hg19_v2_chr15_-_49447835_49447858	0.550672	GCAGCAU	ENST00000388901.5|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000299259.6|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chr12_+_105501487_105501562	0.541572	GCAGCAU	ENST00000332180.5|KIAA1033|ENSG00000136051.9|KIAA1033
hg19_v2_chr14_+_32546485_32546532	0.514236	GCAGCAU	ENST00000345122.3|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5 	ENST00000432921.1|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5 	ENST00000433497.1|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5
hg19_v2_chr3_-_167452614_167452697	0.475735	GCAGCAU	ENST00000392750.2|PDCD10|ENSG00000114209.10|programmed cell death 10 	ENST00000464360.1|PDCD10|ENSG00000114209.10|programmed cell death 10 	ENST00000492139.1|PDCD10|ENSG00000114209.10|programmed cell death 10 	ENST00000471885.1|PDCD10|ENSG00000114209.10|programmed cell death 10 	ENST00000470131.1|PDCD10|ENSG00000114209.10|programmed cell death 10
hg19_v2_chr3_+_88188254_88188254	0.474173	GCAGCAU	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr7_-_95225768_95225967	0.470125	GCAGCAU	ENST00000005178.5|PDK4|ENSG00000004799.7|pyruvate dehydrogenase kinase, isozyme 4
hg19_v2_chr11_+_109964087_109964123	0.45709	GCAGCAU	ENST00000278590.3|ZC3H12C|ENSG00000149289.6|zinc finger CCCH-type containing 12C
hg19_v2_chr8_-_66546439_66546451	0.454125	GCAGCAU	ENST00000276569.3|ARMC1|ENSG00000104442.5|armadillo repeat containing 1
hg19_v2_chr1_-_108507631_108507809	0.452253	GCAGCAU	ENST00000527011.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000370056.4|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr4_+_174089904_174089921	0.445514	GCAGCAU	ENST00000265000.4|GALNT7|ENSG00000109586.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)
hg19_v2_chr5_+_102455853_102455961	0.436658	GCAGCAU	ENST00000515845.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000321521.9|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000507921.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2
hg19_v2_chr4_+_52709229_52709345	0.426083	GCAGCAU	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr8_+_87354945_87355012	0.415349	GCAGCAU	ENST00000517970.1|WWP1|ENSG00000123124.9|WW domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr11_+_76571911_76571991	0.397942	GCAGCAU	ENST00000534206.1|ACER3|ENSG00000078124.7|alkaline ceramidase 3 	ENST00000532485.1|ACER3|ENSG00000078124.7|alkaline ceramidase 3 	ENST00000526597.1|ACER3|ENSG00000078124.7|alkaline ceramidase 3 	ENST00000533873.1|ACER3|ENSG00000078124.7|alkaline ceramidase 3 	ENST00000538157.1|ACER3|ENSG00000078124.7|alkaline ceramidase 3
hg19_v2_chr14_+_96829814_96829869	0.394811	GCAGCAU	ENST00000555181.1|GSKIP|ENSG00000100744.10|GSK3B interacting protein 	ENST00000553699.1|GSKIP|ENSG00000100744.10|GSK3B interacting protein 	ENST00000554182.1|GSKIP|ENSG00000100744.10|GSK3B interacting protein
hg19_v2_chr4_-_76598296_76598318	0.392965	GCAGCAU	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr12_+_104359576_104359601	0.384124	GCAGCAU	ENST00000392872.3|TDG|ENSG00000139372.10|thymine-DNA glycosylase 	ENST00000436021.2|TDG|ENSG00000139372.10|thymine-DNA glycosylase
hg19_v2_chr10_-_119806085_119806114	0.383931	GCAGCAU	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chrX_+_72783026_72783049	0.382321	GCAGCAU	ENST00000373504.6|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1 	ENST00000373502.5|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1
hg19_v2_chr1_-_240775447_240775462	0.37971	GCAGCAU	ENST00000318160.4|GREM2|ENSG00000180875.4|gremlin 2, DAN family BMP antagonist
hg19_v2_chr1_+_78470530_78470551	0.364366	GCAGCAU	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr2_-_219925189_219925189	0.363019	GCAGCAU	ENST00000295731.6|IHH|ENSG00000163501.6|indian hedgehog
hg19_v2_chr12_-_22697343_22697500	0.347956	GCAGCAU	ENST00000446597.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000536386.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000396028.2|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000545552.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000544930.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000333957.4|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5
hg19_v2_chr9_+_91003271_91003386	0.347641	GCAGCAU	ENST00000375859.3|SPIN1|ENSG00000106723.12|spindlin 1 	ENST00000541629.1|SPIN1|ENSG00000106723.12|spindlin 1
hg19_v2_chr17_-_45266542_45266683	0.347211	GCAGCAU	ENST00000531206.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000527547.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000446365.2|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000575483.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000066544.3|CDC27|ENSG00000004897.7|cell division cycle 27
hg19_v2_chr15_-_34502278_34502318	0.346479	GCAGCAU	ENST00000559515.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000256544.3|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000560108.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000559462.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1
hg19_v2_chr12_-_120884175_120884218	0.346257	GCAGCAU	ENST00000546954.1|TRIAP1|ENSG00000170855.3|TP53 regulated inhibitor of apoptosis 1
hg19_v2_chr15_-_65809581_65809617	0.344019	GCAGCAU	ENST00000341861.5|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8
hg19_v2_chr7_-_92463210_92463231	0.341297	GCAGCAU	ENST00000265734.4|CDK6|ENSG00000105810.5|cyclin-dependent kinase 6
hg19_v2_chr20_-_5591626_5591677	0.333226	GCAGCAU	ENST00000379019.4|GPCPD1|ENSG00000125772.8|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg19_v2_chr3_-_88108192_88108203	0.330253	GCAGCAU	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr4_+_140222609_140222742	0.330095	GCAGCAU	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr5_-_59189545_59189625	0.31773	GCAGCAU	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chrX_-_109561294_109561467	0.314135	GCAGCAU	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr14_+_53196872_53196959	0.311574	GCAGCAU	ENST00000442123.2|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein 	ENST00000354586.4|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein
hg19_v2_chr9_-_127905736_127905815	0.310394	GCAGCAU	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr12_+_66217911_66218018	0.309378	GCAGCAU	ENST00000403681.2|HMGA2|ENSG00000149948.9|high mobility group AT-hook 2
hg19_v2_chr12_-_44200052_44200136	0.305462	GCAGCAU	ENST00000548315.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000552521.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000546662.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000548403.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000546506.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1
