hg19_v2_chr8_+_48920960_48921011	0.182022	GUAACAG	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr2_+_46926048_46926095	0.17865	GUAACAG	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr12_-_29534074_29534127	0.16035	GUAACAG	ENST00000546839.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000360150.4|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552155.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000550353.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000548441.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552132.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2
hg19_v2_chr15_+_44719394_44719579	0.149447	GUAACAG	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr7_+_77166592_77166653	0.148799	GUAACAG	ENST00000248594.6|PTPN12|ENSG00000127947.11|protein tyrosine phosphatase, non-receptor type 12
hg19_v2_chr17_-_73179046_73179078	0.148379	GUAACAG	ENST00000314523.7|SUMO2|ENSG00000188612.7|small ubiquitin-like modifier 2 	ENST00000420826.2|SUMO2|ENSG00000188612.7|small ubiquitin-like modifier 2
hg19_v2_chr5_+_138678131_138678169	0.146244	GUAACAG	ENST00000394795.2|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000510080.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr16_+_69599861_69599887	0.136623	GUAACAG	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr11_+_95523621_95523710	0.133311	GUAACAG	ENST00000325542.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000325486.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000544522.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000541365.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr3_+_197476621_197476721	0.129331	GUAACAG	ENST00000241502.4|FYTTD1|ENSG00000122068.8|forty-two-three domain containing 1
hg19_v2_chr14_-_57735528_57735726	0.118115	GUAACAG	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr5_-_59189545_59189625	0.110789	GUAACAG	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr19_+_34919257_34919332	0.108965	GUAACAG	ENST00000246548.4|UBA2|ENSG00000126261.8|ubiquitin-like modifier activating enzyme 2 	ENST00000590048.2|UBA2|ENSG00000126261.8|ubiquitin-like modifier activating enzyme 2
hg19_v2_chr3_+_93781728_93781760	0.106076	GUAACAG	ENST00000314622.4|NSUN3|ENSG00000178694.5|NOP2/Sun domain family, member 3
hg19_v2_chr18_+_9913977_9914088	0.104541	GUAACAG	ENST00000400000.2|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 	ENST00000340541.4|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
hg19_v2_chr4_-_76912070_76912118	0.104497	GUAACAG	ENST00000395711.4|SDAD1|ENSG00000198301.7|SDA1 domain containing 1 	ENST00000356260.5|SDAD1|ENSG00000198301.7|SDA1 domain containing 1
hg19_v2_chr3_-_149688896_149688970	0.104176	GUAACAG	ENST00000239940.7|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr2_-_11484710_11484812	0.0985033	GUAACAG	ENST00000315872.6|ROCK2|ENSG00000134318.9|Rho-associated, coiled-coil containing protein kinase 2
hg19_v2_chr9_+_131445928_131445934	0.0951292	GUAACAG	ENST00000372692.4|SET|ENSG00000119335.12|SET nuclear oncogene
hg19_v2_chr21_-_16437255_16437340	0.0937861	GUAACAG	ENST00000400199.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1 	ENST00000400202.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1
hg19_v2_chr1_-_205719295_205719404	0.0918165	GUAACAG	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr5_+_56469775_56469837	0.0897356	GUAACAG	ENST00000424459.3|GPBP1|ENSG00000062194.11|GC-rich promoter binding protein 1
hg19_v2_chr8_-_74791051_74791145	0.0886698	GUAACAG	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr4_+_128703295_128703496	0.0884384	GUAACAG	ENST00000296464.4|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like 	ENST00000508549.1|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like
hg19_v2_chr6_-_136610911_136610990	0.0839647	GUAACAG	ENST00000530767.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527759.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527536.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000529826.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000531224.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000353331.4|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1
hg19_v2_chr4_-_140098339_140098392	0.0815108	GUAACAG	ENST00000394235.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr14_+_39735411_39735502	0.0788613	GUAACAG	ENST00000603904.1|RP11-407N17.3|ENSG00000258941.2|cTAGE family member 5 isoform 4
