hg19_v2_chr5_+_149887672_149887698	0.11822	CCACAGG	ENST00000261797.6|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr17_+_61699766_61699826	0.114731	CCACAGG	ENST00000579585.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000584573.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361733.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361357.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3
hg19_v2_chr17_+_38296576_38296604	0.107025	CCACAGG	ENST00000264645.7|CASC3|ENSG00000108349.10|cancer susceptibility candidate 3
hg19_v2_chr19_-_47616992_47617011	0.105659	CCACAGG	ENST00000253048.5|ZC3H4|ENSG00000130749.5|zinc finger CCCH-type containing 4
hg19_v2_chr1_-_228135599_228135640	0.103358	CCACAGG	ENST00000272164.5|WNT9A|ENSG00000143816.7|wingless-type MMTV integration site family, member 9A
hg19_v2_chr8_-_81787006_81787031	0.100096	CCACAGG	ENST00000327835.3|ZNF704|ENSG00000164684.9|zinc finger protein 704
hg19_v2_chr12_-_56652111_56652183	0.0903699	CCACAGG	ENST00000267116.7|ANKRD52|ENSG00000139645.9|ankyrin repeat domain 52
hg19_v2_chr17_-_4167142_4167281	0.0825852	CCACAGG	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr9_-_131592058_131592100	0.0821521	CCACAGG	ENST00000361256.5|C9orf114|ENSG00000198917.7|chromosome 9 open reading frame 114
hg19_v2_chr11_+_119076745_119076792	0.0807663	CCACAGG	ENST00000264033.4|CBL|ENSG00000110395.4|Cbl proto-oncogene, E3 ubiquitin protein ligase
hg19_v2_chr9_-_127533519_127533576	0.0796688	CCACAGG	ENST00000487099.2|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000344523.4|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000373584.3|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1
hg19_v2_chr19_-_44100275_44100302	0.0773903	CCACAGG	ENST00000422989.1|IRGQ|ENSG00000167378.4|immunity-related GTPase family, Q 	ENST00000598324.1|IRGQ|ENSG00000167378.4|immunity-related GTPase family, Q
hg19_v2_chr3_-_114790179_114790222	0.0759226	CCACAGG	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr4_-_90758227_90758379	0.073671	CCACAGG	ENST00000506691.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394986.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000506244.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394989.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394991.3|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr20_-_50384864_50384943	0.0689671	CCACAGG	ENST00000311637.5|ATP9A|ENSG00000054793.9|ATPase, class II, type 9A 	ENST00000402822.1|ATP9A|ENSG00000054793.9|ATPase, class II, type 9A
hg19_v2_chr11_-_70507901_70507958	0.0685898	CCACAGG	ENST00000449833.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000357171.3|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000449116.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2
hg19_v2_chr20_+_306221_306239	0.0677968	CCACAGG	ENST00000342665.2|SOX12|ENSG00000177732.6|SRY (sex determining region Y)-box 12
hg19_v2_chr19_+_17420340_17420383	0.0675574	CCACAGG	ENST00000359866.4|DDA1|ENSG00000130311.6|DET1 and DDB1 associated 1
hg19_v2_chr1_-_21671968_21672009	0.0661332	CCACAGG	ENST00000415912.2|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chr7_+_140774032_140774032	0.0647555	CCACAGG	ENST00000565468.1|TMEM178B|ENSG00000261115.1|transmembrane protein 178B
hg19_v2_chr19_+_8455077_8455083	0.0643871	CCACAGG	ENST00000328024.6|RAB11B|ENSG00000185236.7|RAB11B, member RAS oncogene family
hg19_v2_chr12_+_74931551_74931656	0.0642816	CCACAGG	ENST00000519948.2|ATXN7L3B|ENSG00000253719.2|ataxin 7-like 3B
hg19_v2_chr2_+_105471969_105471969	0.063877	CCACAGG	ENST00000361360.2|POU3F3|ENSG00000198914.2|POU class 3 homeobox 3
hg19_v2_chr11_+_65122216_65122238	0.0615722	CCACAGG	ENST00000309880.5|TIGD3|ENSG00000173825.6|tigger transposable element derived 3
hg19_v2_chr22_-_38669030_38669045	0.0598745	CCACAGG	ENST00000361906.3|TMEM184B|ENSG00000198792.8|transmembrane protein 184B
hg19_v2_chr6_-_34664612_34664642	0.0590535	CCACAGG	ENST00000374023.3|C6orf106|ENSG00000196821.5|chromosome 6 open reading frame 106 	ENST00000374026.3|C6orf106|ENSG00000196821.5|chromosome 6 open reading frame 106
hg19_v2_chr17_-_79885576_79885624	0.0586203	CCACAGG	ENST00000574686.1|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G 	ENST00000357736.4|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G