hg19_v2_chr14_-_57735528_57735726	0.30443	GCAGCAU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr4_-_78740511_78740544	0.299549	GCAGCAU	ENST00000504123.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000264903.4|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000515441.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like
hg19_v2_chr5_-_111093406_111093458	0.294653	GCAGCAU	ENST00000379671.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr20_-_13765526_13765578	0.294463	GCAGCAU	ENST00000202816.1|ESF1|ENSG00000089048.10|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
hg19_v2_chr10_+_95653687_95653765	0.294361	GCAGCAU	ENST00000371408.3|SLC35G1|ENSG00000176273.10|solute carrier family 35, member G1 	ENST00000427197.1|SLC35G1|ENSG00000176273.10|solute carrier family 35, member G1
hg19_v2_chr17_+_30264014_30264086	0.29231	GCAGCAU	ENST00000322652.5|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit 	ENST00000580398.1|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit
hg19_v2_chr18_+_158513_158608	0.289183	GCAGCAU	ENST00000400266.3|USP14|ENSG00000101557.10|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 	ENST00000580410.1|USP14|ENSG00000101557.10|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 	ENST00000383589.2|USP14|ENSG00000101557.10|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 	ENST00000261601.7|USP14|ENSG00000101557.10|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)
hg19_v2_chr8_-_124286735_124286773	0.288576	GCAGCAU	ENST00000395571.3|ZHX1|ENSG00000165156.10|zinc fingers and homeoboxes 1
hg19_v2_chr1_-_70671216_70671303	0.282611	GCAGCAU	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr11_-_82782861_82782949	0.281187	GCAGCAU	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr5_-_132299313_132299334	0.274001	GCAGCAU	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr1_+_26438289_26438352	0.271797	GCAGCAU	ENST00000374271.4|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like 	ENST00000374269.1|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like
hg19_v2_chrX_+_95939711_95939786	0.2688	GCAGCAU	ENST00000373049.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000324765.8|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2
hg19_v2_chr11_+_77300669_77300714	0.267447	GCAGCAU	ENST00000313578.3|AQP11|ENSG00000178301.3|aquaporin 11
hg19_v2_chr12_-_31479045_31479074	0.265667	GCAGCAU	ENST00000539409.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A 	ENST00000395766.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr5_+_65440032_65440099	0.258038	GCAGCAU	ENST00000334121.6|SREK1|ENSG00000153914.11|splicing regulatory glutamine/lysine-rich protein 1
hg19_v2_chr14_-_89259080_89259096	0.252739	GCAGCAU	ENST00000554922.1|EML5|ENSG00000165521.11|echinoderm microtubule associated protein like 5 	ENST00000352093.5|EML5|ENSG00000165521.11|echinoderm microtubule associated protein like 5
hg19_v2_chr7_-_82073109_82073150	0.252625	GCAGCAU	ENST00000356860.3|CACNA2D1|ENSG00000153956.11|calcium channel, voltage-dependent, alpha 2/delta subunit 1
hg19_v2_chr3_+_179065474_179065530	0.249753	GCAGCAU	ENST00000471841.1|MFN1|ENSG00000171109.14|mitofusin 1 	ENST00000280653.7|MFN1|ENSG00000171109.14|mitofusin 1
hg19_v2_chr9_-_127952032_127952098	0.244189	GCAGCAU	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chrX_-_34675391_34675411	0.241787	GCAGCAU	ENST00000275954.3|TMEM47|ENSG00000147027.3|transmembrane protein 47
hg19_v2_chr7_+_116502527_116502558	0.238665	GCAGCAU	ENST00000361183.3|CAPZA2|ENSG00000198898.8|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v2_chr5_-_137368708_137368721	0.238447	GCAGCAU	ENST00000033079.3|FAM13B|ENSG00000031003.6|family with sequence similarity 13, member B
hg19_v2_chr2_-_55844720_55844772	0.237218	GCAGCAU	ENST00000345102.5|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium) 	ENST00000272313.5|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium) 	ENST00000407823.3|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium)
hg19_v2_chr4_+_26585538_26585680	0.225722	GCAGCAU	ENST00000264866.4|TBC1D19|ENSG00000109680.6|TBC1 domain family, member 19
hg19_v2_chr8_+_59465728_59465826	0.224513	GCAGCAU	ENST00000260130.4|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000422546.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000447182.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000413219.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000424270.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000523483.1|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000520168.1|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin)
hg19_v2_chr21_+_35445827_35445886	0.223254	GCAGCAU	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chr5_+_67511524_67511628	0.221844	GCAGCAU	ENST00000521381.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 	ENST00000521657.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr2_-_71454185_71454242	0.218355	GCAGCAU	ENST00000244221.8|PAIP2B|ENSG00000124374.8|poly(A) binding protein interacting protein 2B
hg19_v2_chr5_+_153418466_153418565	0.217871	GCAGCAU	ENST00000522782.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000439768.2|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000436816.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000322602.5|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000522177.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000520899.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3
hg19_v2_chr11_+_118230287_118230361	0.211714	GCAGCAU	ENST00000252108.3|UBE4A|ENSG00000110344.5|ubiquitination factor E4A 	ENST00000431736.2|UBE4A|ENSG00000110344.5|ubiquitination factor E4A
hg19_v2_chr13_+_20532807_20532841	0.211334	GCAGCAU	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr10_+_54074033_54074056	0.210999	GCAGCAU	ENST00000373970.3|DKK1|ENSG00000107984.5|dickkopf WNT signaling pathway inhibitor 1
hg19_v2_chr3_-_123304017_123304040	0.210511	GCAGCAU	ENST00000383657.5|PTPLB|ENSG00000206527.5|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b
hg19_v2_chr1_+_93913713_93913839	0.206337	GCAGCAU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr21_-_16437255_16437340	0.206004	GCAGCAU	ENST00000400199.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1 	ENST00000400202.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1