hg19_v2_chr5_-_41510656_41510713	0.0781009	GUAACAG	ENST00000377801.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chr3_-_113465065_113465147	0.0777725	GUAACAG	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr9_-_3525968_3526016	0.0758861	GUAACAG	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr13_+_28813645_28813770	0.0746496	GUAACAG	ENST00000282391.5|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr10_+_103986085_103986085	0.0733806	GUAACAG	ENST00000370005.3|ELOVL3|ENSG00000119915.4|ELOVL fatty acid elongase 3
hg19_v2_chr10_-_88281494_88281572	0.0706169	GUAACAG	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr1_+_184356188_184356200	0.070366	GUAACAG	ENST00000235307.6|C1orf21|ENSG00000116667.8|chromosome 1 open reading frame 21
hg19_v2_chr4_+_52709229_52709345	0.0703053	GUAACAG	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chrX_+_119737806_119737835	0.0690865	GUAACAG	ENST00000371317.5|MCTS1|ENSG00000232119.3|malignant T cell amplified sequence 1
hg19_v2_chr17_-_40833858_40833861	0.0664865	GUAACAG	ENST00000332438.4|CCR10|ENSG00000184451.5|chemokine (C-C motif) receptor 10
hg19_v2_chr14_-_35182994_35183034	0.065754	GUAACAG	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr3_+_69812877_69812962	0.064451	GUAACAG	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr2_-_24149977_24150007	0.0636148	GUAACAG	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chrX_-_119694538_119694555	0.0627851	GUAACAG	ENST00000371322.5|CUL4B|ENSG00000158290.12|cullin 4B
hg19_v2_chr1_+_51701924_51702001	0.0604943	GUAACAG	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chr3_+_62304712_62304732	0.0596367	GUAACAG	ENST00000494481.1|C3orf14|ENSG00000114405.6|chromosome 3 open reading frame 14
hg19_v2_chr18_-_29522989_29523104	0.058935	GUAACAG	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr17_-_62658186_62658231	0.0587235	GUAACAG	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr10_-_65225722_65225755	0.0581393	GUAACAG	ENST00000399251.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr4_-_57301748_57301791	0.0569799	GUAACAG	ENST00000264220.2|PPAT|ENSG00000128059.4|phosphoribosyl pyrophosphate amidotransferase
hg19_v2_chr2_-_174830430_174830563	0.0563201	GUAACAG	ENST00000310015.6|SP3|ENSG00000172845.9|Sp3 transcription factor 	ENST00000455789.2|SP3|ENSG00000172845.9|Sp3 transcription factor
hg19_v2_chr11_+_101981169_101981210	0.055902	GUAACAG	ENST00000526343.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000282441.5|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000537274.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000345877.2|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr17_-_58603568_58603610	0.0557884	GUAACAG	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr5_-_98262240_98262240	0.0557636	GUAACAG	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr6_+_19837592_19837621	0.0534713	GUAACAG	ENST00000378700.3|ID4|ENSG00000172201.6|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
hg19_v2_chr18_+_43753974_43754019	0.0524261	GUAACAG	ENST00000282059.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25 	ENST00000321319.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25
hg19_v2_chr1_+_222791417_222791455	0.0500468	GUAACAG	ENST00000344922.5|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3 	ENST00000344441.6|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3 	ENST00000344507.1|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3
hg19_v2_chr11_+_74660278_74660334	0.0489831	GUAACAG	ENST00000263672.6|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000530257.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000526361.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000532972.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae)
hg19_v2_chr10_+_105726862_105726986	0.0464758	GUAACAG	ENST00000335753.4|SLK|ENSG00000065613.9|STE20-like kinase 	ENST00000369755.3|SLK|ENSG00000065613.9|STE20-like kinase
hg19_v2_chr12_+_124069070_124069106	0.0458528	GUAACAG	ENST00000262225.3|TMED2|ENSG00000086598.6|transmembrane emp24 domain trafficking protein 2 	ENST00000438031.2|TMED2|ENSG00000086598.6|transmembrane emp24 domain trafficking protein 2
hg19_v2_chr2_+_60983361_60983418	0.0449815	GUAACAG	ENST00000238714.3|PAPOLG|ENSG00000115421.8|poly(A) polymerase gamma
hg19_v2_chr7_-_94285511_94285522	0.0439248	GUAACAG	ENST00000265735.7|SGCE|ENSG00000127990.11|sarcoglycan, epsilon
