hg19_v2_chr1_-_63988846_63988908	0.316166	CCUUCAU	ENST00000283568.8|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin) 	ENST00000371092.3|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin) 	ENST00000271002.10|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin)
hg19_v2_chr6_-_8435706_8435756	0.27186	CCUUCAU	ENST00000379660.4|SLC35B3|ENSG00000124786.8|solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3
hg19_v2_chr16_+_69599861_69599887	0.179714	CCUUCAU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr12_+_40618873_40618889	0.131302	CCUUCAU	ENST00000298910.7|LRRK2|ENSG00000188906.9|leucine-rich repeat kinase 2
hg19_v2_chr12_+_56473628_56473680	0.115079	CCUUCAU	ENST00000549282.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000549061.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000267101.3|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3
hg19_v2_chr10_-_98346801_98346812	0.11309	CCUUCAU	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr12_-_93835665_93835750	0.10049	CCUUCAU	ENST00000552442.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N 	ENST00000550657.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N
hg19_v2_chr2_-_161350305_161350391	0.0984245	CCUUCAU	ENST00000348849.3|RBMS1|ENSG00000153250.13|RNA binding motif, single stranded interacting protein 1
hg19_v2_chr14_-_35182994_35183034	0.0865591	CCUUCAU	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr7_+_94139105_94139197	0.0850312	CCUUCAU	ENST00000297273.4|CASD1|ENSG00000127995.12|CAS1 domain containing 1
hg19_v2_chr6_-_116381918_116381977	0.0828831	CCUUCAU	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr6_-_111136513_111136525	0.0791397	CCUUCAU	ENST00000368911.3|CDK19|ENSG00000155111.10|cyclin-dependent kinase 19
hg19_v2_chr5_+_118407053_118407239	0.0774673	CCUUCAU	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chrX_-_20284958_20285039	0.0755939	CCUUCAU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr1_+_201924619_201924652	0.0750618	CCUUCAU	ENST00000367287.4|TIMM17A|ENSG00000134375.6|translocase of inner mitochondrial membrane 17 homolog A (yeast)
hg19_v2_chr11_+_9406169_9406210	0.0675146	CCUUCAU	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr4_-_83719983_83720085	0.0622904	CCUUCAU	ENST00000319540.4|SCD5|ENSG00000145284.7|stearoyl-CoA desaturase 5
hg19_v2_chr13_+_100153665_100153688	0.0603423	CCUUCAU	ENST00000376387.4|TM9SF2|ENSG00000125304.8|transmembrane 9 superfamily member 2
hg19_v2_chr10_+_98592009_98592061	0.0600684	CCUUCAU	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr7_-_79082867_79082900	0.0574051	CCUUCAU	ENST00000419488.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2 	ENST00000354212.4|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr16_+_22019404_22019604	0.0547333	CCUUCAU	ENST00000542527.2|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000569656.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000562695.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52
hg19_v2_chr21_+_35445827_35445886	0.0540561	CCUUCAU	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chr10_+_70320413_70320413	0.0534174	CCUUCAU	ENST00000373644.4|TET1|ENSG00000138336.8|tet methylcytosine dioxygenase 1
hg19_v2_chr1_-_185286461_185286482	0.0531738	CCUUCAU	ENST00000367498.3|IVNS1ABP|ENSG00000116679.11|influenza virus NS1A binding protein
hg19_v2_chr3_+_150321068_150321123	0.0500043	CCUUCAU	ENST00000471696.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000477889.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000485923.1|SELT|ENSG00000198843.8|Selenoprotein T
hg19_v2_chr15_-_49338748_49338765	0.0492677	CCUUCAU	ENST00000559471.1|SECISBP2L|ENSG00000138593.4|SECIS binding protein 2-like
hg19_v2_chr11_-_85780086_85780161	0.0489593	CCUUCAU	ENST00000532317.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000528256.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000526033.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein
hg19_v2_chr10_+_97803151_97803348	0.0480121	CCUUCAU	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr6_+_88182643_88182722	0.046012	CCUUCAU	ENST00000369556.3|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000544441.1|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369552.4|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369557.5|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1
hg19_v2_chr1_+_214776516_214776565	0.0446507	CCUUCAU	ENST00000366955.3|CENPF|ENSG00000117724.8|centromere protein F, 350/400kDa
hg19_v2_chr2_-_172017343_172017391	0.0426291	CCUUCAU	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr7_-_10979750_10979883	0.0422124	CCUUCAU	ENST00000339600.5|NDUFA4|ENSG00000189043.5|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa
hg19_v2_chr4_+_77870856_77870919	0.040751	CCUUCAU	ENST00000264893.6|SEPT11|ENSG00000138758.7|septin 11 	ENST00000502584.1|SEPT11|ENSG00000138758.7|septin 11 	ENST00000510641.1|SEPT11|ENSG00000138758.7|septin 11
hg19_v2_chr1_+_101361626_101361698	0.0399778	CCUUCAU	ENST00000370112.4|SLC30A7|ENSG00000162695.7|solute carrier family 30 (zinc transporter), member 7
hg19_v2_chrX_-_24045303_24045303	0.0397988	CCUUCAU	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr18_+_74207477_74207568	0.0394565	CCUUCAU	ENST00000532511.1|RP11-17M16.1|ENSG00000220032.4|uncharacterized protein LOC400658
hg19_v2_chr14_+_71374122_71374193	0.0382474	CCUUCAU	ENST00000304743.2|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila) 	ENST00000238570.5|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila)
hg19_v2_chr8_-_127570603_127570648	0.0382332	CCUUCAU	ENST00000304916.3|FAM84B|ENSG00000168672.3|family with sequence similarity 84, member B
hg19_v2_chr3_-_64673289_64673355	0.0381701	CCUUCAU	ENST00000295903.4|ADAMTS9|ENSG00000163638.9|ADAM metallopeptidase with thrombospondin type 1 motif, 9
hg19_v2_chr5_+_115420688_115420751	0.0359685	CCUUCAU	ENST00000274458.4|COMMD10|ENSG00000145781.4|COMM domain containing 10
hg19_v2_chr8_-_99837856_99837955	0.0358941	CCUUCAU	ENST00000518165.1|STK3|ENSG00000104375.11|serine/threonine kinase 3 	ENST00000419617.2|STK3|ENSG00000104375.11|serine/threonine kinase 3
hg19_v2_chr12_+_22778009_22778112	0.0358616	CCUUCAU	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr17_-_46178527_46178566	0.0358135	CCUUCAU	ENST00000393408.3|CBX1|ENSG00000108468.10|chromobox homolog 1
hg19_v2_chr11_-_10315741_10315773	0.03552	CCUUCAU	ENST00000256190.8|SBF2|ENSG00000133812.10|SET binding factor 2
hg19_v2_chr20_+_45947246_45947246	0.032995	CCUUCAU	ENST00000599904.1|AL031666.2|ENSG00000267882.1|HCG2018772; Uncharacterized protein; cDNA FLJ31609 fis, clone NT2RI2002852
hg19_v2_chr8_-_95961578_95961639	0.032679	CCUUCAU	ENST00000448464.2|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1 	ENST00000342697.4|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1
hg19_v2_chr2_-_175869936_175869954	0.0324838	CCUUCAU	ENST00000409900.3|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chrX_+_72783026_72783049	0.0323349	CCUUCAU	ENST00000373504.6|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1 	ENST00000373502.5|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1
hg19_v2_chr8_+_16884740_16884804	0.0321885	CCUUCAU	ENST00000318063.5|MICU3|ENSG00000155970.7|mitochondrial calcium uptake family, member 3
hg19_v2_chr6_-_85474219_85474237	0.0319311	CCUUCAU	ENST00000369663.5|TBX18|ENSG00000112837.12|T-box 18
hg19_v2_chr4_-_10458982_10459007	0.0317177	CCUUCAU	ENST00000326756.3|ZNF518B|ENSG00000178163.3|zinc finger protein 518B
hg19_v2_chr12_-_42538657_42538720	0.0317161	CCUUCAU	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr2_-_85788605_85788632	0.0315503	CCUUCAU	ENST00000233838.4|GGCX|ENSG00000115486.7|gamma-glutamyl carboxylase