hg19_v2_chr19_+_41816053_41816178	0.0580714	CCACAGG	ENST00000269967.3|CCDC97|ENSG00000142039.3|coiled-coil domain containing 97
hg19_v2_chr12_+_57916466_57916527	0.0570955	CCACAGG	ENST00000355673.3|MBD6|ENSG00000166987.10|methyl-CpG binding domain protein 6
hg19_v2_chr17_-_3794021_3794042	0.0565166	CCACAGG	ENST00000381769.2|CAMKK1|ENSG00000004660.10|calcium/calmodulin-dependent protein kinase kinase 1, alpha
hg19_v2_chr5_-_175964366_175964429	0.0564128	CCACAGG	ENST00000274811.4|RNF44|ENSG00000146083.7|ring finger protein 44
hg19_v2_chr17_-_3571934_3571976	0.0563151	CCACAGG	ENST00000225525.3|TAX1BP3|ENSG00000213977.3|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg19_v2_chr12_+_122150646_122150719	0.0557863	CCACAGG	ENST00000449592.2|TMEM120B|ENSG00000188735.8|transmembrane protein 120B
hg19_v2_chr12_+_57943781_57943869	0.0549398	CCACAGG	ENST00000455537.2|KIF5A|ENSG00000155980.7|kinesin family member 5A 	ENST00000286452.5|KIF5A|ENSG00000155980.7|kinesin family member 5A
hg19_v2_chr5_+_42423872_42424026	0.0548733	CCACAGG	ENST00000230882.4|GHR|ENSG00000112964.9|growth hormone receptor 	ENST00000357703.3|GHR|ENSG00000112964.9|growth hormone receptor
hg19_v2_chr3_+_14989076_14989113	0.0547802	CCACAGG	ENST00000413118.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2 	ENST00000425241.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2
hg19_v2_chr19_+_38397839_38397932	0.0527832	CCACAGG	ENST00000222345.6|SIPA1L3|ENSG00000105738.6|signal-induced proliferation-associated 1 like 3
hg19_v2_chr14_-_77279153_77279283	0.0526264	CCACAGG	ENST00000251089.2|ANGEL1|ENSG00000013523.5|angel homolog 1 (Drosophila)
hg19_v2_chr8_+_77593448_77593471	0.0520272	CCACAGG	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr20_+_1875110_1875154	0.0518561	CCACAGG	ENST00000400068.3|SIRPA|ENSG00000198053.7|signal-regulatory protein alpha
hg19_v2_chr20_-_43280361_43280392	0.0518122	CCACAGG	ENST00000372874.4|ADA|ENSG00000196839.8|adenosine deaminase
hg19_v2_chr17_-_43568062_43568110	0.0517075	CCACAGG	ENST00000421073.2|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000584420.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000589780.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000430334.3|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1
hg19_v2_chr17_-_42298331_42298361	0.0503471	CCACAGG	ENST00000343638.5|UBTF|ENSG00000108312.10|upstream binding transcription factor, RNA polymerase I
hg19_v2_chr9_+_116638562_116638606	0.0484318	CCACAGG	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chrX_+_118108571_118108589	0.0483574	CCACAGG	ENST00000304778.7|LONRF3|ENSG00000175556.12|LON peptidase N-terminal domain and ring finger 3
hg19_v2_chr19_+_59055814_59055840	0.0483551	CCACAGG	ENST00000594806.1|TRIM28|ENSG00000130726.7|tripartite motif containing 28 	ENST00000253024.5|TRIM28|ENSG00000130726.7|tripartite motif containing 28 	ENST00000341753.6|TRIM28|ENSG00000130726.7|tripartite motif containing 28
hg19_v2_chr11_+_73087309_73087452	0.0479398	CCACAGG	ENST00000064780.2|RELT|ENSG00000054967.8|RELT tumor necrosis factor receptor 	ENST00000545687.1|RELT|ENSG00000054967.8|RELT tumor necrosis factor receptor
hg19_v2_chr16_+_70332956_70333130	0.0468847	CCACAGG	ENST00000288071.6|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000393657.2|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000355992.3|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000567706.1|RP11-529K1.3|ENSG00000260537.1|Uncharacterized protein
hg19_v2_chr6_-_116601044_116601106	0.0467336	CCACAGG	ENST00000368608.3|TSPYL1|ENSG00000189241.6|TSPY-like 1
hg19_v2_chr16_+_31085714_31085783	0.0464224	CCACAGG	ENST00000300850.5|ZNF646|ENSG00000167395.10|zinc finger protein 646 	ENST00000564189.1|ZNF646|ENSG00000167395.10|zinc finger protein 646 	ENST00000428260.1|ZNF646|ENSG00000167395.10|zinc finger protein 646
hg19_v2_chr7_+_97736197_97736211	0.0456724	CCACAGG	ENST00000297293.5|LMTK2|ENSG00000164715.5|lemur tyrosine kinase 2
hg19_v2_chr2_-_96931679_96931756	0.0456611	CCACAGG	ENST00000258439.3|TMEM127|ENSG00000135956.4|transmembrane protein 127 	ENST00000432959.1|TMEM127|ENSG00000135956.4|transmembrane protein 127
hg19_v2_chr1_+_36348790_36348822	0.0456452	CCACAGG	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chrX_-_153237258_153237295	0.045475	CCACAGG	ENST00000310441.7|HCFC1|ENSG00000172534.9|host cell factor C1 (VP16-accessory protein)
