK7|ENSG00000140057.4|adenylate kinase 7
hg19_v2_chr12_+_19389814_19389872	0.119645	HMGA1	ENST00000536974.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5
hg19_v2_chr7_+_135242652_135242689	0.119242	HMGA1	ENST00000285968.6|NUP205|ENSG00000155561.10|nucleoporin 205kDa 	ENST00000440390.2|NUP205|ENSG00000155561.10|nucleoporin 205kDa
hg19_v2_chrX_-_80457385_80457441	0.118924	HMGA1	ENST00000451455.1|HMGN5|ENSG00000198157.6|high mobility group nucleosome binding domain 5 	ENST00000436386.1|HMGN5|ENSG00000198157.6|high mobility group nucleosome binding domain 5 	ENST00000358130.2|HMGN5|ENSG00000198157.6|high mobility group nucleosome binding domain 5
hg19_v2_chr7_-_112758589_112758619	0.117951	HMGA1	ENST00000413744.1|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998 	ENST00000439551.1|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998 	ENST00000441359.1|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998
hg19_v2_chr3_+_160559931_160560015	0.117904	HMGA1	ENST00000464260.1|PPM1L|ENSG00000163590.9|protein phosphatase, Mg2+/Mn2+ dependent, 1L 	ENST00000295839.9|PPM1L|ENSG00000163590.9|protein phosphatase, Mg2+/Mn2+ dependent, 1L
hg19_v2_chr5_+_140180635_140180783	0.117849	HMGA1	ENST00000522353.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3 	ENST00000532566.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3
hg19_v2_chr1_-_169555709_169555730	0.117222	HMGA1	ENST00000546081.1|F5|ENSG00000198734.6|coagulation factor V (proaccelerin, labile factor)
hg19_v2_chr4_-_85771168_85771168	0.117158	HMGA1	ENST00000514071.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3
hg19_v2_chr13_+_96085847_96085864	0.117035	HMGA1	ENST00000376873.3|CLDN10|ENSG00000134873.5|claudin 10
hg19_v2_chr3_-_124653579_124653601	0.117007	HMGA1	ENST00000478191.1|MUC13|ENSG00000173702.3|mucin 13, cell surface associated 	ENST00000311075.3|MUC13|ENSG00000173702.3|mucin 13, cell surface associated
hg19_v2_chr14_+_62462541_62462541	0.116877	HMGA1	ENST00000430451.2|SYT16|ENSG00000139973.11|synaptotagmin XVI
hg19_v2_chr2_+_86116396_86116411	0.113947	HMGA1	ENST00000455121.3|AC105053.4|ENSG00000232504.4|AC105053.4
hg19_v2_chr15_-_94614049_94614115	0.113224	HMGA1	ENST00000556447.1|CTD-3049M7.1|ENSG00000258754.3|CTD-3049M7.1	ENST00000555772.1|CTD-3049M7.1|ENSG00000258754.3|CTD-3049M7.1
hg19_v2_chr5_-_43557791_43557860	0.112834	HMGA1	ENST00000338972.4|PAIP1|ENSG00000172239.9|poly(A) binding protein interacting protein 1 	ENST00000511321.1|PAIP1|ENSG00000172239.9|poly(A) binding protein interacting protein 1 	ENST00000515338.1|PAIP1|ENSG00000172239.9|poly(A) binding protein interacting protein 1
hg19_v2_chr5_+_118812294_118812324	0.111082	HMGA1	ENST00000509514.1|HSD17B4|ENSG00000133835.10|hydroxysteroid (17-beta) dehydrogenase 4
hg19_v2_chr6_-_151773232_151773298	0.11065	HMGA1	ENST00000444024.1|RMND1|ENSG00000155906.12|required for meiotic nuclear division 1 homolog (S. cerevisiae) 	ENST00000367303.4|RMND1|ENSG00000155906.12|required for meiotic nuclear division 1 homolog (S. cerevisiae)
hg19_v2_chrX_-_10544942_10544995	0.110223	HMGA1	ENST00000380779.1|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome)
hg19_v2_chr17_+_61151306_61151320	0.109822	HMGA1	ENST00000580068.1|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000580466.1|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr19_+_9361606_9361606	0.109186	HMGA1	ENST00000456448.1|OR7E24|ENSG00000237521.1|olfactory receptor, family 7, subfamily E, member 24
hg19_v2_chr14_-_75536182_75536224	0.108778	HMGA1	ENST00000555463.1|ACYP1|ENSG00000119640.4|acylphosphatase 1, erythrocyte (common) type
hg19_v2_chr18_-_70305745_70305761	0.107704	HMGA1	ENST00000581073.1|CBLN2|ENSG00000141668.5|cerebellin 2 precursor
hg19_v2_chr1_-_33116128_33116185	0.107674	HMGA1	ENST00000436661.1|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand 	ENST00000373501.2|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand 	ENST00000341885.5|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand 	ENST00000468695.1|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand
hg19_v2_chr11_+_12766583_12766592	0.107472	HMGA1	ENST00000361985.2|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chrX_-_117119243_117119297	0.107471	HMGA1	ENST00000539496.1|KLHL13|ENSG00000003096.9|kelch-like family member 13 	ENST00000469946.1|KLHL13|ENSG00000003096.9|kelch-like family member 13
hg19_v2_chr3_+_73110810_73110810	0.107337	HMGA1	ENST00000533473.1|EBLN2|ENSG00000255423.1|endogenous Bornavirus-like nucleoprotein 2
hg19_v2_chr9_+_125273081_125273081	0.107063	HMGA1	ENST00000335302.5|OR1J2|ENSG00000197233.7|olfactory receptor, family 1, subfamily J, member 2
hg19_v2_chr10_+_114709999_114710031	0.106206	HMGA1	ENST00000355995.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000545257.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000543371.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000536810.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000355717.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000538897.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000534894.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr10_-_99030395_99030434	0.106108	HMGA1	ENST00000355366.5|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000371027.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr12_+_110940005_110940100	0.104266	HMGA1	ENST00000409246.1|RAD9B|ENSG00000151164.14|RAD9 homolog B (S. pombe) 	ENST00000392672.4|RAD9B|ENSG00000151164.14|RAD9 homolog B (S. pombe) 	ENST00000409300.1|RAD9B|ENSG00000151164.14|RAD9 homolog B (S. pombe) 	ENST00000409425.1|RAD9B|ENSG00000151164.14|RAD9 homolog B (S. pombe)
hg19_v2_chr8_-_122653630_122653661	0.103973	HMGA1	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chrX_-_10645773_10645795	0.10366	HMGA1	ENST00000453318.2|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome)
hg19_v2_chr4_+_144312659_144312668	0.102564	HMGA1	ENST00000509992.1|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr5_-_131347583_131347870	0.102523	HMGA1	ENST00000379255.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000430403.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000544770.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000379246.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000414078.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000441995.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6
