hg19_v2_chr7_-_74867509_74867634	0.481893	GCUGGUG	ENST00000426327.3|GATSL2|ENSG00000198750.7|GATS protein-like 2
hg19_v2_chr12_-_98897617_98897644	0.461344	GCUGGUG	ENST00000501499.1|RP11-181C3.1|ENSG00000245017.2|Uncharacterized protein
hg19_v2_chr19_+_51815102_51815102	0.4117	GCUGGUG	ENST00000270642.8|IGLON5|ENSG00000142549.9|IgLON family member 5
hg19_v2_chr12_+_122516626_122516645	0.410715	GCUGGUG	ENST00000319080.7|MLXIP|ENSG00000175727.9|MLX interacting protein
hg19_v2_chr17_-_78450398_78450413	0.334487	GCUGGUG	ENST00000306773.4|NPTX1|ENSG00000171246.5|neuronal pentraxin I
hg19_v2_chr3_-_9291063_9291136	0.332296	GCUGGUG	ENST00000383836.3|SRGAP3|ENSG00000196220.11|SLIT-ROBO Rho GTPase activating protein 3
hg19_v2_chr3_-_114790179_114790222	0.322353	GCUGGUG	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr16_-_57318566_57318599	0.31142	GCUGGUG	ENST00000569059.1|PLLP|ENSG00000102934.5|plasmolipin 	ENST00000219207.5|PLLP|ENSG00000102934.5|plasmolipin
hg19_v2_chr4_-_2264015_2264041	0.310334	GCUGGUG	ENST00000337190.2|MXD4|ENSG00000123933.10|MAX dimerization protein 4
hg19_v2_chr9_-_14314066_14314075	0.29627	GCUGGUG	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr22_+_41697520_41697613	0.290531	GCUGGUG	ENST00000352645.4|ZC3H7B|ENSG00000100403.10|zinc finger CCCH-type containing 7B
hg19_v2_chr8_-_81787006_81787031	0.279938	GCUGGUG	ENST00000327835.3|ZNF704|ENSG00000164684.9|zinc finger protein 704
hg19_v2_chr16_-_3661578_3661618	0.276131	GCUGGUG	ENST00000294008.3|SLX4|ENSG00000188827.6|SLX4 structure-specific endonuclease subunit
hg19_v2_chr17_+_27920486_27920525	0.27177	GCUGGUG	ENST00000394859.3|ANKRD13B|ENSG00000198720.8|ankyrin repeat domain 13B
hg19_v2_chr11_-_57417405_57417423	0.270432	GCUGGUG	ENST00000524669.1|YPEL4|ENSG00000166793.6|yippee-like 4 (Drosophila) 	ENST00000300022.3|YPEL4|ENSG00000166793.6|yippee-like 4 (Drosophila)
hg19_v2_chr20_+_306221_306239	0.258403	GCUGGUG	ENST00000342665.2|SOX12|ENSG00000177732.6|SRY (sex determining region Y)-box 12
hg19_v2_chr2_-_43453734_43453751	0.258246	GCUGGUG	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr17_-_4167142_4167281	0.256619	GCUGGUG	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr4_+_184826418_184826522	0.253666	GCUGGUG	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr11_-_70507901_70507958	0.253563	GCUGGUG	ENST00000449833.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000357171.3|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000449116.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2
hg19_v2_chrX_+_118108571_118108589	0.249675	GCUGGUG	ENST00000304778.7|LONRF3|ENSG00000175556.12|LON peptidase N-terminal domain and ring finger 3
hg19_v2_chr3_+_98451275_98451361	0.235183	GCUGGUG	ENST00000265261.6|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6 	ENST00000497008.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr4_+_87856129_87856186	0.231213	GCUGGUG	ENST00000395146.4|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1 	ENST00000507468.1|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1
hg19_v2_chr17_-_43568062_43568110	0.230734	GCUGGUG	ENST00000421073.2|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000584420.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000589780.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000430334.3|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1
hg19_v2_chr17_-_17875688_17875736	0.228336	GCUGGUG	ENST00000379504.3|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000318094.10|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000540946.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000542206.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000395739.4|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000581396.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000535933.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000579586.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken)
hg19_v2_chr2_-_101034070_101034147	0.225423	GCUGGUG	ENST00000264249.3|CHST10|ENSG00000115526.6|carbohydrate sulfotransferase 10
hg19_v2_chr15_-_74988281_74988392	0.224113	GCUGGUG	ENST00000566828.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000563009.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000568176.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000566243.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000566219.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000426797.3|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000566119.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000315127.4|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3
hg19_v2_chr9_-_131534160_131534184	0.221955	GCUGGUG	ENST00000291900.2|ZER1|ENSG00000160445.6|zyg-11 related, cell cycle regulator
hg19_v2_chr3_-_53080047_53080103	0.215582	GCUGGUG	ENST00000482396.1|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1 	ENST00000358080.2|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1 	ENST00000296295.6|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1 	ENST00000394752.3|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1
hg19_v2_chr5_-_158526756_158526797	0.215431	GCUGGUG	ENST00000313708.6|EBF1|ENSG00000164330.12|early B-cell factor 1 	ENST00000517373.1|EBF1|ENSG00000164330.12|early B-cell factor 1
hg19_v2_chr6_+_41514078_41514164	0.214716	GCUGGUG	ENST00000373063.3|FOXP4|ENSG00000137166.10|forkhead box P4 	ENST00000373060.1|FOXP4|ENSG00000137166.10|forkhead box P4
hg19_v2_chr2_+_28615669_28615733	0.214517	GCUGGUG	ENST00000379619.1|FOSL2|ENSG00000075426.7|FOS-like antigen 2 	ENST00000264716.4|FOSL2|ENSG00000075426.7|FOS-like antigen 2
hg19_v2_chr11_-_118966167_118966182	0.211322	GCUGGUG	ENST00000530167.1|H2AFX|ENSG00000188486.3|H2A histone family, member X
hg19_v2_chr20_+_33292068_33292164	0.209247	GCUGGUG	ENST00000374810.3|TP53INP2|ENSG00000078804.8|tumor protein p53 inducible nuclear protein 2 	ENST00000374809.2|TP53INP2|ENSG00000078804.8|tumor protein p53 inducible nuclear protein 2 	ENST00000451665.1|TP53INP2|ENSG00000078804.8|tumor protein p53 inducible nuclear protein 2
hg19_v2_chr9_-_140351928_140351989	0.20576	GCUGGUG	ENST00000339554.3|NSMF|ENSG00000165802.15|NMDA receptor synaptonuclear signaling and neuronal migration factor
hg19_v2_chr9_-_37576226_37576250	0.205205	GCUGGUG	ENST00000432825.2|FBXO10|ENSG00000147912.8|F-box protein 10
hg19_v2_chr19_-_2783363_2783372	0.204513	GCUGGUG	ENST00000221566.2|SGTA|ENSG00000104969.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
hg19_v2_chr17_+_38474489_38474548	0.201785	GCUGGUG	ENST00000394089.2|RARA|ENSG00000131759.13|retinoic acid receptor, alpha 	ENST00000425707.3|RARA|ENSG00000131759.13|retinoic acid receptor, alpha
hg19_v2_chr20_+_32077880_32077951	0.197829	GCUGGUG	ENST00000342704.6|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000375279.2|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg19_v2_chr6_+_114178512_114178586	0.197722	GCUGGUG	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr22_+_39101728_39101763	0.197692	GCUGGUG	ENST00000216044.5|GTPBP1|ENSG00000100226.11|GTP binding protein 1 	ENST00000484657.1|GTPBP1|ENSG00000100226.11|GTP binding protein 1
hg19_v2_chr19_+_7968728_7968781	0.193585	GCUGGUG	ENST00000397981.3|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7 	ENST00000545011.1|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7 	ENST00000397983.3|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7 	ENST00000397979.3|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7