hg19_v2_chr11_-_60929074_60929172	0.044315	CCACAGG	ENST00000301765.5|VPS37C|ENSG00000167987.6|vacuolar protein sorting 37 homolog C (S. cerevisiae)
hg19_v2_chr3_+_48956249_48956330	0.0439789	CCACAGG	ENST00000452882.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000430423.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000356401.4|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000449376.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000420814.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000449729.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000433170.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2
hg19_v2_chr9_-_14314066_14314075	0.043767	CCACAGG	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr11_-_64901978_64902009	0.0436681	CCACAGG	ENST00000294256.8|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin 	ENST00000377190.3|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin
hg19_v2_chr16_+_2587998_2588011	0.0436561	CCACAGG	ENST00000441549.3|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1 	ENST00000268673.7|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1
hg19_v2_chr22_-_30642728_30642754	0.0434162	CCACAGG	ENST00000403987.3|LIF|ENSG00000128342.4|leukemia inhibitory factor
hg19_v2_chr20_-_44718538_44718612	0.0432829	CCACAGG	ENST00000290231.6|NCOA5|ENSG00000124160.7|nuclear receptor coactivator 5 	ENST00000372291.3|NCOA5|ENSG00000124160.7|nuclear receptor coactivator 5
hg19_v2_chr15_+_40763150_40763285	0.0431138	CCACAGG	ENST00000306243.5|CHST14|ENSG00000169105.6|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 	ENST00000559991.1|CHST14|ENSG00000169105.6|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
hg19_v2_chr15_+_91473403_91473422	0.042705	CCACAGG	ENST00000394275.2|UNC45A|ENSG00000140553.12|unc-45 homolog A (C. elegans)
hg19_v2_chr22_-_42017021_42017100	0.0425695	CCACAGG	ENST00000263256.6|DESI1|ENSG00000100418.7|desumoylating isopeptidase 1
hg19_v2_chr10_-_126432619_126432663	0.0423624	CCACAGG	ENST00000337318.3|FAM53B|ENSG00000189319.9|family with sequence similarity 53, member B
hg19_v2_chr19_+_55738587_55738587	0.04192	CCACAGG	ENST00000598855.1|AC010327.2|ENSG00000269808.1|Uncharacterized protein; cDNA FLJ45856 fis, clone OCBBF2025631
hg19_v2_chr2_-_43453734_43453751	0.0409841	CCACAGG	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr14_-_20929624_20929771	0.0405865	CCACAGG	ENST00000398020.4|TMEM55B|ENSG00000165782.6|transmembrane protein 55B 	ENST00000250489.4|TMEM55B|ENSG00000165782.6|transmembrane protein 55B
hg19_v2_chr11_+_63580855_63580889	0.0400875	CCACAGG	ENST00000294244.4|C11orf84|ENSG00000168005.4|chromosome 11 open reading frame 84
hg19_v2_chr14_+_70078303_70078321	0.0397471	CCACAGG	ENST00000342745.4|KIAA0247|ENSG00000100647.7|KIAA0247
hg19_v2_chr20_+_44462430_44462476	0.0395343	CCACAGG	ENST00000462307.1|SNX21|ENSG00000124104.14|sorting nexin family member 21
hg19_v2_chr3_-_44519131_44519186	0.0392402	CCACAGG	ENST00000425708.2|ZNF445|ENSG00000185219.11|zinc finger protein 445 	ENST00000396077.2|ZNF445|ENSG00000185219.11|zinc finger protein 445
hg19_v2_chr15_+_40733387_40733416	0.0380382	CCACAGG	ENST00000416165.1|BAHD1|ENSG00000140320.7|bromo adjacent homology domain containing 1
hg19_v2_chr14_+_102786063_102786112	0.0375125	CCACAGG	ENST00000442396.2|ZNF839|ENSG00000022976.11|zinc finger protein 839 	ENST00000262236.5|ZNF839|ENSG00000022976.11|zinc finger protein 839
hg19_v2_chr1_+_43855560_43855640	0.037495	CCACAGG	ENST00000562955.1|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse)
hg19_v2_chr14_-_77787198_77787244	0.03746	CCACAGG	ENST00000261534.4|POMT2|ENSG00000009830.7|protein-O-mannosyltransferase 2
hg19_v2_chr14_+_100705322_100705360	0.0370147	CCACAGG	ENST00000262238.4|YY1|ENSG00000100811.6|YY1 transcription factor
hg19_v2_chr10_+_99400443_99400497	0.0369852	CCACAGG	ENST00000370631.3|PI4K2A|ENSG00000155252.12|phosphatidylinositol 4-kinase type 2 alpha
hg19_v2_chr3_-_66551351_66551356	0.036802	CCACAGG	ENST00000273261.3|LRIG1|ENSG00000144749.9|leucine-rich repeats and immunoglobulin-like domains 1
hg19_v2_chr9_-_33264676_33264761	0.0366772	CCACAGG	ENST00000472232.3|BAG1|ENSG00000107262.12|BCL2-associated athanogene 	ENST00000379704.2|BAG1|ENSG00000107262.12|BCL2-associated athanogene
hg19_v2_chr1_-_151300160_151300196	0.036083	CCACAGG	ENST00000368874.4|PI4KB|ENSG00000143393.12|phosphatidylinositol 4-kinase, catalytic, beta
