hg19_v2_chr10_-_105615164_105615323	0.0999262	GAGAUGA	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr17_+_55333876_55333939	0.0777489	GAGAUGA	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr15_-_26108355_26108417	0.0687368	GAGAUGA	ENST00000356865.6|ATP10A|ENSG00000206190.7|ATPase, class V, type 10A
hg19_v2_chr5_-_100238956_100238994	0.0510235	GAGAUGA	ENST00000231461.5|ST8SIA4|ENSG00000113532.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v2_chr20_+_56964169_56964182	0.0455475	GAGAUGA	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr19_+_18942720_18942748	0.0425572	GAGAUGA	ENST00000262803.5|UPF1|ENSG00000005007.8|UPF1 regulator of nonsense transcripts homolog (yeast)
hg19_v2_chr12_+_11802753_11802834	0.0419385	GAGAUGA	ENST00000396373.4|ETV6|ENSG00000139083.6|ets variant 6
hg19_v2_chr14_+_37667118_37667192	0.0414365	GAGAUGA	ENST00000556615.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000327441.7|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000536774.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1
hg19_v2_chr4_+_87856129_87856186	0.0396492	GAGAUGA	ENST00000395146.4|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1 	ENST00000507468.1|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1
hg19_v2_chr8_-_63998590_63998634	0.0354585	GAGAUGA	ENST00000260116.4|TTPA|ENSG00000137561.4|tocopherol (alpha) transfer protein
hg19_v2_chr17_-_48278983_48278999	0.0339478	GAGAUGA	ENST00000225964.5|COL1A1|ENSG00000108821.9|collagen, type I, alpha 1
hg19_v2_chr1_-_179198702_179198741	0.0335652	GAGAUGA	ENST00000502732.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chr4_+_184826418_184826522	0.0315862	GAGAUGA	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr14_-_96830207_96830207	0.0283588	GAGAUGA	ENST00000359933.4|ATG2B|ENSG00000066739.7|autophagy related 2B
hg19_v2_chr9_+_130830451_130830572	0.0268693	GAGAUGA	ENST00000373068.2|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 	ENST00000373069.5|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg19_v2_chr1_+_110577229_110577258	0.0267211	GAGAUGA	ENST00000369795.3|STRIP1|ENSG00000143093.10|striatin interacting protein 1 	ENST00000369794.2|STRIP1|ENSG00000143093.10|striatin interacting protein 1
hg19_v2_chr15_-_68724490_68724516	0.0264122	GAGAUGA	ENST00000315757.7|ITGA11|ENSG00000137809.12|integrin, alpha 11 	ENST00000423218.2|ITGA11|ENSG00000137809.12|integrin, alpha 11
hg19_v2_chr3_-_52188397_52188450	0.0253939	GAGAUGA	ENST00000474012.1|POC1A|ENSG00000164087.3|POC1 centriolar protein A 	ENST00000296484.2|POC1A|ENSG00000164087.3|POC1 centriolar protein A
hg19_v2_chr15_+_85923856_85923987	0.0252884	GAGAUGA	ENST00000560302.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000394518.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000361243.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000560256.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr9_+_116638562_116638606	0.0247338	GAGAUGA	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr14_+_77228532_77228672	0.0246626	GAGAUGA	ENST00000167106.4|VASH1|ENSG00000071246.6|vasohibin 1 	ENST00000554237.1|VASH1|ENSG00000071246.6|vasohibin 1
hg19_v2_chr19_-_19739007_19739051	0.0239933	GAGAUGA	ENST00000586703.1|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2 	ENST00000591042.1|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2 	ENST00000407877.3|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2
hg19_v2_chr5_+_139944024_139944054	0.0237781	GAGAUGA	ENST00000323146.3|SLC35A4|ENSG00000176087.10|solute carrier family 35, member A4