hg19_v2_chr9_-_113800317_113800328	0.0314667	CCUUCAU	ENST00000374431.3|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr10_+_31608054_31608156	0.031224	CCUUCAU	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr4_+_15004165_15004298	0.0303602	CCUUCAU	ENST00000538197.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000541112.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000442003.2|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2
hg19_v2_chr4_+_75230853_75230871	0.0297108	CCUUCAU	ENST00000244869.2|EREG|ENSG00000124882.3|epiregulin
hg19_v2_chr16_-_3493528_3493542	0.0296739	CCUUCAU	ENST00000301744.4|ZNF597|ENSG00000167981.4|zinc finger protein 597
hg19_v2_chr13_-_21476900_21476949	0.0295992	CCUUCAU	ENST00000400602.2|XPO4|ENSG00000132953.12|exportin 4 	ENST00000255305.6|XPO4|ENSG00000132953.12|exportin 4
hg19_v2_chr18_+_63418068_63418157	0.0281728	CCUUCAU	ENST00000397968.2|CDH7|ENSG00000081138.9|cadherin 7, type 2
hg19_v2_chr17_-_45266542_45266683	0.0275887	CCUUCAU	ENST00000531206.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000527547.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000446365.2|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000575483.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000066544.3|CDC27|ENSG00000004897.7|cell division cycle 27
hg19_v2_chr3_+_182971018_182971059	0.0274806	CCUUCAU	ENST00000326505.3|B3GNT5|ENSG00000176597.7|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v2_chr2_+_109335929_109336002	0.027435	CCUUCAU	ENST00000283195.6|RANBP2|ENSG00000153201.11|RAN binding protein 2
hg19_v2_chr6_+_46097711_46097736	0.0264621	CCUUCAU	ENST00000321037.4|ENPP4|ENSG00000001561.6|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)
hg19_v2_chr17_+_57697216_57697235	0.0263944	CCUUCAU	ENST00000393043.1|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc) 	ENST00000269122.3|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc)
hg19_v2_chr2_+_182850551_182850607	0.0259597	CCUUCAU	ENST00000452904.1|PPP1R1C|ENSG00000150722.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENST00000409137.3|PPP1R1C|ENSG00000150722.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENST00000280295.3|PPP1R1C|ENSG00000150722.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C
hg19_v2_chrX_+_77166172_77166261	0.0258694	CCUUCAU	ENST00000343533.5|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000350425.4|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000341514.6|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide
hg19_v2_chr9_-_123964114_123964210	0.0257827	CCUUCAU	ENST00000373840.4|RAB14|ENSG00000119396.6|RAB14, member RAS oncogene family
hg19_v2_chr2_+_139259324_139259389	0.0249119	CCUUCAU	ENST00000280098.4|SPOPL|ENSG00000144228.4|speckle-type POZ protein-like
hg19_v2_chr10_+_60272814_60272900	0.0248572	CCUUCAU	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr11_-_22851367_22851411	0.0247053	CCUUCAU	ENST00000354193.4|SVIP|ENSG00000198168.4|small VCP/p97-interacting protein
hg19_v2_chr1_-_51984908_51984952	0.0241466	CCUUCAU	ENST00000371730.2|EPS15|ENSG00000085832.12|epidermal growth factor receptor pathway substrate 15
hg19_v2_chr3_-_142166904_142166916	0.0234607	CCUUCAU	ENST00000264951.4|XRN1|ENSG00000114127.6|5'-3' exoribonuclease 1
hg19_v2_chr12_-_49110613_49110681	0.0233061	CCUUCAU	ENST00000261900.3|CCNT1|ENSG00000129315.5|cyclin T1
hg19_v2_chr11_+_101981169_101981210	0.0232883	CCUUCAU	ENST00000526343.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000282441.5|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000537274.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000345877.2|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr12_+_67663056_67663067	0.0229533	CCUUCAU	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr2_-_202316260_202316308	0.0227532	CCUUCAU	ENST00000332624.3|TRAK2|ENSG00000115993.7|trafficking protein, kinesin binding 2
hg19_v2_chr13_-_31038370_31038509	0.0227496	CCUUCAU	ENST00000399489.1|HMGB1|ENSG00000189403.10|high mobility group box 1 	ENST00000339872.4|HMGB1|ENSG00000189403.10|high mobility group box 1