hg19_v2_chrX_-_20284958_20285039	0.205025	GCAGCAU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr10_+_98592009_98592061	0.204816	GCAGCAU	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr5_-_98262240_98262240	0.203448	GCAGCAU	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr12_-_39837192_39837206	0.202928	GCAGCAU	ENST00000361961.3|KIF21A|ENSG00000139116.13|kinesin family member 21A 	ENST00000395670.3|KIF21A|ENSG00000139116.13|kinesin family member 21A
hg19_v2_chr2_-_46385_46447	0.200587	GCAGCAU	ENST00000327669.4|FAM110C|ENSG00000184731.5|family with sequence similarity 110, member C
hg19_v2_chr8_+_96145974_96146041	0.194623	GCAGCAU	ENST00000315367.3|PLEKHF2|ENSG00000175895.3|pleckstrin homology domain containing, family F (with FYVE domain) member 2
hg19_v2_chr12_-_102513843_102513908	0.192991	GCAGCAU	ENST00000551744.2|NUP37|ENSG00000075188.4|nucleoporin 37kDa 	ENST00000552283.1|NUP37|ENSG00000075188.4|nucleoporin 37kDa
hg19_v2_chr1_-_171711387_171711420	0.191662	GCAGCAU	ENST00000236192.7|VAMP4|ENSG00000117533.10|vesicle-associated membrane protein 4
hg19_v2_chr4_+_6784401_6784510	0.191185	GCAGCAU	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr8_-_12612962_12613049	0.188418	GCAGCAU	ENST00000398246.3|LONRF1|ENSG00000154359.8|LON peptidase N-terminal domain and ring finger 1
hg19_v2_chr1_+_78245303_78245351	0.18808	GCAGCAU	ENST00000370791.3|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A 	ENST00000443751.2|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A
hg19_v2_chr3_+_152017181_152017229	0.187349	GCAGCAU	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr2_-_172017343_172017391	0.187058	GCAGCAU	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr2_+_120517174_120517207	0.185494	GCAGCAU	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr3_+_137906109_137906153	0.181619	GCAGCAU	ENST00000481646.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000469044.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000491704.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000461600.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8
hg19_v2_chr1_-_205601064_205601090	0.179957	GCAGCAU	ENST00000357992.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1) 	ENST00000289703.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1)
hg19_v2_chr1_-_150849208_150849244	0.179128	GCAGCAU	ENST00000358595.5|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr13_+_93879085_93879136	0.176956	GCAGCAU	ENST00000377047.4|GPC6|ENSG00000183098.6|glypican 6
hg19_v2_chr8_-_57123815_57123867	0.176629	GCAGCAU	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr14_+_57046500_57046529	0.176619	GCAGCAU	ENST00000261556.6|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr18_+_2655692_2655737	0.173214	GCAGCAU	ENST00000320876.6|SMCHD1|ENSG00000101596.10|structural maintenance of chromosomes flexible hinge domain containing 1
hg19_v2_chr4_-_111119804_111119832	0.173083	GCAGCAU	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr3_+_119187785_119187863	0.172767	GCAGCAU	ENST00000295588.4|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1 	ENST00000476573.1|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1
hg19_v2_chr1_+_113615794_113615884	0.171667	GCAGCAU	ENST00000361127.5|LRIG2|ENSG00000198799.7|leucine-rich repeats and immunoglobulin-like domains 2
hg19_v2_chr10_-_75910789_75910821	0.171108	GCAGCAU	ENST00000355264.4|AP3M1|ENSG00000185009.8|adaptor-related protein complex 3, mu 1 subunit
hg19_v2_chr8_-_74791051_74791145	0.167769	GCAGCAU	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr2_-_68479614_68479685	0.167497	GCAGCAU	ENST00000234310.3|PPP3R1|ENSG00000221823.6|protein phosphatase 3, regulatory subunit B, alpha
hg19_v2_chr16_+_9185450_9185516	0.167363	GCAGCAU	ENST00000327827.7|C16orf72|ENSG00000182831.7|chromosome 16 open reading frame 72
hg19_v2_chr1_+_100435315_100435345	0.167112	GCAGCAU	ENST00000370155.3|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 	ENST00000465289.1|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
hg19_v2_chr9_+_33817461_33817565	0.164891	GCAGCAU	ENST00000263228.3|UBE2R2|ENSG00000107341.4|ubiquitin-conjugating enzyme E2R 2
hg19_v2_chr16_+_69599861_69599887	0.163487	GCAGCAU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chrX_+_70752917_70752933	0.16178	GCAGCAU	ENST00000373719.3|OGT|ENSG00000147162.9|O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr12_-_42632016_42632089	0.15732	GCAGCAU	ENST00000442791.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000327791.4|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000534854.2|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380788.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380790.4|YAF2|ENSG00000015153.10|YY1 associated factor 2
hg19_v2_chr2_-_75788038_75788089	0.155868	GCAGCAU	ENST00000393913.3|EVA1A|ENSG00000115363.9|eva-1 homolog A (C. elegans) 	ENST00000410113.1|EVA1A|ENSG00000115363.9|eva-1 homolog A (C. elegans)
hg19_v2_chr3_-_24536253_24536328	0.155481	GCAGCAU	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr4_-_129208940_129208976	0.155311	GCAGCAU	ENST00000296425.5|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chr7_-_66460563_66460605	0.155234	GCAGCAU	ENST00000246868.2|SBDS|ENSG00000126524.5|Shwachman-Bodian-Diamond syndrome
hg19_v2_chr14_-_53417732_53417815	0.153018	GCAGCAU	ENST00000399304.3|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000395631.2|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000341590.3|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000343279.4|FERMT2|ENSG00000073712.9|fermitin family member 2
hg19_v2_chr6_-_117923520_117923529	0.152655	GCAGCAU	ENST00000368498.2|GOPC|ENSG00000047932.9|golgi-associated PDZ and coiled-coil motif containing
hg19_v2_chrX_-_131352152_131352204	0.152468	GCAGCAU	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr6_-_90062543_90062567	0.149671	GCAGCAU	ENST00000435041.2|UBE2J1|ENSG00000198833.6|ubiquitin-conjugating enzyme E2, J1
hg19_v2_chr1_-_85666688_85666729	0.147442	GCAGCAU	ENST00000341460.5|SYDE2|ENSG00000097096.8|synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
hg19_v2_chr1_+_162467595_162467655	0.14684	GCAGCAU	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr3_-_72496035_72496069	0.146365	GCAGCAU	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr7_+_32535060_32535322	0.145619	GCAGCAU	ENST00000318709.4|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase) 	ENST00000409301.1|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase) 	ENST00000404479.1|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase)
hg19_v2_chr11_+_56949221_56949221	0.144792	GCAGCAU	ENST00000497933.1|LRRC55|ENSG00000183908.5|leucine rich repeat containing 55