hg19_v2_chr13_-_33002151_33002273	0.0235987	GAGAUGA	ENST00000495479.1|N4BP2L1|ENSG00000139597.12|NEDD4 binding protein 2-like 1 	ENST00000343281.4|N4BP2L1|ENSG00000139597.12|NEDD4 binding protein 2-like 1 	ENST00000464470.1|N4BP2L1|ENSG00000139597.12|NEDD4 binding protein 2-like 1 	ENST00000380139.4|N4BP2L1|ENSG00000139597.12|NEDD4 binding protein 2-like 1 	ENST00000380133.2|N4BP2L1|ENSG00000139597.12|NEDD4 binding protein 2-like 1
hg19_v2_chr10_-_89623194_89623194	0.0212787	GAGAUGA	ENST00000445946.3|KLLN|ENSG00000227268.3|killin, p53-regulated DNA replication inhibitor
hg19_v2_chr4_-_53525406_53525502	0.0202431	GAGAUGA	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr15_-_44486632_44486664	0.0200631	GAGAUGA	ENST00000484674.1|FRMD5|ENSG00000171877.15|FERM domain containing 5
hg19_v2_chrX_-_48824793_48824793	0.0197673	GAGAUGA	ENST00000376477.1|KCND1|ENSG00000102057.5|potassium voltage-gated channel, Shal-related subfamily, member 1
hg19_v2_chr17_-_46623441_46623441	0.0194328	GAGAUGA	ENST00000330070.4|HOXB2|ENSG00000173917.9|homeobox B2
hg19_v2_chr4_-_24914508_24914524	0.0192875	GAGAUGA	ENST00000504487.1|CCDC149|ENSG00000181982.13|coiled-coil domain containing 149
hg19_v2_chr5_-_142065612_142065638	0.0185985	GAGAUGA	ENST00000360966.5|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic) 	ENST00000411960.1|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic)
hg19_v2_chr19_-_47735918_47736023	0.0181983	GAGAUGA	ENST00000449228.1|BBC3|ENSG00000105327.11|BCL2 binding component 3 	ENST00000300880.7|BBC3|ENSG00000105327.11|BCL2 binding component 3 	ENST00000341983.4|BBC3|ENSG00000105327.11|BCL2 binding component 3
hg19_v2_chr6_-_33282163_33282211	0.0178882	GAGAUGA	ENST00000434618.2|TAPBP|ENSG00000231925.7|TAP binding protein (tapasin) 	ENST00000456592.2|TAPBP|ENSG00000231925.7|TAP binding protein (tapasin)
hg19_v2_chr15_+_68871308_68871354	0.0178732	GAGAUGA	ENST00000261861.5|CORO2B|ENSG00000103647.8|coronin, actin binding protein, 2B
hg19_v2_chr5_+_142149955_142150000	0.0175423	GAGAUGA	ENST00000378004.3|ARHGAP26|ENSG00000145819.11|Rho GTPase activating protein 26
hg19_v2_chr11_+_118477144_118477156	0.0173869	GAGAUGA	ENST00000361417.2|PHLDB1|ENSG00000019144.12|pleckstrin homology-like domain, family B, member 1
hg19_v2_chr12_-_49449107_49449107	0.0172094	GAGAUGA	ENST00000301067.7|KMT2D|ENSG00000167548.10|lysine (K)-specific methyltransferase 2D
hg19_v2_chrX_-_48858630_48858660	0.0168667	GAGAUGA	ENST00000376425.3|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1 	ENST00000376444.3|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1
hg19_v2_chr7_-_131241361_131241398	0.016331	GAGAUGA	ENST00000378555.3|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000322985.9|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000541194.1|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000537928.1|PODXL|ENSG00000128567.12|podocalyxin-like
hg19_v2_chr19_-_40324255_40324296	0.0161742	GAGAUGA	ENST00000593685.1|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 	ENST00000600611.1|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg19_v2_chr2_-_25475120_25475180	0.016048	GAGAUGA	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr1_+_27153173_27153230	0.0159023	GAGAUGA	ENST00000374142.4|ZDHHC18|ENSG00000204160.7|zinc finger, DHHC-type containing 18
hg19_v2_chr12_+_50898881_50898907	0.0156779	GAGAUGA	ENST00000301180.5|DIP2B|ENSG00000066084.8|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg19_v2_chr5_-_158526756_158526797	0.0156323	GAGAUGA	ENST00000313708.6|EBF1|ENSG00000164330.12|early B-cell factor 1 	ENST00000517373.1|EBF1|ENSG00000164330.12|early B-cell factor 1