hg19_v2_chr12_+_14518598_14518663	0.102399	HMGA1	ENST00000261168.4|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000538511.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000545723.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000543189.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536444.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr3_+_189349162_189349305	0.100922	HMGA1	ENST00000264731.3|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000382063.4|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000418709.2|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000320472.5|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000392460.3|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000440651.2|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr3_-_52713729_52713784	0.100903	HMGA1	ENST00000296302.7|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000356770.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000337303.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409057.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000410007.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409114.3|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409767.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000423351.1|PBRM1|ENSG00000163939.14|polybromo 1
hg19_v2_chr7_+_150549565_150549614	0.100271	HMGA1	ENST00000360937.4|AOC1|ENSG00000002726.15|amine oxidase, copper containing 1 	ENST00000416793.2|AOC1|ENSG00000002726.15|amine oxidase, copper containing 1 	ENST00000483043.1|AOC1|ENSG00000002726.15|amine oxidase, copper containing 1
hg19_v2_chr6_-_117747015_117747048	0.0995672	HMGA1	ENST00000368508.3|ROS1|ENSG00000047936.6|c-ros oncogene 1 , receptor tyrosine kinase 	ENST00000368507.3|ROS1|ENSG00000047936.6|c-ros oncogene 1 , receptor tyrosine kinase
hg19_v2_chr5_+_68513557_68513616	0.0960373	HMGA1	ENST00000256441.4|MRPS36|ENSG00000134056.7|mitochondrial ribosomal protein S36
hg19_v2_chr2_+_172543919_172543949	0.0948362	HMGA1	ENST00000452242.1|DYNC1I2|ENSG00000077380.11|dynein, cytoplasmic 1, intermediate chain 2 	ENST00000340296.4|DYNC1I2|ENSG00000077380.11|dynein, cytoplasmic 1, intermediate chain 2
hg19_v2_chr7_+_30174426_30174441	0.0939867	HMGA1	ENST00000324453.8|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr3_+_141106643_141106681	0.0928086	HMGA1	ENST00000514251.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr18_+_13825543_13825543	0.0922533	HMGA1	ENST00000324750.3|MC5R|ENSG00000176136.4|melanocortin 5 receptor
hg19_v2_chr17_-_39222131_39222131	0.0917014	HMGA1	ENST00000394015.2|KRTAP2-4|ENSG00000213417.2|keratin associated protein 2-4
hg19_v2_chr12_-_118796971_118796986	0.0913967	HMGA1	ENST00000542902.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr4_-_89744457_89744512	0.0910211	HMGA1	ENST00000395002.2|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chrX_-_102941596_102941746	0.0909568	HMGA1	ENST00000441076.2|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000422355.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000442614.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000422154.2|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000451301.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2
hg19_v2_chr5_-_107703556_107703655	0.0908599	HMGA1	ENST00000496714.1|FBXL17|ENSG00000145743.11|F-box and leucine-rich repeat protein 17
hg19_v2_chr7_+_29186174_29186188	0.0906462	HMGA1	ENST00000439384.1|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chr3_+_102153859_102153877	0.0904011	HMGA1	ENST00000306176.1|ZPLD1|ENSG00000170044.4|zona pellucida-like domain containing 1 	ENST00000466937.1|ZPLD1|ENSG00000170044.4|zona pellucida-like domain containing 1
hg19_v2_chr14_+_89029866_89029945	0.0901826	HMGA1	ENST00000557693.1|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14 	ENST00000555120.1|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14
hg19_v2_chr2_+_173600565_173600592	0.089208	HMGA1	ENST00000397081.3|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr5_-_75919253_75919269	0.0891175	HMGA1	ENST00000296641.4|F2RL2|ENSG00000164220.6|coagulation factor II (thrombin) receptor-like 2
hg19_v2_chr10_+_51572408_51572454	0.0889207	HMGA1	ENST00000374082.1|NCOA4|ENSG00000138293.15|nuclear receptor coactivator 4
hg19_v2_chr6_+_26158343_26158374	0.0883323	HMGA1	ENST00000377777.4|HIST1H2BD|ENSG00000158373.7|histone cluster 1, H2bd 	ENST00000289316.2|HIST1H2BD|ENSG00000158373.7|histone cluster 1, H2bd
hg19_v2_chr4_+_79567314_79567348	0.0881373	HMGA1	ENST00000503539.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094 	ENST00000504675.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094
hg19_v2_chr14_-_88789581_88789603	0.0877677	HMGA1	ENST00000319231.5|KCNK10|ENSG00000100433.11|potassium channel, subfamily K, member 10
hg19_v2_chr16_-_15180257_15180257	0.0875596	HMGA1	ENST00000540462.1|RRN3|ENSG00000085721.8|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
hg19_v2_chr5_-_130970723_130970965	0.0873646	HMGA1	ENST00000308008.6|RAPGEF6|ENSG00000158987.15|Rap guanine nucleotide exchange factor (GEF) 6 	ENST00000296859.6|RAPGEF6|ENSG00000158987.15|Rap guanine nucleotide exchange factor (GEF) 6 	ENST00000507093.1|RAPGEF6|ENSG00000158987.15|Rap guanine nucleotide exchange factor (GEF) 6 	ENST00000510071.1|RAPGEF6|ENSG00000158987.15|Rap guanine nucleotide exchange factor (GEF) 6 	ENST00000509018.1|RAPGEF6|ENSG00000158987.15|Rap guanine nucleotide exchange factor (GEF) 6 	ENST00000307984.5|RAPGEF6|ENSG00000158987.15|Rap guanine nucleotide exchange factor (GEF) 6
hg19_v2_chr17_-_6915646_6915673	0.0872161	HMGA1	ENST00000574377.1|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000399541.2|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000399540.2|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000575727.1|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000573939.1|AC027763.2|ENSG00000215067.5|Uncharacterized protein
hg19_v2_chrX_-_135962876_135962896	0.0871279	HMGA1	ENST00000431446.3|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000570135.1|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000320676.7|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000562646.1|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked
