hg19_v2_chr19_-_48673465_48673543	0.896011	GLI2	ENST00000598938.1|LIG1|ENSG00000105486.9|ligase I, DNA, ATP-dependent
hg19_v2_chr3_+_184279566_184279583	0.597532	GLI2	ENST00000330394.2|EPHB3|ENSG00000182580.2|EPH receptor B3
hg19_v2_chr19_-_49522727_49522759	0.561135	GLI2	ENST00000600007.1|CTB-60B18.10|ENSG00000268655.1|CTB-60B18.10
hg19_v2_chr7_-_92465868_92465922	0.55076	GLI2	ENST00000424848.2|CDK6|ENSG00000105810.5|cyclin-dependent kinase 6
hg19_v2_chr12_+_116985896_116985920	0.518466	GLI2	ENST00000547114.1|RP11-809C9.2|ENSG00000258102.1|RP11-809C9.2
hg19_v2_chr3_-_10052869_10052893	0.443742	GLI2	ENST00000454232.1|AC022007.5|ENSG00000206567.5|AC022007.5
hg19_v2_chr9_-_99329098_99329143	0.417114	GLI2	ENST00000452280.1|CDC14B|ENSG00000081377.12|cell division cycle 14B
hg19_v2_chr2_+_85646054_85646054	0.404631	GLI2	ENST00000389938.2|SH2D6|ENSG00000152292.12|SH2 domain containing 6
hg19_v2_chr7_-_127032114_127032172	0.402268	GLI2	ENST00000436992.1|ZNF800|ENSG00000048405.5|zinc finger protein 800
hg19_v2_chr17_-_80059726_80059809	0.390404	GLI2	ENST00000583053.1|CCDC57|ENSG00000176155.14|coiled-coil domain containing 57
hg19_v2_chr1_-_16563641_16563709	0.386209	GLI2	ENST00000375599.3|RSG1|ENSG00000132881.7|REM2 and RAB-like small GTPase 1
hg19_v2_chr8_+_94752349_94752349	0.383723	GLI2	ENST00000391680.1|RBM12B-AS1|ENSG00000212998.1|RBM12B antisense RNA 1
hg19_v2_chr11_+_68451943_68451986	0.380886	GLI2	ENST00000265643.3|GAL|ENSG00000069482.6|galanin/GMAP prepropeptide
hg19_v2_chr16_+_2521500_2521514	0.367303	GLI2	ENST00000293973.1|NTN3|ENSG00000162068.1|netrin 3
hg19_v2_chr20_+_34679725_34679774	0.360903	GLI2	ENST00000432589.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chrX_-_135056106_135056128	0.358369	GLI2	ENST00000433339.2|MMGT1|ENSG00000169446.4|membrane magnesium transporter 1
hg19_v2_chr8_-_128960591_128960591	0.354646	GLI2	ENST00000539634.1|TMEM75|ENSG00000256655.1|transmembrane protein 75
hg19_v2_chr3_-_88108192_88108203	0.34864	GLI2	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr3_-_10052763_10052816	0.347621	GLI2	ENST00000383808.2|AC022007.5|ENSG00000206567.5|AC022007.5	ENST00000426698.1|AC022007.5|ENSG00000206567.5|AC022007.5	ENST00000470827.2|EMC3|ENSG00000125037.8|ER membrane protein complex subunit 3
hg19_v2_chr12_+_50101500_50101550	0.345241	GLI2	ENST00000548809.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000551154.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6
hg19_v2_chr22_-_41258074_41258130	0.330484	GLI2	ENST00000307221.4|DNAJB7|ENSG00000172404.4|DnaJ (Hsp40) homolog, subfamily B, member 7
hg19_v2_chr16_-_850723_850741	0.315334	GLI2	ENST00000248150.4|GNG13|ENSG00000127588.4|guanine nucleotide binding protein (G protein), gamma 13
hg19_v2_chr20_-_58508702_58508728	0.313147	GLI2	ENST00000357552.3|SYCP2|ENSG00000196074.8|synaptonemal complex protein 2 	ENST00000425931.1|SYCP2|ENSG00000196074.8|synaptonemal complex protein 2
hg19_v2_chr3_-_135915146_135915194	0.307152	GLI2	ENST00000473093.1|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr11_-_73720122_73720136	0.304989	GLI2	ENST00000426995.2|UCP3|ENSG00000175564.8|uncoupling protein 3 (mitochondrial, proton carrier)
hg19_v2_chr16_+_25078208_25078258	0.298421	GLI2	ENST00000571219.1|RP11-266L9.5|ENSG00000262155.1|RP11-266L9.5
hg19_v2_chr11_-_128775930_128775930	0.295823	GLI2	ENST00000524878.1|C11orf45|ENSG00000174370.5|chromosome 11 open reading frame 45
hg19_v2_chr22_+_20905422_20905577	0.295214	GLI2	ENST00000424287.1|MED15|ENSG00000099917.13|mediator complex subunit 15 	ENST00000423862.1|MED15|ENSG00000099917.13|mediator complex subunit 15
hg19_v2_chr10_-_5638048_5638094	0.28733	GLI2	ENST00000478294.1|RP13-463N16.6|ENSG00000242147.1|RP13-463N16.6
hg19_v2_chr6_-_121655593_121655661	0.280283	GLI2	ENST00000398212.2|TBC1D32|ENSG00000146350.9|TBC1 domain family, member 32
hg19_v2_chr3_-_10334585_10334601	0.275601	GLI2	ENST00000430179.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000449238.2|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000437422.2|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000287656.7|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000457360.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000439975.2|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000446937.2|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide
hg19_v2_chr14_-_51297360_51297426	0.274167	GLI2	ENST00000496749.1|NIN|ENSG00000100503.19|ninein (GSK3B interacting protein)
hg19_v2_chr17_+_50939459_50939481	0.273031	GLI2	ENST00000412360.1|AC102948.2|ENSG00000226364.1|Uncharacterized protein
hg19_v2_chr19_-_35981358_35981433	0.272087	GLI2	ENST00000484218.2|KRTDAP|ENSG00000188508.6|keratinocyte differentiation-associated protein 	ENST00000338897.3|KRTDAP|ENSG00000188508.6|keratinocyte differentiation-associated protein
hg19_v2_chr22_+_23248512_23248512	0.27153	GLI2	ENST00000390325.2|IGLC3|ENSG00000211679.2|immunoglobulin lambda constant 3 (Kern-Oz+ marker)
hg19_v2_chr19_+_56989485_56989565	0.270026	GLI2	ENST00000585445.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000586091.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000594783.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000592146.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000588158.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000299997.4|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000591797.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head)
hg19_v2_chr12_-_10022735_10022735	0.267541	GLI2	ENST00000228438.2|CLEC2B|ENSG00000110852.4|C-type lectin domain family 2, member B
hg19_v2_chr10_+_89124746_89124746	0.263221	GLI2	ENST00000465545.1|NUTM2D|ENSG00000214562.9|NUT family member 2D
hg19_v2_chr2_-_201936302_201936416	0.261882	GLI2	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr2_+_241564655_241564668	0.260819	GLI2	ENST00000407714.1|GPR35|ENSG00000178623.7|G protein-coupled receptor 35
hg19_v2_chr2_-_112237835_112237844	0.260576	GLI2	ENST00000442293.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding) 	ENST00000439494.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding)
hg19_v2_chr14_+_96342729_96342790	0.253745	GLI2	ENST00000504119.1|LINC00617|ENSG00000250366.2|long intergenic non-protein coding RNA 617
hg19_v2_chr5_-_102455801_102455855	0.253241	GLI2	ENST00000508629.1|GIN1|ENSG00000145723.12|gypsy retrotransposon integrase 1 	ENST00000399004.2|GIN1|ENSG00000145723.12|gypsy retrotransposon integrase 1
hg19_v2_chr17_+_73629500_73629532	0.251125	GLI2	ENST00000375215.3|SMIM5|ENSG00000204323.5|small integral membrane protein 5
hg19_v2_chr17_-_4710288_4710311	0.249122	GLI2	ENST00000571067.1|RP11-81A22.5|ENSG00000262165.1|RP11-81A22.5
hg19_v2_chr1_-_46089718_46089734	0.247914	GLI2	ENST00000421127.2|CCDC17|ENSG00000159588.10|coiled-coil domain containing 17 	ENST00000343901.2|CCDC17|ENSG00000159588.10|coiled-coil domain containing 17 	ENST00000528266.1|CCDC17|ENSG00000159588.10|coiled-coil domain containing 17
hg19_v2_chr8_-_90993869_90993920	0.247741	GLI2	ENST00000517772.1|NBN|ENSG00000104320.9|nibrin
hg19_v2_chr12_+_133707570_133707570	0.247506	GLI2	ENST00000416488.1|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000540096.2|CTD-2140B24.4|ENSG00000256825.4|Zinc finger protein 268
hg19_v2_chr6_+_116892641_116892726	0.247362	GLI2	ENST00000487832.2|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000518117.1|RWDD1|ENSG00000111832.8|RWD domain containing 1
hg19_v2_chr10_-_105238997_105238997	0.245708	GLI2	ENST00000369783.4|CALHM3|ENSG00000183128.7|calcium homeostasis modulator 3
hg19_v2_chr15_-_43882140_43882140	0.241421	GLI2	ENST00000429176.1|PPIP5K1|ENSG00000168781.17|diphosphoinositol pentakisphosphate kinase 1
hg19_v2_chr7_-_994302_994333	0.240285	GLI2	ENST00000265846.5|ADAP1|ENSG00000105963.9|ArfGAP with dual PH domains 1
hg19_v2_chr16_+_67063262_67063364	0.239374	GLI2	ENST00000565389.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr3_-_38071122_38071253	0.229702	GLI2	ENST00000334661.4|PLCD1|ENSG00000187091.9|phospholipase C, delta 1
hg19_v2_chr8_+_96145974_96146041	0.228851	GLI2	ENST00000315367.3|PLEKHF2|ENSG00000175895.3|pleckstrin homology domain containing, family F (with FYVE domain) member 2
hg19_v2_chr5_-_89705537_89705610	0.226993	GLI2	ENST00000522864.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000522083.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000522565.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000522842.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000283122.3|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3
hg19_v2_chr22_-_21482352_21482352	0.225925	GLI2	ENST00000329949.3|POM121L7|ENSG00000239511.1|POM121 transmembrane nucleoporin-like 7
hg19_v2_chr1_-_21948906_21949075	0.22585	GLI2	ENST00000374761.2|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein 	ENST00000599760.1|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein
hg19_v2_chr2_+_121493717_121493823	0.221987	GLI2	ENST00000418323.1|GLI2|ENSG00000074047.16|GLI family zinc finger 2
hg19_v2_chr3_-_24536453_24536500	0.220989	GLI2	ENST00000453729.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000413780.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr11_+_117103333_117103419	0.217888	GLI2	ENST00000534428.1|RNF214|ENSG00000167257.6|ring finger protein 214
hg19_v2_chr21_-_38445470_38445491	0.215788	GLI2	ENST00000399098.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P
hg19_v2_chr11_-_2906979_2907111	0.21468	GLI2	ENST00000380725.1|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000313407.6|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000430149.2|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000440480.2|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000414822.3|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2)
hg19_v2_chr1_+_153600869_153600940	0.214393	GLI2	ENST00000292169.1|S100A1|ENSG00000160678.7|S100 calcium binding protein A1 	ENST00000368696.3|S100A1|ENSG00000160678.7|S100 calcium binding protein A1 	ENST00000436839.1|S100A1|ENSG00000160678.7|S100 calcium binding protein A1
hg19_v2_chr13_-_52026730_52026775	0.210758	GLI2	ENST00000420668.2|INTS6|ENSG00000102786.10|integrator complex subunit 6
hg19_v2_chr17_+_74723031_74723047	0.210684	GLI2	ENST00000586200.1|METTL23|ENSG00000181038.9|methyltransferase like 23
hg19_v2_chr5_-_43412418_43412499	0.210539	GLI2	ENST00000537013.1|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28 	ENST00000361115.4|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28
hg19_v2_chr8_+_7705398_7705621	0.20994	GLI2	ENST00000400125.2|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000434307.2|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000326558.5|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000351436.4|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000528033.1|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A
hg19_v2_chr16_+_56691606_56691719	0.208505	GLI2	ENST00000334350.6|MT1F|ENSG00000198417.5|metallothionein 1F
hg19_v2_chr4_+_95129061_95129198	0.205853	GLI2	ENST00000354268.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr21_+_38888740_38888740	0.205806	GLI2	ENST00000597817.1|AP001421.1|ENSG00000267937.1|Uncharacterized protein
hg19_v2_chr8_-_7320974_7321196	0.205446	GLI2	ENST00000528943.1|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000359758.5|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000361111.2|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000398462.2|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000297498.2|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000317900.5|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B
hg19_v2_chr6_+_26273144_26273175	0.205323	GLI2	ENST00000377733.2|HIST1H2BI|ENSG00000168242.3|histone cluster 1, H2bi
hg19_v2_chr21_-_35340759_35340874	0.203698	GLI2	ENST00000607953.1|AP000569.9|ENSG00000273102.1|AP000569.9
hg19_v2_chr8_-_61880248_61880334	0.2035	GLI2	ENST00000525556.1|AC022182.3|ENSG00000254802.1|AC022182.3
hg19_v2_chr1_+_3385085_3385108	0.202459	GLI2	ENST00000445297.1|ARHGEF16|ENSG00000130762.10|Rho guanine nucleotide exchange factor (GEF) 16
hg19_v2_chr17_+_6544328_6544342	0.2017	GLI2	ENST00000570330.1|TXNDC17|ENSG00000129235.6|thioredoxin domain containing 17
hg19_v2_chr17_+_73996987_73996987	0.200932	GLI2	ENST00000588812.1|CDK3|ENSG00000250506.2|cyclin-dependent kinase 3 	ENST00000448471.1|CDK3|ENSG00000250506.2|cyclin-dependent kinase 3
hg19_v2_chr10_-_105156198_105156248	0.200641	GLI2	ENST00000369815.1|USMG5|ENSG00000173915.8|up-regulated during skeletal muscle growth 5 homolog (mouse) 	ENST00000309579.3|USMG5|ENSG00000173915.8|up-regulated during skeletal muscle growth 5 homolog (mouse) 	ENST00000337003.4|USMG5|ENSG00000173915.8|up-regulated during skeletal muscle growth 5 homolog (mouse)
hg19_v2_chr19_+_17638059_17638113	0.200527	GLI2	ENST00000599164.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C 	ENST00000449408.2|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C 	ENST00000600871.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C 	ENST00000599124.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C
hg19_v2_chr11_-_73720276_73720286	0.200304	GLI2	ENST00000348534.4|UCP3|ENSG00000175564.8|uncoupling protein 3 (mitochondrial, proton carrier)
hg19_v2_chr15_+_29211570_29211611	0.199957	GLI2	ENST00000558804.1|APBA2|ENSG00000034053.10|amyloid beta (A4) precursor protein-binding, family A, member 2
hg19_v2_chr7_-_127032363_127032420	0.199603	GLI2	ENST00000393312.1|ZNF800|ENSG00000048405.5|zinc finger protein 800
hg19_v2_chr1_-_32403370_32403387	0.199065	GLI2	ENST00000534796.1|PTP4A2|ENSG00000184007.13|protein tyrosine phosphatase type IVA, member 2
hg19_v2_chr16_+_67063142_67063153	0.199017	GLI2	ENST00000412916.2|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr1_-_245134273_245134390	0.198533	GLI2	ENST00000607453.1|RP11-156E8.1|ENSG00000272195.1|Uncharacterized protein
hg19_v2_chr1_-_55266865_55266876	0.195683	GLI2	ENST00000371274.4|TTC22|ENSG00000006555.6|tetratricopeptide repeat domain 22
hg19_v2_chr4_-_187476721_187476721	0.195498	GLI2	ENST00000307161.5|MTNR1A|ENSG00000168412.6|melatonin receptor 1A
hg19_v2_chr7_+_106809406_106809460	0.195167	GLI2	ENST00000468410.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000478930.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000464009.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000222574.4|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr20_+_30598231_30598260	0.194714	GLI2	ENST00000300415.8|CCM2L|ENSG00000101331.11|cerebral cavernous malformation 2-like 	ENST00000262659.8|CCM2L|ENSG00000101331.11|cerebral cavernous malformation 2-like
hg19_v2_chr19_+_35810164_35810291	0.19447	GLI2	ENST00000598537.1|CD22|ENSG00000012124.10|CD22 molecule
hg19_v2_chr5_-_178054105_178054119	0.193745	GLI2	ENST00000316308.4|CLK4|ENSG00000113240.8|CDC-like kinase 4
hg19_v2_chrX_-_107334790_107334848	0.192217	GLI2	ENST00000217958.3|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
hg19_v2_chr4_-_156298087_156298127	0.192173	GLI2	ENST00000311277.4|MAP9|ENSG00000164114.14|microtubule-associated protein 9
hg19_v2_chr5_-_89770171_89770258	0.190664	GLI2	ENST00000514906.1|MBLAC2|ENSG00000176055.9|metallo-beta-lactamase domain containing 2
hg19_v2_chr21_+_34697258_34697336	0.18997	GLI2	ENST00000442071.1|IFNAR1|ENSG00000142166.8|interferon (alpha, beta and omega) receptor 1 	ENST00000442357.2|IFNAR1|ENSG00000142166.8|interferon (alpha, beta and omega) receptor 1
hg19_v2_chr17_-_71258019_71258019	0.189912	GLI2	ENST00000344935.4|CPSF4L|ENSG00000187959.5|cleavage and polyadenylation specific factor 4-like
hg19_v2_chr22_+_23243156_23243156	0.188959	GLI2	ENST00000390323.2|IGLC2|ENSG00000211677.2|immunoglobulin lambda constant 2 (Kern-Oz- marker)
hg19_v2_chr22_+_45714672_45714710	0.188132	GLI2	ENST00000424557.1|FAM118A|ENSG00000100376.7|family with sequence similarity 118, member A
hg19_v2_chr7_-_105319536_105319611	0.18813	GLI2	ENST00000477775.1|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr7_+_23145884_23145917	0.188042	GLI2	ENST00000409689.1|KLHL7|ENSG00000122550.13|kelch-like family member 7 	ENST00000410047.1|KLHL7|ENSG00000122550.13|kelch-like family member 7
hg19_v2_chr16_-_15736345_15736433	0.187831	GLI2	ENST00000549219.1|KIAA0430|ENSG00000166783.15|KIAA0430
hg19_v2_chr9_+_108456800_108456849	0.185326	GLI2	ENST00000434214.1|TMEM38B|ENSG00000095209.7|transmembrane protein 38B 	ENST00000374692.3|TMEM38B|ENSG00000095209.7|transmembrane protein 38B
hg19_v2_chr15_+_59063478_59063561	0.185309	GLI2	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr5_+_118407053_118407239	0.183994	GLI2	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr11_-_118550375_118550407	0.183826	GLI2	ENST00000525958.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000264029.4|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000397925.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000529101.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein)
hg19_v2_chr22_+_45714361_45714374	0.183274	GLI2	ENST00000452238.1|FAM118A|ENSG00000100376.7|family with sequence similarity 118, member A
hg19_v2_chr9_-_139927462_139927508	0.183238	GLI2	ENST00000314412.6|FUT7|ENSG00000180549.7|fucosyltransferase 7 (alpha (1,3) fucosyltransferase)
hg19_v2_chr4_+_72052964_72053013	0.183087	GLI2	ENST00000264485.5|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000425175.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr2_+_241544834_241544862	0.181964	GLI2	ENST00000319838.5|GPR35|ENSG00000178623.7|G protein-coupled receptor 35 	ENST00000403859.1|GPR35|ENSG00000178623.7|G protein-coupled receptor 35 	ENST00000438013.2|GPR35|ENSG00000178623.7|G protein-coupled receptor 35
hg19_v2_chr18_+_56807096_56807175	0.180864	GLI2	ENST00000588875.1|SEC11C|ENSG00000166562.4|SEC11 homolog C (S. cerevisiae)
hg19_v2_chr15_-_98417780_98417780	0.180632	GLI2	ENST00000503874.3|LINC00923|ENSG00000251209.3|long intergenic non-protein coding RNA 923
hg19_v2_chrX_+_17755696_17755845	0.178688	GLI2	ENST00000419185.1|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila)
hg19_v2_chr19_-_17571722_17571763	0.178425	GLI2	ENST00000301944.2|NXNL1|ENSG00000171773.2|nucleoredoxin-like 1
hg19_v2_chr2_-_197041193_197041227	0.178244	GLI2	ENST00000409228.1|STK17B|ENSG00000081320.6|serine/threonine kinase 17b
hg19_v2_chr5_-_82373260_82373315	0.177138	GLI2	ENST00000502346.1|TMEM167A|ENSG00000174695.5|transmembrane protein 167A
hg19_v2_chr2_-_232395169_232395206	0.176135	GLI2	ENST00000305141.4|NMUR1|ENSG00000171596.6|neuromedin U receptor 1
hg19_v2_chr5_-_132299313_132299334	0.175686	GLI2	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr1_-_41487415_41487426	0.175357	GLI2	ENST00000372611.1|SLFNL1|ENSG00000171790.11|schlafen-like 1
hg19_v2_chr11_+_66045634_66045710	0.175068	GLI2	ENST00000528852.1|CNIH2|ENSG00000174871.6|cornichon family AMPA receptor auxiliary protein 2 	ENST00000311445.6|CNIH2|ENSG00000174871.6|cornichon family AMPA receptor auxiliary protein 2
hg19_v2_chr5_+_140579162_140579348	0.174931	GLI2	ENST00000536699.1|PCDHB11|ENSG00000197479.4|protocadherin beta 11 	ENST00000354757.3|PCDHB11|ENSG00000197479.4|protocadherin beta 11
hg19_v2_chr2_+_220379052_220379131	0.174909	GLI2	ENST00000347842.3|ASIC4|ENSG00000072182.8|acid-sensing (proton-gated) ion channel family member 4 	ENST00000358078.4|ASIC4|ENSG00000072182.8|acid-sensing (proton-gated) ion channel family member 4
hg19_v2_chr20_-_18447667_18447829	0.174897	GLI2	ENST00000262547.5|DZANK1|ENSG00000089091.12|double zinc ribbon and ankyrin repeat domains 1 	ENST00000329494.5|DZANK1|ENSG00000089091.12|double zinc ribbon and ankyrin repeat domains 1 	ENST00000357236.4|DZANK1|ENSG00000089091.12|double zinc ribbon and ankyrin repeat domains 1
hg19_v2_chr17_-_30185971_30186093	0.174162	GLI2	ENST00000378634.2|COPRS|ENSG00000172301.6|coordinator of PRMT5, differentiation stimulator
hg19_v2_chr11_+_18230685_18230720	0.174072	GLI2	ENST00000340135.3|RP11-113D6.10|ENSG00000189332.4|Putative mitochondrial carrier protein LOC494141  	ENST00000534640.1|RP11-113D6.10|ENSG00000189332.4|Putative mitochondrial carrier protein LOC494141
hg19_v2_chr2_+_11295624_11295735	0.173993	GLI2	ENST00000402361.1|PQLC3|ENSG00000162976.8|PQ loop repeat containing 3 	ENST00000428481.1|PQLC3|ENSG00000162976.8|PQ loop repeat containing 3
hg19_v2_chr15_-_49447771_49447822	0.172914	GLI2	ENST00000558843.1|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000542928.1|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000561248.1|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chr11_-_118550346_118550364	0.17272	GLI2	ENST00000530256.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein)
hg19_v2_chr19_+_1908013_1908035	0.172278	GLI2	ENST00000454697.1|ADAT3|ENSG00000213638.4|adenosine deaminase, tRNA-specific 3
hg19_v2_chr4_+_95128748_95128794	0.171395	GLI2	ENST00000359052.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr1_-_45308616_45308735	0.171035	GLI2	ENST00000447098.2|PTCH2|ENSG00000117425.9|patched 2 	ENST00000372192.3|PTCH2|ENSG00000117425.9|patched 2
hg19_v2_chr1_+_46640750_46640770	0.170509	GLI2	ENST00000372003.1|TSPAN1|ENSG00000117472.5|tetraspanin 1
hg19_v2_chr17_-_74582191_74582210	0.170117	GLI2	ENST00000225276.5|ST6GALNAC2|ENSG00000070731.5|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
hg19_v2_chr5_+_102455853_102455961	0.169194	GLI2	ENST00000515845.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000321521.9|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000507921.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2
hg19_v2_chr14_+_106938440_106938474	0.169069	GLI2	ENST00000433371.1|LINC00221|ENSG00000187156.4|long intergenic non-protein coding RNA 221 	ENST00000449670.1|LINC00221|ENSG00000187156.4|long intergenic non-protein coding RNA 221 	ENST00000334298.3|LINC00221|ENSG00000187156.4|long intergenic non-protein coding RNA 221
hg19_v2_chr19_-_58220517_58220583	0.168664	GLI2	ENST00000512439.2|ZNF154|ENSG00000179909.11|zinc finger protein 154 	ENST00000426889.1|ZNF154|ENSG00000179909.11|zinc finger protein 154
hg19_v2_chr6_-_84937314_84937372	0.167225	GLI2	ENST00000257766.4|KIAA1009|ENSG00000135315.7|KIAA1009 	ENST00000403245.3|KIAA1009|ENSG00000135315.7|KIAA1009
hg19_v2_chr1_-_47697387_47697457	0.164744	GLI2	ENST00000371884.2|TAL1|ENSG00000162367.7|T-cell acute lymphocytic leukemia 1
hg19_v2_chr4_-_107237374_107237428	0.163887	GLI2	ENST00000361687.4|TBCK|ENSG00000145348.12|TBC1 domain containing kinase 	ENST00000507696.1|TBCK|ENSG00000145348.12|TBC1 domain containing kinase 	ENST00000394708.2|TBCK|ENSG00000145348.12|TBC1 domain containing kinase 	ENST00000509532.1|TBCK|ENSG00000145348.12|TBC1 domain containing kinase
hg19_v2_chr14_+_105147464_105147523	0.163652	GLI2	ENST00000540171.2|RP11-982M15.6|ENSG00000256050.2|RP11-982M15.6
hg19_v2_chr19_-_49176264_49176338	0.163451	GLI2	ENST00000270235.4|NTN5|ENSG00000142233.7|netrin 5 	ENST00000596844.1|NTN5|ENSG00000142233.7|netrin 5
hg19_v2_chr3_+_88108381_88108450	0.163389	GLI2	ENST00000473136.1|RP11-159G9.5|ENSG00000229729.3|Uncharacterized protein
hg19_v2_chr3_-_138312971_138313132	0.16271	GLI2	ENST00000485115.1|CEP70|ENSG00000114107.4|centrosomal protein 70kDa 	ENST00000484888.1|CEP70|ENSG00000114107.4|centrosomal protein 70kDa 	ENST00000468900.1|CEP70|ENSG00000114107.4|centrosomal protein 70kDa 	ENST00000542237.1|CEP70|ENSG00000114107.4|centrosomal protein 70kDa 	ENST00000481834.1|CEP70|ENSG00000114107.4|centrosomal protein 70kDa
hg19_v2_chr1_-_200379180_200379191	0.162525	GLI2	ENST00000294740.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr1_-_182573514_182573543	0.161931	GLI2	ENST00000367558.5|RGS16|ENSG00000143333.6|regulator of G-protein signaling 16