hg19_v2_chr11_-_102962929_102962944	0.0438741	GUAACAG	ENST00000260247.5|DCUN1D5|ENSG00000137692.7|DCN1, defective in cullin neddylation 1, domain containing 5
hg19_v2_chr9_+_4679555_4679617	0.0424173	GUAACAG	ENST00000381858.1|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1 	ENST00000381854.3|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1
hg19_v2_chr4_+_39699664_39699772	0.0418531	GUAACAG	ENST00000261427.5|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000510934.1|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000295963.6|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K
hg19_v2_chr1_-_93645818_93645918	0.0412108	GUAACAG	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr14_-_77843390_77843462	0.0404231	GUAACAG	ENST00000216468.7|TMED8|ENSG00000100580.7|transmembrane emp24 protein transport domain containing 8
hg19_v2_chr12_-_88974236_88974256	0.0401766	GUAACAG	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chr5_-_76935513_76935513	0.0393118	GUAACAG	ENST00000306422.3|OTP|ENSG00000171540.6|orthopedia homeobox
hg19_v2_chr17_+_66508537_66508650	0.0389661	GUAACAG	ENST00000392711.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000585427.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589228.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000536854.2|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000588702.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589309.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr15_-_59225844_59225855	0.0386433	GUAACAG	ENST00000380516.2|SLTM|ENSG00000137776.12|SAFB-like, transcription modulator
hg19_v2_chr10_+_98592009_98592061	0.0381637	GUAACAG	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr7_+_77325738_77325789	0.0372831	GUAACAG	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chr3_-_71774516_71774587	0.0370105	GUAACAG	ENST00000425534.3|EIF4E3|ENSG00000163412.8|eukaryotic translation initiation factor 4E family member 3
hg19_v2_chr4_-_24586140_24586188	0.036447	GUAACAG	ENST00000336812.4|DHX15|ENSG00000109606.8|DEAH (Asp-Glu-Ala-His) box helicase 15
hg19_v2_chr2_-_68479614_68479685	0.0360448	GUAACAG	ENST00000234310.3|PPP3R1|ENSG00000221823.6|protein phosphatase 3, regulatory subunit B, alpha
hg19_v2_chr2_+_210444142_210444194	0.0360185	GUAACAG	ENST00000360351.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2 	ENST00000361559.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr1_+_82266053_82266082	0.0358291	GUAACAG	ENST00000370715.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370713.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000319517.6|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370717.2|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000394879.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000271029.4|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000335786.5|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr8_-_103425047_103425069	0.0348329	GUAACAG	ENST00000520539.1|UBR5|ENSG00000104517.8|ubiquitin protein ligase E3 component n-recognin 5
hg19_v2_chr20_-_524455_524466	0.0343816	GUAACAG	ENST00000349736.5|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide 	ENST00000217244.3|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide
hg19_v2_chr1_-_166028709_166028709	0.0330359	GUAACAG	ENST00000595430.1|AL626787.1|ENSG00000267884.1|AL626787.1
hg19_v2_chrX_-_135333722_135333743	0.0318798	GUAACAG	ENST00000316077.9|MAP7D3|ENSG00000129680.11|MAP7 domain containing 3
hg19_v2_chr14_+_39736299_39736412	0.0318672	GUAACAG	ENST00000341502.5|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000396158.2|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000280083.3|CTAGE5|ENSG00000150527.12|CTAGE family, member 5
hg19_v2_chr16_+_53088885_53088961	0.0317424	GUAACAG	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr3_-_72496035_72496069	0.031558	GUAACAG	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr21_-_19191703_19191718	0.031538	GUAACAG	ENST00000284881.4|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91 	ENST00000400559.3|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91 	ENST00000400558.3|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91
hg19_v2_chr3_-_98620500_98620547	0.0309432	GUAACAG	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr7_-_151217001_151217019	0.0307692	GUAACAG	ENST00000262187.5|RHEB|ENSG00000106615.5|Ras homolog enriched in brain
hg19_v2_chr3_-_57583130_57583152	0.0304695	GUAACAG	ENST00000303436.6|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4