hg19_v2_chr11_-_130184555_130184581	0.0148751	GAGAUGA	ENST00000525842.1|ZBTB44|ENSG00000196323.7|zinc finger and BTB domain containing 44
hg19_v2_chr6_-_91296602_91296721	0.0148725	GAGAUGA	ENST00000369325.3|MAP3K7|ENSG00000135341.13|mitogen-activated protein kinase kinase kinase 7 	ENST00000369327.3|MAP3K7|ENSG00000135341.13|mitogen-activated protein kinase kinase kinase 7
hg19_v2_chr5_+_71403061_71403169	0.0142268	GAGAUGA	ENST00000512974.1|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B 	ENST00000296755.7|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B
hg19_v2_chr8_-_18871159_18871201	0.0137622	GAGAUGA	ENST00000327040.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3 	ENST00000440756.2|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr12_-_25403737_25403881	0.0131397	GAGAUGA	ENST00000256078.4|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000556131.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000311936.3|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000557334.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog
hg19_v2_chr19_+_37960240_37960299	0.0121262	GAGAUGA	ENST00000388801.3|ZNF570|ENSG00000171827.6|zinc finger protein 570
hg19_v2_chr1_+_87794150_87794172	0.0119321	GAGAUGA	ENST00000370544.5|LMO4|ENSG00000143013.8|LIM domain only 4
hg19_v2_chr7_+_6144514_6144614	0.0118993	GAGAUGA	ENST00000306177.5|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42 	ENST00000465073.2|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42
hg19_v2_chr2_-_96931679_96931756	0.0117416	GAGAUGA	ENST00000258439.3|TMEM127|ENSG00000135956.4|transmembrane protein 127 	ENST00000432959.1|TMEM127|ENSG00000135956.4|transmembrane protein 127
hg19_v2_chr6_+_76458909_76458934	0.0116959	GAGAUGA	ENST00000369981.3|MYO6|ENSG00000196586.9|myosin VI 	ENST00000369985.4|MYO6|ENSG00000196586.9|myosin VI
hg19_v2_chr1_+_62208091_62208182	0.0113664	GAGAUGA	ENST00000316485.6|INADL|ENSG00000132849.14|InaD-like (Drosophila) 	ENST00000371158.2|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr3_+_113465866_113465925	0.0112557	GAGAUGA	ENST00000273398.3|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000538620.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000496747.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000475322.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
hg19_v2_chr1_-_211752073_211752084	0.0110429	GAGAUGA	ENST00000367001.4|SLC30A1|ENSG00000170385.9|solute carrier family 30 (zinc transporter), member 1
hg19_v2_chr5_-_126366500_126366547	0.0109679	GAGAUGA	ENST00000308660.5|MARCH3|ENSG00000173926.5|membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase
hg19_v2_chr11_+_113930291_113930339	0.010888	GAGAUGA	ENST00000335953.4|ZBTB16|ENSG00000109906.9|zinc finger and BTB domain containing 16
hg19_v2_chr14_+_21538429_21538469	0.0107143	GAGAUGA	ENST00000298694.4|ARHGEF40|ENSG00000165801.5|Rho guanine nucleotide exchange factor (GEF) 40 	ENST00000555038.1|ARHGEF40|ENSG00000165801.5|Rho guanine nucleotide exchange factor (GEF) 40
hg19_v2_chr16_+_70148230_70148275	0.010497	GAGAUGA	ENST00000398122.3|PDPR|ENSG00000090857.9|pyruvate dehydrogenase phosphatase regulatory subunit 	ENST00000568530.1|PDPR|ENSG00000090857.9|pyruvate dehydrogenase phosphatase regulatory subunit
hg19_v2_chr10_-_30024716_30024739	0.0104691	GAGAUGA	ENST00000375398.2|SVIL|ENSG00000197321.10|supervillin 	ENST00000375400.3|SVIL|ENSG00000197321.10|supervillin