hg19_v2_chr2_+_170683942_170683972	0.0870245	HMGA1	ENST00000272793.5|UBR3|ENSG00000144357.12|ubiquitin protein ligase E3 component n-recognin 3 (putative)
hg19_v2_chr2_+_234545092_234545100	0.0865773	HMGA1	ENST00000344644.5|UGT1A10|ENSG00000242515.1|UDP glucuronosyltransferase 1 family, polypeptide A10
hg19_v2_chr12_+_8849773_8849912	0.0863839	HMGA1	ENST00000541044.1|RIMKLB|ENSG00000166532.11|ribosomal modification protein rimK-like family member B
hg19_v2_chr6_-_110011704_110011713	0.0863563	HMGA1	ENST00000448084.2|AK9|ENSG00000155085.11|adenylate kinase 9
hg19_v2_chr17_-_53800217_53800231	0.085641	HMGA1	ENST00000424486.2|TMEM100|ENSG00000166292.7|transmembrane protein 100
hg19_v2_chr12_+_32655110_32655158	0.0852356	HMGA1	ENST00000546442.1|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4 	ENST00000583694.1|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4
hg19_v2_chr4_-_48683188_48683232	0.0848722	HMGA1	ENST00000505759.1|FRYL|ENSG00000075539.9|FRY-like
hg19_v2_chr9_+_75766763_75766818	0.0836563	HMGA1	ENST00000456643.1|ANXA1|ENSG00000135046.9|annexin A1 	ENST00000415424.1|ANXA1|ENSG00000135046.9|annexin A1
hg19_v2_chr10_+_126630692_126630692	0.0824136	HMGA1	ENST00000359653.4|ZRANB1|ENSG00000019995.6|zinc finger, RAN-binding domain containing 1
hg19_v2_chr13_-_45010939_45011033	0.0818953	HMGA1	ENST00000261489.2|TSC22D1|ENSG00000102804.10|TSC22 domain family, member 1
hg19_v2_chr1_+_161736072_161736093	0.0818161	HMGA1	ENST00000367942.3|ATF6|ENSG00000118217.5|activating transcription factor 6
hg19_v2_chr4_+_160025300_160025330	0.0811593	HMGA1	ENST00000505478.1|RAPGEF2|ENSG00000109756.4|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr14_+_90722839_90722877	0.0802387	HMGA1	ENST00000261303.8|PSMC1|ENSG00000100764.9|proteasome (prosome, macropain) 26S subunit, ATPase, 1 	ENST00000553835.1|PSMC1|ENSG00000100764.9|proteasome (prosome, macropain) 26S subunit, ATPase, 1
hg19_v2_chr21_-_28215332_28215347	0.0793274	HMGA1	ENST00000517777.1|ADAMTS1|ENSG00000154734.10|ADAM metallopeptidase with thrombospondin type 1 motif, 1
hg19_v2_chr2_+_136343820_136343897	0.0791481	HMGA1	ENST00000410054.1|R3HDM1|ENSG00000048991.12|R3H domain containing 1
hg19_v2_chr20_-_49253425_49253427	0.0788873	HMGA1	ENST00000045083.2|FAM65C|ENSG00000042062.7|family with sequence similarity 65, member C
hg19_v2_chr11_-_35440579_35440617	0.078881	HMGA1	ENST00000606205.1|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr2_+_179318295_179318295	0.0787945	HMGA1	ENST00000442710.1|DFNB59|ENSG00000204311.7|deafness, autosomal recessive 59
hg19_v2_chr7_+_93535866_93535906	0.0787558	HMGA1	ENST00000429473.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 	ENST00000430875.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 	ENST00000428834.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v2_chr4_-_74088800_74088844	0.0784098	HMGA1	ENST00000509867.2|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17
hg19_v2_chr2_+_196313239_196313256	0.0776243	HMGA1	ENST00000413290.1|AC064834.1|ENSG00000224099.1|AC064834.1
hg19_v2_chr8_-_124037890_124038018	0.0763448	HMGA1	ENST00000519018.1|DERL1|ENSG00000136986.5|derlin 1 	ENST00000523036.1|DERL1|ENSG00000136986.5|derlin 1
hg19_v2_chr1_+_47603109_47603127	0.0762814	HMGA1	ENST00000371890.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22 	ENST00000294337.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22 	ENST00000371891.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22
hg19_v2_chr10_-_69597915_69597926	0.0761888	HMGA1	ENST00000225171.2|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr4_-_170897045_170897084	0.0760263	HMGA1	ENST00000508313.1|RP11-205M3.3|ENSG00000248319.1|RP11-205M3.3
hg19_v2_chr4_+_159131596_159131623	0.0759025	HMGA1	ENST00000512481.1|TMEM144|ENSG00000164124.6|transmembrane protein 144
hg19_v2_chr14_+_20215587_20215587	0.0756107	HMGA1	ENST00000331723.1|OR4Q3|ENSG00000182652.1|olfactory receptor, family 4, subfamily Q, member 3
hg19_v2_chr3_-_123710199_123710199	0.07532	HMGA1	ENST00000184183.4|ROPN1|ENSG00000065371.13|rhophilin associated tail protein 1
hg19_v2_chr1_+_104615595_104615645	0.0751236	HMGA1	ENST00000418362.1|RP11-364B6.1|ENSG00000215869.3|RP11-364B6.1
hg19_v2_chr10_-_63995871_63996022	0.0746791	HMGA1	ENST00000315289.2|RTKN2|ENSG00000182010.6|rhotekin 2
hg19_v2_chr2_+_58655461_58655492	0.0741471	HMGA1	ENST00000429095.1|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122 	ENST00000429664.1|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122 	ENST00000452840.1|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122
hg19_v2_chr1_+_84630645_84630652	0.0740945	HMGA1	ENST00000394839.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr6_-_133055815_133055834	0.0734793	HMGA1	ENST00000509351.1|VNN3|ENSG00000093134.9|vanin 3 	ENST00000417437.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000414302.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000423615.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000427187.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000275223.3|VNN3|ENSG00000093134.9|vanin 3 	ENST00000519686.2|VNN3|ENSG00000093134.9|vanin 3
hg19_v2_chr7_+_5920429_5920429	0.0705319	HMGA1	ENST00000242104.5|OCM|ENSG00000122543.6|oncomodulin
hg19_v2_chr1_+_204839959_204839996	0.0701743	HMGA1	ENST00000404076.1|NFASC|ENSG00000163531.11|neurofascin
hg19_v2_chr4_+_74269956_74270025	0.0696486	HMGA1	ENST00000295897.4|ALB|ENSG00000163631.12|albumin 	ENST00000415165.2|ALB|ENSG00000163631.12|albumin 	ENST00000503124.1|ALB|ENSG00000163631.12|albumin 	ENST00000509063.1|ALB|ENSG00000163631.12|albumin 	ENST00000401494.3|ALB|ENSG00000163631.12|albumin
hg19_v2_chr14_+_39703112_39703135	0.0693061	HMGA1	ENST00000555143.1|MIA2|ENSG00000150526.7|melanoma inhibitory activity 2 	ENST00000280082.3|MIA2|ENSG00000150526.7|melanoma inhibitory activity 2
hg19_v2_chr4_-_143226979_143226990	0.0691335	HMGA1	ENST00000514525.1|INPP4B|ENSG00000109452.8|inositol polyphosphate-4-phosphatase, type II, 105kDa
hg19_v2_chr9_-_95298314_95298340	0.069073	HMGA1	ENST00000344604.5|ECM2|ENSG00000106823.8|extracellular matrix protein 2, female organ and adipocyte specific 	ENST00000375540.1|ECM2|ENSG00000106823.8|extracellular matrix protein 2, female organ and adipocyte specific