hg19_v2_chr14_-_91282726_91282804	0.0300358	GUAACAG	ENST00000328459.6|TTC7B|ENSG00000165914.10|tetratricopeptide repeat domain 7B 	ENST00000357056.2|TTC7B|ENSG00000165914.10|tetratricopeptide repeat domain 7B
hg19_v2_chr3_-_122233723_122233797	0.0299712	GUAACAG	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr3_-_58419537_58419584	0.0297481	GUAACAG	ENST00000474765.1|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000485460.1|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000302746.6|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000383714.4|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta
hg19_v2_chr1_+_52521928_52521948	0.0296592	GUAACAG	ENST00000489308.2|BTF3L4|ENSG00000134717.13|basic transcription factor 3-like 4
hg19_v2_chr2_-_190445499_190445613	0.0267645	GUAACAG	ENST00000261024.2|SLC40A1|ENSG00000138449.6|solute carrier family 40 (iron-regulated transporter), member 1
hg19_v2_chr3_+_180630090_180630311	0.0266459	GUAACAG	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr6_-_111804393_111804436	0.026507	GUAACAG	ENST00000368802.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000368805.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chr3_+_37493610_37493651	0.0251597	GUAACAG	ENST00000264741.5|ITGA9|ENSG00000144668.7|integrin, alpha 9
hg19_v2_chr14_+_57046500_57046529	0.0250811	GUAACAG	ENST00000261556.6|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr11_-_46142948_46143043	0.0249623	GUAACAG	ENST00000257821.4|PHF21A|ENSG00000135365.11|PHD finger protein 21A
hg19_v2_chr4_+_166794383_166794500	0.0243772	GUAACAG	ENST00000061240.2|TLL1|ENSG00000038295.3|tolloid-like 1 	ENST00000507499.1|TLL1|ENSG00000038295.3|tolloid-like 1
hg19_v2_chr17_-_57784755_57784987	0.0239339	GUAACAG	ENST00000537860.1|PTRH2|ENSG00000141378.13|peptidyl-tRNA hydrolase 2 	ENST00000393038.2|PTRH2|ENSG00000141378.13|peptidyl-tRNA hydrolase 2 	ENST00000409433.2|PTRH2|ENSG00000141378.13|peptidyl-tRNA hydrolase 2
hg19_v2_chr2_-_230786679_230786758	0.0234062	GUAACAG	ENST00000543084.1|TRIP12|ENSG00000153827.9|thyroid hormone receptor interactor 12 	ENST00000343290.5|TRIP12|ENSG00000153827.9|thyroid hormone receptor interactor 12 	ENST00000389044.4|TRIP12|ENSG00000153827.9|thyroid hormone receptor interactor 12 	ENST00000283943.5|TRIP12|ENSG00000153827.9|thyroid hormone receptor interactor 12
hg19_v2_chr8_+_42752053_42752154	0.0233315	GUAACAG	ENST00000307602.4|HOOK3|ENSG00000168172.4|hook microtubule-tethering protein 3
hg19_v2_chr5_-_59995921_59996000	0.0233234	GUAACAG	ENST00000453022.2|DEPDC1B|ENSG00000035499.8|DEP domain containing 1B 	ENST00000545085.1|DEPDC1B|ENSG00000035499.8|DEP domain containing 1B 	ENST00000265036.5|DEPDC1B|ENSG00000035499.8|DEP domain containing 1B
hg19_v2_chr17_+_2496971_2497040	0.0233151	GUAACAG	ENST00000397195.5|PAFAH1B1|ENSG00000007168.8|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg19_v2_chr15_+_59063478_59063561	0.023192	GUAACAG	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr12_-_54673871_54673925	0.0226654	GUAACAG	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr9_+_108006880_108006943	0.021789	GUAACAG	ENST00000374723.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374720.3|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374724.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1
hg19_v2_chr6_+_133562472_133562556	0.0217767	GUAACAG	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chr14_-_38064198_38064239	0.0211817	GUAACAG	ENST00000250448.2|FOXA1|ENSG00000129514.4|forkhead box A1
hg19_v2_chr19_-_18632861_18632937	0.0210122	GUAACAG	ENST00000262809.4|ELL|ENSG00000105656.8|elongation factor RNA polymerase II
hg19_v2_chr4_-_23891693_23891706	0.020831	GUAACAG	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr9_-_74980113_74980163	0.0208254	GUAACAG	ENST00000376962.5|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000376960.4|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000237937.3|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5
hg19_v2_chr11_-_86666427_86666450	0.0207572	GUAACAG	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr18_-_23670546_23670605	0.0205862	GUAACAG	ENST00000542743.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000545952.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000539849.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000415083.2|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18