hg19_v2_chr17_-_1395954_1396106	0.192679	GCUGGUG	ENST00000359786.5|MYO1C|ENSG00000197879.10|myosin IC
hg19_v2_chr22_+_40573921_40573946	0.189505	GCUGGUG	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr1_+_36348790_36348822	0.189249	GCUGGUG	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr20_-_30795511_30795594	0.185246	GCUGGUG	ENST00000246229.4|PLAGL2|ENSG00000126003.6|pleiomorphic adenoma gene-like 2
hg19_v2_chr11_-_65381643_65381767	0.181305	GCUGGUG	ENST00000309100.3|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11 	ENST00000529839.1|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11 	ENST00000526293.1|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11
hg19_v2_chr20_+_56964169_56964182	0.180879	GCUGGUG	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr11_-_78052923_78052949	0.179675	GCUGGUG	ENST00000340149.2|GAB2|ENSG00000033327.8|GRB2-associated binding protein 2
hg19_v2_chr2_-_25475120_25475180	0.176572	GCUGGUG	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr16_-_87525651_87525651	0.174979	GCUGGUG	ENST00000268616.4|ZCCHC14|ENSG00000140948.7|zinc finger, CCHC domain containing 14
hg19_v2_chr2_+_70142189_70142223	0.173522	GCUGGUG	ENST00000264444.2|MXD1|ENSG00000059728.6|MAX dimerization protein 1
hg19_v2_chr19_+_47421933_47421933	0.17315	GCUGGUG	ENST00000404338.3|ARHGAP35|ENSG00000160007.13|Rho GTPase activating protein 35
hg19_v2_chr3_+_47324424_47324447	0.172998	GCUGGUG	ENST00000437353.1|KLHL18|ENSG00000114648.7|kelch-like family member 18 	ENST00000232766.5|KLHL18|ENSG00000114648.7|kelch-like family member 18 	ENST00000455924.2|KLHL18|ENSG00000114648.7|kelch-like family member 18
hg19_v2_chr8_+_22462145_22462330	0.17135	GCUGGUG	ENST00000308511.4|CCAR2|ENSG00000158941.12|cell cycle and apoptosis regulator 2 	ENST00000523801.1|CCAR2|ENSG00000158941.12|cell cycle and apoptosis regulator 2 	ENST00000521301.1|CCAR2|ENSG00000158941.12|cell cycle and apoptosis regulator 2
hg19_v2_chr1_+_26856236_26856292	0.170655	GCUGGUG	ENST00000374168.2|RPS6KA1|ENSG00000117676.9|ribosomal protein S6 kinase, 90kDa, polypeptide 1 	ENST00000374166.4|RPS6KA1|ENSG00000117676.9|ribosomal protein S6 kinase, 90kDa, polypeptide 1
hg19_v2_chr12_+_132195617_132195682	0.166336	GCUGGUG	ENST00000261674.4|SFSWAP|ENSG00000061936.5|splicing factor, suppressor of white-apricot homolog (Drosophila) 	ENST00000535236.1|SFSWAP|ENSG00000061936.5|splicing factor, suppressor of white-apricot homolog (Drosophila) 	ENST00000541286.1|SFSWAP|ENSG00000061936.5|splicing factor, suppressor of white-apricot homolog (Drosophila)
hg19_v2_chr16_-_84651673_84651691	0.165281	GCUGGUG	ENST00000262428.4|COTL1|ENSG00000103187.6|coactosin-like 1 (Dictyostelium)
hg19_v2_chr22_-_38240412_38240438	0.164745	GCUGGUG	ENST00000215941.4|ANKRD54|ENSG00000100124.8|ankyrin repeat domain 54
hg19_v2_chr8_+_37887772_37887859	0.164483	GCUGGUG	ENST00000338825.4|EIF4EBP1|ENSG00000187840.4|eukaryotic translation initiation factor 4E binding protein 1
hg19_v2_chr5_+_140044261_140044464	0.163047	GCUGGUG	ENST00000358337.5|WDR55|ENSG00000120314.14|WD repeat domain 55
hg19_v2_chr22_-_39096661_39096681	0.162328	GCUGGUG	ENST00000216039.5|JOSD1|ENSG00000100221.6|Josephin domain containing 1
hg19_v2_chr6_-_41909561_41909621	0.159429	GCUGGUG	ENST00000372991.4|CCND3|ENSG00000112576.8|cyclin D3
hg19_v2_chr14_-_25519095_25519280	0.157134	GCUGGUG	ENST00000419632.2|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000358326.2|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000396700.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000548724.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn)
hg19_v2_chr5_+_167718604_167718746	0.15693	GCUGGUG	ENST00000265293.4|WWC1|ENSG00000113645.9|WW and C2 domain containing 1
hg19_v2_chrX_+_9431324_9431371	0.156477	GCUGGUG	ENST00000407597.2|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000424279.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000536365.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000441088.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000380961.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000415293.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr22_-_45636650_45636714	0.153413	GCUGGUG	ENST00000336156.5|KIAA0930|ENSG00000100364.14|KIAA0930
hg19_v2_chr6_-_31628512_31628566	0.15252	GCUGGUG	ENST00000375911.1|C6orf47|ENSG00000204439.3|chromosome 6 open reading frame 47
hg19_v2_chr18_+_46065393_46065444	0.152436	GCUGGUG	ENST00000256413.3|CTIF|ENSG00000134030.9|CBP80/20-dependent translation initiation factor
hg19_v2_chr19_-_4400415_4400570	0.150655	GCUGGUG	ENST00000598564.1|SH3GL1|ENSG00000141985.5|SH3-domain GRB2-like 1 	ENST00000417295.2|SH3GL1|ENSG00000141985.5|SH3-domain GRB2-like 1 	ENST00000269886.3|SH3GL1|ENSG00000141985.5|SH3-domain GRB2-like 1
hg19_v2_chr2_-_240322643_240322661	0.148388	GCUGGUG	ENST00000345617.3|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chr15_+_65134088_65134147	0.147323	GCUGGUG	ENST00000323544.4|PLEKHO2|ENSG00000241839.5|pleckstrin homology domain containing, family O member 2 	ENST00000437723.1|AC069368.3|ENSG00000249240.2|Uncharacterized protein
hg19_v2_chr11_+_134094508_134094617	0.146434	GCUGGUG	ENST00000281187.5|VPS26B|ENSG00000151502.6|vacuolar protein sorting 26 homolog B (S. pombe) 	ENST00000525095.2|VPS26B|ENSG00000151502.6|vacuolar protein sorting 26 homolog B (S. pombe)
hg19_v2_chr19_-_10444188_10444316	0.142466	GCUGGUG	ENST00000293677.6|RAVER1|ENSG00000161847.9|ribonucleoprotein, PTB-binding 1
hg19_v2_chr15_+_75940218_75940298	0.140333	GCUGGUG	ENST00000308527.5|SNX33|ENSG00000173548.8|sorting nexin 33
hg19_v2_chr20_-_1447467_1447501	0.134479	GCUGGUG	ENST00000353088.2|NSFL1C|ENSG00000088833.13|NSFL1 (p97) cofactor (p47) 	ENST00000350991.4|NSFL1C|ENSG00000088833.13|NSFL1 (p97) cofactor (p47)
hg19_v2_chr15_+_42066632_42066722	0.134313	GCUGGUG	ENST00000457542.2|MAPKBP1|ENSG00000137802.9|mitogen-activated protein kinase binding protein 1 	ENST00000221214.6|MAPKBP1|ENSG00000137802.9|mitogen-activated protein kinase binding protein 1 	ENST00000260357.7|MAPKBP1|ENSG00000137802.9|mitogen-activated protein kinase binding protein 1 	ENST00000456763.2|MAPKBP1|ENSG00000137802.9|mitogen-activated protein kinase binding protein 1
hg19_v2_chr5_+_179159813_179159851	0.132915	GCUGGUG	ENST00000292599.3|MAML1|ENSG00000161021.7|mastermind-like 1 (Drosophila)
hg19_v2_chr14_+_21538429_21538469	0.132894	GCUGGUG	ENST00000298694.4|ARHGEF40|ENSG00000165801.5|Rho guanine nucleotide exchange factor (GEF) 40 	ENST00000555038.1|ARHGEF40|ENSG00000165801.5|Rho guanine nucleotide exchange factor (GEF) 40
hg19_v2_chr3_-_13009168_13009236	0.132647	GCUGGUG	ENST00000273221.4|IQSEC1|ENSG00000144711.9|IQ motif and Sec7 domain 1
hg19_v2_chr5_-_115910630_115910657	0.131758	GCUGGUG	ENST00000343348.6|SEMA6A|ENSG00000092421.12|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg19_v2_chr7_-_99006443_99006454	0.130464	GCUGGUG	ENST00000350498.3|PDAP1|ENSG00000106244.8|PDGFA associated protein 1
hg19_v2_chr17_+_72983674_72983768	0.130167	GCUGGUG	ENST00000337231.5|CDR2L|ENSG00000109089.7|cerebellar degeneration-related protein 2-like
hg19_v2_chr9_+_115513003_115513137	0.13007	GCUGGUG	ENST00000374232.3|SNX30|ENSG00000148158.12|sorting nexin family member 30
hg19_v2_chr16_+_68344981_68345037	0.129482	GCUGGUG	ENST00000441236.1|PRMT7|ENSG00000132600.12|protein arginine methyltransferase 7 	ENST00000348497.4|PRMT7|ENSG00000132600.12|protein arginine methyltransferase 7 	ENST00000339507.5|PRMT7|ENSG00000132600.12|protein arginine methyltransferase 7