hg19_v2_chr3_+_127771212_127771316	0.0356283	CCACAGG	ENST00000243253.3|SEC61A1|ENSG00000058262.5|Sec61 alpha 1 subunit (S. cerevisiae) 	ENST00000481210.1|SEC61A1|ENSG00000058262.5|Sec61 alpha 1 subunit (S. cerevisiae)
hg19_v2_chr10_-_75571341_75571364	0.0355243	CCACAGG	ENST00000309979.6|NDST2|ENSG00000166507.12|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
hg19_v2_chr1_+_27153173_27153230	0.0354938	CCACAGG	ENST00000374142.4|ZDHHC18|ENSG00000204160.7|zinc finger, DHHC-type containing 18
hg19_v2_chr3_+_51428704_51428737	0.0354851	CCACAGG	ENST00000323686.4|RBM15B|ENSG00000179837.6|RNA binding motif protein 15B
hg19_v2_chr9_+_133710453_133710453	0.0350957	CCACAGG	ENST00000318560.5|ABL1|ENSG00000097007.13|c-abl oncogene 1, non-receptor tyrosine kinase
hg19_v2_chr10_+_99344104_99344152	0.0349323	CCACAGG	ENST00000555577.1|PI4K2A|ENSG00000155252.12|phosphatidylinositol 4-kinase type 2 alpha 	ENST00000370649.3|PI4K2A|ENSG00000249967.1|Phosphatidylinositol 4-kinase type 2-alpha; Uncharacterized protein
hg19_v2_chr14_-_68283291_68283323	0.0343132	CCACAGG	ENST00000555452.1|ZFYVE26|ENSG00000072121.11|zinc finger, FYVE domain containing 26 	ENST00000347230.4|ZFYVE26|ENSG00000072121.11|zinc finger, FYVE domain containing 26
hg19_v2_chr2_-_200322723_200322819	0.0338759	CCACAGG	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr9_-_95432536_95432560	0.033184	CCACAGG	ENST00000287996.3|IPPK|ENSG00000127080.5|inositol 1,3,4,5,6-pentakisphosphate 2-kinase
hg19_v2_chr6_-_30585009_30585028	0.0331573	CCACAGG	ENST00000376511.2|PPP1R10|ENSG00000204569.5|protein phosphatase 1, regulatory subunit 10
hg19_v2_chr15_+_89631381_89631391	0.0330287	CCACAGG	ENST00000352732.5|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr5_-_180242534_180242567	0.0326266	CCACAGG	ENST00000333055.3|MGAT1|ENSG00000131446.11|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 	ENST00000513431.1|MGAT1|ENSG00000131446.11|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg19_v2_chr16_+_3019246_3019304	0.032586	CCACAGG	ENST00000318782.8|PAQR4|ENSG00000162073.9|progestin and adipoQ receptor family member IV 	ENST00000293978.8|PAQR4|ENSG00000162073.9|progestin and adipoQ receptor family member IV
hg19_v2_chr7_+_44084262_44084332	0.0322181	CCACAGG	ENST00000456905.1|DBNL|ENSG00000136279.14|drebrin-like 	ENST00000440166.1|DBNL|ENSG00000136279.14|drebrin-like 	ENST00000452943.1|DBNL|ENSG00000136279.14|drebrin-like 	ENST00000468694.1|DBNL|ENSG00000136279.14|drebrin-like 	ENST00000494774.1|DBNL|ENSG00000136279.14|drebrin-like 	ENST00000490734.2|DBNL|ENSG00000136279.14|drebrin-like
hg19_v2_chr1_-_229569834_229569849	0.0321794	CCACAGG	ENST00000366684.3|ACTA1|ENSG00000143632.10|actin, alpha 1, skeletal muscle 	ENST00000366683.2|ACTA1|ENSG00000143632.10|actin, alpha 1, skeletal muscle
hg19_v2_chr5_-_137090028_137090075	0.0321007	CCACAGG	ENST00000314940.4|HNRNPA0|ENSG00000177733.4|heterogeneous nuclear ribonucleoprotein A0
hg19_v2_chr20_+_62526467_62526540	0.0319463	CCACAGG	ENST00000369911.2|DNAJC5|ENSG00000101152.6|DnaJ (Hsp40) homolog, subfamily C, member 5 	ENST00000360864.4|DNAJC5|ENSG00000101152.6|DnaJ (Hsp40) homolog, subfamily C, member 5
hg19_v2_chr17_+_7452189_7452208	0.0316591	CCACAGG	ENST00000293825.6|TNFSF12|ENSG00000239697.6|tumor necrosis factor (ligand) superfamily, member 12
hg19_v2_chr4_+_118955500_118955612	0.031394	CCACAGG	ENST00000296499.5|NDST3|ENSG00000164100.7|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg19_v2_chr1_+_19970657_19970796	0.030926	CCACAGG	ENST00000375136.3|NBL1|ENSG00000158747.9|neuroblastoma 1, DAN family BMP antagonist
hg19_v2_chr12_+_94542459_94542513	0.0304871	CCACAGG	ENST00000258526.4|PLXNC1|ENSG00000136040.4|plexin C1
hg19_v2_chr17_+_42422637_42422655	0.0303396	CCACAGG	ENST00000053867.3|GRN|ENSG00000030582.12|granulin 	ENST00000588143.1|GRN|ENSG00000030582.12|granulin
hg19_v2_chr5_+_154092396_154092462	0.0300339	CCACAGG	ENST00000336314.4|LARP1|ENSG00000155506.12|La ribonucleoprotein domain family, member 1
hg19_v2_chr3_-_32022733_32022809	0.0300171	CCACAGG	ENST00000438237.2|OSBPL10|ENSG00000144645.9|oxysterol binding protein-like 10 	ENST00000396556.2|OSBPL10|ENSG00000144645.9|oxysterol binding protein-like 10
hg19_v2_chr3_-_50374869_50374895	0.0292998	CCACAGG	ENST00000327761.3|RASSF1|ENSG00000068028.13|Ras association (RalGDS/AF-6) domain family member 1