hg19_v2_chr3_-_49907323_49907374	0.143974	GCAGCAU	ENST00000296471.7|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated 	ENST00000488336.1|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated 	ENST00000467248.1|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated 	ENST00000466940.1|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated 	ENST00000463537.1|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated 	ENST00000480398.2|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated
hg19_v2_chr13_-_50367057_50367142	0.140746	GCAGCAU	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr12_-_6809958_6809996	0.139091	GCAGCAU	ENST00000320591.5|PIANP|ENSG00000139200.9|PILR alpha associated neural protein 	ENST00000534837.1|PIANP|ENSG00000139200.9|PILR alpha associated neural protein
hg19_v2_chr12_+_68042495_68042508	0.137935	GCAGCAU	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr18_+_19321281_19321334	0.136368	GCAGCAU	ENST00000261537.6|MIB1|ENSG00000101752.7|mindbomb E3 ubiquitin protein ligase 1
hg19_v2_chr5_+_82767284_82767310	0.134648	GCAGCAU	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr14_-_53258314_53258418	0.133452	GCAGCAU	ENST00000216410.3|GNPNAT1|ENSG00000100522.4|glucosamine-phosphate N-acetyltransferase 1 	ENST00000557604.1|GNPNAT1|ENSG00000100522.4|glucosamine-phosphate N-acetyltransferase 1
hg19_v2_chr22_-_42828375_42828431	0.132731	GCAGCAU	ENST00000329021.5|NFAM1|ENSG00000235568.2|NFAT activating protein with ITAM motif 1
hg19_v2_chr2_+_170440844_170440897	0.132417	GCAGCAU	ENST00000260970.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000433207.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000409714.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000462903.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G)
hg19_v2_chr2_-_201936302_201936416	0.131671	GCAGCAU	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr6_+_127439749_127439829	0.131594	GCAGCAU	ENST00000356698.4|RSPO3|ENSG00000146374.9|R-spondin 3
hg19_v2_chr20_+_8112824_8112925	0.131073	GCAGCAU	ENST00000378641.3|PLCB1|ENSG00000182621.12|phospholipase C, beta 1 (phosphoinositide-specific)
hg19_v2_chr9_+_92219919_92219953	0.129288	GCAGCAU	ENST00000252506.6|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma 	ENST00000375769.1|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma
hg19_v2_chr1_-_146644122_146644176	0.125819	GCAGCAU	ENST00000254101.3|PRKAB2|ENSG00000131791.6|protein kinase, AMP-activated, beta 2 non-catalytic subunit
hg19_v2_chr17_-_7120525_7120666	0.123113	GCAGCAU	ENST00000447163.1|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila) 	ENST00000399506.2|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila) 	ENST00000302955.6|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila)
hg19_v2_chr2_+_208576355_208576475	0.122567	GCAGCAU	ENST00000420822.1|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000295414.3|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000339882.5|CCNYL1|ENSG00000163249.5|cyclin Y-like 1
hg19_v2_chr3_-_122233723_122233797	0.121359	GCAGCAU	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr5_-_137878887_137878989	0.121009	GCAGCAU	ENST00000507939.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000572514.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000499810.2|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000360541.5|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1
hg19_v2_chrX_-_122866874_122866911	0.119034	GCAGCAU	ENST00000245838.8|THOC2|ENSG00000125676.15|THO complex 2 	ENST00000355725.4|THOC2|ENSG00000125676.15|THO complex 2
hg19_v2_chr3_+_57261743_57261824	0.118442	GCAGCAU	ENST00000288266.3|APPL1|ENSG00000157500.6|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
hg19_v2_chr12_+_53399942_53400071	0.11711	GCAGCAU	ENST00000262056.9|EIF4B|ENSG00000063046.13|eukaryotic translation initiation factor 4B
hg19_v2_chr4_+_57774042_57774114	0.115911	GCAGCAU	ENST00000309042.7|REST|ENSG00000084093.11|RE1-silencing transcription factor
hg19_v2_chr13_+_96329381_96329416	0.114897	GCAGCAU	ENST00000602402.1|DNAJC3|ENSG00000102580.10|DnaJ (Hsp40) homolog, subfamily C, member 3 	ENST00000376795.6|DNAJC3|ENSG00000102580.10|DnaJ (Hsp40) homolog, subfamily C, member 3
hg19_v2_chr1_+_109792641_109792641	0.114845	GCAGCAU	ENST00000271332.3|CELSR2|ENSG00000143126.7|cadherin, EGF LAG seven-pass G-type receptor 2
hg19_v2_chr12_+_104458235_104458344	0.11438	GCAGCAU	ENST00000229330.4|HCFC2|ENSG00000111727.7|host cell factor C2
hg19_v2_chr1_-_84464780_84464862	0.113803	GCAGCAU	ENST00000260505.8|TTLL7|ENSG00000137941.12|tubulin tyrosine ligase-like family, member 7
hg19_v2_chr4_+_124320665_124320702	0.111493	GCAGCAU	ENST00000394339.2|SPRY1|ENSG00000164056.6|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg19_v2_chr2_-_16847084_16847110	0.111284	GCAGCAU	ENST00000406434.1|FAM49A|ENSG00000197872.7|family with sequence similarity 49, member A 	ENST00000381323.3|FAM49A|ENSG00000197872.7|family with sequence similarity 49, member A
hg19_v2_chr2_-_24149977_24150007	0.109444	GCAGCAU	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr1_+_90286562_90286617	0.108125	GCAGCAU	ENST00000525774.1|LRRC8D|ENSG00000171492.10|leucine rich repeat containing 8 family, member D 	ENST00000337338.5|LRRC8D|ENSG00000171492.10|leucine rich repeat containing 8 family, member D
hg19_v2_chr22_+_29279552_29279586	0.107334	GCAGCAU	ENST00000544604.2|ZNRF3|ENSG00000183579.11|zinc and ring finger 3
hg19_v2_chr2_+_26256938_26257031	0.10608	GCAGCAU	ENST00000264710.4|RAB10|ENSG00000084733.6|RAB10, member RAS oncogene family
hg19_v2_chr10_-_15210666_15210707	0.105554	GCAGCAU	ENST00000378165.4|NMT2|ENSG00000152465.13|N-myristoyltransferase 2
hg19_v2_chr15_+_49715293_49715448	0.104612	GCAGCAU	ENST00000267843.4|FGF7|ENSG00000140285.5|fibroblast growth factor 7 	ENST00000560270.1|FGF7|ENSG00000140285.5|fibroblast growth factor 7
hg19_v2_chr1_+_110091189_110091268	0.103639	GCAGCAU	ENST00000369851.4|GNAI3|ENSG00000065135.7|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
hg19_v2_chr14_+_102228123_102228237	0.103419	GCAGCAU	ENST00000422945.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000554442.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556260.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000328724.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557268.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr9_+_4679555_4679617	0.103156	GCAGCAU	ENST00000381858.1|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1 	ENST00000381854.3|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1
hg19_v2_chr3_-_176914238_176914277	0.102793	GCAGCAU	ENST00000430069.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1 	ENST00000428970.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1