hg19_v2_chr16_-_21452040_21452040	0.161754	GLI2	ENST00000521589.1|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3
hg19_v2_chr10_+_70320413_70320413	0.161617	GLI2	ENST00000373644.4|TET1|ENSG00000138336.8|tet methylcytosine dioxygenase 1
hg19_v2_chr4_-_107237340_107237371	0.160824	GLI2	ENST00000394706.3|TBCK|ENSG00000145348.12|TBC1 domain containing kinase
hg19_v2_chrX_-_30326445_30326605	0.158629	GLI2	ENST00000378963.1|NR0B1|ENSG00000169297.6|nuclear receptor subfamily 0, group B, member 1
hg19_v2_chr19_+_3539152_3539177	0.15817	GLI2	ENST00000329493.5|C19orf71|ENSG00000183397.5|chromosome 19 open reading frame 71
hg19_v2_chr5_+_102455968_102456013	0.157937	GLI2	ENST00000358359.3|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2
hg19_v2_chr8_+_31497271_31497285	0.157857	GLI2	ENST00000520407.1|NRG1|ENSG00000157168.14|neuregulin 1
hg19_v2_chr14_-_24584138_24584223	0.157541	GLI2	ENST00000558280.1|NRL|ENSG00000129535.8|neural retina leucine zipper 	ENST00000561028.1|NRL|ENSG00000129535.8|neural retina leucine zipper
hg19_v2_chr2_-_39348137_39348212	0.157506	GLI2	ENST00000426016.1|SOS1|ENSG00000115904.8|son of sevenless homolog 1 (Drosophila)
hg19_v2_chr1_+_152178320_152178334	0.157091	GLI2	ENST00000429352.1|RP11-107M16.2|ENSG00000236427.1|RP11-107M16.2
hg19_v2_chrX_+_55744166_55744222	0.156564	GLI2	ENST00000374941.4|RRAGB|ENSG00000083750.8|Ras-related GTP binding B 	ENST00000414239.1|RRAGB|ENSG00000083750.8|Ras-related GTP binding B
hg19_v2_chr2_+_223536428_223536505	0.156385	GLI2	ENST00000446656.3|MOGAT1|ENSG00000124003.9|monoacylglycerol O-acyltransferase 1
hg19_v2_chr7_+_116593536_116593566	0.15637	GLI2	ENST00000417919.1|ST7|ENSG00000004866.14|suppression of tumorigenicity 7
hg19_v2_chr9_+_19408919_19408931	0.155894	GLI2	ENST00000380376.1|ACER2|ENSG00000177076.4|alkaline ceramidase 2
hg19_v2_chr5_-_178054014_178054096	0.154293	GLI2	ENST00000520957.1|CLK4|ENSG00000113240.8|CDC-like kinase 4
hg19_v2_chr9_-_35042824_35042824	0.154049	GLI2	ENST00000595331.1|FLJ00273|ENSG00000269510.1|FLJ00273
hg19_v2_chr11_-_111957451_111957522	0.153662	GLI2	ENST00000504148.2|TIMM8B|ENSG00000150779.7|translocase of inner mitochondrial membrane 8 homolog B (yeast) 	ENST00000541231.1|TIMM8B|ENSG00000150779.7|translocase of inner mitochondrial membrane 8 homolog B (yeast)
hg19_v2_chr8_+_94929168_94929235	0.149148	GLI2	ENST00000518107.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000396200.3|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr2_-_169746878_169746970	0.149106	GLI2	ENST00000282074.2|SPC25|ENSG00000152253.4|SPC25, NDC80 kinetochore complex component
hg19_v2_chr16_+_56691838_56691862	0.148409	GLI2	ENST00000394501.2|MT1F|ENSG00000198417.5|metallothionein 1F
hg19_v2_chr3_+_44626446_44626477	0.148311	GLI2	ENST00000441021.1|ZNF660|ENSG00000144792.5|zinc finger protein 660 	ENST00000322734.2|ZNF660|ENSG00000144792.5|zinc finger protein 660
hg19_v2_chrX_+_55744228_55744318	0.148091	GLI2	ENST00000262850.7|RRAGB|ENSG00000083750.8|Ras-related GTP binding B
hg19_v2_chr20_-_58508359_58508420	0.147855	GLI2	ENST00000446834.1|SYCP2|ENSG00000196074.8|synaptonemal complex protein 2
hg19_v2_chr1_+_152486950_152486978	0.147479	GLI2	ENST00000368790.3|CRCT1|ENSG00000169509.5|cysteine-rich C-terminal 1
hg19_v2_chr19_+_45418067_45418126	0.145657	GLI2	ENST00000589078.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000586638.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr6_-_29648887_29648944	0.145391	GLI2	ENST00000376883.1|ZFP57|ENSG00000204644.5|ZFP57 zinc finger protein
hg19_v2_chr2_+_237476419_237476451	0.145013	GLI2	ENST00000447924.1|ACKR3|ENSG00000144476.5|atypical chemokine receptor 3
hg19_v2_chr21_-_40555393_40555419	0.144853	GLI2	ENST00000380900.2|PSMG1|ENSG00000183527.7|proteasome (prosome, macropain) assembly chaperone 1
hg19_v2_chr14_-_75530693_75530761	0.144407	GLI2	ENST00000555135.1|ACYP1|ENSG00000119640.4|acylphosphatase 1, erythrocyte (common) type 	ENST00000357971.3|ACYP1|ENSG00000119640.4|acylphosphatase 1, erythrocyte (common) type 	ENST00000553302.1|ACYP1|ENSG00000119640.4|acylphosphatase 1, erythrocyte (common) type 	ENST00000555694.1|ACYP1|ENSG00000119640.4|acylphosphatase 1, erythrocyte (common) type 	ENST00000238618.3|ACYP1|ENSG00000119640.4|acylphosphatase 1, erythrocyte (common) type
hg19_v2_chr5_+_149340282_149340336	0.144231	GLI2	ENST00000286298.4|SLC26A2|ENSG00000155850.7|solute carrier family 26 (anion exchanger), member 2
hg19_v2_chr21_-_45079341_45079400	0.142919	GLI2	ENST00000443485.1|HSF2BP|ENSG00000160207.4|heat shock transcription factor 2 binding protein 	ENST00000291560.2|HSF2BP|ENSG00000160207.4|heat shock transcription factor 2 binding protein
hg19_v2_chr1_-_157108266_157108347	0.141888	GLI2	ENST00000326786.4|ETV3|ENSG00000117036.7|ets variant 3
hg19_v2_chr6_+_26204825_26204858	0.141837	GLI2	ENST00000360441.4|HIST1H4E|ENSG00000198518.5|histone cluster 1, H4e
hg19_v2_chr16_+_31885079_31885165	0.141808	GLI2	ENST00000300870.10|ZNF267|ENSG00000185947.10|zinc finger protein 267 	ENST00000394846.3|ZNF267|ENSG00000185947.10|zinc finger protein 267
hg19_v2_chr8_+_94929077_94929106	0.141719	GLI2	ENST00000297598.4|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000520614.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr13_-_36871886_36872023	0.141576	GLI2	ENST00000491049.2|CCDC169|ENSG00000242715.3|coiled-coil domain containing 169 	ENST00000503173.1|CCDC169|ENSG00000242715.3|coiled-coil domain containing 169 	ENST00000239860.6|CCDC169|ENSG00000242715.3|coiled-coil domain containing 169 	ENST00000379862.2|CCDC169|ENSG00000242715.3|coiled-coil domain containing 169 	ENST00000239859.7|CCDC169|ENSG00000242715.3|coiled-coil domain containing 169 	ENST00000379864.2|CCDC169|ENSG00000242715.3|coiled-coil domain containing 169 	ENST00000510088.1|CCDC169|ENSG00000242715.3|coiled-coil domain containing 169 	ENST00000554962.1|SOHLH2|ENSG00000120669.11|spermatogenesis and oogenesis specific basic helix-loop-helix 2 	ENST00000511166.1|CCDC169-SOHLH2|ENSG00000250709.1|CCDC169-SOHLH2 readthrough
hg19_v2_chr9_+_78505581_78505621	0.140429	GLI2	ENST00000376767.3|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5 	ENST00000376752.4|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5
hg19_v2_chr7_+_64363625_64363667	0.139948	GLI2	ENST00000476120.1|ZNF273|ENSG00000198039.7|zinc finger protein 273 	ENST00000319636.5|ZNF273|ENSG00000198039.7|zinc finger protein 273 	ENST00000545510.1|ZNF273|ENSG00000198039.7|zinc finger protein 273
hg19_v2_chr1_+_1217489_1217576	0.138687	GLI2	ENST00000325425.8|SCNN1D|ENSG00000162572.15|sodium channel, non-voltage-gated 1, delta subunit 	ENST00000400928.3|SCNN1D|ENSG00000162572.15|sodium channel, non-voltage-gated 1, delta subunit
hg19_v2_chr2_+_11295498_11295610	0.137953	GLI2	ENST00000295083.3|PQLC3|ENSG00000162976.8|PQ loop repeat containing 3 	ENST00000441908.2|PQLC3|ENSG00000162976.8|PQ loop repeat containing 3
hg19_v2_chr5_-_89825328_89825422	0.137888	GLI2	ENST00000500869.2|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000315948.6|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000509384.1|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3
hg19_v2_chr10_+_32735177_32735315	0.137648	GLI2	ENST00000545067.1|CCDC7|ENSG00000216937.7|coiled-coil domain containing 7
hg19_v2_chr17_+_7184986_7185076	0.137413	GLI2	ENST00000317370.8|SLC2A4|ENSG00000181856.10|solute carrier family 2 (facilitated glucose transporter), member 4 	ENST00000571308.1|SLC2A4|ENSG00000181856.10|solute carrier family 2 (facilitated glucose transporter), member 4
hg19_v2_chr16_+_56691911_56691929	0.136805	GLI2	ENST00000568475.1|MT1F|ENSG00000198417.5|metallothionein 1F
hg19_v2_chr16_+_9185450_9185516	0.136775	GLI2	ENST00000327827.7|C16orf72|ENSG00000182831.7|chromosome 16 open reading frame 72
hg19_v2_chrX_-_78622805_78622877	0.136723	GLI2	ENST00000373298.2|ITM2A|ENSG00000078596.6|integral membrane protein 2A
hg19_v2_chr9_-_130742792_130742821	0.136483	GLI2	ENST00000373095.1|FAM102A|ENSG00000167106.7|family with sequence similarity 102, member A
hg19_v2_chr1_-_41487383_41487402	0.136154	GLI2	ENST00000302946.8|SLFNL1|ENSG00000171790.11|schlafen-like 1 	ENST00000372613.2|SLFNL1|ENSG00000171790.11|schlafen-like 1 	ENST00000439569.2|SLFNL1|ENSG00000171790.11|schlafen-like 1 	ENST00000397197.2|SLFNL1|ENSG00000171790.11|schlafen-like 1
hg19_v2_chr4_+_95128996_95129056	0.135526	GLI2	ENST00000457823.2|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr6_+_116892530_116892592	0.135059	GLI2	ENST00000466444.2|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000368590.5|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000392526.1|RWDD1|ENSG00000111832.8|RWD domain containing 1
hg19_v2_chr17_-_34122596_34122711	0.134615	GLI2	ENST00000250144.8|MMP28|ENSG00000129270.11|matrix metallopeptidase 28
hg19_v2_chr10_-_101989315_101989376	0.134303	GLI2	ENST00000370397.7|CHUK|ENSG00000213341.6|conserved helix-loop-helix ubiquitous kinase
hg19_v2_chr19_-_58874112_58874214	0.134092	GLI2	ENST00000311044.3|ZNF497|ENSG00000174586.6|zinc finger protein 497 	ENST00000595763.1|ZNF497|ENSG00000174586.6|zinc finger protein 497 	ENST00000425453.3|ZNF497|ENSG00000174586.6|zinc finger protein 497
hg19_v2_chrX_-_15402498_15402515	0.133925	GLI2	ENST00000297904.3|FIGF|ENSG00000165197.4|c-fos induced growth factor (vascular endothelial growth factor D)
hg19_v2_chr1_+_109102652_109102728	0.133268	GLI2	ENST00000370035.3|FAM102B|ENSG00000162636.11|family with sequence similarity 102, member B 	ENST00000405454.1|FAM102B|ENSG00000162636.11|family with sequence similarity 102, member B
hg19_v2_chr18_+_56531584_56531646	0.133056	GLI2	ENST00000590287.1|ZNF532|ENSG00000074657.9|zinc finger protein 532
hg19_v2_chr11_+_117103441_117103452	0.132796	GLI2	ENST00000531287.1|RNF214|ENSG00000167257.6|ring finger protein 214 	ENST00000531452.1|RNF214|ENSG00000167257.6|ring finger protein 214
hg19_v2_chr3_+_11314072_11314098	0.132785	GLI2	ENST00000444619.1|ATG7|ENSG00000197548.8|autophagy related 7
hg19_v2_chr19_-_13947099_13947104	0.132482	GLI2	ENST00000587762.1|MIR24-2|ENSG00000267519.2|microRNA 24-2
hg19_v2_chr16_-_28303360_28303393	0.13237	GLI2	ENST00000501520.1|RP11-57A19.2|ENSG00000246465.1|RP11-57A19.2
hg19_v2_chr15_+_52311398_52311461	0.131646	GLI2	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr3_+_35681081_35681099	0.131561	GLI2	ENST00000428373.1|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa
hg19_v2_chr16_+_89228757_89228790	0.13144	GLI2	ENST00000565008.1|LINC00304|ENSG00000180422.3|long intergenic non-protein coding RNA 304
hg19_v2_chr10_+_104474207_104474297	0.131178	GLI2	ENST00000602831.1|SFXN2|ENSG00000156398.8|sideroflexin 2 	ENST00000369893.5|SFXN2|ENSG00000156398.8|sideroflexin 2
hg19_v2_chr20_+_48599506_48599536	0.130659	GLI2	ENST00000244050.2|SNAI1|ENSG00000124216.3|snail family zinc finger 1
hg19_v2_chr4_+_72053017_72053044	0.130512	GLI2	ENST00000351898.6|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr3_-_197300194_197300219	0.130091	GLI2	ENST00000358186.2|BDH1|ENSG00000161267.7|3-hydroxybutyrate dehydrogenase, type 1 	ENST00000431056.1|BDH1|ENSG00000161267.7|3-hydroxybutyrate dehydrogenase, type 1
hg19_v2_chr17_-_30186328_30186356	0.130029	GLI2	ENST00000302362.6|COPRS|ENSG00000172301.6|coordinator of PRMT5, differentiation stimulator
hg19_v2_chr21_-_47613673_47613673	0.129975	GLI2	ENST00000594486.1|AP001468.1|ENSG00000235878.4|Protein LOC101060037
hg19_v2_chr13_-_60738003_60738121	0.129581	GLI2	ENST00000400330.1|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3 	ENST00000400324.4|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3
hg19_v2_chr19_+_14444525_14444559	0.129346	GLI2	ENST00000588275.1|CTC-548K16.1|ENSG00000267147.1|CTC-548K16.1
hg19_v2_chr19_-_13030071_13030115	0.128896	GLI2	ENST00000293695.7|SYCE2|ENSG00000161860.7|synaptonemal complex central element protein 2
hg19_v2_chr13_-_60737898_60737910	0.128443	GLI2	ENST00000377908.2|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3 	ENST00000400319.1|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3 	ENST00000400320.1|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3 	ENST00000267215.4|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3
hg19_v2_chr19_-_49540073_49540152	0.128163	GLI2	ENST00000301407.7|CGB1|ENSG00000267631.3|chorionic gonadotropin, beta polypeptide 1 	ENST00000604577.1|CTB-60B18.6|ENSG00000267335.2|Choriogonadotropin subunit beta variant 1; Uncharacterized protein  	ENST00000591656.1|CTB-60B18.6|ENSG00000267335.2|Choriogonadotropin subunit beta variant 1; Uncharacterized protein  	ENST00000601167.1|CGB1|ENSG00000267631.3|chorionic gonadotropin, beta polypeptide 1
hg19_v2_chr15_-_49447835_49447858	0.12808	GLI2	ENST00000388901.5|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000299259.6|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chr11_-_17099194_17099334	0.127667	GLI2	ENST00000533969.1|RPS13|ENSG00000110700.2|ribosomal protein S13 	ENST00000228140.2|RPS13|ENSG00000110700.2|ribosomal protein S13 	ENST00000525634.1|RPS13|ENSG00000110700.2|ribosomal protein S13
hg19_v2_chr5_+_98109322_98109350	0.12697	GLI2	ENST00000513185.1|RGMB|ENSG00000174136.7|repulsive guidance molecule family member b
hg19_v2_chr19_-_11039188_11039204	0.126882	GLI2	ENST00000588347.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2
hg19_v2_chr8_-_86132568_86132650	0.126685	GLI2	ENST00000321777.5|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000458398.2|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000431163.2|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000417663.2|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000524353.1|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000421308.2|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000545322.1|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000518562.1|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59
hg19_v2_chr16_+_67195592_67195762	0.126576	GLI2	ENST00000519378.1|FBXL8|ENSG00000135722.4|F-box and leucine-rich repeat protein 8
hg19_v2_chr10_+_105314881_105314989	0.125837	GLI2	ENST00000437579.1|NEURL|ENSG00000107954.6|neuralized E3 ubiquitin protein ligase 1
hg19_v2_chr5_-_89770582_89770603	0.125754	GLI2	ENST00000316610.6|MBLAC2|ENSG00000176055.9|metallo-beta-lactamase domain containing 2
hg19_v2_chr22_-_20255212_20255212	0.125541	GLI2	ENST00000416372.1|RTN4R|ENSG00000040608.9|reticulon 4 receptor
hg19_v2_chr5_+_169758393_169758440	0.124994	GLI2	ENST00000521471.1|CTB-114C7.3|ENSG00000235172.3|CTB-114C7.3	ENST00000518357.1|CTB-114C7.3|ENSG00000235172.3|CTB-114C7.3	ENST00000436248.3|CTB-114C7.3|ENSG00000235172.3|CTB-114C7.3
hg19_v2_chrX_-_107019181_107019488	0.124848	GLI2	ENST00000315660.4|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372384.2|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000502650.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000506724.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr1_-_21978312_21978363	0.123105	GLI2	ENST00000359708.4|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein 	ENST00000290101.4|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein
hg19_v2_chr19_+_4969116_4969143	0.122302	GLI2	ENST00000588337.1|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000159111.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000381759.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B
hg19_v2_chr8_+_74888417_74888485	0.122294	GLI2	ENST00000517439.1|TMEM70|ENSG00000175606.6|transmembrane protein 70 	ENST00000312184.5|TMEM70|ENSG00000175606.6|transmembrane protein 70
hg19_v2_chr11_-_61124266_61124283	0.121201	GLI2	ENST00000539890.1|CYB561A3|ENSG00000162144.5|cytochrome b561 family, member A3
hg19_v2_chr12_-_132690337_132690347	0.121067	GLI2	ENST00000541995.1|GALNT9|ENSG00000182870.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9) 	ENST00000542942.1|GALNT9|ENSG00000182870.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)
hg19_v2_chr1_-_86861936_86862023	0.120769	GLI2	ENST00000394733.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000359242.3|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000294678.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000479890.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000317336.7|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000370567.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000394731.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000478286.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000370566.3|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like
hg19_v2_chr19_+_17638041_17638055	0.12062	GLI2	ENST00000601861.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C
hg19_v2_chr6_-_75994025_75994057	0.120563	GLI2	ENST00000518161.1|TMEM30A|ENSG00000112697.11|transmembrane protein 30A
hg19_v2_chr16_+_72088376_72088537	0.120235	GLI2	ENST00000570083.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000355906.5|HP|ENSG00000257017.4|haptoglobin 	ENST00000398131.2|HP|ENSG00000257017.4|haptoglobin 	ENST00000569639.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000356967.5|HPR|ENSG00000261701.2|haptoglobin-related protein 	ENST00000564499.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000357763.4|HP|ENSG00000257017.4|haptoglobin 	ENST00000562526.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000565574.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000568417.2|HP|ENSG00000257017.4|haptoglobin
hg19_v2_chr3_+_44626359_44626387	0.119915	GLI2	ENST00000412641.1|ZNF197|ENSG00000186448.10|zinc finger protein 197
hg19_v2_chr22_-_21482046_21482046	0.119878	GLI2	ENST00000419447.1|POM121L7|ENSG00000239511.1|POM121 transmembrane nucleoporin-like 7
hg19_v2_chr11_+_107879459_107879702	0.119854	GLI2	ENST00000393094.2|CUL5|ENSG00000166266.9|cullin 5
hg19_v2_chr12_+_132568814_132569025	0.119786	GLI2	ENST00000454179.2|EP400NL|ENSG00000185684.8|EP400 N-terminal like 	ENST00000389560.2|EP400NL|ENSG00000185684.8|EP400 N-terminal like 	ENST00000443539.2|EP400NL|ENSG00000185684.8|EP400 N-terminal like 	ENST00000392352.1|EP400NL|ENSG00000185684.8|EP400 N-terminal like
hg19_v2_chr8_-_145013711_145013786	0.118704	GLI2	ENST00000345136.3|PLEC|ENSG00000178209.10|plectin
hg19_v2_chr22_-_46450024_46450110	0.118698	GLI2	ENST00000396008.2|C22orf26|ENSG00000182257.5|chromosome 22 open reading frame 26 	ENST00000333761.1|C22orf26|ENSG00000182257.5|chromosome 22 open reading frame 26
hg19_v2_chr21_-_46330545_46330741	0.118571	GLI2	ENST00000320216.6|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) 	ENST00000397852.1|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
hg19_v2_chr4_-_83483360_83483386	0.117989	GLI2	ENST00000449862.2|TMEM150C|ENSG00000249242.3|transmembrane protein 150C
hg19_v2_chr22_-_31688381_31688418	0.117464	GLI2	ENST00000487265.2|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1
hg19_v2_chr12_-_13529642_13529664	0.117025	GLI2	ENST00000318426.2|C12orf36|ENSG00000180861.5|chromosome 12 open reading frame 36
hg19_v2_chr14_+_96968707_96968788	0.116723	GLI2	ENST00000216277.8|PAPOLA|ENSG00000090060.13|poly(A) polymerase alpha 	ENST00000557320.1|PAPOLA|ENSG00000090060.13|poly(A) polymerase alpha 	ENST00000557471.1|PAPOLA|ENSG00000090060.13|poly(A) polymerase alpha
hg19_v2_chr10_-_120938303_120938345	0.116655	GLI2	ENST00000356951.3|PRDX3|ENSG00000165672.5|peroxiredoxin 3 	ENST00000298510.2|PRDX3|ENSG00000165672.5|peroxiredoxin 3
hg19_v2_chr13_+_85937736_85937755	0.115934	GLI2	ENST00000424926.2|LINC00351|ENSG00000226317.2|long intergenic non-protein coding RNA 351
hg19_v2_chr17_+_40274756_40274831	0.115805	GLI2	ENST00000355067.3|HSPB9|ENSG00000197723.3|heat shock protein, alpha-crystallin-related, B9
hg19_v2_chr7_-_960521_960533	0.115443	GLI2	ENST00000437486.1|ADAP1|ENSG00000105963.9|ArfGAP with dual PH domains 1
hg19_v2_chr1_-_95285652_95285719	0.114618	GLI2	ENST00000442418.1|LINC01057|ENSG00000224081.3|long intergenic non-protein coding RNA 1057
hg19_v2_chr12_-_57882498_57882509	0.114592	GLI2	ENST00000550288.1|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9
hg19_v2_chr3_-_155524049_155524140	0.112894	GLI2	ENST00000534941.1|C3orf33|ENSG00000174928.11|chromosome 3 open reading frame 33 	ENST00000340171.2|C3orf33|ENSG00000174928.11|chromosome 3 open reading frame 33
hg19_v2_chr5_+_78532003_78532017	0.112374	GLI2	ENST00000396137.4|JMY|ENSG00000152409.8|junction mediating and regulatory protein, p53 cofactor
hg19_v2_chr7_-_42971759_42971822	0.112302	GLI2	ENST00000538645.1|PSMA2|ENSG00000106588.6|proteasome (prosome, macropain) subunit, alpha type, 2 	ENST00000445517.1|PSMA2|ENSG00000106588.6|proteasome (prosome, macropain) subunit, alpha type, 2 	ENST00000223321.4|PSMA2|ENSG00000106588.6|proteasome (prosome, macropain) subunit, alpha type, 2
hg19_v2_chr12_+_69202975_69203013	0.112082	GLI2	ENST00000544561.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000393410.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000299252.4|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000360430.2|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000517852.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000545204.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000393413.3|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000350057.5|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000348801.2|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000478070.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase
hg19_v2_chr16_+_53088885_53088961	0.111873	GLI2	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr11_+_13690200_13690244	0.111771	GLI2	ENST00000354817.3|FAR1|ENSG00000197601.8|fatty acyl CoA reductase 1
hg19_v2_chr6_-_32784687_32784839	0.111629	GLI2	ENST00000447394.1|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta 	ENST00000438763.2|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta
hg19_v2_chr1_+_59250815_59250848	0.110045	GLI2	ENST00000544621.1|RP4-794H19.2|ENSG00000234807.4|long intergenic non-protein coding RNA 1135 	ENST00000419531.2|RP4-794H19.2|ENSG00000234807.4|long intergenic non-protein coding RNA 1135
hg19_v2_chr12_-_48099773_48099844	0.10996	GLI2	ENST00000432584.3|RPAP3|ENSG00000005175.5|RNA polymerase II associated protein 3 	ENST00000005386.3|RPAP3|ENSG00000005175.5|RNA polymerase II associated protein 3
hg19_v2_chr1_+_47799446_47799493	0.10919	GLI2	ENST00000371873.5|CMPK1|ENSG00000162368.9|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg19_v2_chr1_+_6845578_6845591	0.108948	GLI2	ENST00000467404.2|CAMTA1|ENSG00000171735.14|calmodulin binding transcription activator 1 	ENST00000439411.2|CAMTA1|ENSG00000171735.14|calmodulin binding transcription activator 1
hg19_v2_chr1_-_153599732_153599803	0.108763	GLI2	ENST00000392623.1|S100A13|ENSG00000189171.9|S100 calcium binding protein A13
hg19_v2_chr9_+_70971815_70971841	0.108168	GLI2	ENST00000396392.1|PGM5|ENSG00000154330.8|phosphoglucomutase 5 	ENST00000396396.1|PGM5|ENSG00000154330.8|phosphoglucomutase 5
hg19_v2_chrX_-_152989798_152990152	0.108022	GLI2	ENST00000441714.1|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31 	ENST00000442093.1|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31 	ENST00000429550.1|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31 	ENST00000345046.6|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31
hg19_v2_chr21_+_38445539_38445596	0.107875	GLI2	ENST00000418766.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3 	ENST00000450533.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3 	ENST00000438055.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3 	ENST00000355666.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3 	ENST00000540756.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3 	ENST00000399010.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3