hg19_v2_chr18_+_47901365_47901404	0.0690049	HMGA1	ENST00000285116.3|SKA1|ENSG00000154839.5|spindle and kinetochore associated complex subunit 1
hg19_v2_chrX_-_19983260_19983260	0.0688936	HMGA1	ENST00000340625.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr9_-_104500862_104500940	0.0684115	HMGA1	ENST00000361820.3|GRIN3A|ENSG00000198785.4|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
hg19_v2_chr4_-_144940477_144940541	0.0682107	HMGA1	ENST00000513128.1|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000429670.2|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000502664.1|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group)
hg19_v2_chr2_+_182850743_182850754	0.0681082	HMGA1	ENST00000409702.1|PPP1R1C|ENSG00000150722.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C
hg19_v2_chr8_-_49834299_49834446	0.0678393	HMGA1	ENST00000396822.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr16_+_53483983_53483994	0.0677126	HMGA1	ENST00000544545.1|RBL2|ENSG00000103479.10|retinoblastoma-like 2 (p130)
hg19_v2_chr12_+_510742_510782	0.0667734	HMGA1	ENST00000239830.4|CCDC77|ENSG00000120647.5|coiled-coil domain containing 77
hg19_v2_chr2_+_173600514_173600564	0.0666308	HMGA1	ENST00000264111.6|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr3_+_148508845_148508889	0.0662679	HMGA1	ENST00000491148.1|CPB1|ENSG00000153002.7|carboxypeptidase B1 (tissue)
hg19_v2_chr12_-_10573149_10573194	0.0658491	HMGA1	ENST00000381904.2|KLRC3|ENSG00000205810.4|killer cell lectin-like receptor subfamily C, member 3 	ENST00000381903.2|KLRC3|ENSG00000205810.4|killer cell lectin-like receptor subfamily C, member 3 	ENST00000396439.2|KLRC3|ENSG00000205810.4|killer cell lectin-like receptor subfamily C, member 3
hg19_v2_chr10_-_14050522_14050584	0.0649801	HMGA1	ENST00000342409.2|FRMD4A|ENSG00000151474.15|FERM domain containing 4A
hg19_v2_chr6_+_143447322_143447387	0.0649298	HMGA1	ENST00000458219.1|AIG1|ENSG00000146416.12|androgen-induced 1
hg19_v2_chr14_+_89060739_89060745	0.064741	HMGA1	ENST00000318308.6|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14
hg19_v2_chr3_+_111697843_111697908	0.0643781	HMGA1	ENST00000534857.1|ABHD10|ENSG00000144827.4|abhydrolase domain containing 10 	ENST00000273359.3|ABHD10|ENSG00000144827.4|abhydrolase domain containing 10 	ENST00000494817.1|ABHD10|ENSG00000144827.4|abhydrolase domain containing 10
hg19_v2_chr11_+_89867681_89867697	0.0641973	HMGA1	ENST00000534061.1|NAALAD2|ENSG00000077616.6|N-acetylated alpha-linked acidic dipeptidase 2
hg19_v2_chr6_+_155538093_155538109	0.063114	HMGA1	ENST00000462408.2|TIAM2|ENSG00000146426.13|T-cell lymphoma invasion and metastasis 2
hg19_v2_chr2_+_149447783_149447783	0.0630718	HMGA1	ENST00000449013.1|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila)
hg19_v2_chr5_-_131347501_131347522	0.0629291	HMGA1	ENST00000543479.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6
hg19_v2_chr18_-_53255766_53255860	0.0627465	HMGA1	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr4_-_185139062_185139114	0.0625253	HMGA1	ENST00000296741.2|ENPP6|ENSG00000164303.6|ectonucleotide pyrophosphatase/phosphodiesterase 6
hg19_v2_chr2_+_210517895_210518021	0.0618133	HMGA1	ENST00000447185.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr7_-_97619508_97619508	0.0614718	HMGA1	ENST00000257627.4|OCM2|ENSG00000135175.5|oncomodulin 2
hg19_v2_chr5_-_176433565_176433576	0.0611502	HMGA1	ENST00000428382.2|UIMC1|ENSG00000087206.12|ubiquitin interaction motif containing 1
hg19_v2_chr4_-_175204765_175204843	0.0596432	HMGA1	ENST00000513696.1|FBXO8|ENSG00000164117.8|F-box protein 8 	ENST00000503293.1|FBXO8|ENSG00000164117.8|F-box protein 8
hg19_v2_chr11_-_5537920_5537935	0.0596252	HMGA1	ENST00000380184.1|UBQLNL|ENSG00000175518.6|ubiquilin-like
hg19_v2_chr14_+_90722886_90722922	0.0589924	HMGA1	ENST00000543772.2|PSMC1|ENSG00000100764.9|proteasome (prosome, macropain) 26S subunit, ATPase, 1
hg19_v2_chr16_+_12059091_12059207	0.0589833	HMGA1	ENST00000562385.1|TNFRSF17|ENSG00000048462.6|tumor necrosis factor receptor superfamily, member 17
hg19_v2_chr6_-_76072719_76072770	0.058916	HMGA1	ENST00000370020.1|FILIP1|ENSG00000118407.10|filamin A interacting protein 1
hg19_v2_chr6_+_13182751_13182804	0.0582364	HMGA1	ENST00000415087.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr3_-_138739768_138739768	0.0579428	HMGA1	ENST00000329447.5|PRR23B|ENSG00000184814.5|proline rich 23B
hg19_v2_chr2_+_210444142_210444194	0.0577327	HMGA1	ENST00000360351.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2 	ENST00000361559.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr14_+_102276132_102276178	0.0573223	HMGA1	ENST00000350249.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557621.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556946.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr6_-_26108355_26108371	0.0571389	HMGA1	ENST00000338379.4|HIST1H1T|ENSG00000187475.4|histone cluster 1, H1t
hg19_v2_chr2_+_17721920_17721933	0.0569271	HMGA1	ENST00000295156.4|VSNL1|ENSG00000163032.7|visinin-like 1
hg19_v2_chr5_+_68462944_68463008	0.0568603	HMGA1	ENST00000506572.1|CCNB1|ENSG00000134057.10|cyclin B1
hg19_v2_chr5_+_34757309_34757417	0.0561554	HMGA1	ENST00000397449.1|RAI14|ENSG00000039560.9|retinoic acid induced 14
hg19_v2_chr2_+_202098203_202098256	0.0559792	HMGA1	ENST00000450491.1|CASP8|ENSG00000064012.17|caspase 8, apoptosis-related cysteine peptidase 	ENST00000440732.1|CASP8|ENSG00000064012.17|caspase 8, apoptosis-related cysteine peptidase 	ENST00000392258.3|CASP8|ENSG00000064012.17|caspase 8, apoptosis-related cysteine peptidase
hg19_v2_chr3_+_164924769_164924801	0.0556129	HMGA1	ENST00000494915.1|RP11-85M11.2|ENSG00000244128.1|RP11-85M11.2
hg19_v2_chr19_-_58446721_58446779	0.0550231	HMGA1	ENST00000396147.1|ZNF418|ENSG00000196724.8|zinc finger protein 418 	ENST00000595569.1|ZNF418|ENSG00000196724.8|zinc finger protein 418 	ENST00000599852.1|ZNF418|ENSG00000196724.8|zinc finger protein 418 	ENST00000425570.3|ZNF418|ENSG00000196724.8|zinc finger protein 418 	ENST00000601593.1|ZNF418|ENSG00000196724.8|zinc finger protein 418