hg19_v2_chr5_+_140044261_140044464	0.029033	CCACAGG	ENST00000358337.5|WDR55|ENSG00000120314.14|WD repeat domain 55
hg19_v2_chr15_+_64443905_64443943	0.0288199	CCACAGG	ENST00000325881.4|SNX22|ENSG00000157734.9|sorting nexin 22
hg19_v2_chr9_+_133884469_133884594	0.02879	CCACAGG	ENST00000361069.4|LAMC3|ENSG00000050555.13|laminin, gamma 3
hg19_v2_chr17_+_73452545_73452685	0.0287862	CCACAGG	ENST00000314256.7|KIAA0195|ENSG00000177728.10|KIAA0195
hg19_v2_chr11_-_75062730_75062775	0.0287403	CCACAGG	ENST00000420843.2|ARRB1|ENSG00000137486.12|arrestin, beta 1 	ENST00000360025.3|ARRB1|ENSG00000137486.12|arrestin, beta 1
hg19_v2_chr17_+_36886478_36886512	0.0284311	CCACAGG	ENST00000439660.2|CISD3|ENSG00000230055.2|CDGSH iron sulfur domain 3
hg19_v2_chr14_+_65171099_65171210	0.0283596	CCACAGG	ENST00000247226.7|PLEKHG3|ENSG00000126822.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
hg19_v2_chr18_+_21693306_21693322	0.0283098	CCACAGG	ENST00000540918.2|TTC39C|ENSG00000168234.8|tetratricopeptide repeat domain 39C
hg19_v2_chr6_+_43737939_43737956	0.0280917	CCACAGG	ENST00000372067.3|VEGFA|ENSG00000112715.16|vascular endothelial growth factor A
hg19_v2_chr3_+_49591881_49591940	0.0279196	CCACAGG	ENST00000296452.4|BSN|ENSG00000164061.4|bassoon presynaptic cytomatrix protein
hg19_v2_chr1_+_155290677_155290753	0.0276592	CCACAGG	ENST00000368354.3|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1 	ENST00000368352.5|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chr15_+_89164520_89164559	0.0273265	CCACAGG	ENST00000332810.3|AEN|ENSG00000181026.13|apoptosis enhancing nuclease
hg19_v2_chr11_-_130786400_130786407	0.0273203	CCACAGG	ENST00000265909.4|SNX19|ENSG00000120451.6|sorting nexin 19
hg19_v2_chr4_-_185395672_185395734	0.0268995	CCACAGG	ENST00000393593.3|IRF2|ENSG00000168310.6|interferon regulatory factor 2
hg19_v2_chr15_+_41851211_41851232	0.0265319	CCACAGG	ENST00000263798.3|TYRO3|ENSG00000092445.7|TYRO3 protein tyrosine kinase
hg19_v2_chr17_-_33446820_33446899	0.0265185	CCACAGG	ENST00000592577.1|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000590016.1|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000345365.6|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000360276.3|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000357906.3|RAD51D|ENSG00000185379.16|RAD51 paralog D
hg19_v2_chr11_-_62494821_62494953	0.0264014	CCACAGG	ENST00000301785.5|HNRNPUL2|ENSG00000214753.2|heterogeneous nuclear ribonucleoprotein U-like 2
hg19_v2_chr1_-_151319710_151319833	0.0263787	CCACAGG	ENST00000290524.4|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000437327.1|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000452513.2|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000368870.2|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000452671.2|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression)
hg19_v2_chr9_+_133454943_133455020	0.0262445	CCACAGG	ENST00000319725.9|FUBP3|ENSG00000107164.15|far upstream element (FUSE) binding protein 3
hg19_v2_chr16_+_24741013_24741058	0.0262067	CCACAGG	ENST00000315183.7|TNRC6A|ENSG00000090905.13|trinucleotide repeat containing 6A 	ENST00000395799.3|TNRC6A|ENSG00000090905.13|trinucleotide repeat containing 6A
hg19_v2_chr17_-_21117902_21117937	0.0258236	CCACAGG	ENST00000317635.5|TMEM11|ENSG00000178307.5|transmembrane protein 11
hg19_v2_chr17_+_6918093_6918139	0.0257459	CCACAGG	ENST00000439424.2|C17orf49|ENSG00000258315.1|chromosome 17 open reading frame 49
hg19_v2_chr16_+_30968615_30968628	0.0255437	CCACAGG	ENST00000262519.8|SETD1A|ENSG00000099381.12|SET domain containing 1A
hg19_v2_chr5_+_177631497_177631508	0.0253882	CCACAGG	ENST00000358344.3|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B
hg19_v2_chr8_-_101734907_101735037	0.0253213	CCACAGG	ENST00000318607.5|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000521865.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000520804.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000522720.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000521067.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr5_+_149109825_149109907	0.0252926	CCACAGG	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chr16_-_85722530_85722615	0.0252852	CCACAGG	ENST00000253462.3|GINS2|ENSG00000131153.4|GINS complex subunit 2 (Psf2 homolog)