hg19_v2_chr19_-_47128294_47128375	0.010374	GAGAUGA	ENST00000596260.1|PTGIR|ENSG00000160013.4|prostaglandin I2 (prostacyclin) receptor (IP) 	ENST00000597185.1|PTGIR|ENSG00000160013.4|prostaglandin I2 (prostacyclin) receptor (IP) 	ENST00000598865.1|PTGIR|ENSG00000160013.4|prostaglandin I2 (prostacyclin) receptor (IP) 	ENST00000594275.1|PTGIR|ENSG00000160013.4|prostaglandin I2 (prostacyclin) receptor (IP) 	ENST00000291294.2|PTGIR|ENSG00000160013.4|prostaglandin I2 (prostacyclin) receptor (IP)
hg19_v2_chr5_-_38595498_38595514	0.0102093	GAGAUGA	ENST00000263409.4|LIFR|ENSG00000113594.5|leukemia inhibitory factor receptor alpha
hg19_v2_chrX_-_73834449_73834481	0.0101988	GAGAUGA	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chr10_+_70320413_70320413	0.00993679	GAGAUGA	ENST00000373644.4|TET1|ENSG00000138336.8|tet methylcytosine dioxygenase 1
hg19_v2_chr11_-_9336234_9336327	0.0097762	GAGAUGA	ENST00000528080.1|TMEM41B|ENSG00000166471.6|transmembrane protein 41B
hg19_v2_chr15_+_77287426_77287487	0.00973033	GAGAUGA	ENST00000558012.1|PSTPIP1|ENSG00000140368.8|proline-serine-threonine phosphatase interacting protein 1 	ENST00000267939.5|PSTPIP1|ENSG00000140368.8|proline-serine-threonine phosphatase interacting protein 1 	ENST00000379595.3|PSTPIP1|ENSG00000140368.8|proline-serine-threonine phosphatase interacting protein 1
hg19_v2_chr2_+_97481974_97482015	0.00966504	GAGAUGA	ENST00000377060.3|CNNM3|ENSG00000168763.11|cyclin M3 	ENST00000305510.3|CNNM3|ENSG00000168763.11|cyclin M3
hg19_v2_chr1_-_231560790_231560790	0.00962711	GAGAUGA	ENST00000366641.3|EGLN1|ENSG00000135766.8|egl-9 family hypoxia-inducible factor 1
hg19_v2_chr2_-_69870835_69870853	0.00928154	GAGAUGA	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr2_+_86947296_86947434	0.009254	GAGAUGA	ENST00000283632.4|RMND5A|ENSG00000153561.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v2_chr7_+_142985308_142985453	0.00922504	GAGAUGA	ENST00000310447.5|CASP2|ENSG00000106144.15|caspase 2, apoptosis-related cysteine peptidase
hg19_v2_chr16_+_50187556_50187779	0.00897569	GAGAUGA	ENST00000561678.1|PAPD5|ENSG00000121274.8|PAP associated domain containing 5 	ENST00000357464.3|PAPD5|ENSG00000121274.8|PAP associated domain containing 5
hg19_v2_chr5_+_169064245_169064303	0.00865512	GAGAUGA	ENST00000256935.8|DOCK2|ENSG00000134516.11|dedicator of cytokinesis 2
hg19_v2_chr20_+_42295745_42295797	0.00847059	GAGAUGA	ENST00000396863.4|MYBL2|ENSG00000101057.11|v-myb avian myeloblastosis viral oncogene homolog-like 2 	ENST00000217026.4|MYBL2|ENSG00000101057.11|v-myb avian myeloblastosis viral oncogene homolog-like 2
hg19_v2_chr5_+_154092396_154092462	0.00840817	GAGAUGA	ENST00000336314.4|LARP1|ENSG00000155506.12|La ribonucleoprotein domain family, member 1
hg19_v2_chr7_-_128695147_128695203	0.00830029	GAGAUGA	ENST00000482320.1|TNPO3|ENSG00000064419.9|transportin 3 	ENST00000393245.1|TNPO3|ENSG00000064419.9|transportin 3 	ENST00000471234.1|TNPO3|ENSG00000064419.9|transportin 3
hg19_v2_chr9_-_123476719_123476810	0.00794854	GAGAUGA	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr11_-_26743546_26743571	0.00780526	GAGAUGA	ENST00000280467.6|SLC5A12|ENSG00000148942.10|solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 	ENST00000396005.3|SLC5A12|ENSG00000148942.10|solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
hg19_v2_chr22_-_22221900_22221970	0.00747683	GAGAUGA	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr4_+_15004165_15004298	0.00736402	GAGAUGA	ENST00000538197.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000541112.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000442003.2|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2