hg19_v2_chr2_+_231577532_231577639	0.101104	GCAGCAU	ENST00000258418.5|CAB39|ENSG00000135932.6|calcium binding protein 39
hg19_v2_chr6_+_134274322_134274342	0.0988265	GCAGCAU	ENST00000367871.1|TBPL1|ENSG00000028839.5|TBP-like 1 	ENST00000237264.4|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr7_+_91875508_91875559	0.0979185	GCAGCAU	ENST00000265742.3|ANKIB1|ENSG00000001629.5|ankyrin repeat and IBR domain containing 1
hg19_v2_chr12_-_80084862_80084884	0.0978526	GCAGCAU	ENST00000328827.4|PAWR|ENSG00000177425.6|PRKC, apoptosis, WT1, regulator
hg19_v2_chr12_-_8088871_8088932	0.0975017	GCAGCAU	ENST00000075120.7|SLC2A3|ENSG00000059804.11|solute carrier family 2 (facilitated glucose transporter), member 3
hg19_v2_chr4_+_123747834_123747863	0.0973656	GCAGCAU	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr5_-_148930960_148931013	0.0929247	GCAGCAU	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr14_+_92588281_92588336	0.0927741	GCAGCAU	ENST00000298875.4|CPSF2|ENSG00000165934.8|cleavage and polyadenylation specific factor 2, 100kDa 	ENST00000553427.1|CPSF2|ENSG00000165934.8|cleavage and polyadenylation specific factor 2, 100kDa
hg19_v2_chr17_+_29421900_29421951	0.0927223	GCAGCAU	ENST00000358273.4|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000356175.3|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr9_-_72287191_72287222	0.0920514	GCAGCAU	ENST00000265381.4|APBA1|ENSG00000107282.5|amyloid beta (A4) precursor protein-binding, family A, member 1
hg19_v2_chr1_+_109234907_109234996	0.0916005	GCAGCAU	ENST00000370025.4|PRPF38B|ENSG00000134186.7|pre-mRNA processing factor 38B 	ENST00000370022.5|PRPF38B|ENSG00000134186.7|pre-mRNA processing factor 38B 	ENST00000370021.1|PRPF38B|ENSG00000134186.7|pre-mRNA processing factor 38B
hg19_v2_chr17_+_4487294_4487307	0.0904252	GCAGCAU	ENST00000338859.4|SMTNL2|ENSG00000188176.7|smoothelin-like 2
hg19_v2_chr10_-_119134918_119134986	0.090027	GCAGCAU	ENST00000334464.5|PDZD8|ENSG00000165650.7|PDZ domain containing 8
hg19_v2_chrX_+_30671476_30671655	0.0893326	GCAGCAU	ENST00000378946.3|GK|ENSG00000198814.8|glycerol kinase 	ENST00000378943.3|GK|ENSG00000198814.8|glycerol kinase 	ENST00000378945.3|GK|ENSG00000198814.8|glycerol kinase 	ENST00000427190.1|GK|ENSG00000198814.8|glycerol kinase 	ENST00000378941.3|GK|ENSG00000198814.8|glycerol kinase
hg19_v2_chr8_-_81083731_81083813	0.0878033	GCAGCAU	ENST00000379096.5|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr11_-_102962929_102962944	0.087653	GCAGCAU	ENST00000260247.5|DCUN1D5|ENSG00000137692.7|DCN1, defective in cullin neddylation 1, domain containing 5
hg19_v2_chr5_+_34656331_34656351	0.0871841	GCAGCAU	ENST00000265109.3|RAI14|ENSG00000039560.9|retinoic acid induced 14
hg19_v2_chr7_-_139876812_139876860	0.0824483	GCAGCAU	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr4_-_99579733_99579789	0.082422	GCAGCAU	ENST00000305798.3|TSPAN5|ENSG00000168785.3|tetraspanin 5
hg19_v2_chr1_-_173991434_173991556	0.082233	GCAGCAU	ENST00000367696.2|RC3H1|ENSG00000135870.7|ring finger and CCCH-type domains 1
hg19_v2_chr5_-_132948216_132948255	0.0821085	GCAGCAU	ENST00000265342.7|FSTL4|ENSG00000053108.12|follistatin-like 4
hg19_v2_chr9_+_17579084_17579128	0.0820932	GCAGCAU	ENST00000380607.4|SH3GL2|ENSG00000107295.8|SH3-domain GRB2-like 2
hg19_v2_chr3_-_12200851_12200885	0.0815909	GCAGCAU	ENST00000287814.4|TIMP4|ENSG00000157150.4|TIMP metallopeptidase inhibitor 4
hg19_v2_chr2_+_170683942_170683972	0.0815339	GCAGCAU	ENST00000272793.5|UBR3|ENSG00000144357.12|ubiquitin protein ligase E3 component n-recognin 3 (putative)
hg19_v2_chr3_+_43328004_43328095	0.0806042	GCAGCAU	ENST00000454177.1|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000429705.2|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000296088.7|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000437827.1|SNRK|ENSG00000163788.9|SNF related kinase
hg19_v2_chr1_-_41131326_41131400	0.0784199	GCAGCAU	ENST00000372684.3|RIMS3|ENSG00000117016.5|regulating synaptic membrane exocytosis 3
hg19_v2_chr5_+_172483347_172483407	0.0778644	GCAGCAU	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr3_-_98620500_98620547	0.0767709	GCAGCAU	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr5_+_5422778_5422841	0.0767524	GCAGCAU	ENST00000296564.7|KIAA0947|ENSG00000164151.7|KIAA0947
hg19_v2_chr9_+_112810878_112810985	0.0754798	GCAGCAU	ENST00000434623.2|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2 	ENST00000374525.1|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2
hg19_v2_chr5_-_100238956_100238994	0.0746806	GCAGCAU	ENST00000231461.5|ST8SIA4|ENSG00000113532.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v2_chr10_+_72164135_72164135	0.0739216	GCAGCAU	ENST00000373218.4|EIF4EBP2|ENSG00000148730.6|eukaryotic translation initiation factor 4E binding protein 2
hg19_v2_chr3_-_113415441_113415500	0.0734867	GCAGCAU	ENST00000491165.1|KIAA2018|ENSG00000176542.5|KIAA2018 	ENST00000316407.4|KIAA2018|ENSG00000176542.5|KIAA2018
hg19_v2_chrX_-_19988382_19988416	0.0730565	GCAGCAU	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr1_+_33005020_33005077	0.0722382	GCAGCAU	ENST00000373510.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A 	ENST00000316459.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A
hg19_v2_chr9_+_15553055_15553101	0.0720356	GCAGCAU	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr5_-_162887071_162887166	0.0715958	GCAGCAU	ENST00000302764.4|NUDCD2|ENSG00000170584.6|NudC domain containing 2
hg19_v2_chr14_-_91526922_91527001	0.0706056	GCAGCAU	ENST00000418736.2|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5 	ENST00000261991.3|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5
hg19_v2_chr3_-_58419537_58419584	0.0702419	GCAGCAU	ENST00000474765.1|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000485460.1|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000302746.6|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000383714.4|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta
hg19_v2_chr2_+_45878790_45878913	0.0697757	GCAGCAU	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr4_+_48343339_48343414	0.0681643	GCAGCAU	ENST00000264313.6|SLAIN2|ENSG00000109171.10|SLAIN motif family, member 2
hg19_v2_chr18_+_60190226_60190314	0.0679248	GCAGCAU	ENST00000269499.5|ZCCHC2|ENSG00000141664.5|zinc finger, CCHC domain containing 2
hg19_v2_chr8_+_38614807_38614851	0.0676235	GCAGCAU	ENST00000330691.6|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000348567.4|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr5_+_122181184_122181213	0.0673458	GCAGCAU	ENST00000513881.1|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chrX_+_102192200_102192200	0.0672781	GCAGCAU	ENST00000218249.5|RAB40AL|ENSG00000102128.6|RAB40A, member RAS oncogene family-like