hg19_v2_chr10_+_102295616_102295713	0.12922	GCUGGUG	ENST00000299163.6|HIF1AN|ENSG00000166135.9|hypoxia inducible factor 1, alpha subunit inhibitor
hg19_v2_chr5_-_135701164_135701225	0.128936	GCUGGUG	ENST00000355180.3|TRPC7|ENSG00000069018.13|transient receptor potential cation channel, subfamily C, member 7 	ENST00000426057.2|TRPC7|ENSG00000069018.13|transient receptor potential cation channel, subfamily C, member 7 	ENST00000513104.1|TRPC7|ENSG00000069018.13|transient receptor potential cation channel, subfamily C, member 7
hg19_v2_chr3_+_11314099_11314122	0.128378	GCUGGUG	ENST00000446450.2|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354956.5|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354449.3|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000419112.1|ATG7|ENSG00000197548.8|autophagy related 7
hg19_v2_chr9_+_470288_470336	0.128309	GCUGGUG	ENST00000382303.1|KANK1|ENSG00000107104.14|KN motif and ankyrin repeat domains 1
hg19_v2_chr15_-_43877062_43877090	0.127612	GCUGGUG	ENST00000381885.1|PPIP5K1|ENSG00000168781.17|diphosphoinositol pentakisphosphate kinase 1 	ENST00000396923.3|PPIP5K1|ENSG00000168781.17|diphosphoinositol pentakisphosphate kinase 1
hg19_v2_chr11_-_6633799_6633898	0.127601	GCUGGUG	ENST00000299424.4|TAF10|ENSG00000166337.5|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
hg19_v2_chr19_-_344786_344826	0.127458	GCUGGUG	ENST00000264819.4|MIER2|ENSG00000105556.6|mesoderm induction early response 1, family member 2
hg19_v2_chr22_-_50746027_50746082	0.126339	GCUGGUG	ENST00000425954.1|PLXNB2|ENSG00000196576.10|plexin B2 	ENST00000449103.1|PLXNB2|ENSG00000196576.10|plexin B2
hg19_v2_chr1_-_211307315_211307357	0.125613	GCUGGUG	ENST00000271751.4|KCNH1|ENSG00000143473.7|potassium voltage-gated channel, subfamily H (eag-related), member 1
hg19_v2_chr17_+_2240775_2240812	0.124749	GCUGGUG	ENST00000268989.3|SGSM2|ENSG00000141258.8|small G protein signaling modulator 2 	ENST00000426855.2|SGSM2|ENSG00000141258.8|small G protein signaling modulator 2
hg19_v2_chr17_-_27916621_27916680	0.124598	GCUGGUG	ENST00000225394.3|GIT1|ENSG00000108262.11|G protein-coupled receptor kinase interacting ArfGAP 1
hg19_v2_chr22_-_43583079_43583153	0.123489	GCUGGUG	ENST00000216129.6|TTLL12|ENSG00000100304.12|tubulin tyrosine ligase-like family, member 12
hg19_v2_chr7_-_149194843_149194922	0.123189	GCUGGUG	ENST00000458143.2|ZNF746|ENSG00000181220.11|zinc finger protein 746 	ENST00000340622.3|ZNF746|ENSG00000181220.11|zinc finger protein 746
hg19_v2_chr6_+_35310312_35310359	0.122545	GCUGGUG	ENST00000448077.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000360694.3|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000418635.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000444397.1|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta
hg19_v2_chr2_-_97535708_97535843	0.121276	GCUGGUG	ENST00000305476.5|SEMA4C|ENSG00000168758.6|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
hg19_v2_chr15_-_41408409_41408552	0.120759	GCUGGUG	ENST00000361937.3|INO80|ENSG00000128908.11|INO80 complex subunit
hg19_v2_chr8_-_116681221_116681236	0.120482	GCUGGUG	ENST00000395715.3|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr1_+_214161272_214161322	0.117943	GCUGGUG	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr1_-_113249948_113250056	0.117912	GCUGGUG	ENST00000339083.7|RHOC|ENSG00000155366.12|ras homolog family member C 	ENST00000369642.3|RHOC|ENSG00000155366.12|ras homolog family member C
hg19_v2_chr7_-_152133059_152133102	0.116503	GCUGGUG	ENST00000262189.6|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C 	ENST00000355193.2|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C
hg19_v2_chr12_+_111843749_111843763	0.115519	GCUGGUG	ENST00000341259.2|SH2B3|ENSG00000111252.6|SH2B adaptor protein 3
hg19_v2_chr9_-_130679257_130679336	0.114776	GCUGGUG	ENST00000361444.3|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 	ENST00000335791.5|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 	ENST00000343609.2|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
hg19_v2_chr20_-_46415297_46415334	0.112367	GCUGGUG	ENST00000467815.1|SULF2|ENSG00000196562.10|sulfatase 2 	ENST00000359930.4|SULF2|ENSG00000196562.10|sulfatase 2
hg19_v2_chr1_-_23886285_23886336	0.109967	GCUGGUG	ENST00000374561.5|ID3|ENSG00000117318.8|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg19_v2_chr13_-_107220455_107220517	0.109712	GCUGGUG	ENST00000400198.3|ARGLU1|ENSG00000134884.9|arginine and glutamate rich 1
hg19_v2_chr1_-_27930102_27930143	0.109612	GCUGGUG	ENST00000247087.5|AHDC1|ENSG00000126705.9|AT hook, DNA binding motif, containing 1 	ENST00000374011.2|AHDC1|ENSG00000126705.9|AT hook, DNA binding motif, containing 1
hg19_v2_chr11_+_58939965_58939965	0.108365	GCUGGUG	ENST00000227451.3|DTX4|ENSG00000110042.3|deltex homolog 4 (Drosophila)
hg19_v2_chr1_-_155211017_155211062	0.106933	GCUGGUG	ENST00000536770.1|GBA|ENSG00000177628.11|glucosidase, beta, acid 	ENST00000368373.3|GBA|ENSG00000177628.11|glucosidase, beta, acid
hg19_v2_chr6_+_158733692_158733692	0.106573	GCUGGUG	ENST00000367094.2|TULP4|ENSG00000130338.8|tubby like protein 4 	ENST00000367097.3|TULP4|ENSG00000130338.8|tubby like protein 4
hg19_v2_chr6_+_21593972_21594071	0.105745	GCUGGUG	ENST00000244745.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4 	ENST00000543472.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4
hg19_v2_chr1_+_36273743_36273773	0.104767	GCUGGUG	ENST00000373210.3|AGO4|ENSG00000134698.10|argonaute RISC catalytic component 4
hg19_v2_chr1_+_180123969_180124032	0.104034	GCUGGUG	ENST00000367602.3|QSOX1|ENSG00000116260.12|quiescin Q6 sulfhydryl oxidase 1 	ENST00000367600.5|QSOX1|ENSG00000116260.12|quiescin Q6 sulfhydryl oxidase 1
hg19_v2_chr3_-_53381539_53381654	0.102432	GCUGGUG	ENST00000606822.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000294241.6|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000607628.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A
hg19_v2_chr10_+_17271266_17271286	0.102264	GCUGGUG	ENST00000224237.5|VIM|ENSG00000026025.9|vimentin
hg19_v2_chr5_-_72744336_72744359	0.102213	GCUGGUG	ENST00000499003.3|FOXD1|ENSG00000251493.2|forkhead box D1
hg19_v2_chr11_-_65430251_65430399	0.0987385	GCUGGUG	ENST00000534283.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000527749.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000533187.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000525693.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000534558.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532879.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532999.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A
hg19_v2_chr7_+_155250824_155250824	0.098317	GCUGGUG	ENST00000297375.4|EN2|ENSG00000164778.4|engrailed homeobox 2
hg19_v2_chr1_-_153895377_153895465	0.0981012	GCUGGUG	ENST00000368655.4|GATAD2B|ENSG00000143614.7|GATA zinc finger domain containing 2B
hg19_v2_chr12_-_120806960_120806985	0.0978471	GCUGGUG	ENST00000257552.2|MSI1|ENSG00000135097.2|musashi RNA-binding protein 1
hg19_v2_chr10_+_80828774_80828792	0.0971608	GCUGGUG	ENST00000334512.5|ZMIZ1|ENSG00000108175.12|zinc finger, MIZ-type containing 1
hg19_v2_chr20_+_32581452_32581520	0.0955122	GCUGGUG	ENST00000375114.3|RALY|ENSG00000125970.7|RALY heterogeneous nuclear ribonucleoprotein 	ENST00000448364.1|RALY|ENSG00000125970.7|RALY heterogeneous nuclear ribonucleoprotein