hg19_v2_chr4_-_16228120_16228164	0.022412	CCUUCAU	ENST00000405303.2|TAPT1|ENSG00000169762.12|transmembrane anterior posterior transformation 1
hg19_v2_chr17_-_4269768_4269835	0.0223511	CCUUCAU	ENST00000396981.2|UBE2G1|ENSG00000132388.8|ubiquitin-conjugating enzyme E2G 1
hg19_v2_chr13_+_53226963_53227023	0.0218696	CCUUCAU	ENST00000343788.6|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000535397.1|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000310528.8|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
hg19_v2_chr21_-_15755446_15755508	0.0217085	CCUUCAU	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr1_+_167190066_167190156	0.021298	CCUUCAU	ENST00000367866.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000429375.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000452019.1|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000420254.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000541643.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1
hg19_v2_chr1_-_169455169_169455241	0.020751	CCUUCAU	ENST00000367804.4|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2 	ENST00000236137.5|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2
hg19_v2_chr5_-_56247935_56247959	0.0204355	CCUUCAU	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr2_-_68479614_68479685	0.0201261	CCUUCAU	ENST00000234310.3|PPP3R1|ENSG00000221823.6|protein phosphatase 3, regulatory subunit B, alpha
hg19_v2_chr11_-_118661828_118661886	0.0195487	CCUUCAU	ENST00000264018.4|DDX6|ENSG00000110367.7|DEAD (Asp-Glu-Ala-Asp) box helicase 6
hg19_v2_chr16_-_71843047_71843104	0.0192737	CCUUCAU	ENST00000299980.4|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000393512.3|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr2_-_11484710_11484812	0.0191968	CCUUCAU	ENST00000315872.6|ROCK2|ENSG00000134318.9|Rho-associated, coiled-coil containing protein kinase 2
hg19_v2_chr3_-_125094093_125094198	0.0189774	CCUUCAU	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr5_+_172483347_172483407	0.018869	CCUUCAU	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr5_-_137878887_137878989	0.0187482	CCUUCAU	ENST00000507939.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000572514.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000499810.2|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000360541.5|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1
hg19_v2_chr8_-_68255912_68255952	0.0185361	CCUUCAU	ENST00000262215.3|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) 	ENST00000519436.1|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
hg19_v2_chr9_+_36572851_36572932	0.0184621	CCUUCAU	ENST00000298048.2|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000538311.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536987.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000545008.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536860.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536329.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000541717.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000543751.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase
hg19_v2_chr7_+_128379346_128379447	0.0183999	CCUUCAU	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr9_+_108210279_108210435	0.0182983	CCUUCAU	ENST00000374716.4|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000374710.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000481272.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000484973.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000394926.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000539376.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like
hg19_v2_chr1_-_179834311_179834311	0.0182517	CCUUCAU	ENST00000553856.1|IFRG15|ENSG00000258664.1|Homo sapiens torsin A interacting protein 2 (TOR1AIP2), transcript variant 1, mRNA.