hg19_v2_chr17_+_67410832_67410871	0.0658876	GCAGCAU	ENST00000590474.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr2_-_47168906_47168994	0.0650152	GCAGCAU	ENST00000444761.2|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409147.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr10_-_61666267_61666414	0.0648233	GCAGCAU	ENST00000263102.6|CCDC6|ENSG00000108091.10|coiled-coil domain containing 6
hg19_v2_chr1_-_92351769_92351787	0.0636722	GCAGCAU	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr15_+_69706585_69706641	0.0623312	GCAGCAU	ENST00000559279.1|KIF23|ENSG00000137807.9|kinesin family member 23 	ENST00000395392.2|KIF23|ENSG00000137807.9|kinesin family member 23
hg19_v2_chr17_+_45727204_45727220	0.0614401	GCAGCAU	ENST00000290158.4|KPNB1|ENSG00000108424.5|karyopherin (importin) beta 1
hg19_v2_chr5_+_76506706_76506787	0.0613653	GCAGCAU	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chr1_-_48462566_48462595	0.0602156	GCAGCAU	ENST00000606738.2|TRABD2B|ENSG00000269113.3|TraB domain containing 2B
hg19_v2_chr10_+_103113802_103113820	0.0592831	GCAGCAU	ENST00000370187.3|BTRC|ENSG00000166167.13|beta-transducin repeat containing E3 ubiquitin protein ligase
hg19_v2_chr6_-_170599561_170599561	0.0584712	GCAGCAU	ENST00000366756.3|DLL1|ENSG00000198719.7|delta-like 1 (Drosophila)
hg19_v2_chr10_+_92980517_92980550	0.0576572	GCAGCAU	ENST00000336126.5|PCGF5|ENSG00000180628.10|polycomb group ring finger 5
hg19_v2_chr1_-_220101944_220102000	0.0569324	GCAGCAU	ENST00000366926.3|SLC30A10|ENSG00000196660.6|solute carrier family 30, member 10 	ENST00000536992.1|SLC30A10|ENSG00000196660.6|solute carrier family 30, member 10
hg19_v2_chr1_-_111150048_111150060	0.0568693	GCAGCAU	ENST00000485317.1|KCNA2|ENSG00000177301.9|potassium voltage-gated channel, shaker-related subfamily, member 2
hg19_v2_chr9_-_95055956_95056004	0.0564962	GCAGCAU	ENST00000375629.3|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase 	ENST00000447699.2|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase 	ENST00000375643.3|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase 	ENST00000395554.3|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase
hg19_v2_chrX_+_21958674_21958721	0.0562003	GCAGCAU	ENST00000404933.2|SMS|ENSG00000102172.11|spermine synthase
hg19_v2_chr1_+_233463507_233463520	0.0554822	GCAGCAU	ENST00000366623.3|MLK4|ENSG00000143674.6|Mitogen-activated protein kinase kinase kinase MLK4  	ENST00000366624.3|MLK4|ENSG00000143674.6|Mitogen-activated protein kinase kinase kinase MLK4
hg19_v2_chr17_+_56833184_56833249	0.0553476	GCAGCAU	ENST00000308249.2|PPM1E|ENSG00000175175.4|protein phosphatase, Mg2+/Mn2+ dependent, 1E
hg19_v2_chr10_+_60936347_60936358	0.0548478	GCAGCAU	ENST00000373880.4|PHYHIPL|ENSG00000165443.7|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg19_v2_chrX_+_134478706_134478736	0.0542528	GCAGCAU	ENST00000370761.3|ZNF449|ENSG00000173275.8|zinc finger protein 449 	ENST00000339249.4|ZNF449|ENSG00000173275.8|zinc finger protein 449 	ENST00000370760.3|ZNF449|ENSG00000173275.8|zinc finger protein 449
hg19_v2_chr9_+_112542572_112542590	0.0539438	GCAGCAU	ENST00000374530.3|PALM2-AKAP2|ENSG00000157654.13|PALM2-AKAP2 readthrough
hg19_v2_chr7_+_128379346_128379447	0.0529853	GCAGCAU	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr11_+_117014983_117015017	0.0508933	GCAGCAU	ENST00000527958.1|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000419197.2|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000304808.6|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000529887.2|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)
hg19_v2_chr12_+_22778009_22778112	0.0504494	GCAGCAU	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr1_+_206680879_206680896	0.0503956	GCAGCAU	ENST00000355294.4|RASSF5|ENSG00000136653.15|Ras association (RalGDS/AF-6) domain family member 5 	ENST00000367117.3|RASSF5|ENSG00000136653.15|Ras association (RalGDS/AF-6) domain family member 5
hg19_v2_chr1_-_157108130_157108173	0.0499514	GCAGCAU	ENST00000368192.4|ETV3|ENSG00000117036.7|ets variant 3
hg19_v2_chr8_-_67525473_67525518	0.0497365	GCAGCAU	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr10_+_89622870_89622870	0.047941	GCAGCAU	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr1_+_228194693_228194783	0.0473947	GCAGCAU	ENST00000284523.1|WNT3A|ENSG00000154342.4|wingless-type MMTV integration site family, member 3A 	ENST00000366753.2|WNT3A|ENSG00000154342.4|wingless-type MMTV integration site family, member 3A
hg19_v2_chr2_+_16080659_16080686	0.0472103	GCAGCAU	ENST00000281043.3|MYCN|ENSG00000134323.10|v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
hg19_v2_chr12_+_20522179_20522203	0.0466699	GCAGCAU	ENST00000359062.3|PDE3A|ENSG00000172572.6|phosphodiesterase 3A, cGMP-inhibited
hg19_v2_chr3_+_133293278_133293492	0.0455212	GCAGCAU	ENST00000508481.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000420115.2|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000504867.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000507408.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000511392.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000515421.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse)
hg19_v2_chr5_-_83680603_83680617	0.0448463	GCAGCAU	ENST00000296591.5|EDIL3|ENSG00000164176.8|EGF-like repeats and discoidin I-like domains 3
hg19_v2_chr1_-_39325431_39325495	0.0431897	GCAGCAU	ENST00000373001.3|RRAGC|ENSG00000116954.7|Ras-related GTP binding C
hg19_v2_chr4_+_148538517_148538592	0.0428267	GCAGCAU	ENST00000296582.3|TMEM184C|ENSG00000164168.3|transmembrane protein 184C 	ENST00000508208.1|TMEM184C|ENSG00000164168.3|transmembrane protein 184C
hg19_v2_chr2_+_203499901_203499911	0.041963	GCAGCAU	ENST00000303116.6|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B 	ENST00000392238.2|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B
hg19_v2_chr19_-_46476791_46476819	0.0417147	GCAGCAU	ENST00000263257.5|NOVA2|ENSG00000104967.6|neuro-oncological ventral antigen 2
hg19_v2_chr6_-_99873145_99873207	0.0416627	GCAGCAU	ENST00000369239.5|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein 	ENST00000438806.1|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein
hg19_v2_chr6_-_100912785_100912822	0.0412072	GCAGCAU	ENST00000369208.3|SIM1|ENSG00000112246.5|single-minded family bHLH transcription factor 1