hg19_v2_chr11_+_65837907_65837925	0.0954452	GCUGGUG	ENST00000320580.4|PACS1|ENSG00000175115.7|phosphofurin acidic cluster sorting protein 1
hg19_v2_chr8_-_41655107_41655159	0.0943137	GCUGGUG	ENST00000347528.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000289734.7|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000379758.2|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396945.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396942.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000352337.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic
hg19_v2_chr19_+_13135386_13135435	0.0935087	GCUGGUG	ENST00000360105.4|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000588228.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000591028.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr19_-_1652575_1652621	0.0915135	GCUGGUG	ENST00000587235.1|TCF3|ENSG00000071564.10|transcription factor 3 	ENST00000262965.5|TCF3|ENSG00000071564.10|transcription factor 3
hg19_v2_chr16_+_67876180_67876242	0.0898698	GCUGGUG	ENST00000303596.1|THAP11|ENSG00000168286.1|THAP domain containing 11
hg19_v2_chr17_+_4710391_4710500	0.0896853	GCUGGUG	ENST00000263088.6|PLD2|ENSG00000129219.9|phospholipase D2 	ENST00000572940.1|PLD2|ENSG00000129219.9|phospholipase D2
hg19_v2_chr2_+_148602058_148602185	0.0893209	GCUGGUG	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr2_-_26101374_26101389	0.0874364	GCUGGUG	ENST00000435504.4|ASXL2|ENSG00000143970.12|additional sex combs like 2 (Drosophila)
hg19_v2_chr11_-_75062730_75062775	0.0864058	GCUGGUG	ENST00000420843.2|ARRB1|ENSG00000137486.12|arrestin, beta 1 	ENST00000360025.3|ARRB1|ENSG00000137486.12|arrestin, beta 1
hg19_v2_chr20_+_1099233_1099315	0.0859695	GCUGGUG	ENST00000246015.4|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 	ENST00000335877.6|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 	ENST00000438768.2|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
hg19_v2_chr16_-_70472946_70473024	0.0859608	GCUGGUG	ENST00000342907.2|ST3GAL2|ENSG00000157350.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 2
hg19_v2_chr16_-_85722530_85722615	0.0858545	GCUGGUG	ENST00000253462.3|GINS2|ENSG00000131153.4|GINS complex subunit 2 (Psf2 homolog)
hg19_v2_chr1_+_114472222_114472377	0.0854147	GCUGGUG	ENST00000369558.1|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1 	ENST00000369561.4|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr17_+_4736627_4736720	0.0852032	GCUGGUG	ENST00000355280.6|MINK1|ENSG00000141503.11|misshapen-like kinase 1 	ENST00000347992.7|MINK1|ENSG00000141503.11|misshapen-like kinase 1
hg19_v2_chr17_+_27717415_27717618	0.0849831	GCUGGUG	ENST00000583121.1|TAOK1|ENSG00000160551.5|TAO kinase 1 	ENST00000261716.3|TAOK1|ENSG00000160551.5|TAO kinase 1
hg19_v2_chr11_+_66234216_66234424	0.0842769	GCUGGUG	ENST00000349459.6|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3 	ENST00000320740.7|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3 	ENST00000524466.1|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3 	ENST00000526296.1|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3
hg19_v2_chr17_+_36861735_36861795	0.0835326	GCUGGUG	ENST00000378137.5|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 	ENST00000325718.7|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v2_chrX_-_74145273_74145319	0.0832476	GCUGGUG	ENST00000055682.6|KIAA2022|ENSG00000050030.9|KIAA2022
hg19_v2_chr1_+_40862501_40862512	0.0830043	GCUGGUG	ENST00000539317.1|SMAP2|ENSG00000084070.7|small ArfGAP2
hg19_v2_chr15_-_68521996_68522085	0.0829459	GCUGGUG	ENST00000418702.2|CLN6|ENSG00000128973.7|ceroid-lipofuscinosis, neuronal 6, late infantile, variant 	ENST00000565471.1|CLN6|ENSG00000128973.7|ceroid-lipofuscinosis, neuronal 6, late infantile, variant 	ENST00000564752.1|CLN6|ENSG00000128973.7|ceroid-lipofuscinosis, neuronal 6, late infantile, variant 	ENST00000562767.1|RP11-315D16.2|ENSG00000260007.1|Uncharacterized protein  	ENST00000566347.1|CLN6|ENSG00000128973.7|ceroid-lipofuscinosis, neuronal 6, late infantile, variant 	ENST00000249806.5|CLN6|ENSG00000128973.7|ceroid-lipofuscinosis, neuronal 6, late infantile, variant
hg19_v2_chr15_-_75744014_75744087	0.0825853	GCUGGUG	ENST00000394947.3|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A 	ENST00000565264.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A
hg19_v2_chr2_-_213403565_213403584	0.082176	GCUGGUG	ENST00000342788.4|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 	ENST00000436443.1|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4
hg19_v2_chr1_-_200992827_200992867	0.0818184	GCUGGUG	ENST00000332129.2|KIF21B|ENSG00000116852.10|kinesin family member 21B 	ENST00000422435.2|KIF21B|ENSG00000116852.10|kinesin family member 21B
hg19_v2_chr3_+_42695176_42695201	0.0818053	GCUGGUG	ENST00000232974.6|ZBTB47|ENSG00000114853.9|zinc finger and BTB domain containing 47 	ENST00000457842.3|ZBTB47|ENSG00000114853.9|zinc finger and BTB domain containing 47
hg19_v2_chr8_-_135708787_135708805	0.0808089	GCUGGUG	ENST00000520356.1|ZFAT|ENSG00000066827.11|zinc finger and AT hook domain containing 	ENST00000520727.1|ZFAT|ENSG00000066827.11|zinc finger and AT hook domain containing 	ENST00000520214.1|ZFAT|ENSG00000066827.11|zinc finger and AT hook domain containing 	ENST00000518191.1|ZFAT|ENSG00000066827.11|zinc finger and AT hook domain containing 	ENST00000429442.2|ZFAT|ENSG00000066827.11|zinc finger and AT hook domain containing
hg19_v2_chr1_+_16693578_16693760	0.0808064	GCUGGUG	ENST00000401088.4|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000471507.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000401089.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000375590.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000492354.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1
hg19_v2_chr2_-_97405775_97405816	0.0803667	GCUGGUG	ENST00000264963.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000537039.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000377079.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000426463.2|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000534882.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like
hg19_v2_chr9_-_95896550_95896570	0.0794628	GCUGGUG	ENST00000375446.4|NINJ1|ENSG00000131669.5|ninjurin 1
hg19_v2_chr15_+_92396920_92396987	0.0793442	GCUGGUG	ENST00000318445.6|SLCO3A1|ENSG00000176463.9|solute carrier organic anion transporter family, member 3A1
hg19_v2_chr3_-_48700310_48700348	0.0779653	GCUGGUG	ENST00000164024.4|CELSR3|ENSG00000008300.10|cadherin, EGF LAG seven-pass G-type receptor 3 	ENST00000544264.1|CELSR3|ENSG00000008300.10|cadherin, EGF LAG seven-pass G-type receptor 3
hg19_v2_chr22_-_18507279_18507364	0.0777837	GCUGGUG	ENST00000441493.2|MICAL3|ENSG00000243156.3|microtubule associated monooxygenase, calponin and LIM domain containing 3 	ENST00000444520.1|MICAL3|ENSG00000243156.3|microtubule associated monooxygenase, calponin and LIM domain containing 3 	ENST00000207726.7|MICAL3|ENSG00000243156.3|microtubule associated monooxygenase, calponin and LIM domain containing 3 	ENST00000429452.1|MICAL3|ENSG00000243156.3|microtubule associated monooxygenase, calponin and LIM domain containing 3
hg19_v2_chr8_+_37654424_37654436	0.0774111	GCUGGUG	ENST00000315215.7|GPR124|ENSG00000020181.13|G protein-coupled receptor 124