hg19_v2_chr15_+_91411810_91411828	0.0251639	CCACAGG	ENST00000268171.3|FURIN|ENSG00000140564.6|furin (paired basic amino acid cleaving enzyme)
hg19_v2_chr17_+_42634844_42634925	0.0248391	CCACAGG	ENST00000315323.3|FZD2|ENSG00000180340.5|frizzled family receptor 2
hg19_v2_chr9_-_107690420_107690518	0.0246007	CCACAGG	ENST00000423487.2|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374733.1|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374736.3|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v2_chr3_-_52312636_52312673	0.0242737	CCACAGG	ENST00000296490.3|WDR82|ENSG00000164091.7|WD repeat domain 82
hg19_v2_chr10_+_63661053_63661079	0.0241458	CCACAGG	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr1_+_165796753_165796776	0.0240243	CCACAGG	ENST00000367879.4|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr3_-_48632593_48632770	0.0239876	CCACAGG	ENST00000454817.1|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1 	ENST00000328333.8|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1
hg19_v2_chrX_-_134186144_134186228	0.0237871	CCACAGG	ENST00000370775.2|FAM127B|ENSG00000203950.6|family with sequence similarity 127, member B
hg19_v2_chr6_+_36164487_36164559	0.023669	CCACAGG	ENST00000357641.6|BRPF3|ENSG00000096070.15|bromodomain and PHD finger containing, 3
hg19_v2_chr2_+_26987111_26987210	0.0234925	CCACAGG	ENST00000344420.5|SLC35F6|ENSG00000213699.4|solute carrier family 35, member F6 	ENST00000416475.2|SLC35F6|ENSG00000213699.4|solute carrier family 35, member F6
hg19_v2_chrX_-_124097620_124097666	0.0234647	CCACAGG	ENST00000371130.3|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1 	ENST00000422452.2|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1
hg19_v2_chr15_+_80696666_80696700	0.0232171	CCACAGG	ENST00000303329.4|ARNT2|ENSG00000172379.14|aryl-hydrocarbon receptor nuclear translocator 2
hg19_v2_chr1_-_154943212_154943230	0.0226656	CCACAGG	ENST00000368445.5|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1 	ENST00000448116.2|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1 	ENST00000368449.4|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1
hg19_v2_chr10_-_23003460_23003562	0.0223264	CCACAGG	ENST00000376573.4|PIP4K2A|ENSG00000150867.9|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
hg19_v2_chr20_+_47835884_47835920	0.0222311	CCACAGG	ENST00000371764.4|DDX27|ENSG00000124228.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
hg19_v2_chr19_-_10341948_10341965	0.0219751	CCACAGG	ENST00000590320.1|S1PR2|ENSG00000267534.1|sphingosine-1-phosphate receptor 2 	ENST00000592342.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1 	ENST00000588952.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1
hg19_v2_chr18_+_13218769_13218792	0.0218488	CCACAGG	ENST00000399848.3|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4 	ENST00000361205.4|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr2_-_42180940_42180951	0.0217944	CCACAGG	ENST00000378711.2|C2orf91|ENSG00000205086.5|chromosome 2 open reading frame 91
hg19_v2_chr3_-_170303845_170303869	0.021776	CCACAGG	ENST00000231706.5|SLC7A14|ENSG00000013293.5|solute carrier family 7, member 14
hg19_v2_chr2_-_136873735_136873813	0.0208172	CCACAGG	ENST00000409817.1|CXCR4|ENSG00000121966.6|chemokine (C-X-C motif) receptor 4
hg19_v2_chr11_+_118754475_118754552	0.0207524	CCACAGG	ENST00000292174.4|CXCR5|ENSG00000160683.4|chemokine (C-X-C motif) receptor 5
hg19_v2_chr16_+_11038345_11038366	0.0205116	CCACAGG	ENST00000409790.1|CLEC16A|ENSG00000038532.10|C-type lectin domain family 16, member A
hg19_v2_chr12_+_50898881_50898907	0.0200938	CCACAGG	ENST00000301180.5|DIP2B|ENSG00000066084.8|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg19_v2_chr1_-_16678914_16678989	0.0200048	CCACAGG	ENST00000375592.3|FBXO42|ENSG00000037637.6|F-box protein 42
hg19_v2_chr19_-_14629224_14629262	0.0197686	CCACAGG	ENST00000254322.2|DNAJB1|ENSG00000132002.3|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v2_chr6_+_24495067_24495096	0.0197174	CCACAGG	ENST00000357578.3|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1 	ENST00000546278.1|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1 	ENST00000491546.1|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1
hg19_v2_chr16_-_85833160_85833214	0.0196994	CCACAGG	ENST00000435200.2|EMC8|ENSG00000131148.4|ER membrane protein complex subunit 8