hg19_v2_chr20_+_35201857_35201891	0.0409586	GCAGCAU	ENST00000373874.2|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr11_-_86666427_86666450	0.0408872	GCAGCAU	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr20_+_19997948_19998034	0.0408591	GCAGCAU	ENST00000310450.4|NAA20|ENSG00000173418.7|N(alpha)-acetyltransferase 20, NatB catalytic subunit 	ENST00000398602.2|NAA20|ENSG00000173418.7|N(alpha)-acetyltransferase 20, NatB catalytic subunit
hg19_v2_chr14_+_55518349_55518423	0.0404555	GCAGCAU	ENST00000395468.4|MAPK1IP1L|ENSG00000168175.10|mitogen-activated protein kinase 1 interacting protein 1-like
hg19_v2_chr13_-_30424821_30424847	0.0400778	GCAGCAU	ENST00000380680.4|UBL3|ENSG00000122042.9|ubiquitin-like 3
hg19_v2_chr4_-_153457197_153457268	0.0397918	GCAGCAU	ENST00000281708.4|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chr6_+_138188551_138188719	0.0384993	GCAGCAU	ENST00000237289.4|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3 	ENST00000433680.1|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3
hg19_v2_chr2_-_33824336_33824378	0.0378696	GCAGCAU	ENST00000431950.1|FAM98A|ENSG00000119812.14|family with sequence similarity 98, member A 	ENST00000403368.1|FAM98A|ENSG00000119812.14|family with sequence similarity 98, member A 	ENST00000441530.2|FAM98A|ENSG00000119812.14|family with sequence similarity 98, member A
hg19_v2_chr1_+_11072696_11072735	0.0373943	GCAGCAU	ENST00000240185.3|TARDBP|ENSG00000120948.11|TAR DNA binding protein 	ENST00000476201.1|TARDBP|ENSG00000120948.11|TAR DNA binding protein
hg19_v2_chr13_+_27131887_27131899	0.0367135	GCAGCAU	ENST00000335327.5|WASF3|ENSG00000132970.8|WAS protein family, member 3
hg19_v2_chr1_-_20812690_20812763	0.0365239	GCAGCAU	ENST00000375078.3|CAMK2N1|ENSG00000162545.5|calcium/calmodulin-dependent protein kinase II inhibitor 1
hg19_v2_chr6_-_116381918_116381977	0.0362971	GCAGCAU	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr17_-_28618948_28619023	0.0356372	GCAGCAU	ENST00000261714.6|BLMH|ENSG00000108578.10|bleomycin hydrolase
hg19_v2_chr10_+_97803151_97803348	0.0355714	GCAGCAU	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr4_-_39979576_39979588	0.0353749	GCAGCAU	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chr2_-_160472952_160473080	0.0353668	GCAGCAU	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr10_+_90639491_90639491	0.0343762	GCAGCAU	ENST00000371926.3|STAMBPL1|ENSG00000138134.7|STAM binding protein-like 1 	ENST00000371927.3|STAMBPL1|ENSG00000138134.7|STAM binding protein-like 1
hg19_v2_chr10_+_52751010_52751118	0.0342861	GCAGCAU	ENST00000373985.1|PRKG1|ENSG00000185532.10|protein kinase, cGMP-dependent, type I
hg19_v2_chr8_+_21777159_21777221	0.0338238	GCAGCAU	ENST00000434536.1|XPO7|ENSG00000130227.12|exportin 7 	ENST00000252512.9|XPO7|ENSG00000130227.12|exportin 7
hg19_v2_chr19_-_43032532_43032661	0.0329846	GCAGCAU	ENST00000403461.1|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 	ENST00000352591.5|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 	ENST00000358394.3|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 	ENST00000403444.3|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 	ENST00000308072.4|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 	ENST00000599389.1|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 	ENST00000351134.3|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 	ENST00000161559.6|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
hg19_v2_chr3_-_136471204_136471249	0.0329815	GCAGCAU	ENST00000480733.1|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000383202.2|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000236698.5|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000434713.2|STAG1|ENSG00000118007.8|stromal antigen 1
hg19_v2_chr2_+_176981307_176981307	0.0324529	GCAGCAU	ENST00000249501.4|HOXD10|ENSG00000128710.5|homeobox D10
hg19_v2_chr8_+_120885949_120885976	0.0318536	GCAGCAU	ENST00000523492.1|DEPTOR|ENSG00000155792.5|DEP domain containing MTOR-interacting protein 	ENST00000286234.5|DEPTOR|ENSG00000155792.5|DEP domain containing MTOR-interacting protein
hg19_v2_chr2_-_37193606_37193633	0.0314613	GCAGCAU	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr15_+_72766651_72766680	0.0306873	GCAGCAU	ENST00000379887.4|ARIH1|ENSG00000166233.8|ariadne RBR E3 ubiquitin protein ligase 1
hg19_v2_chr16_-_66785699_66785759	0.0303291	GCAGCAU	ENST00000258198.2|DYNC1LI2|ENSG00000135720.8|dynein, cytoplasmic 1, light intermediate chain 2
hg19_v2_chr22_-_41252962_41253026	0.0286956	GCAGCAU	ENST00000216218.3|ST13|ENSG00000100380.8|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
hg19_v2_chr16_+_56225248_56225307	0.0270326	GCAGCAU	ENST00000262493.6|GNAO1|ENSG00000087258.9|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O
hg19_v2_chr19_-_47975417_47975441	0.0269467	GCAGCAU	ENST00000236877.6|SLC8A2|ENSG00000118160.9|solute carrier family 8 (sodium/calcium exchanger), member 2
hg19_v2_chr6_+_71276596_71276649	0.026704	GCAGCAU	ENST00000370474.3|C6orf57|ENSG00000154079.5|chromosome 6 open reading frame 57
hg19_v2_chr3_+_191046810_191046874	0.023821	GCAGCAU	ENST00000392455.3|CCDC50|ENSG00000152492.9|coiled-coil domain containing 50 	ENST00000392456.3|CCDC50|ENSG00000152492.9|coiled-coil domain containing 50
hg19_v2_chr7_-_44924939_44924993	0.0229816	GCAGCAU	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr17_-_71228357_71228533	0.0223744	GCAGCAU	ENST00000583024.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000403627.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000405159.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000581110.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chr4_+_106629929_106629982	0.0214393	GCAGCAU	ENST00000512828.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000394730.3|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000507281.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000515279.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing
hg19_v2_chr14_-_69619823_69619879	0.0204925	GCAGCAU	ENST00000341516.5|DCAF5|ENSG00000139990.13|DDB1 and CUL4 associated factor 5
hg19_v2_chr3_+_38495333_38495422	0.0200949	GCAGCAU	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr10_-_62149433_62149488	0.0199695	GCAGCAU	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr2_+_85804614_85804748	0.019857	GCAGCAU	ENST00000263864.5|VAMP8|ENSG00000118640.6|vesicle-associated membrane protein 8 	ENST00000409760.1|VAMP8|ENSG00000118640.6|vesicle-associated membrane protein 8
hg19_v2_chr12_+_8185288_8185339	0.0195856	GCAGCAU	ENST00000162391.3|FOXJ2|ENSG00000065970.4|forkhead box J2