hg19_v2_chr14_+_57046500_57046529	0.0177667	CCUUCAU	ENST00000261556.6|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr16_-_65155833_65155976	0.0176732	CCUUCAU	ENST00000566827.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000394156.3|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000562998.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast)
hg19_v2_chr4_-_125633876_125633897	0.0174813	CCUUCAU	ENST00000504087.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50 	ENST00000515641.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50
hg19_v2_chr4_-_99851766_99851788	0.0174723	CCUUCAU	ENST00000450253.2|EIF4E|ENSG00000151247.8|eukaryotic translation initiation factor 4E
hg19_v2_chr12_+_57522258_57522313	0.0169018	CCUUCAU	ENST00000553277.1|LRP1|ENSG00000123384.9|low density lipoprotein receptor-related protein 1 	ENST00000243077.3|LRP1|ENSG00000123384.9|low density lipoprotein receptor-related protein 1
hg19_v2_chr10_+_89622870_89622870	0.016584	CCUUCAU	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr15_+_59063478_59063561	0.016477	CCUUCAU	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr11_+_120894781_120894840	0.0159712	CCUUCAU	ENST00000529397.1|TBCEL|ENSG00000154114.8|tubulin folding cofactor E-like 	ENST00000528512.1|TBCEL|ENSG00000154114.8|tubulin folding cofactor E-like 	ENST00000422003.2|TBCEL|ENSG00000154114.8|tubulin folding cofactor E-like
hg19_v2_chr2_+_176957619_176957619	0.0152905	CCUUCAU	ENST00000392539.3|HOXD13|ENSG00000128714.5|homeobox D13
hg19_v2_chr1_+_93913713_93913839	0.0151413	CCUUCAU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr10_-_52383644_52383743	0.0147607	CCUUCAU	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr4_-_39640700_39640712	0.0140305	CCUUCAU	ENST00000295958.5|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr4_+_124320665_124320702	0.0140064	CCUUCAU	ENST00000394339.2|SPRY1|ENSG00000164056.6|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg19_v2_chr17_+_2496971_2497040	0.0134314	CCUUCAU	ENST00000397195.5|PAFAH1B1|ENSG00000007168.8|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg19_v2_chr13_-_108518986_108519083	0.013212	CCUUCAU	ENST00000375915.2|FAM155A|ENSG00000204442.2|family with sequence similarity 155, member A
hg19_v2_chr7_-_127032741_127032777	0.0130383	CCUUCAU	ENST00000393313.1|ZNF800|ENSG00000048405.5|zinc finger protein 800 	ENST00000265827.3|ZNF800|ENSG00000048405.5|zinc finger protein 800 	ENST00000434602.1|ZNF800|ENSG00000048405.5|zinc finger protein 800
hg19_v2_chr1_+_180601139_180601180	0.012897	CCUUCAU	ENST00000367590.4|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1 	ENST00000367589.3|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1
hg19_v2_chr17_+_44668035_44668100	0.0127581	CCUUCAU	ENST00000398238.4|NSF|ENSG00000073969.14|N-ethylmaleimide-sensitive factor 	ENST00000225282.8|NSF|ENSG00000073969.14|N-ethylmaleimide-sensitive factor
hg19_v2_chr18_-_47721447_47721474	0.0124944	CCUUCAU	ENST00000285039.7|MYO5B|ENSG00000167306.14|myosin VB
hg19_v2_chr6_-_31745085_31745112	0.011938	CCUUCAU	ENST00000375686.3|VWA7|ENSG00000204396.6|von Willebrand factor A domain containing 7 	ENST00000447450.1|VWA7|ENSG00000204396.6|von Willebrand factor A domain containing 7
hg19_v2_chr4_+_89513574_89513670	0.0119375	CCUUCAU	ENST00000402738.1|HERC3|ENSG00000138641.11|HECT and RLD domain containing E3 ubiquitin protein ligase 3 	ENST00000431413.1|HERC3|ENSG00000138641.11|HECT and RLD domain containing E3 ubiquitin protein ligase 3 	ENST00000422770.1|HERC3|ENSG00000138641.11|HECT and RLD domain containing E3 ubiquitin protein ligase 3 	ENST00000407637.1|HERC3|ENSG00000138641.11|HECT and RLD domain containing E3 ubiquitin protein ligase 3