hg19_v2_chr12_+_69864129_69864222	0.00723879	GAGAUGA	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr2_-_206950781_206950947	0.00715539	GAGAUGA	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr17_-_18908040_18908117	0.00691361	GAGAUGA	ENST00000388995.6|FAM83G|ENSG00000188522.10|family with sequence similarity 83, member G
hg19_v2_chr5_+_141488070_141488094	0.00676955	GAGAUGA	ENST00000253814.4|NDFIP1|ENSG00000131507.9|Nedd4 family interacting protein 1
hg19_v2_chr12_-_32908809_32908840	0.00670964	GAGAUGA	ENST00000324868.8|YARS2|ENSG00000139131.8|tyrosyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr1_+_178062855_178062903	0.00656321	GAGAUGA	ENST00000448150.3|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chr20_+_30865429_30865480	0.00652459	GAGAUGA	ENST00000375712.3|KIF3B|ENSG00000101350.6|kinesin family member 3B
hg19_v2_chr17_-_61920280_61920425	0.00649737	GAGAUGA	ENST00000448276.2|SMARCD2|ENSG00000108604.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 	ENST00000577990.1|SMARCD2|ENSG00000108604.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
hg19_v2_chr17_+_61086917_61086921	0.0064687	GAGAUGA	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr1_+_2323260_2323329	0.00640149	GAGAUGA	ENST00000378518.1|RER1|ENSG00000157916.14|retention in endoplasmic reticulum sorting receptor 1 	ENST00000605895.1|RER1|ENSG00000157916.14|retention in endoplasmic reticulum sorting receptor 1 	ENST00000378513.3|RER1|ENSG00000157916.14|retention in endoplasmic reticulum sorting receptor 1 	ENST00000306256.9|RER1|ENSG00000157916.14|retention in endoplasmic reticulum sorting receptor 1 	ENST00000378512.1|RER1|ENSG00000157916.14|retention in endoplasmic reticulum sorting receptor 1
hg19_v2_chr3_+_128444965_128444985	0.00637423	GAGAUGA	ENST00000265062.3|RAB7A|ENSG00000075785.8|RAB7A, member RAS oncogene family
hg19_v2_chr2_-_85839146_85839198	0.00627643	GAGAUGA	ENST00000306336.5|C2orf68|ENSG00000168887.6|chromosome 2 open reading frame 68 	ENST00000409734.3|C2orf68|ENSG00000168887.6|chromosome 2 open reading frame 68
hg19_v2_chr2_-_118771701_118771727	0.00614557	GAGAUGA	ENST00000376300.2|CCDC93|ENSG00000125633.6|coiled-coil domain containing 93 	ENST00000319432.5|CCDC93|ENSG00000125633.6|coiled-coil domain containing 93
hg19_v2_chr2_-_9563319_9563379	0.00614121	GAGAUGA	ENST00000497105.1|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1 	ENST00000360635.3|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1 	ENST00000359712.3|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1
hg19_v2_chr1_+_51701924_51702001	0.00612741	GAGAUGA	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chr6_+_114178512_114178586	0.00581512	GAGAUGA	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr2_+_181845298_181845378	0.00572987	GAGAUGA	ENST00000410062.4|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3
hg19_v2_chr19_-_14629224_14629262	0.00564798	GAGAUGA	ENST00000254322.2|DNAJB1|ENSG00000132002.3|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v2_chr11_+_76494253_76494317	0.00555448	GAGAUGA	ENST00000333090.4|TSKU|ENSG00000182704.6|tsukushi, small leucine rich proteoglycan
hg19_v2_chr5_-_154317740_154317787	0.00541301	GAGAUGA	ENST00000285873.7|GEMIN5|ENSG00000082516.8|gem (nuclear organelle) associated protein 5
hg19_v2_chr12_+_60083118_60083157	0.00537805	GAGAUGA	ENST00000261187.4|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000543448.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr6_+_32936353_32936437	0.00534251	GAGAUGA	ENST00000374825.4|BRD2|ENSG00000204256.8|bromodomain containing 2
hg19_v2_chr7_+_2671568_2671606	0.00525862	GAGAUGA	ENST00000258796.7|TTYH3|ENSG00000136295.10|tweety family member 3