hg19_v2_chr6_-_24721054_24721074	0.0189921	GCAGCAU	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr16_-_20911641_20911720	0.018492	GCAGCAU	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr17_-_55927370_55927442	0.0172392	GCAGCAU	ENST00000578444.1|MRPS23|ENSG00000181610.8|mitochondrial ribosomal protein S23 	ENST00000313608.8|MRPS23|ENSG00000181610.8|mitochondrial ribosomal protein S23 	ENST00000579380.1|MRPS23|ENSG00000181610.8|mitochondrial ribosomal protein S23
hg19_v2_chr1_-_38325256_38325292	0.017121	GCAGCAU	ENST00000373036.4|MTF1|ENSG00000188786.9|metal-regulatory transcription factor 1
hg19_v2_chr9_+_108006880_108006943	0.0163423	GCAGCAU	ENST00000374723.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374720.3|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374724.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1
hg19_v2_chr7_+_95401851_95401876	0.0159812	GCAGCAU	ENST00000447467.2|DYNC1I1|ENSG00000158560.10|dynein, cytoplasmic 1, intermediate chain 1
hg19_v2_chr12_+_57522258_57522313	0.0154771	GCAGCAU	ENST00000553277.1|LRP1|ENSG00000123384.9|low density lipoprotein receptor-related protein 1 	ENST00000243077.3|LRP1|ENSG00000123384.9|low density lipoprotein receptor-related protein 1
hg19_v2_chr3_-_160283348_160283376	0.0146892	GCAGCAU	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr15_-_41624685_41624819	0.0145764	GCAGCAU	ENST00000560640.1|OIP5|ENSG00000104147.4|Opa interacting protein 5 	ENST00000220514.3|OIP5|ENSG00000104147.4|Opa interacting protein 5
hg19_v2_chr15_-_72490114_72490145	0.0141289	GCAGCAU	ENST00000309731.7|GRAMD2|ENSG00000175318.7|GRAM domain containing 2
hg19_v2_chr1_-_24306798_24306828	0.0129305	GCAGCAU	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr2_+_149632783_149632820	0.0116479	GCAGCAU	ENST00000435030.1|KIF5C|ENSG00000168280.12|kinesin family member 5C
hg19_v2_chr9_+_82186872_82186898	0.0113492	GCAGCAU	ENST00000376544.3|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376520.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr20_-_40247133_40247194	0.0112566	GCAGCAU	ENST00000373233.3|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6 	ENST00000309279.7|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6
hg19_v2_chr1_-_154531095_154531119	0.0103919	GCAGCAU	ENST00000292211.4|UBE2Q1|ENSG00000160714.5|ubiquitin-conjugating enzyme E2Q family member 1
hg19_v2_chr1_+_26737253_26737269	0.0103706	GCAGCAU	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr22_-_17602200_17602265	0.0102441	GCAGCAU	ENST00000399875.1|CECR6|ENSG00000183307.3|cat eye syndrome chromosome region, candidate 6
hg19_v2_chr17_+_56160768_56160786	0.00925294	GCAGCAU	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chrX_-_118827333_118827365	0.00884413	GCAGCAU	ENST00000360156.7|SEPT6|ENSG00000125354.18|septin 6 	ENST00000354228.4|SEPT6|ENSG00000125354.18|septin 6 	ENST00000489216.1|SEPT6|ENSG00000125354.18|septin 6 	ENST00000354416.3|SEPT6|ENSG00000125354.18|septin 6 	ENST00000394610.1|SEPT6|ENSG00000125354.18|septin 6 	ENST00000343984.5|SEPT6|ENSG00000125354.18|septin 6
hg19_v2_chrX_+_110339439_110339605	0.00865083	GCAGCAU	ENST00000372010.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000519681.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000372007.5|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v2_chr2_+_181845298_181845378	0.00847124	GCAGCAU	ENST00000410062.4|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3
hg19_v2_chr12_-_8025442_8025459	0.00784283	GCAGCAU	ENST00000340749.5|SLC2A14|ENSG00000173262.7|solute carrier family 2 (facilitated glucose transporter), member 14 	ENST00000535295.1|SLC2A14|ENSG00000173262.7|solute carrier family 2 (facilitated glucose transporter), member 14 	ENST00000539234.1|SLC2A14|ENSG00000173262.7|solute carrier family 2 (facilitated glucose transporter), member 14
hg19_v2_chr9_-_116163400_116163613	0.00685397	GCAGCAU	ENST00000277315.5|ALAD|ENSG00000148218.11|aminolevulinate dehydratase 	ENST00000448137.1|ALAD|ENSG00000148218.11|aminolevulinate dehydratase 	ENST00000409155.3|ALAD|ENSG00000148218.11|aminolevulinate dehydratase
hg19_v2_chr12_+_52203789_52203789	0.00649255	GCAGCAU	ENST00000599343.1|AC068987.1|ENSG00000260415.3|HCG1997999; cDNA FLJ33996 fis, clone DFNES2008881
hg19_v2_chr14_+_39644387_39644417	0.00622939	GCAGCAU	ENST00000553331.1|PNN|ENSG00000100941.4|pinin, desmosome associated protein 	ENST00000216832.4|PNN|ENSG00000100941.4|pinin, desmosome associated protein
hg19_v2_chr6_+_34433844_34433921	0.0055532	GCAGCAU	ENST00000244458.2|PACSIN1|ENSG00000124507.6|protein kinase C and casein kinase substrate in neurons 1 	ENST00000374043.2|PACSIN1|ENSG00000124507.6|protein kinase C and casein kinase substrate in neurons 1
hg19_v2_chr4_+_108745711_108745726	0.00554437	GCAGCAU	ENST00000394684.4|SGMS2|ENSG00000164023.10|sphingomyelin synthase 2
hg19_v2_chr2_-_208030647_208030689	0.00536025	GCAGCAU	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr22_+_45559722_45559881	0.00524523	GCAGCAU	ENST00000347635.4|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000407019.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000424634.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000417702.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000425733.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000430547.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa
hg19_v2_chr3_-_171178157_171178225	0.00423051	GCAGCAU	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr3_-_164913777_164913790	0.00354541	GCAGCAU	ENST00000475390.1|SLITRK3|ENSG00000121871.3|SLIT and NTRK-like family, member 3
hg19_v2_chr1_-_155532484_155532605	0.00326806	GCAGCAU	ENST00000368346.3|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila) 	ENST00000548830.1|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila)
hg19_v2_chr22_+_39745930_39746012	0.00241719	GCAGCAU	ENST00000318801.4|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000216155.7|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000406293.3|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000328933.5|SYNGR1|ENSG00000100321.10|synaptogyrin 1
hg19_v2_chr17_-_38804061_38804112	0.00210884	GCAGCAU	ENST00000474246.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000377808.4|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000578044.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000580419.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000400122.3|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000580654.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000577721.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000478349.2|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000431889.2|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
hg19_v2_chr6_+_69345166_69345259	0.00034442	GCAGCAU	ENST00000370598.1|BAI3|ENSG00000135298.9|brain-specific angiogenesis inhibitor 3