hg19_v2_chr5_-_77844974_77844994	0.019232	CCACAGG	ENST00000515007.2|LHFPL2|ENSG00000145685.9|lipoma HMGIC fusion partner-like 2
hg19_v2_chr5_+_143584814_143584840	0.019147	CCACAGG	ENST00000507359.3|KCTD16|ENSG00000183775.6|potassium channel tetramerization domain containing 16
hg19_v2_chr1_-_32801825_32801980	0.0189845	CCACAGG	ENST00000329421.7|MARCKSL1|ENSG00000175130.6|MARCKS-like 1
hg19_v2_chr16_+_81348528_81348578	0.0182087	CCACAGG	ENST00000568107.2|GAN|ENSG00000261609.3|gigaxonin
hg19_v2_chr17_+_26662730_26662844	0.0180066	CCACAGG	ENST00000226225.2|TNFAIP1|ENSG00000109079.5|tumor necrosis factor, alpha-induced protein 1 (endothelial)
hg19_v2_chr1_-_113249948_113250056	0.0178552	CCACAGG	ENST00000339083.7|RHOC|ENSG00000155366.12|ras homolog family member C 	ENST00000369642.3|RHOC|ENSG00000155366.12|ras homolog family member C
hg19_v2_chr17_+_6916957_6917052	0.0172963	CCACAGG	ENST00000547302.2|RNASEK-C17orf49|ENSG00000161939.14|RNASEK-C17orf49 readthrough
hg19_v2_chr14_+_23776024_23776105	0.0172588	CCACAGG	ENST00000553781.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000556100.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000557236.1|BCL2L2|ENSG00000129473.5|BCL2-like 2 	ENST00000557579.1|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr20_+_37554955_37555067	0.0172012	CCACAGG	ENST00000217429.4|FAM83D|ENSG00000101447.9|family with sequence similarity 83, member D
hg19_v2_chr6_-_62996066_62996137	0.0166457	CCACAGG	ENST00000281156.4|KHDRBS2|ENSG00000112232.8|KH domain containing, RNA binding, signal transduction associated 2
hg19_v2_chr5_+_98104978_98105010	0.0165831	CCACAGG	ENST00000308234.7|RGMB|ENSG00000174136.7|repulsive guidance molecule family member b
hg19_v2_chr4_-_174320687_174320687	0.016413	CCACAGG	ENST00000296506.3|SCRG1|ENSG00000164106.3|stimulator of chondrogenesis 1
hg19_v2_chrX_+_100474711_100474758	0.0163399	CCACAGG	ENST00000402866.1|DRP2|ENSG00000102385.8|dystrophin related protein 2
hg19_v2_chr20_-_39928705_39928740	0.0162423	CCACAGG	ENST00000436099.2|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000309060.3|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000373261.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000436440.2|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000540170.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000557816.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000560361.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3
hg19_v2_chr14_-_21905395_21905419	0.0162296	CCACAGG	ENST00000430710.3|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8 	ENST00000553283.1|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8
hg19_v2_chr2_-_239112347_239112370	0.0162033	CCACAGG	ENST00000457149.1|ILKAP|ENSG00000132323.4|integrin-linked kinase-associated serine/threonine phosphatase 	ENST00000254654.3|ILKAP|ENSG00000132323.4|integrin-linked kinase-associated serine/threonine phosphatase
hg19_v2_chr14_+_71108460_71108508	0.0160133	CCACAGG	ENST00000256367.2|TTC9|ENSG00000133985.2|tetratricopeptide repeat domain 9
hg19_v2_chr1_+_16010779_16010885	0.0158145	CCACAGG	ENST00000375799.3|PLEKHM2|ENSG00000116786.7|pleckstrin homology domain containing, family M (with RUN domain) member 2 	ENST00000375793.2|PLEKHM2|ENSG00000116786.7|pleckstrin homology domain containing, family M (with RUN domain) member 2
hg19_v2_chr18_+_18943554_18943587	0.0154012	CCACAGG	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr8_-_116681221_116681236	0.0153931	CCACAGG	ENST00000395715.3|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr1_-_43833628_43833703	0.0152249	CCACAGG	ENST00000413844.2|ELOVL1|ENSG00000066322.8|ELOVL fatty acid elongase 1 	ENST00000372458.3|ELOVL1|ENSG00000066322.8|ELOVL fatty acid elongase 1
hg19_v2_chr5_-_160973649_160973713	0.0152164	CCACAGG	ENST00000393959.1|GABRB2|ENSG00000145864.8|gamma-aminobutyric acid (GABA) A receptor, beta 2 	ENST00000517547.1|GABRB2|ENSG00000145864.8|gamma-aminobutyric acid (GABA) A receptor, beta 2
hg19_v2_chr7_-_27224795_27224840	0.0145765	CCACAGG	ENST00000006015.3|HOXA11|ENSG00000005073.5|homeobox A11
hg19_v2_chr10_-_126849068_126849138	0.0140755	CCACAGG	ENST00000494626.2|CTBP2|ENSG00000175029.12|C-terminal binding protein 2 	ENST00000337195.5|CTBP2|ENSG00000175029.12|C-terminal binding protein 2
hg19_v2_chr13_+_52158610_52158654	0.0140751	CCACAGG	ENST00000298125.5|WDFY2|ENSG00000139668.7|WD repeat and FYVE domain containing 2