hg19_v2_chr3_-_33686743_33686807	0.0541352	HMGA1	ENST00000333778.6|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000539981.1|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr9_-_215744_215893	0.0533318	HMGA1	ENST00000382387.2|C9orf66|ENSG00000183784.5|chromosome 9 open reading frame 66
hg19_v2_chr1_+_152881014_152881031	0.0526976	HMGA1	ENST00000368764.3|IVL|ENSG00000163207.5|involucrin 	ENST00000392667.2|IVL|ENSG00000163207.5|involucrin
hg19_v2_chr14_-_90085458_90085557	0.0523483	HMGA1	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr10_-_116444371_116444414	0.0523343	HMGA1	ENST00000533213.2|ABLIM1|ENSG00000099204.14|actin binding LIM protein 1 	ENST00000369252.4|ABLIM1|ENSG00000099204.14|actin binding LIM protein 1
hg19_v2_chrX_-_16881144_16881188	0.0522709	HMGA1	ENST00000416035.1|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7
hg19_v2_chr14_-_104408645_104408645	0.0521819	HMGA1	ENST00000557640.1|RD3L|ENSG00000227729.2|retinal degeneration 3-like
hg19_v2_chr6_-_113754604_113754624	0.0517087	HMGA1	ENST00000421737.1|RP1-124C6.1|ENSG00000232316.1|RP1-124C6.1
hg19_v2_chr15_-_28419569_28419569	0.0514927	HMGA1	ENST00000569772.1|HERC2|ENSG00000128731.11|HECT and RLD domain containing E3 ubiquitin protein ligase 2
hg19_v2_chr3_+_69811858_69811881	0.0514824	HMGA1	ENST00000433517.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr7_-_80548493_80548524	0.0513635	HMGA1	ENST00000536800.1|SEMA3C|ENSG00000075223.9|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
hg19_v2_chr8_+_132952112_132952148	0.0513239	HMGA1	ENST00000520362.1|EFR3A|ENSG00000132294.9|EFR3 homolog A (S. cerevisiae) 	ENST00000519656.1|EFR3A|ENSG00000132294.9|EFR3 homolog A (S. cerevisiae)
hg19_v2_chr4_-_71532339_71532377	0.0511747	HMGA1	ENST00000254801.4|IGJ|ENSG00000132465.6|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides
hg19_v2_chr7_-_104909435_104909535	0.0509743	HMGA1	ENST00000357311.3|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr1_-_179112173_179112179	0.0509231	HMGA1	ENST00000408940.3|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase 	ENST00000504405.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chrX_-_13835461_13835483	0.0504779	HMGA1	ENST00000316715.4|GPM6B|ENSG00000046653.10|glycoprotein M6B 	ENST00000356942.5|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr3_+_69812877_69812962	0.0504626	HMGA1	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr1_-_179112189_179112224	0.0503242	HMGA1	ENST00000512653.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase 	ENST00000344730.3|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chr12_+_59989791_59989874	0.0498029	HMGA1	ENST00000552432.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr2_-_40680578_40680690	0.0497789	HMGA1	ENST00000455476.1|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr6_-_33864684_33864698	0.0496199	HMGA1	ENST00000506222.2|LINC01016|ENSG00000249346.2|long intergenic non-protein coding RNA 1016 	ENST00000533304.1|LINC01016|ENSG00000249346.2|long intergenic non-protein coding RNA 1016
hg19_v2_chr9_-_117853297_117853426	0.0490234	HMGA1	ENST00000542877.1|TNC|ENSG00000041982.10|tenascin C 	ENST00000537320.1|TNC|ENSG00000041982.10|tenascin C 	ENST00000341037.4|TNC|ENSG00000041982.10|tenascin C
hg19_v2_chr1_+_196743912_196743925	0.0483963	HMGA1	ENST00000367425.4|CFHR3|ENSG00000116785.9|complement factor H-related 3
hg19_v2_chr4_-_87028478_87028514	0.0480758	HMGA1	ENST00000515400.1|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395157.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr4_+_159131630_159131647	0.0477248	HMGA1	ENST00000504569.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000509278.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000514558.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000503200.1|TMEM144|ENSG00000164124.6|transmembrane protein 144
hg19_v2_chr14_-_107114267_107114277	0.0474629	HMGA1	ENST00000454421.2|IGHV3-64|ENSG00000223648.2|immunoglobulin heavy variable 3-64
hg19_v2_chr2_+_210518057_210518117	0.0472306	HMGA1	ENST00000452717.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr11_-_2162468_2162497	0.0470611	HMGA1	ENST00000434045.2|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A)
hg19_v2_chr15_+_67841330_67841348	0.0470492	HMGA1	ENST00000354498.5|MAP2K5|ENSG00000137764.15|mitogen-activated protein kinase kinase 5
hg19_v2_chr18_-_47792851_47792911	0.0468078	HMGA1	ENST00000398545.4|CCDC11|ENSG00000172361.5|coiled-coil domain containing 11
hg19_v2_chr5_-_151304337_151304405	0.046805	HMGA1	ENST00000455880.2|GLRA1|ENSG00000145888.6|glycine receptor, alpha 1 	ENST00000545569.1|GLRA1|ENSG00000145888.6|glycine receptor, alpha 1 	ENST00000274576.4|GLRA1|ENSG00000145888.6|glycine receptor, alpha 1
hg19_v2_chr7_-_144533074_144533153	0.0465277	HMGA1	ENST00000360057.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1 	ENST00000378099.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1
hg19_v2_chr12_-_87232644_87232666	0.0464643	HMGA1	ENST00000549405.2|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr8_-_62559366_62559437	0.0460772	HMGA1	ENST00000522919.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase
hg19_v2_chr3_+_138340049_138340056	0.0458484	HMGA1	ENST00000464668.1|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule
hg19_v2_chr11_+_69924397_69924449	0.0455872	HMGA1	ENST00000355303.5|ANO1|ENSG00000131620.13|anoctamin 1, calcium activated chloride channel
hg19_v2_chr2_+_166430619_166430741	0.0454644	HMGA1	ENST00000409420.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chr17_-_29641084_29641103	0.0449536	HMGA1	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr18_+_32558208_32558340	0.0447806	HMGA1	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr17_+_45608430_45608490	0.044683	HMGA1	ENST00000322157.4|NPEPPS|ENSG00000141279.11|aminopeptidase puromycin sensitive
hg19_v2_chr7_-_140482926_140482957	0.0445886	HMGA1	ENST00000496384.2|BRAF|ENSG00000157764.8|v-raf murine sarcoma viral oncogene homolog B
hg19_v2_chr12_-_118796910_118796943	0.0444634	HMGA1	ENST00000541186.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000539872.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr8_-_101733794_101733925	0.0436961	HMGA1	ENST00000523555.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr2_-_227050079_227050093	0.0432367	HMGA1	ENST00000423838.1|AC068138.1|ENSG00000235070.3|AC068138.1