hg19_v2_chr12_-_32908809_32908840	0.0766688	GCUGGUG	ENST00000324868.8|YARS2|ENSG00000139131.8|tyrosyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr6_+_107811162_107811196	0.0744111	GCUGGUG	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chr16_+_77224732_77224887	0.0744043	GCUGGUG	ENST00000569610.1|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B 	ENST00000248248.3|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B 	ENST00000567291.1|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B 	ENST00000320859.6|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B 	ENST00000563612.1|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B 	ENST00000563279.1|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B
hg19_v2_chr20_-_48729670_48729694	0.074067	GCUGGUG	ENST00000371657.5|UBE2V1|ENSG00000244687.7|ubiquitin-conjugating enzyme E2 variant 1
hg19_v2_chr12_-_498620_498693	0.0733106	GCUGGUG	ENST00000399788.2|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A 	ENST00000382815.4|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A
hg19_v2_chr17_+_47074758_47074787	0.0727774	GCUGGUG	ENST00000290341.3|IGF2BP1|ENSG00000159217.5|insulin-like growth factor 2 mRNA binding protein 1
hg19_v2_chr20_-_3996036_3996153	0.0727024	GCUGGUG	ENST00000336095.6|RNF24|ENSG00000101236.12|ring finger protein 24
hg19_v2_chr9_+_100615536_100615558	0.0723565	GCUGGUG	ENST00000375123.3|FOXE1|ENSG00000178919.7|forkhead box E1 (thyroid transcription factor 2)
hg19_v2_chr17_-_9929581_9929626	0.0717476	GCUGGUG	ENST00000437099.2|GAS7|ENSG00000007237.14|growth arrest-specific 7 	ENST00000396115.2|GAS7|ENSG00000007237.14|growth arrest-specific 7
hg19_v2_chr2_+_96068436_96068539	0.0716814	GCUGGUG	ENST00000445649.1|FAHD2A|ENSG00000115042.5|fumarylacetoacetate hydrolase domain containing 2A 	ENST00000447036.1|FAHD2A|ENSG00000115042.5|fumarylacetoacetate hydrolase domain containing 2A 	ENST00000233379.4|FAHD2A|ENSG00000115042.5|fumarylacetoacetate hydrolase domain containing 2A 	ENST00000418606.1|FAHD2A|ENSG00000115042.5|fumarylacetoacetate hydrolase domain containing 2A
hg19_v2_chr13_-_72441315_72441454	0.0714269	GCUGGUG	ENST00000305425.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000313174.7|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000354591.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila)
hg19_v2_chr6_+_34759837_34759964	0.0713189	GCUGGUG	ENST00000192788.5|UHRF1BP1|ENSG00000065060.12|UHRF1 binding protein 1 	ENST00000452449.2|UHRF1BP1|ENSG00000065060.12|UHRF1 binding protein 1
hg19_v2_chr7_-_148581251_148581347	0.0710724	GCUGGUG	ENST00000478654.1|EZH2|ENSG00000106462.6|enhancer of zeste homolog 2 (Drosophila) 	ENST00000460911.1|EZH2|ENSG00000106462.6|enhancer of zeste homolog 2 (Drosophila) 	ENST00000350995.2|EZH2|ENSG00000106462.6|enhancer of zeste homolog 2 (Drosophila)
hg19_v2_chrX_+_152953505_152953554	0.0707765	GCUGGUG	ENST00000253122.5|SLC6A8|ENSG00000130821.11|solute carrier family 6 (neurotransmitter transporter), member 8
hg19_v2_chr1_-_23857698_23857733	0.0707054	GCUGGUG	ENST00000361729.2|E2F2|ENSG00000007968.6|E2F transcription factor 2
hg19_v2_chr19_-_663277_663312	0.0702031	GCUGGUG	ENST00000292363.5|RNF126|ENSG00000070423.13|ring finger protein 126
hg19_v2_chr11_+_63606373_63606418	0.0700542	GCUGGUG	ENST00000402010.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000315032.8|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377809.4|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000413835.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377810.3|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2
hg19_v2_chr9_+_131709966_131710000	0.0693128	GCUGGUG	ENST00000372577.2|NUP188|ENSG00000095319.10|nucleoporin 188kDa
hg19_v2_chr17_-_4890919_4890985	0.0677294	GCUGGUG	ENST00000572543.1|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2 	ENST00000381311.5|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2 	ENST00000348066.3|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2 	ENST00000358183.4|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2
hg19_v2_chr17_-_8055747_8055758	0.0676609	GCUGGUG	ENST00000317276.4|PER1|ENSG00000179094.9|period circadian clock 1 	ENST00000581703.1|PER1|ENSG00000179094.9|period circadian clock 1
hg19_v2_chr9_-_33264676_33264761	0.0660058	GCUGGUG	ENST00000472232.3|BAG1|ENSG00000107262.12|BCL2-associated athanogene 	ENST00000379704.2|BAG1|ENSG00000107262.12|BCL2-associated athanogene
hg19_v2_chr9_-_131940526_131940546	0.0643551	GCUGGUG	ENST00000372491.2|IER5L|ENSG00000188483.6|immediate early response 5-like
hg19_v2_chr8_+_106330920_106330979	0.063683	GCUGGUG	ENST00000407775.2|ZFPM2|ENSG00000169946.9|zinc finger protein, FOG family member 2
hg19_v2_chr8_+_23104130_23104184	0.0636091	GCUGGUG	ENST00000313219.7|CHMP7|ENSG00000147457.9|charged multivesicular body protein 7 	ENST00000519984.1|CHMP7|ENSG00000147457.9|charged multivesicular body protein 7
hg19_v2_chr6_+_41888926_41888926	0.0630104	GCUGGUG	ENST00000230340.4|BYSL|ENSG00000112578.5|bystin-like
hg19_v2_chr9_+_37422663_37422743	0.0628	GCUGGUG	ENST00000318158.6|GRHPR|ENSG00000137106.13|glyoxylate reductase/hydroxypyruvate reductase 	ENST00000607784.1|GRHPR|ENSG00000137106.13|glyoxylate reductase/hydroxypyruvate reductase
hg19_v2_chr7_-_128001658_128001749	0.0623644	GCUGGUG	ENST00000489835.2|PRRT4|ENSG00000224940.4|proline-rich transmembrane protein 4 	ENST00000464607.1|PRRT4|ENSG00000224940.4|proline-rich transmembrane protein 4 	ENST00000489517.1|PRRT4|ENSG00000224940.4|proline-rich transmembrane protein 4 	ENST00000446477.2|PRRT4|ENSG00000224940.4|proline-rich transmembrane protein 4 	ENST00000535159.1|PRRT4|ENSG00000224940.4|proline-rich transmembrane protein 4 	ENST00000435512.1|PRRT4|ENSG00000224940.4|proline-rich transmembrane protein 4 	ENST00000495931.1|PRRT4|ENSG00000224940.4|proline-rich transmembrane protein 4
hg19_v2_chr13_+_111365602_111365625	0.0620377	GCUGGUG	ENST00000333219.7|ING1|ENSG00000153487.11|inhibitor of growth family, member 1
hg19_v2_chr4_-_100575781_100575805	0.0613215	GCUGGUG	ENST00000511828.1|RP11-766F14.2|ENSG00000248713.1|Protein LOC285556
hg19_v2_chr1_-_202936394_202936408	0.059701	GCUGGUG	ENST00000367249.4|CYB5R1|ENSG00000159348.8|cytochrome b5 reductase 1
hg19_v2_chr3_+_138066539_138066580	0.059324	GCUGGUG	ENST00000289104.4|MRAS|ENSG00000158186.8|muscle RAS oncogene homolog
hg19_v2_chr17_+_17942594_17942606	0.059273	GCUGGUG	ENST00000268719.4|GID4|ENSG00000141034.5|GID complex subunit 4
hg19_v2_chr17_-_7382834_7382855	0.058382	GCUGGUG	ENST00000380599.4|ZBTB4|ENSG00000174282.7|zinc finger and BTB domain containing 4
hg19_v2_chr22_-_44894178_44894203	0.0574269	GCUGGUG	ENST00000341255.3|LDOC1L|ENSG00000188636.3|leucine zipper, down-regulated in cancer 1-like
hg19_v2_chr17_+_35294075_35294102	0.0565896	GCUGGUG	ENST00000254457.5|LHX1|ENSG00000132130.7|LIM homeobox 1
hg19_v2_chr2_+_109204909_109204928	0.0561075	GCUGGUG	ENST00000393310.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr1_+_110693103_110693126	0.0537311	GCUGGUG	ENST00000331565.4|SLC6A17|ENSG00000197106.6|solute carrier family 6 (neutral amino acid transporter), member 17
hg19_v2_chr15_-_90456156_90456198	0.0524804	GCUGGUG	ENST00000357484.5|C15orf38|ENSG00000242498.3|chromosome 15 open reading frame 38
hg19_v2_chr17_+_30593195_30593196	0.0515051	GCUGGUG	ENST00000431505.2|RHBDL3|ENSG00000141314.8|rhomboid, veinlet-like 3 (Drosophila) 	ENST00000269051.4|RHBDL3|ENSG00000141314.8|rhomboid, veinlet-like 3 (Drosophila) 	ENST00000538145.1|RHBDL3|ENSG00000141314.8|rhomboid, veinlet-like 3 (Drosophila)
hg19_v2_chr1_+_77333117_77333139	0.0514388	GCUGGUG	ENST00000477717.1|ST6GALNAC5|ENSG00000117069.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