hg19_v2_chr11_+_101918153_101918198	0.107366	GLI2	ENST00000434758.2|C11orf70|ENSG00000137691.8|chromosome 11 open reading frame 70 	ENST00000526781.1|C11orf70|ENSG00000137691.8|chromosome 11 open reading frame 70 	ENST00000534360.1|C11orf70|ENSG00000137691.8|chromosome 11 open reading frame 70
hg19_v2_chr7_-_91875358_91875480	0.106861	GLI2	ENST00000458177.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394507.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000340022.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000444960.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing
hg19_v2_chr8_+_61822605_61822618	0.10667	GLI2	ENST00000526936.1|AC022182.1|ENSG00000254777.1|AC022182.1
hg19_v2_chr19_-_17571613_17571693	0.106541	GLI2	ENST00000594663.1|CTD-2521M24.10|ENSG00000269035.1|Uncharacterized protein
hg19_v2_chr2_+_183989157_183989179	0.105713	GLI2	ENST00000541912.1|NUP35|ENSG00000163002.8|nucleoporin 35kDa
hg19_v2_chr22_+_20905286_20905316	0.105355	GLI2	ENST00000428629.1|MED15|ENSG00000099917.13|mediator complex subunit 15
hg19_v2_chr11_+_537494_537537	0.104997	GLI2	ENST00000270115.7|LRRC56|ENSG00000161328.10|leucine rich repeat containing 56
hg19_v2_chr19_+_44220162_44220214	0.10452	GLI2	ENST00000244314.5|IRGC|ENSG00000124449.6|immunity-related GTPase family, cinema
hg19_v2_chr11_+_111957497_111957623	0.104467	GLI2	ENST00000375549.3|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000528182.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000528048.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000528021.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000526592.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000525291.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein
hg19_v2_chr4_-_82393052_82393075	0.104403	GLI2	ENST00000335927.7|RASGEF1B|ENSG00000138670.12|RasGEF domain family, member 1B 	ENST00000504863.1|RASGEF1B|ENSG00000138670.12|RasGEF domain family, member 1B 	ENST00000264400.2|RASGEF1B|ENSG00000138670.12|RasGEF domain family, member 1B
hg19_v2_chr12_-_48099754_48099769	0.104188	GLI2	ENST00000380650.4|RPAP3|ENSG00000005175.5|RNA polymerase II associated protein 3
hg19_v2_chr14_+_74417192_74417227	0.103998	GLI2	ENST00000554320.1|COQ6|ENSG00000119723.11|coenzyme Q6 monooxygenase
hg19_v2_chr14_+_100531615_100531705	0.10348	GLI2	ENST00000392920.3|EVL|ENSG00000196405.8|Enah/Vasp-like
hg19_v2_chr9_-_95298314_95298340	0.103046	GLI2	ENST00000344604.5|ECM2|ENSG00000106823.8|extracellular matrix protein 2, female organ and adipocyte specific 	ENST00000375540.1|ECM2|ENSG00000106823.8|extracellular matrix protein 2, female organ and adipocyte specific
hg19_v2_chr3_-_169899504_169899542	0.101654	GLI2	ENST00000474275.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000484931.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000494943.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000497658.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000465896.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000475729.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000495893.2|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000481639.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000467570.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000466189.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila)
hg19_v2_chr10_+_120863587_120863631	0.10107	GLI2	ENST00000535029.1|FAM45A|ENSG00000119979.11|family with sequence similarity 45, member A 	ENST00000361432.2|FAM45A|ENSG00000119979.11|family with sequence similarity 45, member A 	ENST00000544016.1|FAM45A|ENSG00000119979.11|family with sequence similarity 45, member A
hg19_v2_chr2_-_42180940_42180951	0.101038	GLI2	ENST00000378711.2|C2orf91|ENSG00000205086.5|chromosome 2 open reading frame 91
hg19_v2_chr3_-_10052849_10052867	0.101031	GLI2	ENST00000437616.1|AC022007.5|ENSG00000206567.5|AC022007.5	ENST00000429065.2|AC022007.5|ENSG00000206567.5|AC022007.5
hg19_v2_chr2_+_219283815_219283853	0.100949	GLI2	ENST00000248444.5|VIL1|ENSG00000127831.6|villin 1 	ENST00000454069.1|VIL1|ENSG00000127831.6|villin 1 	ENST00000392114.2|VIL1|ENSG00000127831.6|villin 1
hg19_v2_chr19_-_29218538_29218684	0.0996945	GLI2	ENST00000592347.1|AC005307.3|ENSG00000267243.1|AC005307.3	ENST00000586528.1|AC005307.3|ENSG00000267243.1|AC005307.3
hg19_v2_chr11_-_64815333_64815409	0.0996936	GLI2	ENST00000533842.1|NAALADL1|ENSG00000168060.10|N-acetylated alpha-linked acidic dipeptidase-like 1 	ENST00000532802.1|NAALADL1|ENSG00000168060.10|N-acetylated alpha-linked acidic dipeptidase-like 1 	ENST00000530139.1|NAALADL1|ENSG00000168060.10|N-acetylated alpha-linked acidic dipeptidase-like 1 	ENST00000526516.1|NAALADL1|ENSG00000168060.10|N-acetylated alpha-linked acidic dipeptidase-like 1
hg19_v2_chr1_+_47799542_47799624	0.0993819	GLI2	ENST00000471289.2|CMPK1|ENSG00000162368.9|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic 	ENST00000450808.2|CMPK1|ENSG00000162368.9|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg19_v2_chrX_+_103411189_103411301	0.0993526	GLI2	ENST00000493442.1|FAM199X|ENSG00000123575.8|family with sequence similarity 199, X-linked
hg19_v2_chr16_-_23724518_23724568	0.0988843	GLI2	ENST00000457008.2|ERN2|ENSG00000134398.8|endoplasmic reticulum to nucleus signaling 2
hg19_v2_chr12_-_64784471_64784503	0.0985194	GLI2	ENST00000333722.5|C12orf56|ENSG00000185306.8|chromosome 12 open reading frame 56
hg19_v2_chr17_-_77925806_77925817	0.0982301	GLI2	ENST00000574241.2|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16
hg19_v2_chr2_+_128177253_128177288	0.0979836	GLI2	ENST00000427769.1|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa)
hg19_v2_chr3_-_107809816_107809885	0.0975463	GLI2	ENST00000361309.5|CD47|ENSG00000196776.10|CD47 molecule 	ENST00000355354.7|CD47|ENSG00000196776.10|CD47 molecule
hg19_v2_chr19_-_30199516_30199555	0.0968184	GLI2	ENST00000591243.1|C19orf12|ENSG00000131943.13|chromosome 19 open reading frame 12
hg19_v2_chr12_+_6881678_6881707	0.0967807	GLI2	ENST00000441671.2|LAG3|ENSG00000089692.4|lymphocyte-activation gene 3 	ENST00000203629.2|LAG3|ENSG00000089692.4|lymphocyte-activation gene 3
hg19_v2_chr6_-_128222103_128222226	0.0965393	GLI2	ENST00000434358.1|THEMIS|ENSG00000172673.6|thymocyte selection associated 	ENST00000543064.1|THEMIS|ENSG00000172673.6|thymocyte selection associated 	ENST00000368248.2|THEMIS|ENSG00000172673.6|thymocyte selection associated
hg19_v2_chr9_+_15552867_15552907	0.0963448	GLI2	ENST00000535968.1|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr2_+_48541776_48541874	0.0962943	GLI2	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr3_-_38691119_38691203	0.0962653	GLI2	ENST00000333535.4|SCN5A|ENSG00000183873.11|sodium channel, voltage-gated, type V, alpha subunit 	ENST00000413689.1|SCN5A|ENSG00000183873.11|sodium channel, voltage-gated, type V, alpha subunit 	ENST00000443581.1|SCN5A|ENSG00000183873.11|sodium channel, voltage-gated, type V, alpha subunit 	ENST00000425664.1|SCN5A|ENSG00000183873.11|sodium channel, voltage-gated, type V, alpha subunit 	ENST00000451551.2|SCN5A|ENSG00000183873.11|sodium channel, voltage-gated, type V, alpha subunit
hg19_v2_chr9_+_126118449_126118539	0.0962281	GLI2	ENST00000359999.3|CRB2|ENSG00000148204.7|crumbs homolog 2 (Drosophila) 	ENST00000373631.3|CRB2|ENSG00000148204.7|crumbs homolog 2 (Drosophila)
hg19_v2_chr9_+_15553055_15553101	0.0961783	GLI2	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr19_-_48823332_48823332	0.0959019	GLI2	ENST00000315396.7|CCDC114|ENSG00000105479.11|coiled-coil domain containing 114
hg19_v2_chr2_-_224702740_224702761	0.0957681	GLI2	ENST00000444408.1|AP1S3|ENSG00000152056.12|adaptor-related protein complex 1, sigma 3 subunit
hg19_v2_chr3_+_23958632_23958651	0.0953127	GLI2	ENST00000412097.1|RPL15|ENSG00000174748.14|ribosomal protein L15 	ENST00000415719.1|RPL15|ENSG00000174748.14|ribosomal protein L15 	ENST00000435882.1|RPL15|ENSG00000174748.14|ribosomal protein L15
hg19_v2_chr7_-_229557_229557	0.0952716	GLI2	ENST00000514988.1|AC145676.2|ENSG00000249852.1|Uncharacterized protein
hg19_v2_chr17_+_6544356_6544363	0.0943846	GLI2	ENST00000574838.1|TXNDC17|ENSG00000129235.6|thioredoxin domain containing 17
hg19_v2_chr6_+_142468361_142468382	0.0943043	GLI2	ENST00000367630.4|VTA1|ENSG00000009844.11|vesicle (multivesicular body) trafficking 1
hg19_v2_chr3_+_23958470_23958630	0.0931491	GLI2	ENST00000434031.2|RPL15|ENSG00000174748.14|ribosomal protein L15 	ENST00000413699.1|RPL15|ENSG00000174748.14|ribosomal protein L15 	ENST00000456530.2|RPL15|ENSG00000174748.14|ribosomal protein L15
hg19_v2_chr21_-_44751903_44751935	0.093063	GLI2	ENST00000450205.1|LINC00322|ENSG00000237864.1|long intergenic non-protein coding RNA 322
hg19_v2_chr15_-_75917955_75918016	0.0928119	GLI2	ENST00000568162.1|SNUPN|ENSG00000169371.9|snurportin 1 	ENST00000563875.1|SNUPN|ENSG00000169371.9|snurportin 1
hg19_v2_chr3_-_45957088_45957112	0.0927746	GLI2	ENST00000539217.1|LZTFL1|ENSG00000163818.12|leucine zipper transcription factor-like 1
hg19_v2_chr11_+_64052692_64052747	0.0927427	GLI2	ENST00000377702.4|GPR137|ENSG00000173264.9|G protein-coupled receptor 137
hg19_v2_chr2_-_136875712_136875735	0.092636	GLI2	ENST00000241393.3|CXCR4|ENSG00000121966.6|chemokine (C-X-C motif) receptor 4
hg19_v2_chr11_-_74109422_74109518	0.0926222	GLI2	ENST00000298198.4|PGM2L1|ENSG00000165434.6|phosphoglucomutase 2-like 1
hg19_v2_chr19_-_17007026_17007026	0.092186	GLI2	ENST00000598792.1|CPAMD8|ENSG00000160111.8|C3 and PZP-like, alpha-2-macroglobulin domain containing 8
hg19_v2_chr7_+_106810165_106810374	0.0921521	GLI2	ENST00000468401.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000497535.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000485846.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr7_-_23053719_23053767	0.0920749	GLI2	ENST00000432176.2|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A 	ENST00000440481.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A
hg19_v2_chr7_+_30185406_30185417	0.0920693	GLI2	ENST00000324489.5|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr4_+_38511367_38511408	0.0918969	GLI2	ENST00000507056.1|RP11-213G21.1|ENSG00000249667.1|RP11-213G21.1
hg19_v2_chr17_+_6544078_6544125	0.0917511	GLI2	ENST00000250101.5|TXNDC17|ENSG00000129235.6|thioredoxin domain containing 17
hg19_v2_chr1_+_201159914_201159958	0.0916284	GLI2	ENST00000335211.4|IGFN1|ENSG00000163395.12|immunoglobulin-like and fibronectin type III domain containing 1 	ENST00000451870.2|IGFN1|ENSG00000163395.12|immunoglobulin-like and fibronectin type III domain containing 1 	ENST00000295591.8|IGFN1|ENSG00000163395.12|immunoglobulin-like and fibronectin type III domain containing 1
hg19_v2_chr7_+_150076406_150076456	0.0912593	GLI2	ENST00000329630.5|ZNF775|ENSG00000196456.4|zinc finger protein 775
hg19_v2_chr12_+_120933859_120933899	0.0909522	GLI2	ENST00000242577.6|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000548214.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000392508.2|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1
hg19_v2_chr11_+_35222629_35222660	0.090755	GLI2	ENST00000526553.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group)
hg19_v2_chr22_+_20905269_20905278	0.0905526	GLI2	ENST00000457322.1|MED15|ENSG00000099917.13|mediator complex subunit 15
hg19_v2_chr10_-_45496336_45496379	0.090243	GLI2	ENST00000298298.1|C10orf25|ENSG00000165511.4|chromosome 10 open reading frame 25
hg19_v2_chr9_-_20382446_20382493	0.0898947	GLI2	ENST00000380321.1|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
hg19_v2_chr9_+_126131131_126131168	0.0891759	GLI2	ENST00000373629.2|CRB2|ENSG00000148204.7|crumbs homolog 2 (Drosophila)
hg19_v2_chr19_-_36288740_36288814	0.0888512	GLI2	ENST00000564335.1|AC002398.5|ENSG00000225872.2|AC002398.5	ENST00000567313.1|AC002398.5|ENSG00000225872.2|AC002398.5	ENST00000433059.1|AC002398.5|ENSG00000225872.2|AC002398.5
hg19_v2_chr22_+_46731676_46731819	0.088576	GLI2	ENST00000424260.2|TRMU|ENSG00000100416.8|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
hg19_v2_chr1_-_63782888_63782904	0.0885534	GLI2	ENST00000436475.2|LINC00466|ENSG00000224209.2|long intergenic non-protein coding RNA 466
hg19_v2_chr8_-_145642267_145642279	0.088392	GLI2	ENST00000301305.3|SLC39A4|ENSG00000147804.5|solute carrier family 39 (zinc transporter), member 4
hg19_v2_chr10_+_14880364_14880436	0.0881704	GLI2	ENST00000441647.1|HSPA14|ENSG00000187522.9|heat shock 70kDa protein 14
hg19_v2_chr1_+_161195835_161195864	0.0880688	GLI2	ENST00000545897.1|TOMM40L|ENSG00000158882.8|translocase of outer mitochondrial membrane 40 homolog (yeast)-like
hg19_v2_chr6_-_134373732_134373795	0.087722	GLI2	ENST00000275230.5|SLC2A12|ENSG00000146411.5|solute carrier family 2 (facilitated glucose transporter), member 12
hg19_v2_chr19_-_37406923_37406949	0.087588	GLI2	ENST00000520965.1|ZNF829|ENSG00000185869.9|zinc finger protein 829
hg19_v2_chr17_+_74734052_74734157	0.0868096	GLI2	ENST00000590514.1|MFSD11|ENSG00000092931.7|major facilitator superfamily domain containing 11
hg19_v2_chr19_+_44084696_44084790	0.0867757	GLI2	ENST00000562255.1|PINLYP|ENSG00000234465.6|phospholipase A2 inhibitor and LY6/PLAUR domain containing 	ENST00000569031.2|PINLYP|ENSG00000234465.6|phospholipase A2 inhibitor and LY6/PLAUR domain containing
hg19_v2_chr11_-_8986474_8986558	0.0867754	GLI2	ENST00000525069.1|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B
hg19_v2_chr20_-_25062767_25062779	0.0865119	GLI2	ENST00000429762.3|VSX1|ENSG00000100987.10|visual system homeobox 1 	ENST00000444511.2|VSX1|ENSG00000100987.10|visual system homeobox 1 	ENST00000376707.3|VSX1|ENSG00000100987.10|visual system homeobox 1
hg19_v2_chr19_-_7939319_7939358	0.0863707	GLI2	ENST00000539422.1|CTD-3193O13.9|ENSG00000183248.7|Protein FLJ22184
hg19_v2_chr13_-_114103443_114103592	0.0862119	GLI2	ENST00000356501.4|ADPRHL1|ENSG00000153531.8|ADP-ribosylhydrolase like 1 	ENST00000413169.2|ADPRHL1|ENSG00000153531.8|ADP-ribosylhydrolase like 1
hg19_v2_chr16_+_57702099_57702202	0.0858018	GLI2	ENST00000333493.4|GPR97|ENSG00000182885.12|G protein-coupled receptor 97 	ENST00000327655.6|GPR97|ENSG00000182885.12|G protein-coupled receptor 97
hg19_v2_chr19_-_49314169_49314194	0.08577	GLI2	ENST00000597011.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000601681.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial
hg19_v2_chr5_+_76506706_76506787	0.0856294	GLI2	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chr16_+_30194118_30194165	0.085457	GLI2	ENST00000563778.1|CORO1A|ENSG00000102879.11|coronin, actin binding protein, 1A
hg19_v2_chr19_-_2256405_2256428	0.0852864	GLI2	ENST00000300961.6|JSRP1|ENSG00000167476.6|junctional sarcoplasmic reticulum protein 1
hg19_v2_chr19_-_49520338_49520367	0.0850298	GLI2	ENST00000221421.2|LHB|ENSG00000104826.7|luteinizing hormone beta polypeptide
hg19_v2_chr5_+_140718396_140718539	0.0849987	GLI2	ENST00000394576.2|PCDHGA2|ENSG00000081853.13|protocadherin gamma subfamily A, 2
hg19_v2_chr6_-_121655552_121655592	0.0848086	GLI2	ENST00000275159.6|TBC1D32|ENSG00000146350.9|TBC1 domain family, member 32
hg19_v2_chr17_+_45331184_45331263	0.0846529	GLI2	ENST00000559488.1|ITGB3|ENSG00000259207.3|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 	ENST00000571680.1|ITGB3|ENSG00000259207.3|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 	ENST00000435993.2|ITGB3|ENSG00000259207.3|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
hg19_v2_chr22_-_24622080_24622080	0.0846022	GLI2	ENST00000425408.1|GGT5|ENSG00000099998.13|gamma-glutamyltransferase 5
hg19_v2_chr3_-_56717246_56717324	0.0843592	GLI2	ENST00000355628.5|FAM208A|ENSG00000163946.9|family with sequence similarity 208, member A
hg19_v2_chr5_+_175792459_175792513	0.0838844	GLI2	ENST00000310389.5|ARL10|ENSG00000175414.6|ADP-ribosylation factor-like 10
hg19_v2_chrX_-_119603138_119603220	0.0834865	GLI2	ENST00000200639.4|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000371335.4|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000538785.1|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000434600.2|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2
hg19_v2_chr8_+_96146168_96146304	0.0826313	GLI2	ENST00000519516.1|PLEKHF2|ENSG00000175895.3|pleckstrin homology domain containing, family F (with FYVE domain) member 2
hg19_v2_chr3_-_88108212_88108223	0.0824209	GLI2	ENST00000482016.1|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr5_-_177659761_177659832	0.0824043	GLI2	ENST00000308158.5|PHYKPL|ENSG00000175309.10|5-phosphohydroxy-L-lysine phospho-lyase
hg19_v2_chr17_+_56270084_56270098	0.0823191	GLI2	ENST00000225371.5|EPX|ENSG00000121053.5|eosinophil peroxidase
hg19_v2_chr1_-_229478714_229478815	0.0815837	GLI2	ENST00000284617.2|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein
hg19_v2_chrX_+_23682379_23682401	0.0814907	GLI2	ENST00000379349.1|PRDX4|ENSG00000123131.8|peroxiredoxin 4
hg19_v2_chr20_-_55100981_55100981	0.0814424	GLI2	ENST00000243913.4|GCNT7|ENSG00000124091.5|glucosaminyl (N-acetyl) transferase family member 7
hg19_v2_chr16_-_14109841_14109889	0.0809479	GLI2	ENST00000576797.1|CTD-2135D7.5|ENSG00000262097.1|CTD-2135D7.5	ENST00000575424.1|CTD-2135D7.5|ENSG00000262097.1|CTD-2135D7.5
hg19_v2_chr3_-_72496035_72496069	0.0808701	GLI2	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr16_+_56899114_56899127	0.0808603	GLI2	ENST00000566786.1|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3 	ENST00000438926.2|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3 	ENST00000563236.1|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3 	ENST00000262502.5|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3
hg19_v2_chr8_-_90996837_90996944	0.0807398	GLI2	ENST00000519426.1|NBN|ENSG00000104320.9|nibrin 	ENST00000265433.3|NBN|ENSG00000104320.9|nibrin
hg19_v2_chr5_-_850676_850720	0.0807003	GLI2	ENST00000424784.2|ZDHHC11|ENSG00000188818.8|zinc finger, DHHC-type containing 11
hg19_v2_chr17_+_29158962_29159046	0.0803632	GLI2	ENST00000321990.4|ATAD5|ENSG00000176208.4|ATPase family, AAA domain containing 5
hg19_v2_chr11_-_64527425_64527461	0.0801513	GLI2	ENST00000377432.3|PYGM|ENSG00000068976.9|phosphorylase, glycogen, muscle
hg19_v2_chr7_+_150811705_150811765	0.0801483	GLI2	ENST00000335367.3|AGAP3|ENSG00000133612.14|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
hg19_v2_chr9_-_117420052_117420092	0.0798779	GLI2	ENST00000423632.1|RP11-402G3.5|ENSG00000230054.1|RP11-402G3.5
hg19_v2_chr7_+_140396756_140396804	0.0788228	GLI2	ENST00000460088.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000472695.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa
hg19_v2_chr1_-_153585539_153585559	0.0787979	GLI2	ENST00000368706.4|S100A16|ENSG00000188643.6|S100 calcium binding protein A16
hg19_v2_chr16_+_50059182_50059199	0.0779276	GLI2	ENST00000562576.1|CNEP1R1|ENSG00000205423.7|CTD nuclear envelope phosphatase 1 regulatory subunit 1
hg19_v2_chr10_-_103454876_103455016	0.0778867	GLI2	ENST00000331272.7|FBXW4|ENSG00000107829.9|F-box and WD repeat domain containing 4
hg19_v2_chr16_+_57653854_57653968	0.0778315	GLI2	ENST00000568908.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000568909.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000566778.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000561988.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr1_-_47407136_47407154	0.0772429	GLI2	ENST00000462347.1|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11 	ENST00000371905.1|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11 	ENST00000310638.4|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11
hg19_v2_chr21_-_28215332_28215347	0.0766525	GLI2	ENST00000517777.1|ADAMTS1|ENSG00000154734.10|ADAM metallopeptidase with thrombospondin type 1 motif, 1
hg19_v2_chr20_+_44637526_44637554	0.0765876	GLI2	ENST00000372330.3|MMP9|ENSG00000100985.7|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)
hg19_v2_chr6_-_133084580_133084605	0.0762738	GLI2	ENST00000525270.1|VNN2|ENSG00000112303.9|vanin 2 	ENST00000530536.1|VNN2|ENSG00000112303.9|vanin 2 	ENST00000524919.1|VNN2|ENSG00000112303.9|vanin 2
hg19_v2_chr10_-_94333784_94333860	0.0757156	GLI2	ENST00000265986.6|IDE|ENSG00000119912.11|insulin-degrading enzyme
hg19_v2_chr12_+_12223867_12223883	0.0756229	GLI2	ENST00000308721.5|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator)
hg19_v2_chr11_+_832804_832887	0.0754212	GLI2	ENST00000397420.3|CD151|ENSG00000177697.13|CD151 molecule (Raph blood group) 	ENST00000525718.1|CD151|ENSG00000177697.13|CD151 molecule (Raph blood group)
hg19_v2_chr16_-_1538765_1538982	0.0753536	GLI2	ENST00000447419.2|PTX4|ENSG00000251692.3|pentraxin 4, long 	ENST00000440447.2|PTX4|ENSG00000251692.3|pentraxin 4, long
hg19_v2_chr2_-_171571077_171571077	0.0753083	GLI2	ENST00000409786.1|AC007405.2|ENSG00000222033.1|long intergenic non-protein coding RNA 1124
hg19_v2_chr3_-_46759314_46759340	0.075108	GLI2	ENST00000315170.7|PRSS50|ENSG00000206549.8|protease, serine, 50
hg19_v2_chr12_-_110888103_110888212	0.0749621	GLI2	ENST00000426440.1|ARPC3|ENSG00000111229.11|actin related protein 2/3 complex, subunit 3, 21kDa 	ENST00000228825.7|ARPC3|ENSG00000111229.11|actin related protein 2/3 complex, subunit 3, 21kDa
hg19_v2_chr17_+_7487146_7487211	0.0737847	GLI2	ENST00000396501.4|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000584378.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000423172.2|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000579445.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000585217.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000581380.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1
hg19_v2_chr2_+_172290707_172290764	0.0736499	GLI2	ENST00000375255.3|DCAF17|ENSG00000115827.9|DDB1 and CUL4 associated factor 17 	ENST00000539783.1|DCAF17|ENSG00000115827.9|DDB1 and CUL4 associated factor 17
hg19_v2_chr19_-_16284286_16284336	0.0735884	GLI2	ENST00000379859.3|CIB3|ENSG00000141977.5|calcium and integrin binding family member 3 	ENST00000269878.4|CIB3|ENSG00000141977.5|calcium and integrin binding family member 3
hg19_v2_chr1_-_26233423_26233482	0.0732276	GLI2	ENST00000357865.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr3_-_128902729_128902753	0.0729573	GLI2	ENST00000451728.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000446936.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000502976.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000500450.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000441626.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein
hg19_v2_chr14_+_21467414_21467463	0.0727535	GLI2	ENST00000554422.1|SLC39A2|ENSG00000165794.5|solute carrier family 39 (zinc transporter), member 2 	ENST00000298681.4|SLC39A2|ENSG00000165794.5|solute carrier family 39 (zinc transporter), member 2
hg19_v2_chr9_+_136215044_136215086	0.0724093	GLI2	ENST00000323345.6|RPL7A|ENSG00000148303.12|ribosomal protein L7a
hg19_v2_chr1_+_154947148_154947175	0.0723711	GLI2	ENST00000368436.1|CKS1B|ENSG00000173207.8|CDC28 protein kinase regulatory subunit 1B 	ENST00000308987.5|CKS1B|ENSG00000173207.8|CDC28 protein kinase regulatory subunit 1B
hg19_v2_chr21_-_38445297_38445313	0.0722054	GLI2	ENST00000430792.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P 	ENST00000399103.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P
hg19_v2_chrX_-_107334750_107334780	0.0721517	GLI2	ENST00000340200.5|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENST00000372296.1|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENST00000372295.1|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENST00000361815.5|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