hg19_v2_chr4_+_44680429_44680498	0.00503654	GAGAUGA	ENST00000281543.5|GUF1|ENSG00000151806.9|GUF1 GTPase homolog (S. cerevisiae)
hg19_v2_chr1_+_36348790_36348822	0.00488261	GAGAUGA	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr15_+_39873268_39873294	0.00480473	GAGAUGA	ENST00000397591.2|THBS1|ENSG00000137801.9|thrombospondin 1 	ENST00000260356.5|THBS1|ENSG00000137801.9|thrombospondin 1
hg19_v2_chr18_-_60987220_60987386	0.00478127	GAGAUGA	ENST00000398117.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr19_+_3359561_3359681	0.00454345	GAGAUGA	ENST00000589123.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000346156.5|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000395111.3|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000586919.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor)
hg19_v2_chr7_+_127292234_127292260	0.00450509	GAGAUGA	ENST00000354725.3|SND1|ENSG00000197157.6|staphylococcal nuclease and tudor domain containing 1
hg19_v2_chr8_-_82024290_82024310	0.00443176	GAGAUGA	ENST00000220597.4|PAG1|ENSG00000076641.4|phosphoprotein associated with glycosphingolipid microdomains 1
hg19_v2_chr12_-_65146636_65146651	0.00442168	GAGAUGA	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr16_-_23521710_23521826	0.00432059	GAGAUGA	ENST00000562117.1|GGA2|ENSG00000103365.11|golgi-associated, gamma adaptin ear containing, ARF binding protein 2 	ENST00000567468.1|GGA2|ENSG00000103365.11|golgi-associated, gamma adaptin ear containing, ARF binding protein 2 	ENST00000562944.1|GGA2|ENSG00000103365.11|golgi-associated, gamma adaptin ear containing, ARF binding protein 2 	ENST00000309859.4|GGA2|ENSG00000103365.11|golgi-associated, gamma adaptin ear containing, ARF binding protein 2
hg19_v2_chr6_+_118228657_118228715	0.00416453	GAGAUGA	ENST00000360388.4|SLC35F1|ENSG00000196376.6|solute carrier family 35, member F1
hg19_v2_chr1_+_6673745_6673830	0.00413721	GAGAUGA	ENST00000377648.4|PHF13|ENSG00000116273.5|PHD finger protein 13
hg19_v2_chrX_+_9983602_9983602	0.00394398	GAGAUGA	ENST00000380861.4|WWC3|ENSG00000047644.13|WWC family member 3
hg19_v2_chr2_+_85198216_85198305	0.00372153	GAGAUGA	ENST00000456682.1|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1 	ENST00000409785.4|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1
hg19_v2_chr1_-_41131326_41131400	0.00369806	GAGAUGA	ENST00000372684.3|RIMS3|ENSG00000117016.5|regulating synaptic membrane exocytosis 3
hg19_v2_chr2_+_233562015_233562062	0.00367189	GAGAUGA	ENST00000427233.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000373566.3|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000373563.4|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000428883.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000456491.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409480.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000421433.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000425040.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000430720.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409547.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000423659.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409196.3|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409451.3|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000429187.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000440945.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2
hg19_v2_chrX_-_110655391_110655449	0.0036513	GAGAUGA	ENST00000356915.2|DCX|ENSG00000077279.12|doublecortin 	ENST00000356220.3|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr2_+_220042933_220042985	0.00356097	GAGAUGA	ENST00000430297.2|FAM134A|ENSG00000144567.6|family with sequence similarity 134, member A