hg19_v2_chr17_+_68071458_68071481	0.0426435	HMGA1	ENST00000589377.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr6_-_138833630_138833677	0.041485	HMGA1	ENST00000533765.1|NHSL1|ENSG00000135540.7|NHS-like 1
hg19_v2_chr1_+_180601139_180601180	0.0411069	HMGA1	ENST00000367590.4|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1 	ENST00000367589.3|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1
hg19_v2_chr14_-_89878369_89878496	0.0410905	HMGA1	ENST00000553840.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000556916.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr8_+_96037255_96037318	0.0410498	HMGA1	ENST00000286687.4|NDUFAF6|ENSG00000156170.8|NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
hg19_v2_chr17_+_29664830_29664844	0.0409868	HMGA1	ENST00000444181.2|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000417592.2|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr5_-_147211190_147211219	0.0408751	HMGA1	ENST00000510027.2|SPINK1|ENSG00000164266.6|serine peptidase inhibitor, Kazal type 1
hg19_v2_chr18_+_21032781_21032795	0.0406316	HMGA1	ENST00000339486.3|RIOK3|ENSG00000101782.10|RIO kinase 3
hg19_v2_chr5_+_61874696_61874702	0.040528	HMGA1	ENST00000491184.2|LRRC70|ENSG00000186105.7|leucine rich repeat containing 70
hg19_v2_chrX_-_92928557_92928613	0.0403979	HMGA1	ENST00000373079.3|NAP1L3|ENSG00000186310.9|nucleosome assembly protein 1-like 3 	ENST00000475430.2|NAP1L3|ENSG00000186310.9|nucleosome assembly protein 1-like 3
hg19_v2_chr15_+_34638066_34638129	0.039301	HMGA1	ENST00000333756.4|NUTM1|ENSG00000184507.11|NUT midline carcinoma, family member 1
hg19_v2_chr11_-_57519253_57519253	0.0390538	HMGA1	ENST00000422652.1|BTBD18|ENSG00000233436.3|BTB (POZ) domain containing 18 	ENST00000527995.1|BTBD18|ENSG00000233436.3|BTB (POZ) domain containing 18
hg19_v2_chr11_+_100784231_100784231	0.038456	HMGA1	ENST00000531183.1|ARHGAP42|ENSG00000165895.13|Rho GTPase activating protein 42
hg19_v2_chr11_+_4615037_4615037	0.0380542	HMGA1	ENST00000450052.2|OR52I1|ENSG00000232268.4|olfactory receptor, family 52, subfamily I, member 1
hg19_v2_chr9_+_108463234_108463265	0.0379298	HMGA1	ENST00000374688.1|TMEM38B|ENSG00000095209.7|transmembrane protein 38B
hg19_v2_chr3_-_18480260_18480269	0.0378368	HMGA1	ENST00000454909.2|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr11_+_73498898_73498965	0.0376399	HMGA1	ENST00000535529.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000497094.2|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000411840.2|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000535277.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000398483.3|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000542303.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48
hg19_v2_chr3_-_156878540_156878560	0.0373677	HMGA1	ENST00000461804.1|CCNL1|ENSG00000163660.7|cyclin L1
hg19_v2_chr11_+_33278811_33279133	0.0346864	HMGA1	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr4_+_71384257_71384295	0.0342984	HMGA1	ENST00000339336.4|AMTN|ENSG00000187689.5|amelotin
hg19_v2_chr7_-_99381884_99381915	0.0341276	HMGA1	ENST00000336411.2|CYP3A4|ENSG00000160868.10|cytochrome P450, family 3, subfamily A, polypeptide 4
hg19_v2_chr14_-_53331239_53331316	0.0338793	HMGA1	ENST00000553663.1|FERMT2|ENSG00000073712.9|fermitin family member 2
hg19_v2_chr5_+_173763250_173763498	0.0336437	HMGA1	ENST00000515513.1|RP11-267A15.1|ENSG00000249306.1|RP11-267A15.1	ENST00000507361.1|RP11-267A15.1|ENSG00000249306.1|RP11-267A15.1	ENST00000510234.1|RP11-267A15.1|ENSG00000249306.1|RP11-267A15.1
hg19_v2_chr4_-_177162822_177162845	0.0315193	HMGA1	ENST00000512254.1|ASB5|ENSG00000164122.4|ankyrin repeat and SOCS box containing 5
hg19_v2_chr9_-_132586378_132586433	0.0312765	HMGA1	ENST00000351698.4|TOR1A|ENSG00000136827.11|torsin family 1, member A (torsin A)
hg19_v2_chr2_-_175712479_175712503	0.030994	HMGA1	ENST00000443238.1|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr15_-_51535208_51535261	0.0304395	HMGA1	ENST00000405913.3|CYP19A1|ENSG00000137869.9|cytochrome P450, family 19, subfamily A, polypeptide 1 	ENST00000559878.1|CYP19A1|ENSG00000137869.9|cytochrome P450, family 19, subfamily A, polypeptide 1
hg19_v2_chr2_+_157330081_157330104	0.0296704	HMGA1	ENST00000409674.1|GPD2|ENSG00000115159.11|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg19_v2_chr1_+_225600404_225600404	0.0296162	HMGA1	ENST00000366845.2|AC092811.1|ENSG00000203691.2|AC092811.1
hg19_v2_chr4_+_95972822_95972844	0.0294315	HMGA1	ENST00000509540.1|BMPR1B|ENSG00000138696.6|bone morphogenetic protein receptor, type IB 	ENST00000440890.2|BMPR1B|ENSG00000138696.6|bone morphogenetic protein receptor, type IB
hg19_v2_chr13_-_37679803_37679803	0.0293575	HMGA1	ENST00000379800.3|CSNK1A1L|ENSG00000180138.6|casein kinase 1, alpha 1-like
hg19_v2_chr1_+_101185290_101185320	0.0288961	HMGA1	ENST00000370119.4|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1 	ENST00000347652.2|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1 	ENST00000294728.2|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1 	ENST00000370115.1|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1
hg19_v2_chr9_+_103340354_103340367	0.0281626	HMGA1	ENST00000307584.5|MURC|ENSG00000170681.6|muscle-related coiled-coil protein
hg19_v2_chr14_-_21737610_21737653	0.0279594	HMGA1	ENST00000320084.7|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000449098.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000336053.6|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2)
hg19_v2_chr6_+_125304502_125304517	0.0277338	HMGA1	ENST00000519799.1|RNF217|ENSG00000146373.12|ring finger protein 217 	ENST00000368414.2|RNF217|ENSG00000146373.12|ring finger protein 217 	ENST00000359704.2|RNF217|ENSG00000146373.12|ring finger protein 217
hg19_v2_chrX_-_132095419_132095426	0.0276133	HMGA1	ENST00000370836.2|HS6ST2|ENSG00000171004.13|heparan sulfate 6-O-sulfotransferase 2 	ENST00000521489.1|HS6ST2|ENSG00000171004.13|heparan sulfate 6-O-sulfotransferase 2
hg19_v2_chr1_-_150738261_150738433	0.0273374	HMGA1	ENST00000448301.2|CTSS|ENSG00000163131.6|cathepsin S 	ENST00000368985.3|CTSS|ENSG00000163131.6|cathepsin S