hg19_v2_chr10_-_52383644_52383743	0.0721067	GLI2	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr9_+_15553000_15553054	0.0720215	GLI2	ENST00000297641.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr2_+_87769459_87769476	0.07201	GLI2	ENST00000414030.1|LINC00152|ENSG00000222041.6|long intergenic non-protein coding RNA 152 	ENST00000437561.1|LINC00152|ENSG00000222041.6|long intergenic non-protein coding RNA 152
hg19_v2_chr19_+_7069690_7069726	0.0719718	GLI2	ENST00000439035.2|ZNF557|ENSG00000130544.7|zinc finger protein 557
hg19_v2_chr3_-_169482840_169482855	0.0718172	GLI2	ENST00000602385.1|TERC|ENSG00000270141.2|telomerase RNA component
hg19_v2_chr8_-_101157680_101157680	0.071648	GLI2	ENST00000428847.2|FBXO43|ENSG00000156509.9|F-box protein 43
hg19_v2_chr5_+_82373379_82373444	0.0715771	GLI2	ENST00000396027.4|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4 	ENST00000511817.1|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4
hg19_v2_chr21_-_38445011_38445200	0.071432	GLI2	ENST00000464265.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P 	ENST00000399102.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P
hg19_v2_chr15_+_49447947_49448036	0.0712914	GLI2	ENST00000327171.3|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000560654.1|GALK2|ENSG00000156958.10|galactokinase 2
hg19_v2_chr17_+_55333876_55333939	0.0712184	GLI2	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr16_+_1306093_1306134	0.0708793	GLI2	ENST00000211076.3|TPSD1|ENSG00000095917.9|tryptase delta 1
hg19_v2_chr2_+_183989083_183989151	0.070811	GLI2	ENST00000295119.4|NUP35|ENSG00000163002.8|nucleoporin 35kDa
hg19_v2_chr12_+_121088291_121088315	0.0707482	GLI2	ENST00000351200.2|CABP1|ENSG00000157782.5|calcium binding protein 1
hg19_v2_chr2_+_182322070_182322155	0.0707393	GLI2	ENST00000233573.6|ITGA4|ENSG00000115232.9|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)
hg19_v2_chr21_-_40720995_40721126	0.0701005	GLI2	ENST00000380749.5|HMGN1|ENSG00000205581.6|high mobility group nucleosome binding domain 1
hg19_v2_chr12_+_120933904_120933923	0.0700621	GLI2	ENST00000550178.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000550845.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000549989.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000552870.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1
hg19_v2_chr9_+_88556444_88556528	0.0697811	GLI2	ENST00000376040.1|NAA35|ENSG00000135040.11|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
hg19_v2_chr17_-_41116454_41116515	0.0696609	GLI2	ENST00000427569.2|AARSD1|ENSG00000266967.2|alanyl-tRNA synthetase domain containing 1 	ENST00000430739.1|AARSD1|ENSG00000266967.2|alanyl-tRNA synthetase domain containing 1
hg19_v2_chr8_-_1922789_1922822	0.0694122	GLI2	ENST00000521498.1|RP11-439C15.4|ENSG00000253764.1|RP11-439C15.4
hg19_v2_chr21_-_40720974_40720994	0.0693807	GLI2	ENST00000380748.1|HMGN1|ENSG00000205581.6|high mobility group nucleosome binding domain 1
hg19_v2_chr18_-_268019_268064	0.0692174	GLI2	ENST00000261600.6|THOC1|ENSG00000079134.7|THO complex 1
hg19_v2_chr20_+_814349_814375	0.069182	GLI2	ENST00000381941.3|FAM110A|ENSG00000125898.8|family with sequence similarity 110, member A
hg19_v2_chr1_+_244998602_244998646	0.0691263	GLI2	ENST00000411948.2|COX20|ENSG00000203667.5|COX20 cytochrome C oxidase assembly factor
hg19_v2_chr19_-_40562063_40562143	0.0689368	GLI2	ENST00000598845.1|ZNF780B|ENSG00000128000.11|zinc finger protein 780B 	ENST00000593605.1|ZNF780B|ENSG00000128000.11|zinc finger protein 780B 	ENST00000221355.6|ZNF780B|ENSG00000128000.11|zinc finger protein 780B 	ENST00000434248.1|ZNF780B|ENSG00000128000.11|zinc finger protein 780B
hg19_v2_chr10_-_23633720_23633774	0.0688639	GLI2	ENST00000323327.4|C10orf67|ENSG00000179133.7|chromosome 10 open reading frame 67
hg19_v2_chr9_+_33817461_33817565	0.068743	GLI2	ENST00000263228.3|UBE2R2|ENSG00000107341.4|ubiquitin-conjugating enzyme E2R 2
hg19_v2_chr3_+_179280668_179280769	0.0686946	GLI2	ENST00000429709.2|ACTL6A|ENSG00000136518.12|actin-like 6A 	ENST00000450518.2|ACTL6A|ENSG00000136518.12|actin-like 6A 	ENST00000392662.1|ACTL6A|ENSG00000136518.12|actin-like 6A 	ENST00000490364.1|ACTL6A|ENSG00000136518.12|actin-like 6A
hg19_v2_chr17_-_4544960_4544979	0.0686263	GLI2	ENST00000293761.3|ALOX15|ENSG00000161905.8|arachidonate 15-lipoxygenase
hg19_v2_chr17_+_31255165_31255228	0.0685344	GLI2	ENST00000578289.1|TMEM98|ENSG00000006042.7|transmembrane protein 98 	ENST00000439138.1|TMEM98|ENSG00000006042.7|transmembrane protein 98
hg19_v2_chr12_-_132690573_132690704	0.0684065	GLI2	ENST00000397325.2|GALNT9|ENSG00000182870.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9) 	ENST00000538356.1|GALNT9|ENSG00000182870.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)
hg19_v2_chr12_-_56122761_56123004	0.0681147	GLI2	ENST00000552164.1|CD63|ENSG00000135404.7|CD63 molecule 	ENST00000420846.3|CD63|ENSG00000135404.7|CD63 molecule 	ENST00000257857.4|CD63|ENSG00000135404.7|CD63 molecule
hg19_v2_chr15_-_93616892_93616939	0.067939	GLI2	ENST00000556658.1|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a 	ENST00000538818.1|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a 	ENST00000425933.2|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a
hg19_v2_chr4_-_156297919_156297937	0.0679206	GLI2	ENST00000450097.1|MAP9|ENSG00000164114.14|microtubule-associated protein 9
hg19_v2_chr6_+_142468383_142468421	0.0678303	GLI2	ENST00000367621.1|VTA1|ENSG00000009844.11|vesicle (multivesicular body) trafficking 1 	ENST00000452973.2|VTA1|ENSG00000009844.11|vesicle (multivesicular body) trafficking 1
hg19_v2_chr1_-_36185073_36185073	0.0677956	GLI2	ENST00000270815.4|C1orf216|ENSG00000142686.7|chromosome 1 open reading frame 216
hg19_v2_chr19_+_48828582_48828637	0.0677212	GLI2	ENST00000270221.6|EMP3|ENSG00000142227.6|epithelial membrane protein 3 	ENST00000596315.1|EMP3|ENSG00000142227.6|epithelial membrane protein 3
hg19_v2_chr13_+_27825706_27825741	0.0676941	GLI2	ENST00000272274.4|RPL21|ENSG00000122026.6|ribosomal protein L21 	ENST00000319826.4|RPL21|ENSG00000122026.6|ribosomal protein L21 	ENST00000326092.4|RPL21|ENSG00000122026.6|ribosomal protein L21
hg19_v2_chr17_-_79881408_79881423	0.0676119	GLI2	ENST00000392366.3|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G
hg19_v2_chr20_+_18568537_18568585	0.0673816	GLI2	ENST00000377452.3|DTD1|ENSG00000125821.7|D-tyrosyl-tRNA deacylase 1
hg19_v2_chr7_+_100612904_100612904	0.0673063	GLI2	ENST00000379442.3|MUC12|ENSG00000205277.5|mucin 12, cell surface associated 	ENST00000536621.1|MUC12|ENSG00000205277.5|mucin 12, cell surface associated
hg19_v2_chr16_+_1306060_1306088	0.0670408	GLI2	ENST00000397534.2|TPSD1|ENSG00000095917.9|tryptase delta 1
hg19_v2_chr17_-_30185946_30185970	0.0670327	GLI2	ENST00000579741.1|COPRS|ENSG00000172301.6|coordinator of PRMT5, differentiation stimulator
hg19_v2_chr6_+_43968306_43968377	0.0669816	GLI2	ENST00000442114.2|C6orf223|ENSG00000181577.11|chromosome 6 open reading frame 223 	ENST00000336600.5|C6orf223|ENSG00000181577.11|chromosome 6 open reading frame 223 	ENST00000439969.2|C6orf223|ENSG00000181577.11|chromosome 6 open reading frame 223
hg19_v2_chr1_+_27114418_27114518	0.0668819	GLI2	ENST00000078527.4|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V
hg19_v2_chrX_+_115567767_115567790	0.0663759	GLI2	ENST00000371900.4|SLC6A14|ENSG00000087916.7|solute carrier family 6 (amino acid transporter), member 14
hg19_v2_chr4_+_1795508_1795623	0.0661985	GLI2	ENST00000260795.2|FGFR3|ENSG00000068078.13|fibroblast growth factor receptor 3 	ENST00000352904.1|FGFR3|ENSG00000068078.13|fibroblast growth factor receptor 3
hg19_v2_chr1_+_41707996_41708045	0.0658429	GLI2	ENST00000425554.1|RP11-399E6.1|ENSG00000235358.1|RP11-399E6.1
hg19_v2_chr9_-_92020841_92020885	0.0656038	GLI2	ENST00000433650.1|SEMA4D|ENSG00000187764.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
hg19_v2_chr8_+_144371773_144371846	0.0653673	GLI2	ENST00000523891.1|ZNF696|ENSG00000185730.3|zinc finger protein 696
hg19_v2_chr19_-_16045619_16045649	0.0653119	GLI2	ENST00000402119.4|CYP4F11|ENSG00000171903.12|cytochrome P450, family 4, subfamily F, polypeptide 11
hg19_v2_chr19_+_7694623_7694710	0.0650899	GLI2	ENST00000594797.1|PET100|ENSG00000229833.5|PET100 homolog (S. cerevisiae) 	ENST00000456958.3|PET100|ENSG00000229833.5|PET100 homolog (S. cerevisiae) 	ENST00000601406.1|PET100|ENSG00000229833.5|PET100 homolog (S. cerevisiae)
hg19_v2_chr11_-_71751715_71751788	0.0650439	GLI2	ENST00000535947.1|NUMA1|ENSG00000137497.13|nuclear mitotic apparatus protein 1
hg19_v2_chr7_-_95064264_95064510	0.0647515	GLI2	ENST00000536183.1|PON2|ENSG00000105854.8|paraoxonase 2 	ENST00000433091.2|PON2|ENSG00000105854.8|paraoxonase 2 	ENST00000222572.3|PON2|ENSG00000105854.8|paraoxonase 2
hg19_v2_chrX_+_118892545_118892576	0.0647215	GLI2	ENST00000343905.3|SOWAHD|ENSG00000187808.3|sosondowah ankyrin repeat domain family member D
hg19_v2_chr1_-_161207875_161207901	0.0646159	GLI2	ENST00000512372.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000437437.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000442691.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000412844.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000428574.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000505005.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000508740.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000508387.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000504010.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000511676.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000502985.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367981.3|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000515621.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000511944.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000511748.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367984.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367985.3|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr17_+_81037473_81037567	0.0645987	GLI2	ENST00000320095.7|METRNL|ENSG00000176845.8|meteorin, glial cell differentiation regulator-like
hg19_v2_chr14_+_85996471_85996497	0.0641982	GLI2	ENST00000330753.4|FLRT2|ENSG00000185070.6|fibronectin leucine rich transmembrane protein 2
hg19_v2_chr1_-_153599426_153599524	0.0641346	GLI2	ENST00000392622.1|S100A13|ENSG00000189171.9|S100 calcium binding protein A13
hg19_v2_chr3_+_45067659_45067675	0.0640956	GLI2	ENST00000296130.4|CLEC3B|ENSG00000163815.5|C-type lectin domain family 3, member B
hg19_v2_chr4_+_40194609_40194616	0.0639672	GLI2	ENST00000508513.1|RHOH|ENSG00000168421.8|ras homolog family member H
hg19_v2_chr4_-_69083720_69083798	0.0639287	GLI2	ENST00000432593.3|TMPRSS11BNL|ENSG00000226894.3|TMPRSS11B N-terminal like
hg19_v2_chr12_-_2944184_2944209	0.0636376	GLI2	ENST00000337508.4|NRIP2|ENSG00000053702.10|nuclear receptor interacting protein 2
hg19_v2_chr13_+_20532848_20532890	0.0636028	GLI2	ENST00000382874.2|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr7_-_27170352_27170418	0.0635308	GLI2	ENST00000428284.2|HOXA4|ENSG00000197576.9|homeobox A4 	ENST00000360046.5|HOXA4|ENSG00000197576.9|homeobox A4
hg19_v2_chr1_+_244998918_244998975	0.0635155	GLI2	ENST00000366528.3|COX20|ENSG00000203667.5|COX20 cytochrome C oxidase assembly factor
hg19_v2_chr5_-_64920115_64920174	0.0633192	GLI2	ENST00000381018.3|TRIM23|ENSG00000113595.10|tripartite motif containing 23 	ENST00000274327.7|TRIM23|ENSG00000113595.10|tripartite motif containing 23
hg19_v2_chr17_+_55334364_55334412	0.0631874	GLI2	ENST00000322684.3|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2 	ENST00000579590.1|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr8_+_48920960_48921011	0.0629599	GLI2	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chrX_-_141293047_141293082	0.062902	GLI2	ENST00000247452.3|MAGEC2|ENSG00000046774.9|melanoma antigen family C, 2
hg19_v2_chr8_+_94929110_94929167	0.0629013	GLI2	ENST00000520728.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr5_+_82373317_82373375	0.0628073	GLI2	ENST00000282268.3|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4 	ENST00000338635.6|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4
hg19_v2_chr10_+_71389983_71390040	0.0625633	GLI2	ENST00000373279.4|C10orf35|ENSG00000171224.7|chromosome 10 open reading frame 35
hg19_v2_chr9_+_35042205_35042266	0.0624544	GLI2	ENST00000312292.5|C9orf131|ENSG00000174038.8|chromosome 9 open reading frame 131 	ENST00000378745.3|C9orf131|ENSG00000174038.8|chromosome 9 open reading frame 131
hg19_v2_chr9_-_98079154_98079192	0.0621998	GLI2	ENST00000433829.1|FANCC|ENSG00000158169.7|Fanconi anemia, complementation group C
hg19_v2_chr12_+_57388230_57388282	0.0620851	GLI2	ENST00000300098.1|GPR182|ENSG00000166856.1|G protein-coupled receptor 182
hg19_v2_chr7_-_44180673_44180687	0.061898	GLI2	ENST00000457314.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory 	ENST00000447951.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory 	ENST00000431007.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory
hg19_v2_chr9_-_135754164_135754210	0.061871	GLI2	ENST00000298545.3|AK8|ENSG00000165695.5|adenylate kinase 8
hg19_v2_chrX_-_48823165_48823165	0.0618099	GLI2	ENST00000419374.1|KCND1|ENSG00000102057.5|potassium voltage-gated channel, Shal-related subfamily, member 1
hg19_v2_chr11_+_18230727_18230755	0.0615428	GLI2	ENST00000527059.1|RP11-113D6.10|ENSG00000189332.4|Putative mitochondrial carrier protein LOC494141
hg19_v2_chr3_+_160939050_160939116	0.0613004	GLI2	ENST00000493066.1|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor 	ENST00000351193.2|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor 	ENST00000472947.1|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor 	ENST00000463518.1|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor
hg19_v2_chr12_-_56122426_56122458	0.0612829	GLI2	ENST00000551173.1|CD63|ENSG00000135404.7|CD63 molecule
hg19_v2_chr1_+_145726886_145726918	0.0611268	GLI2	ENST00000443667.1|PDZK1|ENSG00000174827.9|PDZ domain containing 1
hg19_v2_chr1_-_38273840_38273888	0.0610943	GLI2	ENST00000373044.2|YRDC|ENSG00000196449.3|yrdC N(6)-threonylcarbamoyltransferase domain containing
hg19_v2_chr20_+_814377_814452	0.0610507	GLI2	ENST00000304189.2|FAM110A|ENSG00000125898.8|family with sequence similarity 110, member A 	ENST00000381939.1|FAM110A|ENSG00000125898.8|family with sequence similarity 110, member A
hg19_v2_chr15_-_63449663_63449698	0.0604601	GLI2	ENST00000439025.1|RPS27L|ENSG00000185088.8|ribosomal protein S27-like
hg19_v2_chr15_-_77712429_77712473	0.0604233	GLI2	ENST00000564328.1|PEAK1|ENSG00000173517.6|pseudopodium-enriched atypical kinase 1 	ENST00000558305.1|PEAK1|ENSG00000173517.6|pseudopodium-enriched atypical kinase 1
hg19_v2_chr9_+_35805527_35805527	0.0602997	GLI2	ENST00000421267.1|NPR2|ENSG00000159899.10|natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B)
hg19_v2_chr12_-_13248598_13248630	0.0600899	GLI2	ENST00000337630.6|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000545699.1|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr6_-_31088214_31088228	0.0600692	GLI2	ENST00000376288.2|CDSN|ENSG00000204539.3|corneodesmosin
hg19_v2_chr17_-_3819751_3819794	0.0599621	GLI2	ENST00000225538.3|P2RX1|ENSG00000108405.3|purinergic receptor P2X, ligand-gated ion channel, 1
hg19_v2_chr7_+_130131907_130131947	0.0598838	GLI2	ENST00000223215.4|MEST|ENSG00000106484.10|mesoderm specific transcript 	ENST00000437945.1|MEST|ENSG00000106484.10|mesoderm specific transcript
hg19_v2_chr2_+_114737146_114737158	0.0598344	GLI2	ENST00000412690.1|AC010982.1|ENSG00000234199.2|AC010982.1
hg19_v2_chr9_-_98279241_98279339	0.0593311	GLI2	ENST00000437951.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000375274.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000430669.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000468211.2|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr19_-_40791160_40791177	0.0588432	GLI2	ENST00000358335.5|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr9_+_841690_841702	0.0588177	GLI2	ENST00000382276.3|DMRT1|ENSG00000137090.7|doublesex and mab-3 related transcription factor 1
hg19_v2_chr1_+_93646238_93646298	0.0586896	GLI2	ENST00000448243.1|CCDC18|ENSG00000122483.13|coiled-coil domain containing 18 	ENST00000370276.1|CCDC18|ENSG00000122483.13|coiled-coil domain containing 18
hg19_v2_chr1_-_10856694_10856715	0.0586285	GLI2	ENST00000377022.3|CASZ1|ENSG00000130940.10|castor zinc finger 1 	ENST00000344008.5|CASZ1|ENSG00000130940.10|castor zinc finger 1
hg19_v2_chr3_+_112930373_112930384	0.0580604	GLI2	ENST00000498710.1|BOC|ENSG00000144857.10|BOC cell adhesion associated, oncogene regulated
hg19_v2_chr7_-_23053693_23053715	0.0580297	GLI2	ENST00000409763.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A 	ENST00000409923.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A
hg19_v2_chr1_+_1950763_1950815	0.0580051	GLI2	ENST00000378585.4|GABRD|ENSG00000187730.6|gamma-aminobutyric acid (GABA) A receptor, delta
hg19_v2_chr16_-_71843047_71843104	0.0577879	GLI2	ENST00000299980.4|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000393512.3|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr11_-_13484713_13484850	0.057774	GLI2	ENST00000526841.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000529708.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000278174.5|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000528120.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10
hg19_v2_chr12_-_56122220_56122266	0.0577377	GLI2	ENST00000552692.1|CD63|ENSG00000135404.7|CD63 molecule
hg19_v2_chr17_+_33288549_33288598	0.0577331	GLI2	ENST00000361952.3|ZNF830|ENSG00000198783.4|zinc finger protein 830
hg19_v2_chr5_+_140180635_140180783	0.0574215	GLI2	ENST00000522353.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3 	ENST00000532566.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3
hg19_v2_chr1_+_27114589_27114712	0.0573622	GLI2	ENST00000431541.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000449950.2|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000374145.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V
hg19_v2_chr16_-_28506840_28506942	0.0573314	GLI2	ENST00000569430.1|CLN3|ENSG00000188603.12|ceroid-lipofuscinosis, neuronal 3
hg19_v2_chr7_+_87257701_87257770	0.0572269	GLI2	ENST00000338056.3|RUNDC3B|ENSG00000105784.11|RUN domain containing 3B 	ENST00000493037.1|RUNDC3B|ENSG00000105784.11|RUN domain containing 3B
hg19_v2_chr9_+_33265011_33265059	0.0571239	GLI2	ENST00000419016.2|CHMP5|ENSG00000086065.9|charged multivesicular body protein 5
hg19_v2_chr19_+_49713991_49714040	0.0570653	GLI2	ENST00000597316.1|TRPM4|ENSG00000130529.11|transient receptor potential cation channel, subfamily M, member 4
hg19_v2_chr1_-_204654481_204654512	0.0569712	GLI2	ENST00000367176.3|LRRN2|ENSG00000170382.7|leucine rich repeat neuronal 2
hg19_v2_chr10_+_49892904_49892925	0.0567699	GLI2	ENST00000360890.2|WDFY4|ENSG00000128815.13|WDFY family member 4
hg19_v2_chr11_-_8985927_8986008	0.0566372	GLI2	ENST00000528117.1|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B 	ENST00000309134.5|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B
hg19_v2_chrX_-_130037198_130037234	0.0564689	GLI2	ENST00000370935.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000338144.3|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000394363.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2
hg19_v2_chrX_-_52736211_52736239	0.0564502	GLI2	ENST00000336777.5|SSX2|ENSG00000241476.3|synovial sarcoma, X breakpoint 2 	ENST00000337502.5|SSX2|ENSG00000241476.3|synovial sarcoma, X breakpoint 2
hg19_v2_chr20_-_61885826_61885892	0.0563312	GLI2	ENST00000370316.3|NKAIN4|ENSG00000101198.10|Na+/K+ transporting ATPase interacting 4
hg19_v2_chr13_+_20532900_20532923	0.0562154	GLI2	ENST00000382871.2|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr10_-_35379241_35379294	0.0561899	GLI2	ENST00000374748.1|CUL2|ENSG00000108094.10|cullin 2 	ENST00000374749.3|CUL2|ENSG00000108094.10|cullin 2
hg19_v2_chr9_-_37785037_37785079	0.055997	GLI2	ENST00000327304.5|EXOSC3|ENSG00000107371.8|exosome component 3 	ENST00000396521.3|EXOSC3|ENSG00000107371.8|exosome component 3
hg19_v2_chr20_+_49348081_49348096	0.055739	GLI2	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr7_+_142985308_142985453	0.0551089	GLI2	ENST00000310447.5|CASP2|ENSG00000106144.15|caspase 2, apoptosis-related cysteine peptidase
hg19_v2_chr1_+_225117350_225117409	0.0550208	GLI2	ENST00000413949.2|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14 	ENST00000430092.1|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14 	ENST00000366850.3|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14 	ENST00000400952.3|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14 	ENST00000366849.1|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14
hg19_v2_chr19_+_35820064_35820115	0.0549091	GLI2	ENST00000341773.6|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000600131.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000270311.6|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000595780.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000597916.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000593867.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000600424.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000599811.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000536635.2|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000085219.5|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000544992.2|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000419549.2|CD22|ENSG00000012124.10|CD22 molecule
hg19_v2_chr8_+_28351707_28351781	0.0547151	GLI2	ENST00000537916.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000523546.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000240093.3|FZD3|ENSG00000104290.6|frizzled family receptor 3
hg19_v2_chr1_+_154947126_154947147	0.0546076	GLI2	ENST00000368439.1|CKS1B|ENSG00000173207.8|CDC28 protein kinase regulatory subunit 1B
hg19_v2_chr7_-_135433460_135433499	0.0544588	GLI2	ENST00000415751.1|FAM180A|ENSG00000189320.4|family with sequence similarity 180, member A
hg19_v2_chr19_-_53758094_53758147	0.0539399	GLI2	ENST00000601828.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000598513.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000599012.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000333952.4|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000598806.1|ZNF677|ENSG00000197928.6|zinc finger protein 677
hg19_v2_chr19_+_37464063_37464127	0.0538999	GLI2	ENST00000586353.1|ZNF568|ENSG00000198453.8|zinc finger protein 568 	ENST00000433993.1|ZNF568|ENSG00000198453.8|zinc finger protein 568 	ENST00000592567.1|ZNF568|ENSG00000198453.8|zinc finger protein 568
hg19_v2_chr12_-_123752624_123752835	0.053853	GLI2	ENST00000542174.1|CDK2AP1|ENSG00000111328.2|cyclin-dependent kinase 2 associated protein 1 	ENST00000535796.1|CDK2AP1|ENSG00000111328.2|cyclin-dependent kinase 2 associated protein 1
hg19_v2_chr3_+_50230105_50230114	0.05361	GLI2	ENST00000440836.1|GNAT1|ENSG00000114349.5|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1
hg19_v2_chr2_+_37571845_37571874	0.0534871	GLI2	ENST00000537448.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chr2_-_70475730_70475798	0.0534623	GLI2	ENST00000445587.1|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000433529.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000415783.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr5_+_148724993_148725102	0.0533847	GLI2	ENST00000513661.1|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli) 	ENST00000329271.3|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli) 	ENST00000416916.2|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli)