hg19_v2_chr5_+_149109825_149109907	0.0509532	GCUGGUG	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chr6_+_118228657_118228715	0.0507935	GCUGGUG	ENST00000360388.4|SLC35F1|ENSG00000196376.6|solute carrier family 35, member F1
hg19_v2_chr1_+_117452669_117452748	0.0499933	GCUGGUG	ENST00000393203.2|PTGFRN|ENSG00000134247.9|prostaglandin F2 receptor inhibitor
hg19_v2_chr20_+_43374421_43374436	0.0496147	GCUGGUG	ENST00000372861.3|KCNK15|ENSG00000124249.5|potassium channel, subfamily K, member 15
hg19_v2_chr19_+_19496624_19496660	0.0479709	GCUGGUG	ENST00000494516.2|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000360315.3|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000252577.5|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A
hg19_v2_chr20_+_36531499_36531540	0.0471187	GCUGGUG	ENST00000373458.3|VSTM2L|ENSG00000132821.7|V-set and transmembrane domain containing 2 like 	ENST00000373461.4|VSTM2L|ENSG00000132821.7|V-set and transmembrane domain containing 2 like 	ENST00000373459.4|VSTM2L|ENSG00000132821.7|V-set and transmembrane domain containing 2 like
hg19_v2_chr19_+_56652686_56652701	0.044679	GCUGGUG	ENST00000592949.1|ZNF444|ENSG00000167685.10|zinc finger protein 444
hg19_v2_chr19_-_14316980_14316999	0.0443266	GCUGGUG	ENST00000361434.3|LPHN1|ENSG00000072071.12|latrophilin 1 	ENST00000340736.6|LPHN1|ENSG00000072071.12|latrophilin 1
hg19_v2_chr17_+_33448593_33448602	0.0440808	GCUGGUG	ENST00000158009.5|FNDC8|ENSG00000073598.5|fibronectin type III domain containing 8
hg19_v2_chr9_+_129677039_129677119	0.042886	GCUGGUG	ENST00000259351.5|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000424082.2|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000394022.3|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000394011.3|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000319107.4|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1
hg19_v2_chr3_-_49823941_49823990	0.0420424	GCUGGUG	ENST00000321599.4|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1 	ENST00000395238.1|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1 	ENST00000468463.1|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1 	ENST00000460540.1|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1
hg19_v2_chr1_+_9294822_9294889	0.0418925	GCUGGUG	ENST00000377403.2|H6PD|ENSG00000049239.8|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
hg19_v2_chr12_-_7079805_7079988	0.0409123	GCUGGUG	ENST00000536316.2|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000542912.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000440277.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000545167.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000546111.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000399433.2|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000535923.1|PHB2|ENSG00000215021.4|prohibitin 2
hg19_v2_chr7_-_98741642_98741713	0.0400284	GCUGGUG	ENST00000361368.2|SMURF1|ENSG00000198742.5|SMAD specific E3 ubiquitin protein ligase 1
hg19_v2_chr2_-_85581701_85581743	0.0396	GCUGGUG	ENST00000295802.4|RETSAT|ENSG00000042445.9|retinol saturase (all-trans-retinol 13,14-reductase)
hg19_v2_chr1_+_61547894_61547980	0.0389984	GCUGGUG	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr19_+_3880581_3880692	0.0388264	GCUGGUG	ENST00000450849.2|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type 	ENST00000301260.6|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type 	ENST00000398448.3|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type
hg19_v2_chr7_-_137686791_137686821	0.0382177	GCUGGUG	ENST00000452463.1|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2 	ENST00000330387.6|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2 	ENST00000456390.1|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2
hg19_v2_chr5_+_175792459_175792513	0.0381192	GCUGGUG	ENST00000310389.5|ARL10|ENSG00000175414.6|ADP-ribosylation factor-like 10
hg19_v2_chr17_-_7137857_7137869	0.0377851	GCUGGUG	ENST00000005340.5|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2
hg19_v2_chr3_+_38495333_38495422	0.0377506	GCUGGUG	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr9_-_131085021_131085021	0.0371608	GCUGGUG	ENST00000372890.4|TRUB2|ENSG00000167112.7|TruB pseudouridine (psi) synthase family member 2
hg19_v2_chr1_-_228135599_228135640	0.0368341	GCUGGUG	ENST00000272164.5|WNT9A|ENSG00000143816.7|wingless-type MMTV integration site family, member 9A
hg19_v2_chr19_-_49944806_49944819	0.0365232	GCUGGUG	ENST00000221485.3|SLC17A7|ENSG00000104888.5|solute carrier family 17 (vesicular glutamate transporter), member 7
hg19_v2_chr5_+_49961727_49961740	0.0362318	GCUGGUG	ENST00000505697.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000503750.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000514342.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8
hg19_v2_chr7_+_4721885_4721945	0.0356215	GCUGGUG	ENST00000328914.4|FOXK1|ENSG00000164916.9|forkhead box K1
hg19_v2_chr16_-_29910365_29910430	0.0353355	GCUGGUG	ENST00000346932.5|SEZ6L2|ENSG00000174938.10|seizure related 6 homolog (mouse)-like 2 	ENST00000350527.3|SEZ6L2|ENSG00000174938.10|seizure related 6 homolog (mouse)-like 2 	ENST00000537485.1|SEZ6L2|ENSG00000174938.10|seizure related 6 homolog (mouse)-like 2 	ENST00000568380.1|SEZ6L2|ENSG00000174938.10|seizure related 6 homolog (mouse)-like 2
hg19_v2_chr16_-_734318_734529	0.0347139	GCUGGUG	ENST00000609261.1|JMJD8|ENSG00000161999.7|jumonji domain containing 8 	ENST00000562111.1|JMJD8|ENSG00000161999.7|jumonji domain containing 8 	ENST00000562824.1|JMJD8|ENSG00000161999.7|jumonji domain containing 8 	ENST00000412368.2|JMJD8|ENSG00000161999.7|jumonji domain containing 8 	ENST00000293882.4|JMJD8|ENSG00000161999.7|jumonji domain containing 8 	ENST00000454700.1|JMJD8|ENSG00000161999.7|jumonji domain containing 8
hg19_v2_chr9_-_126692386_126692431	0.0344639	GCUGGUG	ENST00000373624.2|DENND1A|ENSG00000119522.11|DENN/MADD domain containing 1A 	ENST00000394219.3|DENND1A|ENSG00000119522.11|DENN/MADD domain containing 1A 	ENST00000373620.3|DENND1A|ENSG00000119522.11|DENN/MADD domain containing 1A 	ENST00000394215.2|DENND1A|ENSG00000119522.11|DENN/MADD domain containing 1A 	ENST00000373618.1|DENND1A|ENSG00000119522.11|DENN/MADD domain containing 1A
hg19_v2_chr17_-_39890893_39890898	0.0342519	GCUGGUG	ENST00000393939.2|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000347901.4|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000341193.5|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000310778.5|HAP1|ENSG00000173805.11|huntingtin-associated protein 1
hg19_v2_chr1_-_224033596_224033697	0.0341169	GCUGGUG	ENST00000391878.2|TP53BP2|ENSG00000143514.12|tumor protein p53 binding protein, 2 	ENST00000343537.7|TP53BP2|ENSG00000143514.12|tumor protein p53 binding protein, 2
hg19_v2_chrX_+_49126294_49126337	0.033996	GCUGGUG	ENST00000466508.1|PPP1R3F|ENSG00000049769.8|protein phosphatase 1, regulatory subunit 3F 	ENST00000438316.1|PPP1R3F|ENSG00000049769.8|protein phosphatase 1, regulatory subunit 3F 	ENST00000055335.6|PPP1R3F|ENSG00000049769.8|protein phosphatase 1, regulatory subunit 3F 	ENST00000495799.1|PPP1R3F|ENSG00000049769.8|protein phosphatase 1, regulatory subunit 3F
hg19_v2_chr13_-_76056250_76056280	0.0339661	GCUGGUG	ENST00000377636.3|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000431480.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000377625.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000425511.1|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4