hg19_v2_chr15_+_77712993_77713081	0.0194151	GUAACAG	ENST00000336216.4|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000381714.3|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000558651.1|HMG20A|ENSG00000140382.10|high mobility group 20A
hg19_v2_chr5_-_83680603_83680617	0.0189072	GUAACAG	ENST00000296591.5|EDIL3|ENSG00000164176.8|EGF-like repeats and discoidin I-like domains 3
hg19_v2_chr1_+_100503643_100503677	0.0187557	GUAACAG	ENST00000370152.3|HIAT1|ENSG00000156875.9|hippocampus abundant transcript 1
hg19_v2_chr3_-_18466787_18466861	0.0182101	GUAACAG	ENST00000338745.6|SATB1|ENSG00000182568.12|SATB homeobox 1 	ENST00000450898.1|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr2_+_149402553_149402568	0.0182013	GUAACAG	ENST00000258484.6|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila) 	ENST00000409654.1|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila)
hg19_v2_chr7_+_145813453_145813557	0.0181868	GUAACAG	ENST00000361727.3|CNTNAP2|ENSG00000174469.13|contactin associated protein-like 2
hg19_v2_chr2_-_208634287_208634439	0.0180303	GUAACAG	ENST00000295417.3|FZD5|ENSG00000163251.3|frizzled family receptor 5
hg19_v2_chr1_-_243418344_243418356	0.0171876	GUAACAG	ENST00000366542.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr22_+_40390930_40390994	0.0169323	GUAACAG	ENST00000333407.6|FAM83F|ENSG00000133477.12|family with sequence similarity 83, member F
hg19_v2_chr15_-_72410109_72410161	0.0165603	GUAACAG	ENST00000564571.1|MYO9A|ENSG00000066933.11|myosin IXA
hg19_v2_chr10_+_116581503_116581570	0.0153964	GUAACAG	ENST00000369248.4|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369250.3|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369246.1|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1
hg19_v2_chr1_-_211752073_211752084	0.0153076	GUAACAG	ENST00000367001.4|SLC30A1|ENSG00000170385.9|solute carrier family 30 (zinc transporter), member 1
hg19_v2_chr20_-_43977055_43977073	0.0148911	GUAACAG	ENST00000372733.3|SDC4|ENSG00000124145.5|syndecan 4 	ENST00000537976.1|SDC4|ENSG00000124145.5|syndecan 4
hg19_v2_chr12_-_76425368_76425384	0.0148527	GUAACAG	ENST00000602540.1|PHLDA1|ENSG00000139289.9|pleckstrin homology-like domain, family A, member 1
hg19_v2_chr17_+_48796905_48797008	0.0145509	GUAACAG	ENST00000505658.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000393227.2|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000240304.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000311571.3|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000505619.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000544170.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000510984.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae)
hg19_v2_chr4_+_145567173_145567296	0.0145329	GUAACAG	ENST00000296575.3|HHIP|ENSG00000164161.5|hedgehog interacting protein
hg19_v2_chr3_+_147127142_147127171	0.0137226	GUAACAG	ENST00000282928.4|ZIC1|ENSG00000152977.5|Zic family member 1
hg19_v2_chr12_+_72666407_72666463	0.013469	GUAACAG	ENST00000261180.4|TRHDE|ENSG00000072657.4|thyrotropin-releasing hormone degrading enzyme
hg19_v2_chr6_-_99395787_99395878	0.0132352	GUAACAG	ENST00000369244.2|FBXL4|ENSG00000112234.4|F-box and leucine-rich repeat protein 4 	ENST00000229971.1|FBXL4|ENSG00000112234.4|F-box and leucine-rich repeat protein 4
hg19_v2_chr14_-_39639523_39639617	0.0132246	GUAACAG	ENST00000330149.5|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B 	ENST00000554018.1|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B 	ENST00000347691.5|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B
hg19_v2_chr3_-_133614597_133614681	0.0128908	GUAACAG	ENST00000285208.4|RAB6B|ENSG00000154917.6|RAB6B, member RAS oncogene family 	ENST00000460865.3|RAB6B|ENSG00000154917.6|RAB6B, member RAS oncogene family
hg19_v2_chr18_-_70535177_70535254	0.0125971	GUAACAG	ENST00000327305.6|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v2_chr2_-_208030647_208030689	0.0115899	GUAACAG	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr1_-_225840747_225840860	0.0113186	GUAACAG	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr6_+_163835669_163835693	0.0111578	GUAACAG	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr1_-_156051789_156051838	0.0109846	GUAACAG	ENST00000532414.2|MEX3A|ENSG00000254726.2|mex-3 RNA binding family member A
hg19_v2_chr4_+_86396265_86396276	0.0109449	GUAACAG	ENST00000395184.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr10_-_25012597_25012732	0.0108736	GUAACAG	ENST00000396432.2|ARHGAP21|ENSG00000107863.12|Rho GTPase activating protein 21