hg19_v2_chr5_+_140762268_140762467	0.0269919	HMGA1	ENST00000518325.1|PCDHGA7|ENSG00000253537.1|protocadherin gamma subfamily A, 7
hg19_v2_chr10_-_69597810_69597827	0.0267501	HMGA1	ENST00000483798.2|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr19_-_13617247_13617319	0.0265985	HMGA1	ENST00000573710.2|CACNA1A|ENSG00000141837.14|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
hg19_v2_chr13_+_23755054_23755092	0.0264537	HMGA1	ENST00000218867.3|SGCG|ENSG00000102683.6|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)
hg19_v2_chr3_+_124303539_124303669	0.0264204	HMGA1	ENST00000428018.2|KALRN|ENSG00000160145.11|kalirin, RhoGEF kinase
hg19_v2_chr12_+_54447637_54447661	0.0260775	HMGA1	ENST00000609810.1|HOXC4|ENSG00000198353.6|homeobox C4 	ENST00000430889.2|HOXC4|ENSG00000273266.1|Homeobox protein Hox-C4
hg19_v2_chr3_+_57875738_57875802	0.0260399	HMGA1	ENST00000417128.1|SLMAP|ENSG00000163681.10|sarcolemma associated protein 	ENST00000438794.1|SLMAP|ENSG00000163681.10|sarcolemma associated protein
hg19_v2_chr3_+_62936098_62936146	0.0257066	HMGA1	ENST00000475886.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000465684.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000465262.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000468072.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698
hg19_v2_chr6_-_139613269_139613280	0.0255462	HMGA1	ENST00000358430.3|TXLNB|ENSG00000164440.10|taxilin beta
hg19_v2_chr9_-_71869642_71869642	0.0254541	HMGA1	ENST00000600472.1|AL358113.1|ENSG00000269295.1|Tight junction protein 2 (Zona occludens 2) isoform 1 variant; Uncharacterized protein
hg19_v2_chr3_-_155011483_155011564	0.0251929	HMGA1	ENST00000489090.1|RP11-451G4.2|ENSG00000240045.1|RP11-451G4.2
hg19_v2_chr7_+_116654958_116655009	0.0245204	HMGA1	ENST00000449366.1|ST7|ENSG00000004866.14|suppression of tumorigenicity 7
hg19_v2_chr6_+_116575329_116575390	0.02426	HMGA1	ENST00000430252.2|DSE|ENSG00000111817.12|dermatan sulfate epimerase 	ENST00000540275.1|DSE|ENSG00000111817.12|dermatan sulfate epimerase 	ENST00000448740.2|RP3-486I3.7|ENSG00000237021.2|RP3-486I3.7
hg19_v2_chr12_-_92539614_92539673	0.0237974	HMGA1	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chr9_-_3489428_3489437	0.0232776	HMGA1	ENST00000451859.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chrX_-_30871004_30871004	0.0228291	HMGA1	ENST00000378928.1|TAB3|ENSG00000157625.11|TGF-beta activated kinase 1/MAP3K7 binding protein 3
hg19_v2_chr15_+_81225699_81225767	0.0221212	HMGA1	ENST00000560027.1|KIAA1199|ENSG00000103888.11|KIAA1199
hg19_v2_chr12_-_15103621_15103648	0.0221082	HMGA1	ENST00000536592.1|ARHGDIB|ENSG00000111348.4|Rho GDP dissociation inhibitor (GDI) beta
hg19_v2_chr16_-_18887627_18887627	0.0212412	HMGA1	ENST00000563235.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr18_-_53068782_53068902	0.0212336	HMGA1	ENST00000569012.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr2_-_204398141_204398180	0.0209848	HMGA1	ENST00000428637.1|RAPH1|ENSG00000173166.13|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
hg19_v2_chr18_-_53068940_53068951	0.020922	HMGA1	ENST00000562638.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr6_-_46293378_46293415	0.0206752	HMGA1	ENST00000330430.6|RCAN2|ENSG00000172348.10|regulator of calcineurin 2
hg19_v2_chrX_-_50386648_50386697	0.0202934	HMGA1	ENST00000460112.3|SHROOM4|ENSG00000158352.11|shroom family member 4
hg19_v2_chr6_-_53530474_53530508	0.0202506	HMGA1	ENST00000370905.3|KLHL31|ENSG00000124743.5|kelch-like family member 31
hg19_v2_chr13_+_113633620_113633695	0.0199126	HMGA1	ENST00000421756.1|MCF2L|ENSG00000126217.16|MCF.2 cell line derived transforming sequence-like 	ENST00000375601.3|MCF2L|ENSG00000126217.16|MCF.2 cell line derived transforming sequence-like
hg19_v2_chr16_+_56225248_56225307	0.0195242	HMGA1	ENST00000262493.6|GNAO1|ENSG00000087258.9|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O
hg19_v2_chr14_-_31926595_31926618	0.0191578	HMGA1	ENST00000547378.1|RP11-176H8.1|ENSG00000203546.3|Uncharacterized protein
hg19_v2_chr2_-_222436988_222437031	0.018747	HMGA1	ENST00000409854.1|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000281821.2|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000392071.4|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000443796.1|EPHA4|ENSG00000116106.7|EPH receptor A4
hg19_v2_chr19_+_30433110_30433214	0.0179577	HMGA1	ENST00000542441.2|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone 	ENST00000392271.1|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone
hg19_v2_chr12_-_51402984_51403042	0.0179222	HMGA1	ENST00000545993.2|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
hg19_v2_chr7_+_18535346_18535399	0.017677	HMGA1	ENST00000405010.3|HDAC9|ENSG00000048052.17|histone deacetylase 9 	ENST00000406451.4|HDAC9|ENSG00000048052.17|histone deacetylase 9 	ENST00000428307.2|HDAC9|ENSG00000048052.17|histone deacetylase 9
hg19_v2_chr15_+_49462397_49462430	0.0156476	HMGA1	ENST00000396509.2|GALK2|ENSG00000156958.10|galactokinase 2
hg19_v2_chr9_-_21142144_21142144	0.0149042	HMGA1	ENST00000380229.2|IFNW1|ENSG00000177047.5|interferon, omega 1
hg19_v2_chr7_+_106505696_106505798	0.014537	HMGA1	ENST00000440650.2|PIK3CG|ENSG00000105851.6|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma 	ENST00000496166.1|PIK3CG|ENSG00000105851.6|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma 	ENST00000473541.1|PIK3CG|ENSG00000105851.6|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma
hg19_v2_chr1_+_209602771_209602908	0.0137121	HMGA1	ENST00000440276.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding)
hg19_v2_chr8_-_18666360_18666410	0.0136732	HMGA1	ENST00000286485.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr3_+_125687987_125688057	0.0133067	HMGA1	ENST00000514116.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B 	ENST00000251776.4|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B 	ENST00000504401.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B 	ENST00000513830.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B 	ENST00000508088.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B
hg19_v2_chr10_+_114710211_114710229	0.0122613	HMGA1	ENST00000349937.2|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000369397.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr7_+_20687017_20687045	0.0119534	HMGA1	ENST00000258738.6|ABCB5|ENSG00000004846.12|ATP-binding cassette, sub-family B (MDR/TAP), member 5