hg19_v2_chr16_+_28875268_28875317	0.0532456	GLI2	ENST00000395532.4|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1
hg19_v2_chr16_+_28996114_28996166	0.0531169	GLI2	ENST00000395461.3|LAT|ENSG00000213658.6|linker for activation of T cells
hg19_v2_chr17_+_62503073_62503143	0.0530617	GLI2	ENST00000580188.1|CEP95|ENSG00000258890.2|centrosomal protein 95kDa 	ENST00000581056.1|CEP95|ENSG00000258890.2|centrosomal protein 95kDa
hg19_v2_chr1_+_3614591_3614622	0.0529433	GLI2	ENST00000378290.4|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr5_-_9546180_9546195	0.0529412	GLI2	ENST00000382496.5|SEMA5A|ENSG00000112902.7|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
hg19_v2_chr13_+_20532807_20532841	0.0528261	GLI2	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr5_+_41925325_41925416	0.0526897	GLI2	ENST00000296812.2|FBXO4|ENSG00000151876.8|F-box protein 4 	ENST00000281623.3|FBXO4|ENSG00000151876.8|F-box protein 4 	ENST00000509134.1|FBXO4|ENSG00000151876.8|F-box protein 4
hg19_v2_chr13_-_41240717_41240735	0.0525767	GLI2	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr17_-_60005329_60005357	0.0520197	GLI2	ENST00000251334.6|INTS2|ENSG00000108506.7|integrator complex subunit 2
hg19_v2_chr12_-_64784306_64784378	0.0519086	GLI2	ENST00000543259.1|C12orf56|ENSG00000185306.8|chromosome 12 open reading frame 56
hg19_v2_chr3_+_111260856_111260948	0.0517808	GLI2	ENST00000352690.4|CD96|ENSG00000153283.8|CD96 molecule
hg19_v2_chr5_-_156569754_156569786	0.0517415	GLI2	ENST00000420343.1|MED7|ENSG00000155868.7|mediator complex subunit 7
hg19_v2_chr17_-_36499693_36499844	0.0516218	GLI2	ENST00000342292.4|GPR179|ENSG00000188888.7|G protein-coupled receptor 179
hg19_v2_chr1_-_160549235_160549306	0.0515896	GLI2	ENST00000368054.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368048.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000311224.4|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368051.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000534968.1|CD84|ENSG00000066294.10|CD84 molecule
hg19_v2_chr1_+_6105974_6105985	0.0514338	GLI2	ENST00000378083.3|KCNAB2|ENSG00000069424.10|potassium voltage-gated channel, shaker-related subfamily, beta member 2
hg19_v2_chr3_-_128902759_128902770	0.0513081	GLI2	ENST00000422453.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000504813.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000512338.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein
hg19_v2_chrX_+_51075658_51075686	0.0509871	GLI2	ENST00000356450.2|NUDT10|ENSG00000122824.6|nudix (nucleoside diphosphate linked moiety X)-type motif 10
hg19_v2_chr19_-_2050852_2050895	0.0508186	GLI2	ENST00000541165.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000591601.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2
hg19_v2_chr1_+_150954493_150954528	0.0507291	GLI2	ENST00000368947.4|ANXA9|ENSG00000143412.5|annexin A9
hg19_v2_chr5_-_56248030_56248039	0.0507103	GLI2	ENST00000336942.5|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr11_-_118789613_118789738	0.0506671	GLI2	ENST00000532899.1|BCL9L|ENSG00000186174.8|B-cell CLL/lymphoma 9-like
hg19_v2_chr12_+_77158021_77158045	0.0505981	GLI2	ENST00000550876.1|ZDHHC17|ENSG00000186908.10|zinc finger, DHHC-type containing 17
hg19_v2_chr17_+_79071365_79071401	0.0505371	GLI2	ENST00000576756.1|BAIAP2|ENSG00000175866.11|BAI1-associated protein 2
hg19_v2_chr17_-_3794021_3794042	0.0503166	GLI2	ENST00000381769.2|CAMKK1|ENSG00000004660.10|calcium/calmodulin-dependent protein kinase kinase 1, alpha
hg19_v2_chr1_-_209741018_209741127	0.0502094	GLI2	ENST00000424696.2|RP1-272L16.1|ENSG00000224260.2|RP1-272L16.1
hg19_v2_chr14_-_91976488_91976661	0.0499605	GLI2	ENST00000554684.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000337238.4|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000428424.2|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000554511.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
hg19_v2_chr1_+_150522222_150522315	0.0497585	GLI2	ENST00000369039.5|ADAMTSL4|ENSG00000143382.9|ADAMTS-like 4
hg19_v2_chr16_+_776936_777112	0.0494414	GLI2	ENST00000549114.1|HAGHL|ENSG00000103253.13|hydroxyacylglutathione hydrolase-like 	ENST00000341413.4|HAGHL|ENSG00000103253.13|hydroxyacylglutathione hydrolase-like 	ENST00000562187.1|HAGHL|ENSG00000103253.13|hydroxyacylglutathione hydrolase-like 	ENST00000564537.1|HAGHL|ENSG00000103253.13|hydroxyacylglutathione hydrolase-like
hg19_v2_chr17_-_60005365_60005377	0.0494325	GLI2	ENST00000444766.3|INTS2|ENSG00000108506.7|integrator complex subunit 2
hg19_v2_chr11_+_113258495_113258513	0.0491476	GLI2	ENST00000303941.3|ANKK1|ENSG00000170209.4|ankyrin repeat and kinase domain containing 1
hg19_v2_chr12_-_10542617_10542647	0.0489946	GLI2	ENST00000240618.6|KLRK1|ENSG00000213809.4|killer cell lectin-like receptor subfamily K, member 1
hg19_v2_chr6_-_53213780_53213947	0.0488376	GLI2	ENST00000304434.6|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370918.4|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr11_-_68748455_68748455	0.0486953	GLI2	ENST00000309106.3|MRGPRD|ENSG00000172938.3|MAS-related GPR, member D
hg19_v2_chr17_+_29248918_29248950	0.0486437	GLI2	ENST00000581548.1|ADAP2|ENSG00000184060.6|ArfGAP with dual PH domains 2 	ENST00000580525.1|ADAP2|ENSG00000184060.6|ArfGAP with dual PH domains 2
hg19_v2_chr2_-_241759622_241759725	0.0485052	GLI2	ENST00000320389.7|KIF1A|ENSG00000130294.10|kinesin family member 1A 	ENST00000498729.2|KIF1A|ENSG00000130294.10|kinesin family member 1A
hg19_v2_chr3_-_126236588_126236601	0.0483203	GLI2	ENST00000383579.3|UROC1|ENSG00000159650.4|urocanate hydratase 1
hg19_v2_chr1_-_182369751_182369777	0.0482432	GLI2	ENST00000367565.1|TEDDM1|ENSG00000203730.2|transmembrane epididymal protein 1
hg19_v2_chr1_+_6845497_6845561	0.0481377	GLI2	ENST00000473578.1|CAMTA1|ENSG00000171735.14|calmodulin binding transcription activator 1 	ENST00000557126.1|CAMTA1|ENSG00000171735.14|calmodulin binding transcription activator 1
hg19_v2_chr18_-_77793891_77793953	0.0473633	GLI2	ENST00000592957.1|TXNL4A|ENSG00000141759.10|thioredoxin-like 4A 	ENST00000585474.1|TXNL4A|ENSG00000141759.10|thioredoxin-like 4A
hg19_v2_chr1_-_209792111_209792143	0.0472752	GLI2	ENST00000455193.1|LAMB3|ENSG00000196878.8|laminin, beta 3
hg19_v2_chr16_+_57653989_57654022	0.0470719	GLI2	ENST00000567835.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000569372.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000563548.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000562003.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr1_-_55266926_55266958	0.0470464	GLI2	ENST00000371276.4|TTC22|ENSG00000006555.6|tetratricopeptide repeat domain 22
hg19_v2_chr6_+_163148973_163149044	0.0468791	GLI2	ENST00000366888.2|PACRG|ENSG00000112530.7|PARK2 co-regulated
hg19_v2_chr3_-_179169330_179169384	0.0467642	GLI2	ENST00000232564.3|GNB4|ENSG00000114450.5|guanine nucleotide binding protein (G protein), beta polypeptide 4
hg19_v2_chr8_+_21916680_21916695	0.0463307	GLI2	ENST00000358242.3|DMTN|ENSG00000158856.13|dematin actin binding protein 	ENST00000415253.1|DMTN|ENSG00000158856.13|dematin actin binding protein
hg19_v2_chr9_-_33264557_33264668	0.0462744	GLI2	ENST00000473781.1|BAG1|ENSG00000107262.12|BCL2-associated athanogene 	ENST00000488499.1|BAG1|ENSG00000107262.12|BCL2-associated athanogene
hg19_v2_chr2_-_214017151_214017189	0.0462236	GLI2	ENST00000452786.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios)
hg19_v2_chr3_+_184081213_184081224	0.0458816	GLI2	ENST00000429568.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chr9_-_98269481_98269691	0.0457434	GLI2	ENST00000418258.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000553011.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000551845.1|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr10_+_6821545_6821563	0.0456817	GLI2	ENST00000436383.1|LINC00707|ENSG00000238266.1|long intergenic non-protein coding RNA 707
hg19_v2_chrX_+_148863584_148863612	0.0456014	GLI2	ENST00000439010.2|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9 	ENST00000298974.5|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9 	ENST00000522429.1|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9 	ENST00000519822.1|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9
hg19_v2_chr19_+_48824711_48824766	0.0455549	GLI2	ENST00000599704.1|EMP3|ENSG00000142227.6|epithelial membrane protein 3
hg19_v2_chr3_+_156008809_156008839	0.0451166	GLI2	ENST00000302490.8|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v2_chr1_-_26232951_26232959	0.0450936	GLI2	ENST00000426559.2|STMN1|ENSG00000117632.16|stathmin 1 	ENST00000455785.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr11_+_95523621_95523710	0.0448308	GLI2	ENST00000325542.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000325486.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000544522.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000541365.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr19_+_44085189_44085189	0.0448184	GLI2	ENST00000562365.2|PINLYP|ENSG00000234465.6|phospholipase A2 inhibitor and LY6/PLAUR domain containing
hg19_v2_chr16_+_10479906_10479925	0.044697	GLI2	ENST00000562527.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000396560.2|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000396559.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000562102.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000543967.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000569939.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000569900.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2
hg19_v2_chr1_+_40942887_40942997	0.0446575	GLI2	ENST00000372706.1|ZFP69|ENSG00000187815.5|ZFP69 zinc finger protein
hg19_v2_chr16_+_616995_617041	0.0445211	GLI2	ENST00000293874.2|PIGQ|ENSG00000007541.10|phosphatidylinositol glycan anchor biosynthesis, class Q 	ENST00000424439.2|NHLRC4|ENSG00000257108.1|NHL repeat containing 4 	ENST00000540585.1|NHLRC4|ENSG00000257108.1|NHL repeat containing 4 	ENST00000409527.2|PIGQ|ENSG00000007541.10|phosphatidylinositol glycan anchor biosynthesis, class Q
hg19_v2_chr19_-_23941639_23941672	0.0443066	GLI2	ENST00000395385.3|ZNF681|ENSG00000196172.8|zinc finger protein 681 	ENST00000531570.1|ZNF681|ENSG00000196172.8|zinc finger protein 681 	ENST00000528059.1|ZNF681|ENSG00000196172.8|zinc finger protein 681
hg19_v2_chr12_+_57854274_57854274	0.0442332	GLI2	ENST00000528432.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1
hg19_v2_chr19_-_16045665_16045708	0.0442121	GLI2	ENST00000248041.8|CYP4F11|ENSG00000171903.12|cytochrome P450, family 4, subfamily F, polypeptide 11
hg19_v2_chr8_+_22435762_22435792	0.0440219	GLI2	ENST00000456545.1|PDLIM2|ENSG00000120913.19|PDZ and LIM domain 2 (mystique)
hg19_v2_chr7_+_90032821_90032881	0.0440218	GLI2	ENST00000427904.1|CLDN12|ENSG00000157224.11|claudin 12
hg19_v2_chr17_+_63096903_63096938	0.0439327	GLI2	ENST00000582940.1|RP11-160O5.1|ENSG00000263470.1|RP11-160O5.1
hg19_v2_chr5_-_133512683_133512729	0.0438	GLI2	ENST00000353411.6|SKP1|ENSG00000113558.14|S-phase kinase-associated protein 1
hg19_v2_chr10_-_113943447_113943536	0.0437834	GLI2	ENST00000369425.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000348367.4|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000423155.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial
hg19_v2_chr14_+_74416989_74417041	0.0437654	GLI2	ENST00000334571.2|COQ6|ENSG00000119723.11|coenzyme Q6 monooxygenase 	ENST00000554920.1|COQ6|ENSG00000119723.11|coenzyme Q6 monooxygenase
hg19_v2_chr9_-_115818951_115819011	0.0437513	GLI2	ENST00000553380.1|ZFP37|ENSG00000136866.9|ZFP37 zinc finger protein 	ENST00000374227.3|ZFP37|ENSG00000136866.9|ZFP37 zinc finger protein
hg19_v2_chr2_-_203776864_203776949	0.043707	GLI2	ENST00000261015.4|WDR12|ENSG00000138442.5|WD repeat domain 12
hg19_v2_chr4_+_6784401_6784510	0.0436208	GLI2	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr14_-_51297197_51297327	0.0435266	GLI2	ENST00000382043.4|NIN|ENSG00000100503.19|ninein (GSK3B interacting protein)
hg19_v2_chr19_-_35625765_35625776	0.0433476	GLI2	ENST00000591633.1|LGI4|ENSG00000153902.9|leucine-rich repeat LGI family, member 4
hg19_v2_chr3_+_129207033_129207067	0.0432485	GLI2	ENST00000507221.1|IFT122|ENSG00000163913.7|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v2_chr7_-_112726393_112726567	0.0427096	GLI2	ENST00000449591.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000449735.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000438062.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000424100.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85
hg19_v2_chr10_+_75936444_75936537	0.0426826	GLI2	ENST00000372734.3|ADK|ENSG00000156110.9|adenosine kinase 	ENST00000541550.1|ADK|ENSG00000156110.9|adenosine kinase
hg19_v2_chr7_-_151107106_151107129	0.0426768	GLI2	ENST00000334493.6|WDR86|ENSG00000187260.11|WD repeat domain 86
hg19_v2_chr22_-_25170683_25170683	0.0425455	GLI2	ENST00000332271.5|PIWIL3|ENSG00000184571.9|piwi-like RNA-mediated gene silencing 3
hg19_v2_chr3_+_15468862_15468909	0.0425261	GLI2	ENST00000396842.2|EAF1|ENSG00000144597.9|ELL associated factor 1
hg19_v2_chr22_+_18834324_18834324	0.042468	GLI2	ENST00000342005.4|AC008132.13|ENSG00000161103.7|Uncharacterized protein
hg19_v2_chr9_+_93921855_93922055	0.0424137	GLI2	ENST00000423719.2|LINC00484|ENSG00000235641.3|long intergenic non-protein coding RNA 484 	ENST00000609752.1|LINC00484|ENSG00000235641.3|long intergenic non-protein coding RNA 484
hg19_v2_chr4_-_156298028_156298039	0.0422724	GLI2	ENST00000433024.1|MAP9|ENSG00000164114.14|microtubule-associated protein 9 	ENST00000379248.2|MAP9|ENSG00000164114.14|microtubule-associated protein 9
hg19_v2_chr19_-_41196534_41196568	0.0421411	GLI2	ENST00000252891.4|NUMBL|ENSG00000105245.5|numb homolog (Drosophila)-like
hg19_v2_chr16_-_71842706_71842750	0.0420807	GLI2	ENST00000563104.1|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000569975.1|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000565412.1|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000567583.1|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr17_+_29248953_29248978	0.0420663	GLI2	ENST00000581285.1|ADAP2|ENSG00000184060.6|ArfGAP with dual PH domains 2
hg19_v2_chr13_-_108867101_108867130	0.0419778	GLI2	ENST00000356922.4|LIG4|ENSG00000174405.9|ligase IV, DNA, ATP-dependent
hg19_v2_chr12_-_112819896_112819896	0.0416572	GLI2	ENST00000377560.5|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4 	ENST00000430131.2|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4 	ENST00000550722.1|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4 	ENST00000550724.1|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4
hg19_v2_chrX_-_48216101_48216142	0.0413551	GLI2	ENST00000298396.2|SSX3|ENSG00000165584.11|synovial sarcoma, X breakpoint 3 	ENST00000376893.3|SSX3|ENSG00000165584.11|synovial sarcoma, X breakpoint 3
hg19_v2_chr6_-_168479839_168479904	0.0413331	GLI2	ENST00000283309.6|FRMD1|ENSG00000153303.12|FERM domain containing 1
hg19_v2_chr9_-_95298254_95298282	0.041184	GLI2	ENST00000444490.2|ECM2|ENSG00000106823.8|extracellular matrix protein 2, female organ and adipocyte specific
hg19_v2_chr10_+_32735030_32735110	0.0411553	GLI2	ENST00000277657.6|CCDC7|ENSG00000216937.7|coiled-coil domain containing 7 	ENST00000362006.5|CCDC7|ENSG00000216937.7|coiled-coil domain containing 7
hg19_v2_chr9_-_123476612_123476698	0.0410534	GLI2	ENST00000426959.1|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr6_-_53530474_53530508	0.041021	GLI2	ENST00000370905.3|KLHL31|ENSG00000124743.5|kelch-like family member 31
hg19_v2_chr6_+_88182643_88182722	0.0409569	GLI2	ENST00000369556.3|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000544441.1|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369552.4|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369557.5|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1
hg19_v2_chr14_-_75083313_75083360	0.0408875	GLI2	ENST00000556652.1|CTD-2207P18.2|ENSG00000258976.1|CTD-2207P18.2	ENST00000555313.1|CTD-2207P18.2|ENSG00000258976.1|CTD-2207P18.2
hg19_v2_chr3_+_134514093_134514169	0.0408822	GLI2	ENST00000398015.3|EPHB1|ENSG00000154928.12|EPH receptor B1
hg19_v2_chr19_-_11039261_11039357	0.0405625	GLI2	ENST00000590329.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000587943.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000585858.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000586748.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000586575.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000253031.2|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2
hg19_v2_chr17_-_7307358_7307456	0.0404291	GLI2	ENST00000576017.1|TMEM256|ENSG00000205544.3|transmembrane protein 256 	ENST00000535512.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000302422.3|TMEM256|ENSG00000205544.3|transmembrane protein 256
hg19_v2_chr11_-_113345842_113345994	0.0404187	GLI2	ENST00000346454.3|DRD2|ENSG00000149295.9|dopamine receptor D2
hg19_v2_chr12_+_51633061_51633095	0.0401274	GLI2	ENST00000551313.1|DAZAP2|ENSG00000183283.11|DAZ associated protein 2
hg19_v2_chr15_-_53082178_53082209	0.0400873	GLI2	ENST00000305901.5|ONECUT1|ENSG00000169856.7|one cut homeobox 1
hg19_v2_chr10_+_75910960_75910989	0.0400796	GLI2	ENST00000539909.1|ADK|ENSG00000156110.9|adenosine kinase 	ENST00000286621.2|ADK|ENSG00000156110.9|adenosine kinase
hg19_v2_chr3_-_49449350_49449464	0.0399722	GLI2	ENST00000454011.2|RHOA|ENSG00000067560.6|ras homolog family member A 	ENST00000445425.1|RHOA|ENSG00000067560.6|ras homolog family member A 	ENST00000422781.1|RHOA|ENSG00000067560.6|ras homolog family member A
hg19_v2_chr16_-_1031259_1031327	0.0398273	GLI2	ENST00000563837.1|RP11-161M6.2|ENSG00000260807.2|RP11-161M6.2	ENST00000570014.1|LMF1|ENSG00000103227.14|lipase maturation factor 1 	ENST00000563863.1|RP11-161M6.2|ENSG00000260807.2|RP11-161M6.2	ENST00000565069.1|RP11-161M6.2|ENSG00000260807.2|RP11-161M6.2
hg19_v2_chr1_+_156123359_156123398	0.0397764	GLI2	ENST00000368284.1|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENST00000368286.2|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENST00000438830.1|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
hg19_v2_chr9_-_115653176_115653199	0.0394512	GLI2	ENST00000374228.4|SLC46A2|ENSG00000119457.7|solute carrier family 46, member 2
hg19_v2_chr10_-_104474128_104474209	0.0394508	GLI2	ENST00000260746.5|ARL3|ENSG00000138175.8|ADP-ribosylation factor-like 3
hg19_v2_chr9_-_33264676_33264761	0.0394119	GLI2	ENST00000472232.3|BAG1|ENSG00000107262.12|BCL2-associated athanogene 	ENST00000379704.2|BAG1|ENSG00000107262.12|BCL2-associated athanogene
hg19_v2_chr9_-_130517309_130517388	0.0391981	GLI2	ENST00000414380.1|SH2D3C|ENSG00000095370.15|SH2 domain containing 3C
hg19_v2_chr15_+_63569731_63569783	0.039115	GLI2	ENST00000261879.5|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit
hg19_v2_chr10_+_105315102_105315137	0.0390853	GLI2	ENST00000369777.2|NEURL|ENSG00000107954.6|neuralized E3 ubiquitin protein ligase 1
hg19_v2_chr3_-_179754806_179754872	0.0390785	GLI2	ENST00000485199.1|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like
hg19_v2_chrX_-_48271344_48271344	0.0388837	GLI2	ENST00000376884.2|SSX4B|ENSG00000198946.3|synovial sarcoma, X breakpoint 4B 	ENST00000396928.1|SSX4B|ENSG00000198946.3|synovial sarcoma, X breakpoint 4B
hg19_v2_chr11_+_69931519_69931528	0.0387637	GLI2	ENST00000316296.5|ANO1|ENSG00000131620.13|anoctamin 1, calcium activated chloride channel 	ENST00000530676.1|ANO1|ENSG00000131620.13|anoctamin 1, calcium activated chloride channel
hg19_v2_chrX_-_152989531_152989568	0.0387544	GLI2	ENST00000458587.2|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31 	ENST00000416815.1|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31
hg19_v2_chr1_+_203097407_203097476	0.0387036	GLI2	ENST00000367235.1|ADORA1|ENSG00000163485.11|adenosine A1 receptor
hg19_v2_chr2_-_224702201_224702256	0.0387033	GLI2	ENST00000446015.2|AP1S3|ENSG00000152056.12|adaptor-related protein complex 1, sigma 3 subunit
hg19_v2_chr15_-_78933567_78933604	0.0386863	GLI2	ENST00000261751.3|CHRNB4|ENSG00000117971.7|cholinergic receptor, nicotinic, beta 4 (neuronal) 	ENST00000412074.2|CHRNB4|ENSG00000117971.7|cholinergic receptor, nicotinic, beta 4 (neuronal)
hg19_v2_chr17_-_19062424_19062424	0.0381323	GLI2	ENST00000399083.1|AC007952.6|ENSG00000197665.5|Uncharacterized protein
hg19_v2_chr14_+_78870030_78870098	0.037825	GLI2	ENST00000553631.1|NRXN3|ENSG00000021645.13|neurexin 3 	ENST00000554719.1|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr2_+_32502952_32503025	0.0374908	GLI2	ENST00000238831.4|YIPF4|ENSG00000119820.6|Yip1 domain family, member 4
hg19_v2_chr1_+_145575227_145575324	0.0374524	GLI2	ENST00000393046.2|PIAS3|ENSG00000131788.11|protein inhibitor of activated STAT, 3 	ENST00000369299.3|PIAS3|ENSG00000131788.11|protein inhibitor of activated STAT, 3 	ENST00000463514.2|PIAS3|ENSG00000131788.11|protein inhibitor of activated STAT, 3
hg19_v2_chrX_+_48242863_48242939	0.037318	GLI2	ENST00000376886.2|SSX4|ENSG00000204645.4|synovial sarcoma, X breakpoint 4 	ENST00000375517.3|SSX4|ENSG00000204645.4|synovial sarcoma, X breakpoint 4
hg19_v2_chr5_-_60458179_60458310	0.0372581	GLI2	ENST00000507416.1|SMIM15|ENSG00000188725.3|small integral membrane protein 15 	ENST00000339020.3|SMIM15|ENSG00000188725.3|small integral membrane protein 15
hg19_v2_chr9_+_130860583_130860742	0.0371262	GLI2	ENST00000373064.5|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg19_v2_chr7_+_99971068_99971128	0.0369828	GLI2	ENST00000198536.2|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha 	ENST00000453419.1|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha
hg19_v2_chr3_-_69062764_69062788	0.0369417	GLI2	ENST00000295571.5|EOGT|ENSG00000163378.9|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr8_-_94752946_94753008	0.0368263	GLI2	ENST00000519109.1|RBM12B|ENSG00000183808.7|RNA binding motif protein 12B
hg19_v2_chr7_+_116312411_116312502	0.0366797	GLI2	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr3_-_126236605_126236621	0.0366449	GLI2	ENST00000290868.2|UROC1|ENSG00000159650.4|urocanate hydratase 1
hg19_v2_chr22_+_51176624_51176663	0.0366301	GLI2	ENST00000216139.5|ACR|ENSG00000100312.6|acrosin 	ENST00000529621.1|ACR|ENSG00000100312.6|acrosin
hg19_v2_chr11_+_66059339_66059348	0.0366249	GLI2	ENST00000327259.4|TMEM151A|ENSG00000179292.4|transmembrane protein 151A
hg19_v2_chr17_-_33288522_33288533	0.0365293	GLI2	ENST00000314144.5|CCT6B|ENSG00000132141.9|chaperonin containing TCP1, subunit 6B (zeta 2)
hg19_v2_chr19_+_2389784_2389784	0.036522	GLI2	ENST00000332578.3|TMPRSS9|ENSG00000178297.8|transmembrane protease, serine 9
hg19_v2_chr11_+_20409070_20409164	0.0364346	GLI2	ENST00000331079.6|PRMT3|ENSG00000185238.8|protein arginine methyltransferase 3
hg19_v2_chr18_-_60987220_60987386	0.0363031	GLI2	ENST00000398117.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr5_-_137878887_137878989	0.0362075	GLI2	ENST00000507939.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000572514.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000499810.2|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000360541.5|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1
hg19_v2_chr19_+_23299777_23299844	0.0361947	GLI2	ENST00000597761.2|ZNF730|ENSG00000183850.9|zinc finger protein 730
hg19_v2_chr4_+_62067860_62067900	0.0361427	GLI2	ENST00000514591.1|LPHN3|ENSG00000150471.11|latrophilin 3