hg19_v2_chr20_+_11871371_11871428	0.0119218	CCUUCAU	ENST00000254977.3|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr17_-_36003487_36003498	0.0118427	CCUUCAU	ENST00000394367.3|DDX52|ENSG00000141141.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 	ENST00000349699.2|DDX52|ENSG00000141141.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
hg19_v2_chr6_+_36922209_36922251	0.0116897	CCUUCAU	ENST00000373674.3|PI16|ENSG00000164530.9|peptidase inhibitor 16
hg19_v2_chr12_+_96588143_96588185	0.0116437	CCUUCAU	ENST00000228741.3|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2) 	ENST00000547249.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr9_-_112083229_112083348	0.0115184	CCUUCAU	ENST00000374566.3|EPB41L4B|ENSG00000095203.10|erythrocyte membrane protein band 4.1 like 4B 	ENST00000374557.4|EPB41L4B|ENSG00000095203.10|erythrocyte membrane protein band 4.1 like 4B
hg19_v2_chr18_-_23670546_23670605	0.011472	CCUUCAU	ENST00000542743.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000545952.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000539849.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000415083.2|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18
hg19_v2_chr4_+_113152881_113152912	0.0114556	CCUUCAU	ENST00000274000.5|AP1AR|ENSG00000138660.7|adaptor-related protein complex 1 associated regulatory protein
hg19_v2_chr1_+_70876891_70876917	0.0112678	CCUUCAU	ENST00000411986.2|CTH|ENSG00000116761.7|cystathionase (cystathionine gamma-lyase)
hg19_v2_chr17_+_55333876_55333939	0.011203	CCUUCAU	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr3_+_141106643_141106681	0.0110891	CCUUCAU	ENST00000514251.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr7_-_108096822_108096889	0.0107299	CCUUCAU	ENST00000379028.3|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule 	ENST00000413765.2|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule 	ENST00000379022.4|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule
hg19_v2_chr2_+_183989083_183989151	0.010564	CCUUCAU	ENST00000295119.4|NUP35|ENSG00000163002.8|nucleoporin 35kDa
hg19_v2_chr9_-_74525658_74525658	0.010012	CCUUCAU	ENST00000333421.6|ABHD17B|ENSG00000107362.9|abhydrolase domain containing 17B
hg19_v2_chr20_+_49348081_49348096	0.00967638	CCUUCAU	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr14_+_90863327_90863356	0.00962989	CCUUCAU	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr12_+_111471828_111471975	0.00927669	CCUUCAU	ENST00000261726.6|CUX2|ENSG00000111249.9|cut-like homeobox 2
hg19_v2_chr11_+_120195992_120196023	0.00912367	CCUUCAU	ENST00000314475.2|TMEM136|ENSG00000181264.4|transmembrane protein 136 	ENST00000529187.1|TMEM136|ENSG00000181264.4|transmembrane protein 136
hg19_v2_chr4_+_26862400_26862416	0.00884969	CCUUCAU	ENST00000467011.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000412829.2|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr14_+_19553365_19553365	0.00860741	CCUUCAU	ENST00000409832.3|POTEG|ENSG00000222036.3|POTE ankyrin domain family, member G
hg19_v2_chr2_+_150187020_150187120	0.008435	CCUUCAU	ENST00000334166.4|LYPD6|ENSG00000187123.10|LY6/PLAUR domain containing 6
hg19_v2_chr1_-_24306798_24306828	0.00818807	CCUUCAU	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr5_-_148930960_148931013	0.00812741	CCUUCAU	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr4_-_39979576_39979588	0.00802372	CCUUCAU	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chr4_+_146402925_146402957	0.00768234	CCUUCAU	ENST00000302085.4|SMAD1|ENSG00000170365.5|SMAD family member 1