hg19_v2_chr8_-_37756972_37757022	0.00345016	GAGAUGA	ENST00000330843.4|RAB11FIP1|ENSG00000156675.11|RAB11 family interacting protein 1 (class I) 	ENST00000522727.1|RAB11FIP1|ENSG00000156675.11|RAB11 family interacting protein 1 (class I) 	ENST00000287263.4|RAB11FIP1|ENSG00000156675.11|RAB11 family interacting protein 1 (class I)
hg19_v2_chr16_-_79634595_79634620	0.0033584	GAGAUGA	ENST00000326043.4|MAF|ENSG00000178573.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog 	ENST00000393350.1|MAF|ENSG00000178573.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
hg19_v2_chr17_+_37026106_37026123	0.00322685	GAGAUGA	ENST00000318008.6|LASP1|ENSG00000002834.13|LIM and SH3 protein 1
hg19_v2_chr12_+_8234807_8234855	0.00317429	GAGAUGA	ENST00000339754.5|NECAP1|ENSG00000089818.12|NECAP endocytosis associated 1
hg19_v2_chr20_-_50159198_50159299	0.00311682	GAGAUGA	ENST00000371564.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000396009.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000610033.1|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg19_v2_chr22_+_40390930_40390994	0.00308213	GAGAUGA	ENST00000333407.6|FAM83F|ENSG00000133477.12|family with sequence similarity 83, member F
hg19_v2_chr16_+_67063036_67063088	0.00297415	GAGAUGA	ENST00000290858.6|CBFB|ENSG00000067955.9|core-binding factor, beta subunit 	ENST00000564034.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr15_+_31619013_31619095	0.00275307	GAGAUGA	ENST00000307145.3|KLF13|ENSG00000169926.5|Kruppel-like factor 13
hg19_v2_chr1_-_155532484_155532605	0.00275074	GAGAUGA	ENST00000368346.3|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila) 	ENST00000548830.1|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila)
hg19_v2_chr9_+_130374537_130374568	0.0026552	GAGAUGA	ENST00000373302.3|STXBP1|ENSG00000136854.13|syntaxin binding protein 1 	ENST00000373299.1|STXBP1|ENSG00000136854.13|syntaxin binding protein 1
hg19_v2_chr19_-_51141196_51141302	0.00264045	GAGAUGA	ENST00000338916.4|SYT3|ENSG00000213023.5|synaptotagmin III
hg19_v2_chr15_+_67358163_67358192	0.00257513	GAGAUGA	ENST00000327367.4|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr14_+_90863327_90863356	0.00236844	GAGAUGA	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr9_-_74525658_74525658	0.00232188	GAGAUGA	ENST00000333421.6|ABHD17B|ENSG00000107362.9|abhydrolase domain containing 17B
hg19_v2_chr10_+_105253661_105253736	0.00222092	GAGAUGA	ENST00000369780.4|NEURL|ENSG00000107954.6|neuralized E3 ubiquitin protein ligase 1
hg19_v2_chr1_+_165796753_165796776	0.00221389	GAGAUGA	ENST00000367879.4|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr11_-_77532050_77532066	0.00221334	GAGAUGA	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr3_+_183873098_183873230	0.00190733	GAGAUGA	ENST00000313143.3|DVL3|ENSG00000161202.13|dishevelled segment polarity protein 3
hg19_v2_chr20_-_40247133_40247194	0.00185409	GAGAUGA	ENST00000373233.3|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6 	ENST00000309279.7|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6
hg19_v2_chrX_-_74145273_74145319	0.00179363	GAGAUGA	ENST00000055682.6|KIAA2022|ENSG00000050030.9|KIAA2022
hg19_v2_chr2_-_190044480_190044605	0.0017814	GAGAUGA	ENST00000374866.3|COL5A2|ENSG00000204262.7|collagen, type V, alpha 2
hg19_v2_chr11_+_57520715_57520776	0.00143322	GAGAUGA	ENST00000524630.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000529919.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000399039.4|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000533189.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1