hg19_v2_chr11_-_36531774_36531858	0.0107943	GUAACAG	ENST00000348124.5|TRAF6|ENSG00000175104.10|TNF receptor-associated factor 6, E3 ubiquitin protein ligase 	ENST00000526995.1|TRAF6|ENSG00000175104.10|TNF receptor-associated factor 6, E3 ubiquitin protein ligase
hg19_v2_chr16_-_12009735_12009793	0.0101988	GUAACAG	ENST00000439887.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1 	ENST00000434724.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1
hg19_v2_chr12_+_93965451_93965494	0.0100984	GUAACAG	ENST00000548537.1|SOCS2|ENSG00000120833.9|suppressor of cytokine signaling 2
hg19_v2_chr18_+_19321281_19321334	0.00978752	GUAACAG	ENST00000261537.6|MIB1|ENSG00000101752.7|mindbomb E3 ubiquitin protein ligase 1
hg19_v2_chr1_-_92949505_92949543	0.00937037	GUAACAG	ENST00000370332.1|GFI1|ENSG00000162676.7|growth factor independent 1 transcription repressor
hg19_v2_chr1_+_24645807_24645819	0.00781305	GUAACAG	ENST00000361548.4|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr17_+_40985407_40985513	0.00763649	GUAACAG	ENST00000586114.1|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000590720.1|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000585805.1|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000541124.1|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000441946.2|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000591152.1|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000589469.1|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000293362.3|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000592169.1|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)
hg19_v2_chr9_-_124989804_124989865	0.00754272	GUAACAG	ENST00000373755.2|LHX6|ENSG00000106852.11|LIM homeobox 6 	ENST00000373754.2|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr12_-_31744031_31744059	0.00724259	GUAACAG	ENST00000389082.5|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chrX_+_70435044_70435109	0.00721274	GUAACAG	ENST00000374029.1|GJB1|ENSG00000169562.9|gap junction protein, beta 1, 32kDa 	ENST00000374022.3|GJB1|ENSG00000169562.9|gap junction protein, beta 1, 32kDa 	ENST00000447581.1|GJB1|ENSG00000169562.9|gap junction protein, beta 1, 32kDa
hg19_v2_chr8_-_125384927_125384952	0.00638745	GUAACAG	ENST00000297632.6|TMEM65|ENSG00000164983.6|transmembrane protein 65
hg19_v2_chr3_+_196466710_196466824	0.00582524	GUAACAG	ENST00000327134.3|PAK2|ENSG00000180370.6|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v2_chr21_-_34960948_34961024	0.00539576	GUAACAG	ENST00000453626.1|DONSON|ENSG00000159147.13|downstream neighbor of SON 	ENST00000303113.6|DONSON|ENSG00000159147.13|downstream neighbor of SON 	ENST00000432378.1|DONSON|ENSG00000159147.13|downstream neighbor of SON 	ENST00000303071.5|DONSON|ENSG00000159147.13|downstream neighbor of SON
hg19_v2_chr7_-_139876812_139876860	0.00513722	GUAACAG	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr8_+_125551338_125551425	0.00507906	GUAACAG	ENST00000276689.3|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa 	ENST00000518008.1|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa 	ENST00000522532.1|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa 	ENST00000517367.1|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa
hg19_v2_chr5_+_14664762_14664868	0.00444715	GUAACAG	ENST00000284274.4|FAM105B|ENSG00000154124.4|family with sequence similarity 105, member B
hg19_v2_chr20_-_40247133_40247194	0.00380596	GUAACAG	ENST00000373233.3|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6 	ENST00000309279.7|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6
hg19_v2_chr4_-_153457197_153457268	0.00362385	GUAACAG	ENST00000281708.4|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chr3_+_39851094_39851151	0.00344531	GUAACAG	ENST00000302541.6|MYRIP|ENSG00000170011.9|myosin VIIA and Rab interacting protein
hg19_v2_chr20_+_36661910_36661968	0.00289858	GUAACAG	ENST00000373433.4|RPRD1B|ENSG00000101413.7|regulation of nuclear pre-mRNA domain containing 1B
hg19_v2_chr2_+_102508955_102508955	0.00115352	GUAACAG	ENST00000414004.2|FLJ20373|ENSG00000233404.2|FLJ20373
hg19_v2_chr11_+_12695944_12695989	0.000509584	GUAACAG	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr11_-_115375107_115375283	0.000207363	GUAACAG	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr22_+_41347363_41347399	1.06342e-05	GUAACAG	ENST00000216225.8|RBX1|ENSG00000100387.8|ring-box 1, E3 ubiquitin protein ligase