hg19_v2_chr16_-_71842941_71843016	0.0360812	GLI2	ENST00000423132.2|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000433195.2|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000569748.1|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000570017.1|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr17_-_79995553_79995608	0.0359644	GLI2	ENST00000581584.1|DCXR|ENSG00000169738.3|dicarbonyl/L-xylulose reductase 	ENST00000577712.1|DCXR|ENSG00000169738.3|dicarbonyl/L-xylulose reductase 	ENST00000582900.1|DCXR|ENSG00000169738.3|dicarbonyl/L-xylulose reductase 	ENST00000579155.1|DCXR|ENSG00000169738.3|dicarbonyl/L-xylulose reductase 	ENST00000306869.2|DCXR|ENSG00000169738.3|dicarbonyl/L-xylulose reductase
hg19_v2_chr10_-_75910789_75910821	0.0358891	GLI2	ENST00000355264.4|AP3M1|ENSG00000185009.8|adaptor-related protein complex 3, mu 1 subunit
hg19_v2_chr1_-_157108130_157108173	0.0357154	GLI2	ENST00000368192.4|ETV3|ENSG00000117036.7|ets variant 3
hg19_v2_chr1_+_33546714_33546769	0.0356985	GLI2	ENST00000294517.6|ADC|ENSG00000142920.12|arginine decarboxylase 	ENST00000358680.3|ADC|ENSG00000142920.12|arginine decarboxylase 	ENST00000373443.3|ADC|ENSG00000142920.12|arginine decarboxylase 	ENST00000398167.1|ADC|ENSG00000142920.12|arginine decarboxylase
hg19_v2_chr7_-_135433534_135433594	0.0355212	GLI2	ENST00000338588.3|FAM180A|ENSG00000189320.4|family with sequence similarity 180, member A
hg19_v2_chr2_-_172290482_172290596	0.0355063	GLI2	ENST00000442541.1|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000392599.2|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000375258.4|METTL8|ENSG00000123600.14|methyltransferase like 8
hg19_v2_chr1_-_9132311_9132325	0.035441	GLI2	ENST00000474145.1|SLC2A5|ENSG00000142583.13|solute carrier family 2 (facilitated glucose/fructose transporter), member 5
hg19_v2_chr17_+_36861735_36861795	0.0354163	GLI2	ENST00000378137.5|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 	ENST00000325718.7|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v2_chr12_+_50355647_50355661	0.0353996	GLI2	ENST00000293599.6|AQP5|ENSG00000161798.6|aquaporin 5
hg19_v2_chr9_-_113800317_113800328	0.0352828	GLI2	ENST00000374431.3|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr1_-_9131776_9131791	0.0352596	GLI2	ENST00000484798.1|SLC2A5|ENSG00000142583.13|solute carrier family 2 (facilitated glucose/fructose transporter), member 5
hg19_v2_chr1_-_85358850_85358906	0.035031	GLI2	ENST00000370611.3|LPAR3|ENSG00000171517.5|lysophosphatidic acid receptor 3
hg19_v2_chr5_-_177659539_177659598	0.0349857	GLI2	ENST00000476170.2|PHYKPL|ENSG00000175309.10|5-phosphohydroxy-L-lysine phospho-lyase
hg19_v2_chr8_-_134115118_134115298	0.0347522	GLI2	ENST00000395352.3|SLA|ENSG00000155926.9|Src-like-adaptor 	ENST00000338087.5|SLA|ENSG00000155926.9|Src-like-adaptor
hg19_v2_chr3_-_58419537_58419584	0.0346183	GLI2	ENST00000474765.1|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000485460.1|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000302746.6|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000383714.4|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta
hg19_v2_chr22_+_20008595_20008644	0.034605	GLI2	ENST00000398042.2|TANGO2|ENSG00000183597.11|transport and golgi organization 2 homolog (Drosophila) 	ENST00000450664.1|TANGO2|ENSG00000183597.11|transport and golgi organization 2 homolog (Drosophila) 	ENST00000327374.4|TANGO2|ENSG00000183597.11|transport and golgi organization 2 homolog (Drosophila) 	ENST00000432883.1|TANGO2|ENSG00000183597.11|transport and golgi organization 2 homolog (Drosophila)
hg19_v2_chr14_-_91976794_91976871	0.0345528	GLI2	ENST00000555462.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
hg19_v2_chr19_-_42498369_42498390	0.0345479	GLI2	ENST00000302102.5|ATP1A3|ENSG00000105409.11|ATPase, Na+/K+ transporting, alpha 3 polypeptide 	ENST00000545399.1|ATP1A3|ENSG00000105409.11|ATPase, Na+/K+ transporting, alpha 3 polypeptide
hg19_v2_chr4_-_156297949_156297996	0.0343747	GLI2	ENST00000515654.1|MAP9|ENSG00000164114.14|microtubule-associated protein 9
hg19_v2_chr3_-_179754556_179754577	0.0340927	GLI2	ENST00000263962.8|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like
hg19_v2_chr11_-_113346111_113346125	0.0338355	GLI2	ENST00000362072.3|DRD2|ENSG00000149295.9|dopamine receptor D2
hg19_v2_chr11_-_6640585_6640692	0.0337429	GLI2	ENST00000533371.1|TPP1|ENSG00000166340.10|tripeptidyl peptidase I 	ENST00000528657.1|TPP1|ENSG00000166340.10|tripeptidyl peptidase I 	ENST00000436873.2|TPP1|ENSG00000166340.10|tripeptidyl peptidase I 	ENST00000299427.6|TPP1|ENSG00000166340.10|tripeptidyl peptidase I
hg19_v2_chr9_-_35096545_35096637	0.0337371	GLI2	ENST00000378617.3|PIGO|ENSG00000165282.9|phosphatidylinositol glycan anchor biosynthesis, class O 	ENST00000341666.3|PIGO|ENSG00000165282.9|phosphatidylinositol glycan anchor biosynthesis, class O 	ENST00000361778.2|PIGO|ENSG00000165282.9|phosphatidylinositol glycan anchor biosynthesis, class O
hg19_v2_chr11_-_118047376_118047388	0.0337165	GLI2	ENST00000278947.5|SCN2B|ENSG00000149575.5|sodium channel, voltage-gated, type II, beta subunit
hg19_v2_chr1_+_156123318_156123358	0.0336098	GLI2	ENST00000368285.3|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
hg19_v2_chr12_-_89919765_89919849	0.0335666	GLI2	ENST00000541909.1|POC1B|ENSG00000139323.9|POC1 centriolar protein B 	ENST00000313546.3|POC1B|ENSG00000139323.9|POC1 centriolar protein B
hg19_v2_chrX_-_148669116_148669116	0.033453	GLI2	ENST00000243314.5|MAGEA9B|ENSG00000123584.7|melanoma antigen family A, 9B
hg19_v2_chr19_-_55791058_55791244	0.0334246	GLI2	ENST00000587959.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000585927.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587922.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000585698.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr19_+_3708338_3708374	0.0332844	GLI2	ENST00000590545.1|TJP3|ENSG00000105289.10|tight junction protein 3
hg19_v2_chr2_-_70475701_70475717	0.0331174	GLI2	ENST00000282574.4|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chrX_+_23685563_23685648	0.0330193	GLI2	ENST00000379341.4|PRDX4|ENSG00000123131.8|peroxiredoxin 4
hg19_v2_chr11_-_116662593_116662620	0.0330019	GLI2	ENST00000227665.4|APOA5|ENSG00000110243.7|apolipoprotein A-V
hg19_v2_chr4_-_57687847_57687911	0.0328597	GLI2	ENST00000504762.1|SPINK2|ENSG00000128040.6|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) 	ENST00000248701.4|SPINK2|ENSG00000128040.6|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) 	ENST00000506738.1|SPINK2|ENSG00000128040.6|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)
hg19_v2_chr6_-_53213587_53213772	0.0327168	GLI2	ENST00000542638.1|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370913.5|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000541407.1|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr1_-_40105617_40105617	0.0327033	GLI2	ENST00000372852.3|HEYL|ENSG00000163909.6|hes-related family bHLH transcription factor with YRPW motif-like
hg19_v2_chr1_-_2564423_2564437	0.0326584	GLI2	ENST00000378412.3|MMEL1|ENSG00000142606.11|membrane metallo-endopeptidase-like 1
hg19_v2_chr18_+_268148_268188	0.0324549	GLI2	ENST00000581677.1|RP11-705O1.8|ENSG00000263884.1|RP11-705O1.8
hg19_v2_chr19_+_10563567_10563617	0.0324364	GLI2	ENST00000344979.3|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr11_-_14380664_14380739	0.0323386	GLI2	ENST00000545643.1|RRAS2|ENSG00000133818.8|related RAS viral (r-ras) oncogene homolog 2 	ENST00000256196.4|RRAS2|ENSG00000133818.8|related RAS viral (r-ras) oncogene homolog 2
hg19_v2_chr13_-_46756351_46756459	0.0322714	GLI2	ENST00000323076.2|LCP1|ENSG00000136167.9|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v2_chr1_+_207226574_207226656	0.0322544	GLI2	ENST00000367080.3|PFKFB2|ENSG00000123836.10|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 	ENST00000367079.2|PFKFB2|ENSG00000123836.10|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
hg19_v2_chr19_-_54567035_54567060	0.0321959	GLI2	ENST00000366170.2|VSTM1|ENSG00000189068.5|V-set and transmembrane domain containing 1 	ENST00000425006.2|VSTM1|ENSG00000189068.5|V-set and transmembrane domain containing 1
hg19_v2_chr11_+_20409227_20409298	0.0321314	GLI2	ENST00000437750.2|PRMT3|ENSG00000185238.8|protein arginine methyltransferase 3
hg19_v2_chr2_+_186603545_186603622	0.0320422	GLI2	ENST00000424728.1|FSIP2|ENSG00000188738.9|fibrous sheath interacting protein 2
hg19_v2_chr6_-_163148700_163148740	0.0319912	GLI2	ENST00000366894.1|PARK2|ENSG00000185345.14|parkin RBR E3 ubiquitin protein ligase 	ENST00000338468.3|PARK2|ENSG00000185345.14|parkin RBR E3 ubiquitin protein ligase
hg19_v2_chr10_+_88414338_88414374	0.0319678	GLI2	ENST00000241891.5|OPN4|ENSG00000122375.7|opsin 4 	ENST00000443292.1|OPN4|ENSG00000122375.7|opsin 4
hg19_v2_chr14_-_70826438_70826453	0.0318226	GLI2	ENST00000389912.6|COX16|ENSG00000133983.10|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
hg19_v2_chr19_-_53757941_53758088	0.0315852	GLI2	ENST00000594517.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000601413.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000594681.1|ZNF677|ENSG00000197928.6|zinc finger protein 677
hg19_v2_chr1_+_152881014_152881031	0.0311969	GLI2	ENST00000368764.3|IVL|ENSG00000163207.5|involucrin 	ENST00000392667.2|IVL|ENSG00000163207.5|involucrin
hg19_v2_chr3_-_69591727_69591760	0.031173	GLI2	ENST00000459638.1|FRMD4B|ENSG00000114541.10|FERM domain containing 4B
hg19_v2_chr6_-_27841289_27841318	0.0311442	GLI2	ENST00000355981.2|HIST1H4L|ENSG00000198558.2|histone cluster 1, H4l
hg19_v2_chr5_-_218251_218330	0.0311373	GLI2	ENST00000296824.3|CCDC127|ENSG00000164366.3|coiled-coil domain containing 127
hg19_v2_chr1_-_59012365_59012474	0.0309009	GLI2	ENST00000456980.1|OMA1|ENSG00000162600.7|OMA1 zinc metallopeptidase 	ENST00000482274.2|OMA1|ENSG00000162600.7|OMA1 zinc metallopeptidase 	ENST00000453710.1|OMA1|ENSG00000162600.7|OMA1 zinc metallopeptidase 	ENST00000419242.1|OMA1|ENSG00000162600.7|OMA1 zinc metallopeptidase 	ENST00000358603.2|OMA1|ENSG00000162600.7|OMA1 zinc metallopeptidase 	ENST00000371226.3|OMA1|ENSG00000162600.7|OMA1 zinc metallopeptidase 	ENST00000426139.1|OMA1|ENSG00000162600.7|OMA1 zinc metallopeptidase
hg19_v2_chr15_+_40531621_40531719	0.0308207	GLI2	ENST00000560346.1|PAK6|ENSG00000137843.7|p21 protein (Cdc42/Rac)-activated kinase 6
hg19_v2_chr1_+_179262905_179262986	0.0307779	GLI2	ENST00000539888.1|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1 	ENST00000540564.1|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1 	ENST00000535686.1|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1 	ENST00000367619.3|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1
hg19_v2_chr19_-_42498231_42498356	0.030756	GLI2	ENST00000602133.1|ATP1A3|ENSG00000105409.11|ATPase, Na+/K+ transporting, alpha 3 polypeptide
hg19_v2_chr1_+_164528866_164528877	0.0306647	GLI2	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr16_-_2031464_2031550	0.030511	GLI2	ENST00000356120.4|NOXO1|ENSG00000196408.7|NADPH oxidase organizer 1 	ENST00000354249.4|NOXO1|ENSG00000196408.7|NADPH oxidase organizer 1
hg19_v2_chr1_-_241520525_241520536	0.0304636	GLI2	ENST00000366565.1|RGS7|ENSG00000182901.11|regulator of G-protein signaling 7
hg19_v2_chr15_-_96590126_96590159	0.0303841	GLI2	ENST00000561051.1|RP11-4G2.1|ENSG00000259348.1|RP11-4G2.1
hg19_v2_chrX_-_106960285_106960365	0.0297319	GLI2	ENST00000503515.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372397.2|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr21_+_34804479_34804626	0.029499	GLI2	ENST00000421802.1|IFNGR2|ENSG00000159128.10|interferon gamma receptor 2 (interferon gamma transducer 1)
hg19_v2_chr2_+_131369054_131369054	0.0294507	GLI2	ENST00000409602.1|POTEJ|ENSG00000222038.3|POTE ankyrin domain family, member J
hg19_v2_chr16_-_18430593_18430593	0.0294469	GLI2	ENST00000525596.1|NPIPA8|ENSG00000214940.4|nuclear pore complex interacting protein family, member A8
hg19_v2_chr11_+_61560348_61560452	0.0293628	GLI2	ENST00000535723.1|FEN1|ENSG00000168496.3|flap structure-specific endonuclease 1 	ENST00000574708.1|FADS2|ENSG00000134824.9|fatty acid desaturase 2
hg19_v2_chr4_+_107236692_107236709	0.0292995	GLI2	ENST00000510207.1|AIMP1|ENSG00000164022.12|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
hg19_v2_chr11_+_64008443_64008477	0.0291145	GLI2	ENST00000309366.4|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa
hg19_v2_chr14_+_79746249_79746291	0.0289918	GLI2	ENST00000428277.2|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr14_-_68066975_68067027	0.0289511	GLI2	ENST00000559581.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000560722.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000559415.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000216452.4|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H
hg19_v2_chr1_-_229478236_229478308	0.0289329	GLI2	ENST00000366687.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein 	ENST00000452552.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein
hg19_v2_chr16_-_4664382_4664407	0.0288927	GLI2	ENST00000591113.1|UBALD1|ENSG00000153443.8|UBA-like domain containing 1
hg19_v2_chr17_-_79917645_79917686	0.0288452	GLI2	ENST00000477214.1|NOTUM|ENSG00000185269.7|notum pectinacetylesterase homolog (Drosophila)
hg19_v2_chr7_+_87257854_87257931	0.0287046	GLI2	ENST00000394654.3|RUNDC3B|ENSG00000105784.11|RUN domain containing 3B
hg19_v2_chr17_-_17723746_17723824	0.0286206	GLI2	ENST00000577897.1|SREBF1|ENSG00000072310.12|sterol regulatory element binding transcription factor 1
hg19_v2_chr11_-_18765389_18765499	0.0285357	GLI2	ENST00000477854.1|PTPN5|ENSG00000110786.13|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
hg19_v2_chr12_+_3000037_3000067	0.0285016	GLI2	ENST00000544943.1|TULP3|ENSG00000078246.11|tubby like protein 3 	ENST00000448120.2|TULP3|ENSG00000078246.11|tubby like protein 3
hg19_v2_chr16_+_84224780_84224791	0.0283922	GLI2	ENST00000315906.5|ADAD2|ENSG00000140955.6|adenosine deaminase domain containing 2
hg19_v2_chr16_-_53537105_53537163	0.0281594	GLI2	ENST00000568596.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000570004.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000564497.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000300245.4|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000394657.7|AKTIP|ENSG00000166971.12|AKT interacting protein
hg19_v2_chr2_-_85895295_85895331	0.0279301	GLI2	ENST00000428225.1|SFTPB|ENSG00000168878.12|surfactant protein B 	ENST00000519937.2|SFTPB|ENSG00000168878.12|surfactant protein B
hg19_v2_chrX_-_2418936_2419024	0.0279297	GLI2	ENST00000461691.1|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381223.4|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381222.2|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000412516.2|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked 	ENST00000334651.5|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked
hg19_v2_chr11_-_1912084_1912084	0.0278832	GLI2	ENST00000391480.1|C11orf89|ENSG00000184682.5|chromosome 11 open reading frame 89
hg19_v2_chr4_+_77177512_77177606	0.0276196	GLI2	ENST00000606246.1|FAM47E|ENSG00000189157.9|family with sequence similarity 47, member E
hg19_v2_chr7_-_141401951_141401985	0.0275617	GLI2	ENST00000536163.1|KIAA1147|ENSG00000257093.2|KIAA1147
hg19_v2_chr1_+_27158483_27158501	0.0275569	GLI2	ENST00000374141.2|ZDHHC18|ENSG00000204160.7|zinc finger, DHHC-type containing 18
hg19_v2_chr21_+_46494466_46494543	0.027554	GLI2	ENST00000539173.1|ADARB1|ENSG00000197381.11|adenosine deaminase, RNA-specific, B1 	ENST00000389863.4|ADARB1|ENSG00000197381.11|adenosine deaminase, RNA-specific, B1 	ENST00000348831.4|ADARB1|ENSG00000197381.11|adenosine deaminase, RNA-specific, B1 	ENST00000437626.1|ADARB1|ENSG00000197381.11|adenosine deaminase, RNA-specific, B1
hg19_v2_chr12_-_11422739_11422812	0.0274207	GLI2	ENST00000279573.7|PRB3|ENSG00000197870.8|proline-rich protein BstNI subfamily 3
hg19_v2_chr19_+_50180409_50180501	0.0273616	GLI2	ENST00000391851.4|PRMT1|ENSG00000126457.16|protein arginine methyltransferase 1
hg19_v2_chr19_-_42758040_42758064	0.0272306	GLI2	ENST00000593944.1|ERF|ENSG00000105722.5|Ets2 repressor factor
hg19_v2_chr5_+_80597419_80597448	0.0271321	GLI2	ENST00000254037.2|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9 	ENST00000407610.3|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9 	ENST00000380199.5|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9
hg19_v2_chr20_-_2781222_2781302	0.0269249	GLI2	ENST00000380605.2|CPXM1|ENSG00000088882.7|carboxypeptidase X (M14 family), member 1
hg19_v2_chr17_-_35716019_35716079	0.0268678	GLI2	ENST00000591148.1|ACACA|ENSG00000132142.15|acetyl-CoA carboxylase alpha 	ENST00000394406.2|ACACA|ENSG00000132142.15|acetyl-CoA carboxylase alpha 	ENST00000394403.1|ACACA|ENSG00000132142.15|acetyl-CoA carboxylase alpha
hg19_v2_chr17_-_76274572_76274581	0.0268263	GLI2	ENST00000374945.1|RP11-219G17.4|ENSG00000204277.1|RP11-219G17.4
hg19_v2_chrX_-_129402857_129402880	0.0266759	GLI2	ENST00000447817.1|ZNF280C|ENSG00000056277.11|zinc finger protein 280C 	ENST00000370978.4|ZNF280C|ENSG00000056277.11|zinc finger protein 280C
hg19_v2_chr5_+_64920543_64920592	0.0265443	GLI2	ENST00000399438.3|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000510585.2|CTC-534A2.2|ENSG00000253251.2|CDNA FLJ26957 fis, clone SLV00486; Uncharacterized protein
hg19_v2_chr17_-_39203519_39203568	0.0264801	GLI2	ENST00000542137.1|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1 	ENST00000391419.3|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1
hg19_v2_chr22_-_37505588_37505607	0.0264668	GLI2	ENST00000406856.1|TMPRSS6|ENSG00000187045.12|transmembrane protease, serine 6
hg19_v2_chrX_-_7066159_7066231	0.026465	GLI2	ENST00000486446.2|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000412827.2|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000424830.2|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000381077.5|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000540122.1|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1
hg19_v2_chr3_+_11196206_11196220	0.0264007	GLI2	ENST00000431010.2|HRH1|ENSG00000196639.6|histamine receptor H1
hg19_v2_chr2_+_26467762_26467817	0.0263927	GLI2	ENST00000317799.5|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000405867.3|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000537713.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
hg19_v2_chr3_-_25824925_25825042	0.026131	GLI2	ENST00000396649.3|NGLY1|ENSG00000151092.12|N-glycanase 1 	ENST00000428257.1|NGLY1|ENSG00000151092.12|N-glycanase 1 	ENST00000280700.5|NGLY1|ENSG00000151092.12|N-glycanase 1
hg19_v2_chr12_-_53715328_53715415	0.0260797	GLI2	ENST00000547757.1|AAAS|ENSG00000094914.8|achalasia, adrenocortical insufficiency, alacrimia 	ENST00000394384.3|AAAS|ENSG00000094914.8|achalasia, adrenocortical insufficiency, alacrimia 	ENST00000209873.4|AAAS|ENSG00000094914.8|achalasia, adrenocortical insufficiency, alacrimia
hg19_v2_chr8_+_21916710_21916734	0.0260103	GLI2	ENST00000523266.1|DMTN|ENSG00000158856.13|dematin actin binding protein 	ENST00000519907.1|DMTN|ENSG00000158856.13|dematin actin binding protein
hg19_v2_chr10_-_112064665_112064737	0.0259239	GLI2	ENST00000369603.5|SMNDC1|ENSG00000119953.8|survival motor neuron domain containing 1
hg19_v2_chr17_+_80009330_80009379	0.0258836	GLI2	ENST00000580716.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000583961.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1
hg19_v2_chr5_-_1112141_1112164	0.0258748	GLI2	ENST00000264930.5|SLC12A7|ENSG00000113504.15|solute carrier family 12 (potassium/chloride transporter), member 7
hg19_v2_chrX_-_102348017_102348157	0.0258621	GLI2	ENST00000425644.1|NXF3|ENSG00000147206.12|nuclear RNA export factor 3 	ENST00000395065.3|NXF3|ENSG00000147206.12|nuclear RNA export factor 3 	ENST00000425463.2|NXF3|ENSG00000147206.12|nuclear RNA export factor 3
hg19_v2_chr17_-_3496171_3496171	0.0257327	GLI2	ENST00000399756.4|TRPV1|ENSG00000196689.6|transient receptor potential cation channel, subfamily V, member 1
hg19_v2_chr13_+_115047053_115047095	0.0256443	GLI2	ENST00000375299.3|UPF3A|ENSG00000169062.10|UPF3 regulator of nonsense transcripts homolog A (yeast)
hg19_v2_chr14_+_37667230_37667304	0.0255494	GLI2	ENST00000556451.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000556753.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000396294.2|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1
hg19_v2_chr19_-_42806444_42806500	0.0255494	GLI2	ENST00000594989.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr14_+_37667118_37667192	0.0254597	GLI2	ENST00000556615.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000327441.7|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000536774.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1
hg19_v2_chr11_-_113345995_113346016	0.0254413	GLI2	ENST00000355319.2|DRD2|ENSG00000149295.9|dopamine receptor D2 	ENST00000542616.1|DRD2|ENSG00000149295.9|dopamine receptor D2
hg19_v2_chr14_-_23058063_23058175	0.0253964	GLI2	ENST00000538631.1|DAD1|ENSG00000129562.6|defender against cell death 1 	ENST00000543337.1|DAD1|ENSG00000129562.6|defender against cell death 1 	ENST00000250498.4|DAD1|ENSG00000129562.6|defender against cell death 1
hg19_v2_chrX_+_107334895_107334934	0.0253866	GLI2	ENST00000372232.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase 	ENST00000345734.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase 	ENST00000372254.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase
hg19_v2_chr16_+_68573640_68573698	0.0253618	GLI2	ENST00000398253.2|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein 	ENST00000573161.1|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein
hg19_v2_chr3_-_195538760_195538775	0.0252989	GLI2	ENST00000475231.1|MUC4|ENSG00000145113.17|mucin 4, cell surface associated
hg19_v2_chr19_+_56159421_56159433	0.0252856	GLI2	ENST00000587213.1|CCDC106|ENSG00000173581.3|coiled-coil domain containing 106
hg19_v2_chr1_-_2564450_2564481	0.0251438	GLI2	ENST00000288709.6|MMEL1|ENSG00000142606.11|membrane metallo-endopeptidase-like 1
hg19_v2_chr19_+_572543_572579	0.0250999	GLI2	ENST00000333511.3|BSG|ENSG00000172270.14|basigin (Ok blood group) 	ENST00000573216.1|BSG|ENSG00000172270.14|basigin (Ok blood group) 	ENST00000353555.4|BSG|ENSG00000172270.14|basigin (Ok blood group)
hg19_v2_chr19_+_34663397_34663473	0.0248979	GLI2	ENST00000540746.2|LSM14A|ENSG00000257103.4|LSM14A, SCD6 homolog A (S. cerevisiae) 	ENST00000544216.3|LSM14A|ENSG00000257103.4|LSM14A, SCD6 homolog A (S. cerevisiae) 	ENST00000433627.5|LSM14A|ENSG00000257103.4|LSM14A, SCD6 homolog A (S. cerevisiae)
hg19_v2_chr5_+_140019004_140019068	0.0247773	GLI2	ENST00000394671.3|TMCO6|ENSG00000113119.8|transmembrane and coiled-coil domains 6 	ENST00000511410.1|TMCO6|ENSG00000113119.8|transmembrane and coiled-coil domains 6 	ENST00000537378.1|TMCO6|ENSG00000113119.8|transmembrane and coiled-coil domains 6
hg19_v2_chr16_+_84224740_84224746	0.0246522	GLI2	ENST00000268624.3|ADAD2|ENSG00000140955.6|adenosine deaminase domain containing 2
hg19_v2_chr6_-_169563013_169563043	0.0245381	GLI2	ENST00000439703.1|RP11-417E7.1|ENSG00000223485.1|RP11-417E7.1
hg19_v2_chr1_-_241520385_241520457	0.0244485	GLI2	ENST00000366564.1|RGS7|ENSG00000182901.11|regulator of G-protein signaling 7
hg19_v2_chr22_+_32149927_32150081	0.0243437	GLI2	ENST00000437411.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000535622.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000536766.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400242.3|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000266091.3|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400249.2|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400246.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000382105.2|DEPDC5|ENSG00000100150.12|DEP domain containing 5