hg19_v2_chr10_+_18041218_18041227	0.00758259	CCUUCAU	ENST00000480516.1|TMEM236|ENSG00000184040.7|TMEM236	ENST00000457860.1|TMEM236|ENSG00000184040.7|TMEM236
hg19_v2_chr10_-_121356007_121356147	0.00747157	CCUUCAU	ENST00000369093.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1 	ENST00000436547.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1
hg19_v2_chr10_+_28966271_28966437	0.00703494	CCUUCAU	ENST00000375533.3|BAMBI|ENSG00000095739.7|BMP and activin membrane-bound inhibitor
hg19_v2_chr14_-_20020272_20020272	0.00681495	CCUUCAU	ENST00000551509.1|POTEM|ENSG00000187537.9|POTE ankyrin domain family, member M
hg19_v2_chr11_+_33278811_33279133	0.00674877	CCUUCAU	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr17_+_15902694_15902801	0.00671934	CCUUCAU	ENST00000261647.5|TTC19|ENSG00000011295.11|tetratricopeptide repeat domain 19 	ENST00000486880.2|TTC19|ENSG00000011295.11|tetratricopeptide repeat domain 19
hg19_v2_chr15_+_69591235_69591299	0.00666252	CCUUCAU	ENST00000395407.2|PAQR5|ENSG00000137819.9|progestin and adipoQ receptor family member V 	ENST00000558684.1|PAQR5|ENSG00000137819.9|progestin and adipoQ receptor family member V
hg19_v2_chr10_+_70091812_70091832	0.00654608	CCUUCAU	ENST00000265866.7|HNRNPH3|ENSG00000096746.13|heterogeneous nuclear ribonucleoprotein H3 (2H9)
hg19_v2_chr17_+_45608430_45608490	0.00645236	CCUUCAU	ENST00000322157.4|NPEPPS|ENSG00000141279.11|aminopeptidase puromycin sensitive
hg19_v2_chr9_+_33025209_33025279	0.00605204	CCUUCAU	ENST00000330899.4|DNAJA1|ENSG00000086061.11|DnaJ (Hsp40) homolog, subfamily A, member 1 	ENST00000544625.1|DNAJA1|ENSG00000086061.11|DnaJ (Hsp40) homolog, subfamily A, member 1
hg19_v2_chr10_+_60936347_60936358	0.00589247	CCUUCAU	ENST00000373880.4|PHYHIPL|ENSG00000165443.7|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg19_v2_chr13_+_43355683_43355705	0.00576817	CCUUCAU	ENST00000537894.1|FAM216B|ENSG00000179813.2|family with sequence similarity 216, member B
hg19_v2_chr2_+_176987088_176987088	0.00570316	CCUUCAU	ENST00000249499.6|HOXD9|ENSG00000128709.10|homeobox D9
hg19_v2_chr4_+_72204755_72204778	0.00529329	CCUUCAU	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr3_-_135914615_135914701	0.00522621	CCUUCAU	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr14_-_68141535_68141574	0.00520524	CCUUCAU	ENST00000554659.1|VTI1B|ENSG00000100568.6|vesicle transport through interaction with t-SNAREs 1B
hg19_v2_chr2_-_208030647_208030689	0.00482824	CCUUCAU	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr1_+_113933581_113933611	0.00481972	CCUUCAU	ENST00000307546.9|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369615.1|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369611.4|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3
hg19_v2_chr12_+_104682496_104682651	0.00480726	CCUUCAU	ENST00000378070.4|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1
hg19_v2_chr2_-_118771701_118771727	0.00472808	CCUUCAU	ENST00000376300.2|CCDC93|ENSG00000125633.6|coiled-coil domain containing 93 	ENST00000319432.5|CCDC93|ENSG00000125633.6|coiled-coil domain containing 93
hg19_v2_chr4_-_87855851_87855903	0.00456291	CCUUCAU	ENST00000473559.1|C4orf36|ENSG00000163633.6|chromosome 4 open reading frame 36
hg19_v2_chr17_-_62502639_62502849	0.00454266	CCUUCAU	ENST00000225792.5|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000581697.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000584279.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000577922.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr2_-_37193606_37193633	0.00452472	CCUUCAU	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr2_+_204192942_204193038	0.00413473	CCUUCAU	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr2_-_100721178_100721307	0.00373761	CCUUCAU	ENST00000409236.2|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3