hg19_v2_chr21_+_38071430_38071456	0.033875	GCUGGUG	ENST00000290399.6|SIM2|ENSG00000159263.11|single-minded family bHLH transcription factor 2
hg19_v2_chr4_+_699537_699600	0.033578	GCUGGUG	ENST00000419774.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000362003.5|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000400151.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000427463.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000470161.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3
hg19_v2_chr18_+_55102917_55102985	0.0333044	GCUGGUG	ENST00000491143.2|ONECUT2|ENSG00000119547.5|one cut homeobox 2
hg19_v2_chr4_-_142053952_142053996	0.0317039	GCUGGUG	ENST00000515673.2|RNF150|ENSG00000170153.6|ring finger protein 150
hg19_v2_chr10_+_76586348_76586400	0.0310597	GCUGGUG	ENST00000372724.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000287239.4|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000372714.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B
hg19_v2_chr22_-_41864662_41864729	0.030727	GCUGGUG	ENST00000216252.3|PHF5A|ENSG00000100410.3|PHD finger protein 5A
hg19_v2_chr1_-_154909329_154909467	0.0305907	GCUGGUG	ENST00000368467.3|PMVK|ENSG00000163344.5|phosphomevalonate kinase
hg19_v2_chr3_-_39195037_39195069	0.0304541	GCUGGUG	ENST00000273153.5|CSRNP1|ENSG00000144655.10|cysteine-serine-rich nuclear protein 1
hg19_v2_chr6_-_28220002_28220020	0.0299511	GCUGGUG	ENST00000377294.2|ZKSCAN4|ENSG00000187626.7|zinc finger with KRAB and SCAN domains 4
hg19_v2_chr19_-_46234119_46234189	0.0289825	GCUGGUG	ENST00000317683.3|FBXO46|ENSG00000177051.5|F-box protein 46
hg19_v2_chr20_+_43991668_43991853	0.0287694	GCUGGUG	ENST00000243918.5|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) 	ENST00000426004.1|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
hg19_v2_chr20_-_48770244_48770335	0.0275858	GCUGGUG	ENST00000371650.5|TMEM189|ENSG00000240849.6|transmembrane protein 189 	ENST00000371652.4|TMEM189|ENSG00000240849.6|transmembrane protein 189 	ENST00000557021.1|TMEM189|ENSG00000240849.6|transmembrane protein 189
hg19_v2_chr12_+_57984965_57985059	0.0275513	GCUGGUG	ENST00000540759.2|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000551772.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000550465.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000354947.5|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
hg19_v2_chr1_+_20208870_20209006	0.0268276	GCUGGUG	ENST00000375120.3|OTUD3|ENSG00000169914.5|OTU domain containing 3
hg19_v2_chr14_-_100070363_100070467	0.0267722	GCUGGUG	ENST00000380243.4|CCDC85C|ENSG00000205476.4|coiled-coil domain containing 85C
hg19_v2_chr6_-_3457256_3457292	0.025732	GCUGGUG	ENST00000436008.2|SLC22A23|ENSG00000137266.10|solute carrier family 22, member 23
hg19_v2_chr9_-_37034028_37034157	0.0256517	GCUGGUG	ENST00000520281.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000446742.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000522003.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000523145.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000414447.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377847.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377853.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377852.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000523241.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000520154.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000358127.4|PAX5|ENSG00000196092.8|paired box 5
hg19_v2_chr10_-_88126224_88126238	0.0251103	GCUGGUG	ENST00000327946.7|GRID1|ENSG00000182771.13|glutamate receptor, ionotropic, delta 1
hg19_v2_chr2_+_113403434_113403496	0.0250446	GCUGGUG	ENST00000272542.3|SLC20A1|ENSG00000144136.6|solute carrier family 20 (phosphate transporter), member 1
hg19_v2_chr17_+_70117153_70117174	0.0249613	GCUGGUG	ENST00000245479.2|SOX9|ENSG00000125398.5|SRY (sex determining region Y)-box 9
hg19_v2_chr17_+_38219063_38219154	0.0249253	GCUGGUG	ENST00000584985.1|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000264637.4|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000450525.2|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha
hg19_v2_chr4_-_90229142_90229217	0.0238077	GCUGGUG	ENST00000609438.1|GPRIN3|ENSG00000185477.4|GPRIN family member 3
hg19_v2_chr20_-_43438912_43439165	0.0235802	GCUGGUG	ENST00000541604.2|RIMS4|ENSG00000101098.8|regulating synaptic membrane exocytosis 4 	ENST00000372851.3|RIMS4|ENSG00000101098.8|regulating synaptic membrane exocytosis 4
hg19_v2_chr11_+_33278811_33279133	0.0231839	GCUGGUG	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr5_-_142783175_142783297	0.0212145	GCUGGUG	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr14_+_75348592_75348599	0.0211146	GCUGGUG	ENST00000334220.4|DLST|ENSG00000119689.10|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
hg19_v2_chr10_+_104474207_104474297	0.0207941	GCUGGUG	ENST00000602831.1|SFXN2|ENSG00000156398.8|sideroflexin 2 	ENST00000369893.5|SFXN2|ENSG00000156398.8|sideroflexin 2
hg19_v2_chr11_-_47600320_47600545	0.0200194	GCUGGUG	ENST00000525720.1|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4 	ENST00000531067.1|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4 	ENST00000533290.1|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4 	ENST00000529499.1|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4 	ENST00000529946.1|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4 	ENST00000526005.1|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4 	ENST00000395288.2|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4 	ENST00000534239.1|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4
hg19_v2_chr4_+_172734548_172734654	0.0200132	GCUGGUG	ENST00000506823.1|GALNTL6|ENSG00000174473.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
hg19_v2_chr7_-_103629963_103630056	0.0197536	GCUGGUG	ENST00000428762.1|RELN|ENSG00000189056.9|reelin 	ENST00000343529.5|RELN|ENSG00000189056.9|reelin 	ENST00000424685.2|RELN|ENSG00000189056.9|reelin
hg19_v2_chr7_+_90225796_90225811	0.019718	GCUGGUG	ENST00000380050.3|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr9_-_101558777_101558844	0.0194311	GCUGGUG	ENST00000375018.1|ANKS6|ENSG00000165138.12|ankyrin repeat and sterile alpha motif domain containing 6 	ENST00000353234.4|ANKS6|ENSG00000165138.12|ankyrin repeat and sterile alpha motif domain containing 6
hg19_v2_chr15_+_84322827_84322861	0.0183411	GCUGGUG	ENST00000286744.5|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3 	ENST00000567476.1|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3
hg19_v2_chr19_+_30302805_30302916	0.0180471	GCUGGUG	ENST00000262643.3|CCNE1|ENSG00000105173.9|cyclin E1 	ENST00000575243.1|CCNE1|ENSG00000105173.9|cyclin E1 	ENST00000357943.5|CCNE1|ENSG00000105173.9|cyclin E1
hg19_v2_chrX_+_106765680_106765680	0.0177495	GCUGGUG	ENST00000276185.4|FRMPD3|ENSG00000147234.6|FERM and PDZ domain containing 3
hg19_v2_chr14_-_27066636_27066701	0.0171626	GCUGGUG	ENST00000267422.7|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000344429.5|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000574031.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000465357.2|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000547619.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1
hg19_v2_chr12_+_51985001_51985037	0.0170252	GCUGGUG	ENST00000354534.6|SCN8A|ENSG00000196876.9|sodium channel, voltage gated, type VIII, alpha subunit