hg19_v2_chr12_-_112847354_112847457	0.0242971	GLI2	ENST00000550566.2|RPL6|ENSG00000089009.11|ribosomal protein L6 	ENST00000553213.2|RPL6|ENSG00000089009.11|ribosomal protein L6 	ENST00000424576.2|RPL6|ENSG00000089009.11|ribosomal protein L6 	ENST00000202773.9|RPL6|ENSG00000089009.11|ribosomal protein L6
hg19_v2_chr12_-_110318263_110318320	0.0242643	GLI2	ENST00000318348.4|GLTP|ENSG00000139433.5|glycolipid transfer protein
hg19_v2_chr11_-_414948_415017	0.0242418	GLI2	ENST00000530494.1|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain 	ENST00000528209.1|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain 	ENST00000431843.2|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain 	ENST00000528058.1|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
hg19_v2_chr14_+_105391181_105391241	0.0239304	GLI2	ENST00000557573.1|PLD4|ENSG00000166428.8|phospholipase D family, member 4
hg19_v2_chr19_-_38397228_38397266	0.0238654	GLI2	ENST00000447313.2|WDR87|ENSG00000171804.5|WD repeat domain 87
hg19_v2_chr15_-_78526942_78527049	0.0238165	GLI2	ENST00000258873.4|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
hg19_v2_chrX_+_49091920_49091942	0.0237412	GLI2	ENST00000376227.3|CCDC22|ENSG00000101997.8|coiled-coil domain containing 22
hg19_v2_chr4_+_158142750_158142836	0.0234834	GLI2	ENST00000505888.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2 	ENST00000449365.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2
hg19_v2_chr22_+_41258250_41258269	0.0234661	GLI2	ENST00000544094.1|XPNPEP3|ENSG00000196236.8|X-prolyl aminopeptidase (aminopeptidase P) 3, putative
hg19_v2_chr2_+_233925038_233925062	0.0234063	GLI2	ENST00000451407.1|INPP5D|ENSG00000168918.9|inositol polyphosphate-5-phosphatase, 145kDa
hg19_v2_chr22_+_31488433_31488454	0.0233958	GLI2	ENST00000455608.1|SMTN|ENSG00000183963.14|smoothelin
hg19_v2_chr3_-_195538728_195538754	0.0233839	GLI2	ENST00000349607.4|MUC4|ENSG00000145113.17|mucin 4, cell surface associated 	ENST00000346145.4|MUC4|ENSG00000145113.17|mucin 4, cell surface associated
hg19_v2_chr17_+_4710391_4710500	0.02332	GLI2	ENST00000263088.6|PLD2|ENSG00000129219.9|phospholipase D2 	ENST00000572940.1|PLD2|ENSG00000129219.9|phospholipase D2
hg19_v2_chr3_-_118753566_118753582	0.0231559	GLI2	ENST00000491903.1|IGSF11|ENSG00000144847.8|immunoglobulin superfamily, member 11
hg19_v2_chr20_-_9819674_9819728	0.0231397	GLI2	ENST00000378429.3|PAK7|ENSG00000101349.12|p21 protein (Cdc42/Rac)-activated kinase 7
hg19_v2_chr11_-_65686496_65686555	0.0231232	GLI2	ENST00000449692.3|C11orf68|ENSG00000175573.6|chromosome 11 open reading frame 68
hg19_v2_chr2_-_197041044_197041058	0.022898	GLI2	ENST00000420683.1|STK17B|ENSG00000081320.6|serine/threonine kinase 17b
hg19_v2_chrX_-_152989499_152989527	0.022797	GLI2	ENST00000423827.1|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31
hg19_v2_chr5_+_115387163_115387163	0.0226798	GLI2	ENST00000601302.2|ARL14EPL|ENSG00000268223.2|ADP-ribosylation factor-like 14 effector protein-like
hg19_v2_chr1_-_243417762_243417788	0.0226657	GLI2	ENST00000522191.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr13_+_100258907_100258953	0.0226398	GLI2	ENST00000376355.3|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000376360.1|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000444838.2|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000376354.1|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000339105.4|CLYBL|ENSG00000125246.11|citrate lyase beta like
hg19_v2_chr11_-_86383650_86383678	0.0226252	GLI2	ENST00000526944.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial 	ENST00000530335.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial 	ENST00000543262.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial 	ENST00000524826.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial
hg19_v2_chr19_+_56989609_56989625	0.022625	GLI2	ENST00000601875.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head)
hg19_v2_chr6_-_34073743_34073761	0.0225301	GLI2	ENST00000609222.1|GRM4|ENSG00000124493.9|glutamate receptor, metabotropic 4
hg19_v2_chr3_+_105085734_105085760	0.0224516	GLI2	ENST00000306107.5|ALCAM|ENSG00000170017.8|activated leukocyte cell adhesion molecule
hg19_v2_chr20_-_6103666_6103737	0.0223925	GLI2	ENST00000536936.1|FERMT1|ENSG00000101311.11|fermitin family member 1
hg19_v2_chr19_+_10982189_10982272	0.0222048	GLI2	ENST00000327064.4|CARM1|ENSG00000142453.7|coactivator-associated arginine methyltransferase 1 	ENST00000588947.1|CARM1|ENSG00000142453.7|coactivator-associated arginine methyltransferase 1
hg19_v2_chr12_-_122018346_122018389	0.0221954	GLI2	ENST00000377069.4|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B
hg19_v2_chr4_-_168155417_168155483	0.0219265	GLI2	ENST00000511269.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000506697.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000512042.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr12_+_57853918_57853934	0.0219252	GLI2	ENST00000532291.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000543426.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000228682.2|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000546141.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1
hg19_v2_chr7_+_76101379_76101379	0.0219244	GLI2	ENST00000429179.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila)
hg19_v2_chr1_-_153522562_153522612	0.021836	GLI2	ENST00000368714.1|S100A4|ENSG00000196154.7|S100 calcium binding protein A4
hg19_v2_chr5_+_80597453_80597475	0.0216646	GLI2	ENST00000438268.2|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9
hg19_v2_chr2_-_24308051_24308085	0.0215596	GLI2	ENST00000238721.4|TP53I3|ENSG00000115129.9|tumor protein p53 inducible protein 3 	ENST00000335934.4|TP53I3|ENSG00000115129.9|tumor protein p53 inducible protein 3
hg19_v2_chr12_+_4671352_4671390	0.0214439	GLI2	ENST00000542744.1|DYRK4|ENSG00000010219.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
hg19_v2_chr11_+_111473108_111473226	0.0214302	GLI2	ENST00000304987.3|SIK2|ENSG00000170145.4|salt-inducible kinase 2
hg19_v2_chr3_+_16926441_16926463	0.021381	GLI2	ENST00000418129.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2 	ENST00000396755.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2
hg19_v2_chr3_+_112930387_112930431	0.0211529	GLI2	ENST00000485230.1|BOC|ENSG00000144857.10|BOC cell adhesion associated, oncogene regulated
hg19_v2_chr1_+_104198377_104198377	0.021147	GLI2	ENST00000370083.4|AMY1A|ENSG00000237763.5|amylase, alpha 1A (salivary)
hg19_v2_chr2_-_237123244_237123244	0.0209204	GLI2	ENST00000447030.1|ASB18|ENSG00000182177.9|ankyrin repeat and SOCS box containing 18
hg19_v2_chr3_+_129158926_129159006	0.0208318	GLI2	ENST00000347300.2|IFT122|ENSG00000163913.7|intraflagellar transport 122 homolog (Chlamydomonas) 	ENST00000296266.3|IFT122|ENSG00000163913.7|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v2_chr3_-_3221358_3221394	0.0206635	GLI2	ENST00000424814.1|CRBN|ENSG00000113851.9|cereblon 	ENST00000450014.1|CRBN|ENSG00000113851.9|cereblon 	ENST00000231948.4|CRBN|ENSG00000113851.9|cereblon 	ENST00000432408.2|CRBN|ENSG00000113851.9|cereblon
hg19_v2_chr16_+_55690161_55690189	0.0206518	GLI2	ENST00000568655.1|SLC6A2|ENSG00000103546.14|solute carrier family 6 (neurotransmitter transporter), member 2
hg19_v2_chr22_-_19419205_19419280	0.0206414	GLI2	ENST00000340170.4|HIRA|ENSG00000100084.10|histone cell cycle regulator 	ENST00000263208.5|HIRA|ENSG00000100084.10|histone cell cycle regulator
hg19_v2_chr2_+_233390863_233390878	0.0204332	GLI2	ENST00000449596.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000543200.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle)
hg19_v2_chrX_+_23685653_23685681	0.0202888	GLI2	ENST00000379331.3|PRDX4|ENSG00000123131.8|peroxiredoxin 4
hg19_v2_chr1_+_215255136_215255149	0.0202392	GLI2	ENST00000478774.1|KCNK2|ENSG00000082482.9|potassium channel, subfamily K, member 2
hg19_v2_chr17_+_80009741_80009834	0.0202231	GLI2	ENST00000578552.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000320548.4|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000581578.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000583885.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000583641.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000581418.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000355130.2|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000306823.6|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000392358.2|GPS1|ENSG00000169727.8|G protein pathway suppressor 1
hg19_v2_chrX_-_52683950_52683950	0.0202122	GLI2	ENST00000298181.5|SSX7|ENSG00000187754.8|synovial sarcoma, X breakpoint 7
hg19_v2_chr3_-_23958506_23958556	0.0201808	GLI2	ENST00000425478.2|NKIRAS1|ENSG00000197885.6|NFKB inhibitor interacting Ras-like 1
hg19_v2_chr14_+_79745682_79745704	0.0196364	GLI2	ENST00000557594.1|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr1_-_16344500_16344568	0.0195217	GLI2	ENST00000406363.2|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular) 	ENST00000411503.1|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular) 	ENST00000545268.1|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular) 	ENST00000487046.1|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular)
hg19_v2_chr19_-_55791540_55791549	0.0194302	GLI2	ENST00000433386.2|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr17_-_1029866_1029912	0.0193807	GLI2	ENST00000570525.1|ABR|ENSG00000159842.10|active BCR-related
hg19_v2_chr5_+_154238096_154238119	0.0193807	GLI2	ENST00000517568.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000524105.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000285896.6|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8
hg19_v2_chr10_+_88414298_88414314	0.0192635	GLI2	ENST00000372071.2|OPN4|ENSG00000122375.7|opsin 4
hg19_v2_chr8_-_17533838_17533865	0.018854	GLI2	ENST00000400046.1|MTUS1|ENSG00000129422.9|microtubule associated tumor suppressor 1
hg19_v2_chr4_-_186732048_186732225	0.0188499	GLI2	ENST00000448662.2|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000439049.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000420158.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000431808.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000319471.9|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr2_+_233924548_233924677	0.0188201	GLI2	ENST00000422935.1|INPP5D|ENSG00000168918.9|inositol polyphosphate-5-phosphatase, 145kDa
hg19_v2_chr9_+_93589734_93589770	0.0187893	GLI2	ENST00000375746.1|SYK|ENSG00000165025.10|spleen tyrosine kinase
hg19_v2_chr20_+_1246908_1246999	0.018723	GLI2	ENST00000381873.3|SNPH|ENSG00000101298.9|syntaphilin 	ENST00000381867.1|SNPH|ENSG00000101298.9|syntaphilin
hg19_v2_chr9_-_113800341_113800373	0.0186825	GLI2	ENST00000358883.4|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr19_+_45445491_45445513	0.0183958	GLI2	ENST00000592954.1|APOC4|ENSG00000267467.2|apolipoprotein C-IV 	ENST00000419266.2|APOC4|ENSG00000267467.2|apolipoprotein C-IV 	ENST00000589057.1|APOC4-APOC2|ENSG00000224916.4|APOC4-APOC2 readthrough (NMD candidate)
hg19_v2_chr16_-_11681023_11681145	0.0182115	GLI2	ENST00000570904.1|LITAF|ENSG00000189067.8|lipopolysaccharide-induced TNF factor 	ENST00000574701.1|LITAF|ENSG00000189067.8|lipopolysaccharide-induced TNF factor
hg19_v2_chr5_+_149877440_149877489	0.0181316	GLI2	ENST00000518299.1|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr8_-_41655107_41655159	0.0181064	GLI2	ENST00000347528.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000289734.7|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000379758.2|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396945.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396942.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000352337.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic
hg19_v2_chr12_-_48151938_48151973	0.01801	GLI2	ENST00000495953.2|RAPGEF3|ENSG00000079337.11|Rap guanine nucleotide exchange factor (GEF) 3
hg19_v2_chr5_-_132113036_132113061	0.0180006	GLI2	ENST00000378706.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chrX_+_24072833_24072907	0.0179583	GLI2	ENST00000253039.4|EIF2S3|ENSG00000130741.6|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
hg19_v2_chrX_-_130037162_130037190	0.017934	GLI2	ENST00000432489.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2
hg19_v2_chr10_+_124221036_124221047	0.0178868	GLI2	ENST00000368984.3|HTRA1|ENSG00000166033.7|HtrA serine peptidase 1
hg19_v2_chr19_-_49314269_49314293	0.0178861	GLI2	ENST00000545387.2|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000316273.6|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000402551.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000598162.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000599246.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial
hg19_v2_chr1_-_32110467_32110491	0.0178739	GLI2	ENST00000440872.2|PEF1|ENSG00000162517.8|penta-EF-hand domain containing 1 	ENST00000373703.4|PEF1|ENSG00000162517.8|penta-EF-hand domain containing 1
hg19_v2_chr16_+_89979826_89979826	0.0176509	GLI2	ENST00000555427.1|MC1R|ENSG00000258839.2|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
hg19_v2_chr20_+_62327996_62328021	0.017604	GLI2	ENST00000369996.1|TNFRSF6B|ENSG00000243509.4|tumor necrosis factor receptor superfamily, member 6b, decoy
hg19_v2_chr5_-_150284532_150284549	0.0175701	GLI2	ENST00000394226.2|ZNF300|ENSG00000145908.8|zinc finger protein 300 	ENST00000446148.2|ZNF300|ENSG00000145908.8|zinc finger protein 300 	ENST00000274599.5|ZNF300|ENSG00000145908.8|zinc finger protein 300 	ENST00000418587.2|ZNF300|ENSG00000145908.8|zinc finger protein 300
hg19_v2_chr9_+_117085336_117085377	0.0175605	GLI2	ENST00000259396.8|ORM1|ENSG00000229314.4|orosomucoid 1 	ENST00000538816.1|ORM1|ENSG00000229314.4|orosomucoid 1
hg19_v2_chr3_+_54156570_54156627	0.0174531	GLI2	ENST00000415676.2|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3
hg19_v2_chr11_-_8986279_8986320	0.0172979	GLI2	ENST00000534025.1|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B
hg19_v2_chr1_+_41174988_41175047	0.0171637	GLI2	ENST00000372652.1|NFYC|ENSG00000066136.15|nuclear transcription factor Y, gamma
hg19_v2_chr1_+_14026671_14026705	0.0171506	GLI2	ENST00000484063.2|PRDM2|ENSG00000116731.18|PR domain containing 2, with ZNF domain
hg19_v2_chr3_+_50606901_50606967	0.017086	GLI2	ENST00000455834.1|HEMK1|ENSG00000114735.5|HemK methyltransferase family member 1
hg19_v2_chr3_-_25824872_25824913	0.0170238	GLI2	ENST00000308710.5|NGLY1|ENSG00000151092.12|N-glycanase 1
hg19_v2_chr1_-_62785054_62785125	0.0169784	GLI2	ENST00000371153.4|KANK4|ENSG00000132854.14|KN motif and ankyrin repeat domains 4
hg19_v2_chr22_+_29279552_29279586	0.0169354	GLI2	ENST00000544604.2|ZNRF3|ENSG00000183579.11|zinc and ring finger 3
hg19_v2_chr1_-_161014731_161014788	0.016823	GLI2	ENST00000368020.1|USF1|ENSG00000158773.10|upstream transcription factor 1
hg19_v2_chr3_-_52868931_52869042	0.0167743	GLI2	ENST00000486659.1|MUSTN1|ENSG00000272573.1|musculoskeletal, embryonic nuclear protein 1
hg19_v2_chr10_-_49459800_49459841	0.0167448	GLI2	ENST00000305531.3|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2
hg19_v2_chr1_-_40042416_40042470	0.0167112	GLI2	ENST00000372857.3|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form) 	ENST00000372856.3|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form) 	ENST00000531243.2|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form) 	ENST00000451091.2|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form)
hg19_v2_chr5_-_95297534_95297563	0.0166445	GLI2	ENST00000513343.1|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2 	ENST00000431061.2|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr2_+_26467825_26467847	0.0165912	GLI2	ENST00000545822.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000425035.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
hg19_v2_chr21_+_15588499_15588515	0.01646	GLI2	ENST00000400577.3|RBM11|ENSG00000185272.9|RNA binding motif protein 11
hg19_v2_chr2_-_228579305_228579342	0.0162571	GLI2	ENST00000456524.1|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3
hg19_v2_chr10_-_127511658_127511788	0.0162324	GLI2	ENST00000368774.1|UROS|ENSG00000188690.8|uroporphyrinogen III synthase 	ENST00000368778.3|UROS|ENSG00000188690.8|uroporphyrinogen III synthase
hg19_v2_chrX_-_54384425_54384495	0.0162274	GLI2	ENST00000375169.3|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3 	ENST00000354646.2|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3
hg19_v2_chr11_+_1892102_1892126	0.0162192	GLI2	ENST00000417766.1|LSP1|ENSG00000130592.9|lymphocyte-specific protein 1
hg19_v2_chr15_+_31658349_31658358	0.0161729	GLI2	ENST00000558844.1|KLF13|ENSG00000169926.5|Kruppel-like factor 13
hg19_v2_chr3_+_49449636_49449652	0.0161402	GLI2	ENST00000273590.3|TCTA|ENSG00000145022.4|T-cell leukemia translocation altered
hg19_v2_chr15_-_102192567_102192597	0.0159968	GLI2	ENST00000333202.3|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000428002.2|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000559107.1|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000347970.3|TM2D3|ENSG00000184277.8|TM2 domain containing 3
hg19_v2_chrX_-_48056199_48056233	0.0159027	GLI2	ENST00000311798.1|SSX5|ENSG00000165583.9|synovial sarcoma, X breakpoint 5 	ENST00000347757.1|SSX5|ENSG00000165583.9|synovial sarcoma, X breakpoint 5
hg19_v2_chr19_+_3708376_3708501	0.0157766	GLI2	ENST00000539908.2|TJP3|ENSG00000105289.10|tight junction protein 3
hg19_v2_chr4_-_168155730_168155740	0.0157492	GLI2	ENST00000502330.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000357154.3|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chrX_-_11369656_11369801	0.0156166	GLI2	ENST00000413512.3|ARHGAP6|ENSG00000047648.17|Rho GTPase activating protein 6
hg19_v2_chr2_-_229046361_229046373	0.0155904	GLI2	ENST00000392056.3|SPHKAP|ENSG00000153820.8|SPHK1 interactor, AKAP domain containing
hg19_v2_chr4_-_55991752_55991770	0.015481	GLI2	ENST00000263923.4|KDR|ENSG00000128052.8|kinase insert domain receptor (a type III receptor tyrosine kinase)
hg19_v2_chr10_-_46970573_46970610	0.0154152	GLI2	ENST00000374325.3|SYT15|ENSG00000204176.9|synaptotagmin XV
hg19_v2_chr11_+_60739115_60739137	0.0153876	GLI2	ENST00000344028.5|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000346437.4|CD6|ENSG00000013725.10|CD6 molecule
hg19_v2_chr2_-_71047727_71047733	0.0152881	GLI2	ENST00000272367.2|CLEC4F|ENSG00000152672.3|C-type lectin domain family 4, member F
hg19_v2_chr8_+_11561660_11561751	0.015269	GLI2	ENST00000526716.1|GATA4|ENSG00000136574.13|GATA binding protein 4 	ENST00000335135.4|GATA4|ENSG00000136574.13|GATA binding protein 4 	ENST00000528027.1|GATA4|ENSG00000136574.13|GATA binding protein 4
hg19_v2_chr16_-_3285144_3285191	0.0151404	GLI2	ENST00000431561.3|ZNF200|ENSG00000010539.7|zinc finger protein 200 	ENST00000396870.4|ZNF200|ENSG00000010539.7|zinc finger protein 200
hg19_v2_chr7_-_91875109_91875260	0.0150415	GLI2	ENST00000412043.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000430102.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000425073.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394503.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000454017.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000440209.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000413688.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000452773.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000433016.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394505.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000422347.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000458493.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000425919.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing
hg19_v2_chr22_+_25465786_25465936	0.0150225	GLI2	ENST00000401395.1|KIAA1671|ENSG00000197077.8|KIAA1671
hg19_v2_chr3_+_184081137_184081155	0.0147064	GLI2	ENST00000443489.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chr20_-_33880204_33880234	0.0146781	GLI2	ENST00000374408.3|FAM83C|ENSG00000125998.7|family with sequence similarity 83, member C
hg19_v2_chr1_-_161207953_161207975	0.0146019	GLI2	ENST00000367982.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr15_-_78526855_78526916	0.0145265	GLI2	ENST00000541759.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1 	ENST00000558130.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
hg19_v2_chr16_+_58497587_58497668	0.0144036	GLI2	ENST00000569404.1|NDRG4|ENSG00000103034.10|NDRG family member 4 	ENST00000569539.1|NDRG4|ENSG00000103034.10|NDRG family member 4 	ENST00000564126.1|NDRG4|ENSG00000103034.10|NDRG family member 4 	ENST00000565304.1|NDRG4|ENSG00000103034.10|NDRG family member 4 	ENST00000567667.1|NDRG4|ENSG00000103034.10|NDRG family member 4
hg19_v2_chr15_+_90792760_90792767	0.0141463	GLI2	ENST00000339615.5|TTLL13|ENSG00000213471.4|tubulin tyrosine ligase-like family, member 13 	ENST00000438251.1|TTLL13|ENSG00000213471.4|tubulin tyrosine ligase-like family, member 13
hg19_v2_chr7_+_2671663_2671790	0.0138431	GLI2	ENST00000407643.1|TTYH3|ENSG00000136295.10|tweety family member 3
hg19_v2_chr2_-_100759037_100759058	0.0138024	GLI2	ENST00000317233.4|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3 	ENST00000423966.1|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3 	ENST00000416492.1|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3
hg19_v2_chr17_+_12569306_12569344	0.0136659	GLI2	ENST00000425538.1|MYOCD|ENSG00000141052.13|myocardin
hg19_v2_chr3_+_100328433_100328459	0.0136449	GLI2	ENST00000273352.3|GPR128|ENSG00000144820.3|G protein-coupled receptor 128
hg19_v2_chr11_+_60739249_60739338	0.0134399	GLI2	ENST00000542157.1|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000433107.2|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000452451.2|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000352009.5|CD6|ENSG00000013725.10|CD6 molecule
hg19_v2_chr11_+_67776012_67776048	0.0132777	GLI2	ENST00000539229.1|ALDH3B1|ENSG00000006534.11|aldehyde dehydrogenase 3 family, member B1
hg19_v2_chr9_+_87285539_87285575	0.0130827	GLI2	ENST00000359847.3|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2
hg19_v2_chr15_+_45694567_45694626	0.0129698	GLI2	ENST00000559860.1|SPATA5L1|ENSG00000171763.13|spermatogenesis associated 5-like 1
hg19_v2_chr11_-_31531121_31531192	0.0128989	GLI2	ENST00000532287.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000526776.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000534812.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000529749.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000278200.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000530023.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000533642.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)
hg19_v2_chr14_+_64932210_64932226	0.0124014	GLI2	ENST00000394718.4|AKAP5|ENSG00000179841.8|A kinase (PRKA) anchor protein 5
hg19_v2_chr17_-_6554877_6554954	0.0123807	GLI2	ENST00000225728.3|MED31|ENSG00000108590.6|mediator complex subunit 31 	ENST00000575197.1|MED31|ENSG00000108590.6|mediator complex subunit 31
hg19_v2_chr10_+_112327425_112327516	0.0123058	GLI2	ENST00000361804.4|SMC3|ENSG00000108055.9|structural maintenance of chromosomes 3
hg19_v2_chr12_+_51632638_51632665	0.012072	GLI2	ENST00000549732.2|DAZAP2|ENSG00000183283.11|DAZ associated protein 2
hg19_v2_chr19_+_50180507_50180551	0.0120636	GLI2	ENST00000454376.2|PRMT1|ENSG00000126457.16|protein arginine methyltransferase 1 	ENST00000524771.1|PRMT1|ENSG00000126457.16|protein arginine methyltransferase 1