hg19_v2_chr11_+_12695944_12695989	0.00350694	CCUUCAU	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chrX_+_7137475_7137504	0.00306979	CCUUCAU	ENST00000217961.4|STS|ENSG00000101846.6|steroid sulfatase (microsomal), isozyme S
hg19_v2_chr4_+_144106080_144106144	0.00279907	CCUUCAU	ENST00000307017.4|USP38|ENSG00000170185.5|ubiquitin specific peptidase 38
hg19_v2_chr3_+_63638372_63638390	0.00275851	CCUUCAU	ENST00000496807.1|SNTN|ENSG00000188817.3|sentan, cilia apical structure protein
hg19_v2_chr2_+_45878790_45878913	0.00254816	CCUUCAU	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr2_+_181845298_181845378	0.00243025	CCUUCAU	ENST00000410062.4|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3
hg19_v2_chr3_-_122233723_122233797	0.00218594	CCUUCAU	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr8_+_28351707_28351781	0.00212218	CCUUCAU	ENST00000537916.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000523546.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000240093.3|FZD3|ENSG00000104290.6|frizzled family receptor 3
hg19_v2_chr16_+_67880574_67880635	0.00202778	CCUUCAU	ENST00000219169.4|NUTF2|ENSG00000102898.7|nuclear transport factor 2
hg19_v2_chr1_-_204380919_204380953	0.00196477	CCUUCAU	ENST00000367188.4|PPP1R15B|ENSG00000158615.8|protein phosphatase 1, regulatory subunit 15B
hg19_v2_chr21_+_33784957_33785031	0.00183802	CCUUCAU	ENST00000401402.3|EVA1C|ENSG00000166979.8|eva-1 homolog C (C. elegans) 	ENST00000382699.3|EVA1C|ENSG00000166979.8|eva-1 homolog C (C. elegans)
hg19_v2_chr1_+_145507587_145507633	0.00171194	CCUUCAU	ENST00000330165.8|RBM8A|ENSG00000131795.8|RNA binding motif protein 8A 	ENST00000369307.3|RBM8A|ENSG00000131795.8|RNA binding motif protein 8A
hg19_v2_chr4_-_185747188_185747273	0.00165636	CCUUCAU	ENST00000507295.1|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1 	ENST00000504900.1|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1 	ENST00000281455.2|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1 	ENST00000454703.2|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1
hg19_v2_chr22_+_20067738_20067771	0.00101642	CCUUCAU	ENST00000351989.3|DGCR8|ENSG00000128191.9|DGCR8 microprocessor complex subunit 	ENST00000383024.2|DGCR8|ENSG00000128191.9|DGCR8 microprocessor complex subunit
hg19_v2_chr3_+_179370517_179370543	0.000983869	CCUUCAU	ENST00000263966.3|USP13|ENSG00000058056.4|ubiquitin specific peptidase 13 (isopeptidase T-3)
hg19_v2_chr20_-_50419055_50419066	0.000942958	CCUUCAU	ENST00000217086.4|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr3_-_141868357_141868393	0.000887374	CCUUCAU	ENST00000489671.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000475734.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000467072.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000499676.2|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr2_+_24714729_24714927	0.000566069	CCUUCAU	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr10_-_27529716_27529756	0.000462399	CCUUCAU	ENST00000375897.3|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5 	ENST00000396271.3|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5
hg19_v2_chr10_+_17794251_17794260	3.70792e-05	CCUUCAU	ENST00000377495.1|TMEM236|ENSG00000148483.7|transmembrane protein 236 	ENST00000338221.5|TMEM236|ENSG00000148483.7|transmembrane protein 236