hg19_v2_chr1_-_205290865_205290891	0.00137573	GAGAUGA	ENST00000367157.3|NUAK2|ENSG00000163545.7|NUAK family, SNF1-like kinase, 2
hg19_v2_chr12_-_53625958_53626036	0.00136753	GAGAUGA	ENST00000327550.3|RARG|ENSG00000172819.12|retinoic acid receptor, gamma 	ENST00000546717.1|RARG|ENSG00000172819.12|retinoic acid receptor, gamma 	ENST00000425354.2|RARG|ENSG00000172819.12|retinoic acid receptor, gamma 	ENST00000394426.1|RARG|ENSG00000172819.12|retinoic acid receptor, gamma
hg19_v2_chr10_+_76871454_76871467	0.00135176	GAGAUGA	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr12_-_54673871_54673925	0.00126333	GAGAUGA	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr6_-_24721054_24721074	0.00125018	GAGAUGA	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr11_+_86748863_86748948	0.00124241	GAGAUGA	ENST00000340353.7|TMEM135|ENSG00000166575.12|transmembrane protein 135
hg19_v2_chr19_-_38806560_38806607	0.00119661	GAGAUGA	ENST00000591755.1|YIF1B|ENSG00000167645.12|Yip1 interacting factor homolog B (S. cerevisiae) 	ENST00000337679.8|YIF1B|ENSG00000167645.12|Yip1 interacting factor homolog B (S. cerevisiae) 	ENST00000339413.6|YIF1B|ENSG00000167645.12|Yip1 interacting factor homolog B (S. cerevisiae)
hg19_v2_chr6_+_163835669_163835693	0.00096798	GAGAUGA	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr1_-_154155595_154155673	0.000630898	GAGAUGA	ENST00000328159.4|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000368531.2|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000323144.7|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000368533.3|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000341372.3|TPM3|ENSG00000143549.15|tropomyosin 3
hg19_v2_chr12_+_103981044_103981061	0.000605417	GAGAUGA	ENST00000388887.2|STAB2|ENSG00000136011.10|stabilin 2
hg19_v2_chr11_-_67236691_67236748	0.000573469	GAGAUGA	ENST00000544903.1|TMEM134|ENSG00000172663.4|transmembrane protein 134 	ENST00000308022.2|TMEM134|ENSG00000172663.4|transmembrane protein 134 	ENST00000393877.3|TMEM134|ENSG00000172663.4|transmembrane protein 134 	ENST00000452789.2|TMEM134|ENSG00000172663.4|transmembrane protein 134
hg19_v2_chr14_-_31495569_31495636	0.000526088	GAGAUGA	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chr1_+_145611010_145611046	0.00048067	GAGAUGA	ENST00000369291.5|RNF115|ENSG00000121848.9|ring finger protein 115
hg19_v2_chr11_+_94501497_94501577	0.000474374	GAGAUGA	ENST00000317829.8|AMOTL1|ENSG00000166025.13|angiomotin like 1 	ENST00000317837.9|AMOTL1|ENSG00000166025.13|angiomotin like 1 	ENST00000433060.2|AMOTL1|ENSG00000166025.13|angiomotin like 1
hg19_v2_chr3_+_185303962_185304021	0.00045249	GAGAUGA	ENST00000296257.5|SENP2|ENSG00000163904.8|SUMO1/sentrin/SMT3 specific peptidase 2
hg19_v2_chr1_+_110527308_110527349	0.000322845	GAGAUGA	ENST00000369799.5|AHCYL1|ENSG00000168710.13|adenosylhomocysteinase-like 1
hg19_v2_chr5_+_141303373_141303421	0.000301883	GAGAUGA	ENST00000432126.2|KIAA0141|ENSG00000081791.4|KIAA0141 	ENST00000194118.4|KIAA0141|ENSG00000081791.4|KIAA0141
hg19_v2_chr9_+_79074068_79074150	0.000215773	GAGAUGA	ENST00000444201.2|GCNT1|ENSG00000187210.8|glucosaminyl (N-acetyl) transferase 1, core 2 	ENST00000376730.4|GCNT1|ENSG00000187210.8|glucosaminyl (N-acetyl) transferase 1, core 2
hg19_v2_chr6_-_43543702_43543812	5.21534e-05	GAGAUGA	ENST00000265351.7|XPO5|ENSG00000124571.13|exportin 5
hg19_v2_chr17_+_56160768_56160786	3.0015e-05	GAGAUGA	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