hg19_v2_chr18_+_12948000_12948057	0.0118621	GLI2	ENST00000585730.1|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae) 	ENST00000399892.2|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae) 	ENST00000589446.1|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae) 	ENST00000587761.1|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae)
hg19_v2_chr14_-_39572279_39572340	0.0116659	GLI2	ENST00000536508.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae)
hg19_v2_chr17_-_17140436_17140510	0.0116467	GLI2	ENST00000285071.4|FLCN|ENSG00000154803.8|folliculin 	ENST00000389169.5|FLCN|ENSG00000154803.8|folliculin 	ENST00000417064.1|FLCN|ENSG00000154803.8|folliculin
hg19_v2_chr22_-_25170444_25170444	0.0114522	GLI2	ENST00000533313.1|PIWIL3|ENSG00000184571.9|piwi-like RNA-mediated gene silencing 3 	ENST00000527701.1|PIWIL3|ENSG00000184571.9|piwi-like RNA-mediated gene silencing 3
hg19_v2_chr6_+_35704804_35704813	0.0114288	GLI2	ENST00000373869.3|ARMC12|ENSG00000157343.4|armadillo repeat containing 12
hg19_v2_chr12_-_57634475_57634532	0.011373	GLI2	ENST00000393825.1|NDUFA4L2|ENSG00000185633.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
hg19_v2_chr2_-_160143242_160143310	0.0111317	GLI2	ENST00000359774.4|WDSUB1|ENSG00000196151.6|WD repeat, sterile alpha motif and U-box domain containing 1
hg19_v2_chrX_+_17755563_17755618	0.0110996	GLI2	ENST00000380045.3|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila) 	ENST00000380041.3|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila) 	ENST00000380043.3|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila) 	ENST00000398080.1|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila)
hg19_v2_chr17_-_46691990_46692066	0.010935	GLI2	ENST00000576562.1|HOXB8|ENSG00000120068.5|homeobox B8
hg19_v2_chr2_+_201936458_201936467	0.0109193	GLI2	ENST00000237889.4|NDUFB3|ENSG00000119013.4|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa
hg19_v2_chr19_-_2702681_2702707	0.010805	GLI2	ENST00000382159.3|GNG7|ENSG00000176533.8|guanine nucleotide binding protein (G protein), gamma 7
hg19_v2_chrX_+_153409678_153409698	0.010756	GLI2	ENST00000369951.4|OPN1LW|ENSG00000102076.5|opsin 1 (cone pigments), long-wave-sensitive
hg19_v2_chr13_+_115000556_115000573	0.0107001	GLI2	ENST00000252458.6|CDC16|ENSG00000130177.10|cell division cycle 16
hg19_v2_chr15_+_63569785_63569824	0.0105572	GLI2	ENST00000380343.4|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit 	ENST00000560353.1|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit
hg19_v2_chr19_-_10628117_10628130	0.0105397	GLI2	ENST00000333430.4|S1PR5|ENSG00000180739.12|sphingosine-1-phosphate receptor 5
hg19_v2_chr1_-_172413195_172413225	0.0104461	GLI2	ENST00000344529.4|PIGC|ENSG00000135845.5|phosphatidylinositol glycan anchor biosynthesis, class C
hg19_v2_chr1_+_77748756_77748797	0.0104129	GLI2	ENST00000478407.1|AK5|ENSG00000154027.14|adenylate kinase 5
hg19_v2_chr12_-_118541743_118541777	0.0104053	GLI2	ENST00000359236.5|VSIG10|ENSG00000176834.9|V-set and immunoglobulin domain containing 10
hg19_v2_chr1_-_231473578_231473619	0.010302	GLI2	ENST00000360394.2|EXOC8|ENSG00000116903.6|exocyst complex component 8 	ENST00000366645.1|EXOC8|ENSG00000116903.6|exocyst complex component 8
hg19_v2_chr17_+_79213039_79213106	0.0102844	GLI2	ENST00000431388.2|C17orf89|ENSG00000224877.3|chromosome 17 open reading frame 89
hg19_v2_chr13_+_115047097_115047120	0.0101651	GLI2	ENST00000351487.5|UPF3A|ENSG00000169062.10|UPF3 regulator of nonsense transcripts homolog A (yeast)
hg19_v2_chr9_+_140149625_140149674	0.0101283	GLI2	ENST00000343053.4|NELFB|ENSG00000188986.4|negative elongation factor complex member B
hg19_v2_chr4_-_71705590_71705662	0.010085	GLI2	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr11_+_34938119_34938204	0.0100716	GLI2	ENST00000227868.4|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X 	ENST00000430469.2|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X 	ENST00000533262.1|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X
hg19_v2_chr14_-_71107921_71108085	0.00999499	GLI2	ENST00000553982.1|CTD-2540L5.5|ENSG00000259115.1|CTD-2540L5.5	ENST00000500016.1|CTD-2540L5.6|ENSG00000245466.1|CTD-2540L5.6
hg19_v2_chr15_-_75165651_75165714	0.00988283	GLI2	ENST00000562363.1|SCAMP2|ENSG00000140497.12|secretory carrier membrane protein 2 	ENST00000564529.1|SCAMP2|ENSG00000140497.12|secretory carrier membrane protein 2 	ENST00000268099.9|SCAMP2|ENSG00000140497.12|secretory carrier membrane protein 2
hg19_v2_chr11_+_71939512_71939550	0.0096397	GLI2	ENST00000540329.1|INPPL1|ENSG00000165458.9|inositol polyphosphate phosphatase-like 1
hg19_v2_chr1_-_172413226_172413248	0.0096232	GLI2	ENST00000367728.1|PIGC|ENSG00000135845.5|phosphatidylinositol glycan anchor biosynthesis, class C 	ENST00000258324.1|PIGC|ENSG00000135845.5|phosphatidylinositol glycan anchor biosynthesis, class C
hg19_v2_chr1_+_26869597_26869637	0.00940907	GLI2	ENST00000530003.1|RPS6KA1|ENSG00000117676.9|ribosomal protein S6 kinase, 90kDa, polypeptide 1
hg19_v2_chr5_-_131347583_131347870	0.00909411	GLI2	ENST00000379255.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000430403.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000544770.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000379246.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000414078.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000441995.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6
hg19_v2_chr4_-_46391367_46391436	0.00901237	GLI2	ENST00000503806.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2 	ENST00000356504.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2 	ENST00000514090.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2 	ENST00000506961.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2
hg19_v2_chr16_+_23194033_23194045	0.00894083	GLI2	ENST00000300061.2|SCNN1G|ENSG00000166828.2|sodium channel, non-voltage-gated 1, gamma subunit
hg19_v2_chr5_+_9546306_9546329	0.00889718	GLI2	ENST00000508179.1|SNHG18|ENSG00000250786.1|small nucleolar RNA host gene 18 (non-protein coding)
hg19_v2_chr11_-_65429891_65429915	0.00888891	GLI2	ENST00000527874.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A
hg19_v2_chr12_+_72148614_72148699	0.00877809	GLI2	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr18_+_77794446_77794505	0.00876289	GLI2	ENST00000262197.7|RBFA|ENSG00000101546.8|ribosome binding factor A (putative)
hg19_v2_chr3_+_54156664_54156694	0.00875702	GLI2	ENST00000474759.1|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3 	ENST00000288197.5|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3
hg19_v2_chr19_-_913160_913240	0.00866643	GLI2	ENST00000361574.5|R3HDM4|ENSG00000198858.5|R3H domain containing 4 	ENST00000587975.1|R3HDM4|ENSG00000198858.5|R3H domain containing 4
hg19_v2_chr12_-_109125285_109125372	0.00865312	GLI2	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chr10_-_116444371_116444414	0.00860783	GLI2	ENST00000533213.2|ABLIM1|ENSG00000099204.14|actin binding LIM protein 1 	ENST00000369252.4|ABLIM1|ENSG00000099204.14|actin binding LIM protein 1
hg19_v2_chr12_+_65563329_65563373	0.00852975	GLI2	ENST00000308330.2|LEMD3|ENSG00000174106.2|LEM domain containing 3
hg19_v2_chr18_+_11752040_11752117	0.00833918	GLI2	ENST00000423027.3|GNAL|ENSG00000141404.11|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v2_chr6_+_158402860_158403070	0.00810137	GLI2	ENST00000367122.2|SYNJ2|ENSG00000078269.9|synaptojanin 2 	ENST00000367121.3|SYNJ2|ENSG00000078269.9|synaptojanin 2 	ENST00000355585.4|SYNJ2|ENSG00000078269.9|synaptojanin 2 	ENST00000367113.4|SYNJ2|ENSG00000078269.9|synaptojanin 2
hg19_v2_chr12_+_3000073_3000092	0.00808052	GLI2	ENST00000397132.2|TULP3|ENSG00000078246.11|tubby like protein 3
hg19_v2_chr19_-_11347173_11347241	0.00807915	GLI2	ENST00000587656.1|DOCK6|ENSG00000130158.9|dedicator of cytokinesis 6
hg19_v2_chr14_+_96968802_96968895	0.00806858	GLI2	ENST00000556619.1|PAPOLA|ENSG00000090060.13|poly(A) polymerase alpha 	ENST00000392990.2|PAPOLA|ENSG00000090060.13|poly(A) polymerase alpha
hg19_v2_chr20_-_32891151_32891168	0.00801251	GLI2	ENST00000217426.2|AHCY|ENSG00000101444.8|adenosylhomocysteinase
hg19_v2_chr19_-_55791563_55791749	0.00799317	GLI2	ENST00000588971.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000255631.5|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587551.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr16_+_67062996_67063019	0.00793981	GLI2	ENST00000561924.2|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr20_+_2795609_2795620	0.00780179	GLI2	ENST00000554164.1|TMEM239|ENSG00000198326.8|transmembrane protein 239 	ENST00000380593.4|TMEM239|ENSG00000241690.3|CDNA FLJ26142 fis, clone TST04526; Transmembrane protein 239; Uncharacterized protein
hg19_v2_chr5_-_132113559_132113579	0.00772449	GLI2	ENST00000448933.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr21_+_37477164_37477179	0.00760482	GLI2	ENST00000422473.1|AP000688.29|ENSG00000233393.1|AP000688.29
hg19_v2_chr2_-_97304009_97304074	0.00757296	GLI2	ENST00000431828.1|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3 	ENST00000435669.1|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3 	ENST00000440133.1|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3 	ENST00000448075.1|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3
hg19_v2_chr3_-_167813672_167813763	0.00740332	GLI2	ENST00000470487.1|GOLIM4|ENSG00000173905.4|golgi integral membrane protein 4
hg19_v2_chr1_+_179263308_179263455	0.0073777	GLI2	ENST00000426956.1|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1
hg19_v2_chr3_+_113616317_113616364	0.0070891	GLI2	ENST00000440446.2|GRAMD1C|ENSG00000178075.15|GRAM domain containing 1C 	ENST00000488680.1|GRAMD1C|ENSG00000178075.15|GRAM domain containing 1C
hg19_v2_chr1_-_34630820_34630875	0.00693861	GLI2	ENST00000373381.4|CSMD2|ENSG00000121904.13|CUB and Sushi multiple domains 2
hg19_v2_chr18_+_59992514_59992525	0.006923	GLI2	ENST00000269485.7|TNFRSF11A|ENSG00000141655.11|tumor necrosis factor receptor superfamily, member 11a, NFKB activator
hg19_v2_chr7_-_43965937_43966015	0.00665505	GLI2	ENST00000455877.1|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000223341.7|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000447717.3|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000426198.1|URGCP|ENSG00000106608.12|upregulator of cell proliferation
hg19_v2_chr16_+_55690205_55690352	0.00660498	GLI2	ENST00000379906.2|SLC6A2|ENSG00000103546.14|solute carrier family 6 (neurotransmitter transporter), member 2
hg19_v2_chr12_-_93323013_93323112	0.00649773	GLI2	ENST00000322349.8|EEA1|ENSG00000102189.12|early endosome antigen 1
hg19_v2_chr20_-_33865891_33865939	0.00649106	GLI2	ENST00000540582.1|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2
hg19_v2_chr3_+_184081175_184081208	0.0064484	GLI2	ENST00000452961.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H 	ENST00000296223.3|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chr22_+_39410088_39410088	0.00641534	GLI2	ENST00000361441.4|APOBEC3C|ENSG00000244509.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
hg19_v2_chr5_-_142077569_142077611	0.00628257	GLI2	ENST00000407758.1|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic) 	ENST00000441680.2|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic) 	ENST00000419524.2|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic)
hg19_v2_chr1_-_54411255_54411290	0.00615627	GLI2	ENST00000371377.3|HSPB11|ENSG00000081870.7|heat shock protein family B (small), member 11
hg19_v2_chr19_-_37263693_37263716	0.00610961	GLI2	ENST00000591344.1|ZNF850|ENSG00000267041.1|zinc finger protein 850
hg19_v2_chr1_+_207669573_207669606	0.00607227	GLI2	ENST00000400960.2|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000534202.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr19_-_43709817_43709926	0.00590039	GLI2	ENST00000433626.2|PSG4|ENSG00000243137.3|pregnancy specific beta-1-glycoprotein 4 	ENST00000405312.3|PSG4|ENSG00000243137.3|pregnancy specific beta-1-glycoprotein 4
hg19_v2_chr1_+_150521876_150521901	0.00582158	GLI2	ENST00000369041.5|ADAMTSL4|ENSG00000143382.9|ADAMTS-like 4 	ENST00000538795.1|AL356356.1|ENSG00000225996.2|Protein LOC100996516  	ENST00000271643.4|ADAMTSL4|ENSG00000143382.9|ADAMTS-like 4
hg19_v2_chr4_+_15480828_15480868	0.00566128	GLI2	ENST00000389652.5|CC2D2A|ENSG00000048342.11|coiled-coil and C2 domain containing 2A
hg19_v2_chrX_+_24073048_24073088	0.00560619	GLI2	ENST00000423068.1|EIF2S3|ENSG00000130741.6|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
hg19_v2_chr8_-_25902876_25902936	0.00558675	GLI2	ENST00000520164.1|EBF2|ENSG00000221818.4|early B-cell factor 2
hg19_v2_chr12_-_122711968_122712008	0.00556145	GLI2	ENST00000485724.1|DIABLO|ENSG00000184047.11|diablo, IAP-binding mitochondrial protein
hg19_v2_chr3_-_192635943_192635955	0.00546325	GLI2	ENST00000392452.2|MB21D2|ENSG00000180611.6|Mab-21 domain containing 2
hg19_v2_chr3_+_184080387_184080403	0.00541972	GLI2	ENST00000455712.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chr12_+_7079944_7079999	0.00533414	GLI2	ENST00000261406.6|EMG1|ENSG00000126749.10|EMG1 N1-specific pseudouridine methyltransferase
hg19_v2_chr2_+_178977143_178977211	0.00524045	GLI2	ENST00000286070.5|RBM45|ENSG00000155636.10|RNA binding motif protein 45
hg19_v2_chr11_+_60739140_60739243	0.00523684	GLI2	ENST00000313421.7|CD6|ENSG00000013725.10|CD6 molecule
hg19_v2_chr4_+_56815102_56815147	0.00518472	GLI2	ENST00000257287.4|CEP135|ENSG00000174799.6|centrosomal protein 135kDa
hg19_v2_chr19_-_40896081_40896094	0.00510972	GLI2	ENST00000291823.2|HIPK4|ENSG00000160396.8|homeodomain interacting protein kinase 4
hg19_v2_chr15_+_42867857_42867884	0.00510355	GLI2	ENST00000290607.7|STARD9|ENSG00000159433.7|StAR-related lipid transfer (START) domain containing 9
hg19_v2_chr15_-_34875771_34875894	0.00492945	GLI2	ENST00000267731.7|GOLGA8B|ENSG00000215252.7|golgin A8 family, member B
hg19_v2_chr19_+_41107249_41107295	0.0048788	GLI2	ENST00000396819.3|LTBP4|ENSG00000090006.13|latent transforming growth factor beta binding protein 4
hg19_v2_chr20_+_43514315_43514319	0.00473229	GLI2	ENST00000353703.4|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
hg19_v2_chr14_-_24042184_24042215	0.00448653	GLI2	ENST00000544177.1|JPH4|ENSG00000092051.12|junctophilin 4
hg19_v2_chr20_+_57466461_57466482	0.00429972	GLI2	ENST00000306090.10|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr4_+_76649797_76650004	0.00395715	GLI2	ENST00000538159.1|USO1|ENSG00000138768.10|USO1 vesicle transport factor 	ENST00000514213.2|USO1|ENSG00000138768.10|USO1 vesicle transport factor
hg19_v2_chr11_+_64009072_64009220	0.00391236	GLI2	ENST00000535135.1|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa 	ENST00000394540.3|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa
hg19_v2_chr11_-_1033062_1033209	0.00386151	GLI2	ENST00000525923.1|MUC6|ENSG00000184956.11|mucin 6, oligomeric mucus/gel-forming
hg19_v2_chr14_-_64108537_64108597	0.00363218	GLI2	ENST00000554717.1|WDR89|ENSG00000140006.7|WD repeat domain 89 	ENST00000394942.2|WDR89|ENSG00000140006.7|WD repeat domain 89
hg19_v2_chr2_-_97304105_97304116	0.00357747	GLI2	ENST00000599854.1|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3 	ENST00000441706.2|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3
hg19_v2_chr3_+_50606577_50606628	0.0034898	GLI2	ENST00000434410.1|HEMK1|ENSG00000114735.5|HemK methyltransferase family member 1 	ENST00000232854.4|HEMK1|ENSG00000114735.5|HemK methyltransferase family member 1
hg19_v2_chr4_+_9226622_9226622	0.0034671	GLI2	ENST00000429667.1|USP17L13|ENSG00000232399.2|ubiquitin specific peptidase 17-like family member 13
hg19_v2_chr1_-_150602035_150602095	0.00322572	GLI2	ENST00000503241.1|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000369016.4|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000339643.5|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000271690.8|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000356527.5|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000362052.7|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000503345.1|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000369014.5|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000369009.3|ENSA|ENSG00000143420.13|endosulfine alpha
hg19_v2_chr1_-_154193091_154193119	0.00321564	GLI2	ENST00000362076.4|C1orf43|ENSG00000143612.14|chromosome 1 open reading frame 43 	ENST00000350592.3|C1orf43|ENSG00000143612.14|chromosome 1 open reading frame 43 	ENST00000368516.1|C1orf43|ENSG00000143612.14|chromosome 1 open reading frame 43
hg19_v2_chr6_+_89790459_89790479	0.00318514	GLI2	ENST00000369472.1|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr11_-_62341445_62341499	0.0029514	GLI2	ENST00000329251.4|EEF1G|ENSG00000254772.5|eukaryotic translation elongation factor 1 gamma
hg19_v2_chr15_-_75918109_75918156	0.00294486	GLI2	ENST00000567134.1|SNUPN|ENSG00000169371.9|snurportin 1 	ENST00000308588.5|SNUPN|ENSG00000169371.9|snurportin 1
hg19_v2_chr20_+_30640004_30640091	0.00286842	GLI2	ENST00000520553.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000518730.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000375852.2|HCK|ENSG00000101336.8|hemopoietic cell kinase
hg19_v2_chr17_-_46799872_46799887	0.00285893	GLI2	ENST00000290294.3|PRAC1|ENSG00000159182.3|prostate cancer susceptibility candidate 1
hg19_v2_chr19_-_55954230_55954230	0.00284792	GLI2	ENST00000376325.4|SHISA7|ENSG00000187902.7|shisa family member 7
hg19_v2_chr17_+_30677136_30677205	0.00278894	GLI2	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr14_-_94759408_94759434	0.00268736	GLI2	ENST00000554723.1|SERPINA10|ENSG00000140093.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
hg19_v2_chr6_+_35436167_35436194	0.00267716	GLI2	ENST00000322203.6|RPL10A|ENSG00000198755.6|ribosomal protein L10a
hg19_v2_chr14_-_94759361_94759403	0.00260854	GLI2	ENST00000393096.1|SERPINA10|ENSG00000140093.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
hg19_v2_chr2_-_183387064_183387129	0.00250447	GLI2	ENST00000536095.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000331935.6|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000358139.2|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000456212.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr13_+_113760098_113760121	0.00249267	GLI2	ENST00000346342.3|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator) 	ENST00000541084.1|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator) 	ENST00000375581.3|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator)
hg19_v2_chr19_-_59031118_59031193	0.00242197	GLI2	ENST00000600990.1|ZBTB45|ENSG00000119574.8|zinc finger and BTB domain containing 45
hg19_v2_chr1_+_104197912_104197912	0.00230198	GLI2	ENST00000430659.1|AMY1A|ENSG00000237763.5|amylase, alpha 1A (salivary)
hg19_v2_chr7_+_6617039_6617136	0.00224576	GLI2	ENST00000405731.3|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396713.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396707.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000335965.6|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396709.1|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000483589.1|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396706.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4
hg19_v2_chr10_-_46970474_46970515	0.00219855	GLI2	ENST00000503753.1|SYT15|ENSG00000204176.9|synaptotagmin XV 	ENST00000374321.4|SYT15|ENSG00000204176.9|synaptotagmin XV
hg19_v2_chr1_+_156551157_156551157	0.00206091	GLI2	ENST00000368237.3|TTC24|ENSG00000187862.7|tetratricopeptide repeat domain 24
hg19_v2_chr14_-_94759595_94759613	0.001943	GLI2	ENST00000261994.4|SERPINA10|ENSG00000140093.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
hg19_v2_chr22_+_50528459_50528516	0.00192115	GLI2	ENST00000395858.3|MOV10L1|ENSG00000073146.11|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) 	ENST00000395843.1|MOV10L1|ENSG00000073146.11|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)
hg19_v2_chr13_+_25670268_25670315	0.00173909	GLI2	ENST00000281589.3|PABPC3|ENSG00000151846.7|poly(A) binding protein, cytoplasmic 3
hg19_v2_chr8_-_33455268_33455325	0.00172607	GLI2	ENST00000522982.1|DUSP26|ENSG00000133878.4|dual specificity phosphatase 26 (putative)
hg19_v2_chr12_-_56710118_56710147	0.00170999	GLI2	ENST00000273308.4|CNPY2|ENSG00000257727.1|canopy FGF signaling regulator 2
hg19_v2_chr9_+_88556036_88556101	0.00165259	GLI2	ENST00000361671.5|NAA35|ENSG00000135040.11|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENST00000416045.1|NAA35|ENSG00000135040.11|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
hg19_v2_chr19_-_2051223_2051252	0.00163823	GLI2	ENST00000309340.7|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000589534.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000250896.3|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000589509.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2
hg19_v2_chr19_-_42806723_42806795	0.00155495	GLI2	ENST00000262890.3|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr5_-_132113063_132113082	0.00146318	GLI2	ENST00000378719.2|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr5_+_161275320_161275450	0.00142375	GLI2	ENST00000437025.2|GABRA1|ENSG00000022355.10|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v2_chr19_+_57946684_57946723	0.00137722	GLI2	ENST00000334181.4|ZNF749|ENSG00000186230.6|zinc finger protein 749 	ENST00000415248.1|ZNF749|ENSG00000186230.6|zinc finger protein 749
hg19_v2_chr3_-_197476560_197476577	0.0013596	GLI2	ENST00000273582.5|KIAA0226|ENSG00000145016.9|KIAA0226
hg19_v2_chr14_-_39572345_39572453	0.00132585	GLI2	ENST00000548032.2|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000556092.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000557280.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000545328.2|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000553970.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae)
hg19_v2_chr7_-_134001663_134001803	0.00128714	GLI2	ENST00000378509.4|SLC35B4|ENSG00000205060.6|solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4
hg19_v2_chr19_-_40790729_40790891	0.00114158	GLI2	ENST00000423127.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2 	ENST00000583859.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2 	ENST00000456441.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2 	ENST00000452077.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr19_+_1452188_1452221	0.00106765	GLI2	ENST00000587149.1|APC2|ENSG00000115266.7|adenomatosis polyposis coli 2
hg19_v2_chr19_+_19174795_19174833	0.00100659	GLI2	ENST00000318596.7|SLC25A42|ENSG00000181035.9|solute carrier family 25, member 42
hg19_v2_chr12_+_53689309_53689366	0.000788914	GLI2	ENST00000351500.3|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000550846.1|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000334478.4|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000549759.1|PFDN5|ENSG00000123349.9|prefoldin subunit 5
hg19_v2_chr2_-_20101385_20101417	0.000744846	GLI2	ENST00000431392.1|TTC32|ENSG00000183891.5|tetratricopeptide repeat domain 32
hg19_v2_chr1_-_204119009_204119094	0.000385646	GLI2	ENST00000444817.1|ETNK2|ENSG00000143845.10|ethanolamine kinase 2
hg19_v2_chr9_+_139743176_139743256	0.000341854	GLI2	ENST00000371661.1|PHPT1|ENSG00000054148.13|phosphohistidine phosphatase 1 	ENST00000545326.1|PHPT1|ENSG00000054148.13|phosphohistidine phosphatase 1
hg19_v2_chr8_-_133493200_133493352	0.000290873	GLI2	ENST00000388996.4|KCNQ3|ENSG00000184156.11|potassium voltage-gated channel, KQT-like subfamily, member 3
hg19_v2_chr15_+_81591757_81591780	3.30589e-05	GLI2	ENST00000558332.1|IL16|ENSG00000172349.12|interleukin 16