hg19_v2_chr19_-_38210622_38210691	0.0169692	GCUGGUG	ENST00000591664.1|ZNF607|ENSG00000198182.8|zinc finger protein 607 	ENST00000355202.4|ZNF607|ENSG00000198182.8|zinc finger protein 607
hg19_v2_chr20_+_43029911_43029941	0.0163249	GCUGGUG	ENST00000443598.2|HNF4A|ENSG00000101076.12|hepatocyte nuclear factor 4, alpha 	ENST00000316099.4|HNF4A|ENSG00000101076.12|hepatocyte nuclear factor 4, alpha 	ENST00000415691.2|HNF4A|ENSG00000101076.12|hepatocyte nuclear factor 4, alpha
hg19_v2_chr11_-_129062093_129062184	0.0162926	GCUGGUG	ENST00000310343.9|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr7_+_94285637_94285689	0.0162111	GCUGGUG	ENST00000482108.1|PEG10|ENSG00000242265.1|paternally expressed 10 	ENST00000488574.1|PEG10|ENSG00000242265.1|paternally expressed 10
hg19_v2_chr20_+_47538357_47538427	0.0154755	GCUGGUG	ENST00000371917.4|ARFGEF2|ENSG00000124198.8|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
hg19_v2_chr2_+_231729615_231729697	0.01375	GCUGGUG	ENST00000326427.6|ITM2C|ENSG00000135916.11|integral membrane protein 2C 	ENST00000335005.6|ITM2C|ENSG00000135916.11|integral membrane protein 2C 	ENST00000326407.6|ITM2C|ENSG00000135916.11|integral membrane protein 2C
hg19_v2_chr20_-_4982132_4982164	0.0122793	GCUGGUG	ENST00000338244.1|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2 	ENST00000424750.2|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2
hg19_v2_chr11_+_57227981_57228022	0.0121334	GCUGGUG	ENST00000335099.3|RTN4RL2|ENSG00000186907.3|reticulon 4 receptor-like 2
hg19_v2_chr20_-_60982330_60982375	0.0110903	GCUGGUG	ENST00000279101.5|CABLES2|ENSG00000149679.7|Cdk5 and Abl enzyme substrate 2
hg19_v2_chr11_+_131240373_131240532	0.0105873	GCUGGUG	ENST00000374791.3|NTM|ENSG00000182667.10|neurotrimin 	ENST00000436745.1|NTM|ENSG00000182667.10|neurotrimin
hg19_v2_chr16_+_69221028_69221092	0.0105162	GCUGGUG	ENST00000336278.4|SNTB2|ENSG00000168807.12|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg19_v2_chr15_-_30114622_30114706	0.00996996	GCUGGUG	ENST00000495972.2|TJP1|ENSG00000104067.12|tight junction protein 1 	ENST00000346128.6|TJP1|ENSG00000104067.12|tight junction protein 1
hg19_v2_chr22_+_29469012_29469066	0.00956837	GCUGGUG	ENST00000400335.4|KREMEN1|ENSG00000183762.8|kringle containing transmembrane protein 1 	ENST00000400338.2|KREMEN1|ENSG00000183762.8|kringle containing transmembrane protein 1
hg19_v2_chr15_+_77287426_77287487	0.00954081	GCUGGUG	ENST00000558012.1|PSTPIP1|ENSG00000140368.8|proline-serine-threonine phosphatase interacting protein 1 	ENST00000267939.5|PSTPIP1|ENSG00000140368.8|proline-serine-threonine phosphatase interacting protein 1 	ENST00000379595.3|PSTPIP1|ENSG00000140368.8|proline-serine-threonine phosphatase interacting protein 1
hg19_v2_chr9_+_115249100_115249358	0.00944119	GCUGGUG	ENST00000337530.6|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000374244.3|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000536272.1|KIAA1958|ENSG00000165185.10|KIAA1958
hg19_v2_chr22_+_31090793_31090889	0.00923156	GCUGGUG	ENST00000332585.6|OSBP2|ENSG00000184792.11|oxysterol binding protein 2 	ENST00000382310.3|OSBP2|ENSG00000184792.11|oxysterol binding protein 2 	ENST00000446658.2|OSBP2|ENSG00000184792.11|oxysterol binding protein 2
hg19_v2_chr3_-_79068594_79068627	0.00919249	GCUGGUG	ENST00000436010.2|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr8_-_41909496_41909512	0.00807621	GCUGGUG	ENST00000265713.2|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000406337.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000396930.3|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000485568.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000426524.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A
hg19_v2_chr11_-_115375107_115375283	0.0077395	GCUGGUG	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr8_-_119124045_119124097	0.00670443	GCUGGUG	ENST00000378204.2|EXT1|ENSG00000182197.6|exostosin glycosyltransferase 1
hg19_v2_chr4_-_186877502_186877563	0.00624249	GCUGGUG	ENST00000431902.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000284776.7|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000415274.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr1_+_42846443_42846502	0.00615895	GCUGGUG	ENST00000410070.2|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A 	ENST00000431473.3|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A
hg19_v2_chr6_-_17987694_17987913	0.00608764	GCUGGUG	ENST00000378814.5|KIF13A|ENSG00000137177.14|kinesin family member 13A 	ENST00000378843.2|KIF13A|ENSG00000137177.14|kinesin family member 13A 	ENST00000378826.2|KIF13A|ENSG00000137177.14|kinesin family member 13A 	ENST00000378816.5|KIF13A|ENSG00000137177.14|kinesin family member 13A 	ENST00000259711.6|KIF13A|ENSG00000137177.14|kinesin family member 13A 	ENST00000502704.1|KIF13A|ENSG00000137177.14|kinesin family member 13A
hg19_v2_chr6_+_158957431_158957468	0.00567738	GCUGGUG	ENST00000367090.3|TMEM181|ENSG00000146433.8|transmembrane protein 181
hg19_v2_chr12_-_92539614_92539673	0.00550693	GCUGGUG	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chr3_-_171178157_171178225	0.00495631	GCUGGUG	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr11_+_12695944_12695989	0.00394089	GCUGGUG	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr7_-_71801980_71802013	0.00312891	GCUGGUG	ENST00000329008.5|CALN1|ENSG00000183166.6|calneuron 1
hg19_v2_chr1_+_36690011_36690092	0.00308636	GCUGGUG	ENST00000354618.5|THRAP3|ENSG00000054118.9|thyroid hormone receptor associated protein 3 	ENST00000469141.2|THRAP3|ENSG00000054118.9|thyroid hormone receptor associated protein 3 	ENST00000478853.1|THRAP3|ENSG00000054118.9|thyroid hormone receptor associated protein 3
hg19_v2_chr1_-_149889382_149889434	0.00279274	GCUGGUG	ENST00000369145.1|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A 	ENST00000369146.3|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A
hg19_v2_chr7_-_132261253_132261323	0.00249443	GCUGGUG	ENST00000321063.4|PLXNA4|ENSG00000221866.5|plexin A4
hg19_v2_chr11_-_94964354_94964374	0.0018809	GCUGGUG	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr2_+_227700652_227700838	0.00168124	GCUGGUG	ENST00000341329.3|RHBDD1|ENSG00000144468.12|rhomboid domain containing 1 	ENST00000392062.2|RHBDD1|ENSG00000144468.12|rhomboid domain containing 1 	ENST00000437454.1|RHBDD1|ENSG00000144468.12|rhomboid domain containing 1 	ENST00000443477.1|RHBDD1|ENSG00000144468.12|rhomboid domain containing 1 	ENST00000423616.1|RHBDD1|ENSG00000144468.12|rhomboid domain containing 1 	ENST00000448992.1|RHBDD1|ENSG00000144468.12|rhomboid domain containing 1
hg19_v2_chr5_-_73937244_73937274	0.0016676	GCUGGUG	ENST00000302351.4|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000510316.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000508331.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain)
hg19_v2_chr12_-_122907091_122907186	0.00142569	GCUGGUG	ENST00000358808.2|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1 	ENST00000361654.4|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1 	ENST00000539080.1|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1 	ENST00000537178.1|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1
hg19_v2_chr17_+_41323204_41323260	0.000538195	GCUGGUG	ENST00000542611.1|NBR1|ENSG00000188554.9|neighbor of BRCA1 gene 1 	ENST00000590996.1|NBR1|ENSG00000188554.9|neighbor of BRCA1 gene 1 	ENST00000389312.4|NBR1|ENSG00000188554.9|neighbor of BRCA1 gene 1 	ENST00000589872.1|NBR1|ENSG00000188554.9|neighbor of BRCA1 gene 1