hg19_v2_chr3_-_57326704_57326721	0.0114345	HMGA1	ENST00000487349.1|ASB14|ENSG00000239388.4|ankyrin repeat and SOCS box containing 14 	ENST00000389601.3|ASB14|ENSG00000239388.4|ankyrin repeat and SOCS box containing 14
hg19_v2_chr1_+_205538165_205538193	0.0110271	HMGA1	ENST00000536357.1|MFSD4|ENSG00000174514.8|major facilitator superfamily domain containing 4
hg19_v2_chr14_+_20811766_20811801	0.0108386	HMGA1	ENST00000250416.5|PARP2|ENSG00000129484.9|poly (ADP-ribose) polymerase 2 	ENST00000527915.1|PARP2|ENSG00000129484.9|poly (ADP-ribose) polymerase 2
hg19_v2_chr2_+_109204909_109204928	0.01063	HMGA1	ENST00000393310.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr15_+_34261089_34261089	0.0105662	HMGA1	ENST00000383263.5|CHRM5|ENSG00000184984.8|cholinergic receptor, muscarinic 5
hg19_v2_chr3_-_99595037_99595051	0.0104274	HMGA1	ENST00000383694.2|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like
hg19_v2_chr7_+_29186192_29186222	0.0102785	HMGA1	ENST00000539406.1|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chr7_+_115862858_115863015	0.0102775	HMGA1	ENST00000393481.2|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains)
hg19_v2_chr7_+_90338712_90338907	0.0102326	HMGA1	ENST00000265741.3|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14 	ENST00000406263.1|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr5_+_122424816_122424944	0.00995124	HMGA1	ENST00000407847.4|PRDM6|ENSG00000061455.10|PR domain containing 6
hg19_v2_chr10_+_35484793_35484937	0.00911082	HMGA1	ENST00000488741.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000474931.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000468236.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000344351.5|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000490511.1|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr18_-_53068911_53068935	0.00829302	HMGA1	ENST00000537856.3|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr2_-_190448118_190448135	0.00809656	HMGA1	ENST00000440626.1|SLC40A1|ENSG00000138449.6|solute carrier family 40 (iron-regulated transporter), member 1
hg19_v2_chr10_-_31146615_31146708	0.00801347	HMGA1	ENST00000444692.2|ZNF438|ENSG00000183621.11|zinc finger protein 438
hg19_v2_chr19_-_14911023_14911023	0.00741214	HMGA1	ENST00000248073.2|OR7C1|ENSG00000127530.2|olfactory receptor, family 7, subfamily C, member 1
hg19_v2_chr10_-_62149433_62149488	0.0071997	HMGA1	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr12_+_110940111_110940142	0.00599693	HMGA1	ENST00000409778.3|RAD9B|ENSG00000151164.14|RAD9 homolog B (S. pombe)
hg19_v2_chr7_+_90339169_90339182	0.00559678	HMGA1	ENST00000436577.2|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr5_-_59481406_59481425	0.00542949	HMGA1	ENST00000546160.1|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr21_-_33975547_33975601	0.0049978	HMGA1	ENST00000431599.1|C21orf59|ENSG00000159079.14|chromosome 21 open reading frame 59
hg19_v2_chr12_-_21928515_21928544	0.00487615	HMGA1	ENST00000537950.1|KCNJ8|ENSG00000121361.3|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v2_chr2_-_219906220_219906250	0.00448353	HMGA1	ENST00000458526.1|CCDC108|ENSG00000181378.9|coiled-coil domain containing 108 	ENST00000409865.3|CCDC108|ENSG00000181378.9|coiled-coil domain containing 108 	ENST00000410037.1|CCDC108|ENSG00000181378.9|coiled-coil domain containing 108 	ENST00000457968.1|CCDC108|ENSG00000181378.9|coiled-coil domain containing 108 	ENST00000436631.1|CCDC108|ENSG00000181378.9|coiled-coil domain containing 108 	ENST00000341552.5|CCDC108|ENSG00000181378.9|coiled-coil domain containing 108 	ENST00000441968.1|CCDC108|ENSG00000181378.9|coiled-coil domain containing 108 	ENST00000295729.2|CCDC108|ENSG00000181378.9|coiled-coil domain containing 108
hg19_v2_chr7_-_111428957_111429080	0.00439984	HMGA1	ENST00000417165.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr10_+_115469134_115469144	0.00429575	HMGA1	ENST00000452490.2|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase
hg19_v2_chr4_-_88450244_88450287	0.00421486	HMGA1	ENST00000503414.1|SPARCL1|ENSG00000152583.8|SPARC-like 1 (hevin)
hg19_v2_chr14_-_80782219_80782250	0.00376731	HMGA1	ENST00000553594.1|DIO2|ENSG00000211448.7|deiodinase, iodothyronine, type II
hg19_v2_chr3_+_136676851_136676864	0.00336416	HMGA1	ENST00000309741.5|IL20RB|ENSG00000174564.8|interleukin 20 receptor beta
hg19_v2_chr12_+_56435637_56435745	0.00328762	HMGA1	ENST00000356464.5|RPS26|ENSG00000197728.5|ribosomal protein S26 	ENST00000552361.1|RPS26|ENSG00000197728.5|ribosomal protein S26
hg19_v2_chr2_-_69870747_69870812	0.00312982	HMGA1	ENST00000409068.1|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr17_+_45608614_45608693	0.00304682	HMGA1	ENST00000544660.1|NPEPPS|ENSG00000141279.11|aminopeptidase puromycin sensitive
hg19_v2_chr9_-_23826298_23826344	0.0030438	HMGA1	ENST00000380117.1|ELAVL2|ENSG00000107105.10|ELAV like neuron-specific RNA binding protein 2
hg19_v2_chr1_+_150980889_150980965	0.00286704	HMGA1	ENST00000450884.1|PRUNE|ENSG00000143363.11|prune exopolyphosphatase 	ENST00000271620.3|PRUNE|ENSG00000143363.11|prune exopolyphosphatase 	ENST00000271619.8|PRUNE|ENSG00000143363.11|prune exopolyphosphatase 	ENST00000368937.1|PRUNE|ENSG00000143363.11|prune exopolyphosphatase 	ENST00000431193.1|PRUNE|ENSG00000143363.11|prune exopolyphosphatase 	ENST00000368936.1|PRUNE|ENSG00000143363.11|prune exopolyphosphatase
hg19_v2_chrX_+_107334895_107334934	0.0021537	HMGA1	ENST00000372232.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase 	ENST00000345734.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase 	ENST00000372254.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase
hg19_v2_chr4_+_142557771_142557879	0.00185525	HMGA1	ENST00000514653.1|IL15|ENSG00000164136.12|interleukin 15
hg19_v2_chr7_+_141418962_141418962	0.00169045	HMGA1	ENST00000493845.1|WEE2|ENSG00000214102.3|WEE1 homolog 2 (S. pombe)
hg19_v2_chr1_-_160253998_160254043	0.000610638	HMGA1	ENST00000392220.2|PEX19|ENSG00000162735.14|peroxisomal biogenesis factor 19
hg19_v2_chr3_-_157221357_157221365	0.00052989	HMGA1	ENST00000494677.1|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1