hg19_v2_chrX_+_23352133_23352229	0.0139272	CCACAGG	ENST00000379361.4|PTCHD1|ENSG00000165186.9|patched domain containing 1
hg19_v2_chr1_-_155211017_155211062	0.0139024	CCACAGG	ENST00000536770.1|GBA|ENSG00000177628.11|glucosidase, beta, acid 	ENST00000368373.3|GBA|ENSG00000177628.11|glucosidase, beta, acid
hg19_v2_chr20_+_36322408_36322516	0.0138285	CCACAGG	ENST00000361383.6|CTNNBL1|ENSG00000132792.14|catenin, beta like 1 	ENST00000447935.1|CTNNBL1|ENSG00000132792.14|catenin, beta like 1 	ENST00000405275.2|CTNNBL1|ENSG00000132792.14|catenin, beta like 1
hg19_v2_chr1_+_12290121_12290141	0.0132911	CCACAGG	ENST00000358136.3|VPS13D|ENSG00000048707.9|vacuolar protein sorting 13 homolog D (S. cerevisiae) 	ENST00000356315.4|VPS13D|ENSG00000048707.9|vacuolar protein sorting 13 homolog D (S. cerevisiae)
hg19_v2_chr13_-_72441315_72441454	0.0131771	CCACAGG	ENST00000305425.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000313174.7|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000354591.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila)
hg19_v2_chr2_-_166060571_166060582	0.0130433	CCACAGG	ENST00000360093.3|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr22_+_21271714_21271770	0.0129295	CCACAGG	ENST00000354336.3|CRKL|ENSG00000099942.8|v-crk avian sarcoma virus CT10 oncogene homolog-like
hg19_v2_chr17_-_26733179_26733237	0.0124643	CCACAGG	ENST00000440501.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1 	ENST00000321666.5|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1
hg19_v2_chr17_-_39890893_39890898	0.0124158	CCACAGG	ENST00000393939.2|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000347901.4|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000341193.5|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000310778.5|HAP1|ENSG00000173805.11|huntingtin-associated protein 1
hg19_v2_chr9_-_100684845_100684856	0.0113295	CCACAGG	ENST00000375119.3|C9orf156|ENSG00000136932.9|chromosome 9 open reading frame 156
hg19_v2_chr2_-_40679186_40679297	0.010528	CCACAGG	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr10_-_75634260_75634321	0.0104892	CCACAGG	ENST00000372765.1|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma 	ENST00000351293.3|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma
hg19_v2_chr6_-_34113856_34113868	0.0104599	CCACAGG	ENST00000538487.2|GRM4|ENSG00000124493.9|glutamate receptor, metabotropic 4
hg19_v2_chr17_+_60704762_60704762	0.010376	CCACAGG	ENST00000303375.5|MRC2|ENSG00000011028.9|mannose receptor, C type 2
hg19_v2_chr11_+_35684288_35684353	0.0102522	CCACAGG	ENST00000299413.5|TRIM44|ENSG00000166326.5|tripartite motif containing 44
hg19_v2_chr3_+_45017722_45017772	0.0101746	CCACAGG	ENST00000265564.7|EXOSC7|ENSG00000075914.8|exosome component 7
hg19_v2_chr3_+_51741072_51741106	0.0100309	CCACAGG	ENST00000395052.3|GRM2|ENSG00000164082.10|glutamate receptor, metabotropic 2
hg19_v2_chr1_+_203595903_203595934	0.0100126	CCACAGG	ENST00000367218.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000367219.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000391954.2|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4
hg19_v2_chr9_+_92219919_92219953	0.009668	CCACAGG	ENST00000252506.6|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma 	ENST00000375769.1|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma
hg19_v2_chr15_-_37390482_37390572	0.00960009	CCACAGG	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr1_+_15943995_15944014	0.00943011	CCACAGG	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr4_+_93225550_93225641	0.00929003	CCACAGG	ENST00000282020.4|GRID2|ENSG00000152208.7|glutamate receptor, ionotropic, delta 2
hg19_v2_chr13_+_111365602_111365625	0.00907078	CCACAGG	ENST00000333219.7|ING1|ENSG00000153487.11|inhibitor of growth family, member 1
hg19_v2_chr16_+_23652700_23652713	0.00890799	CCACAGG	ENST00000300087.2|DCTN5|ENSG00000166847.5|dynactin 5 (p25)
hg19_v2_chr19_+_34745442_34745502	0.00875793	CCACAGG	ENST00000299505.6|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588470.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000589583.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588338.2|KIAA0355|ENSG00000166398.8|KIAA0355
hg19_v2_chr14_-_74253948_74253964	0.00857859	CCACAGG	ENST00000394071.2|ELMSAN1|ENSG00000156030.8|ELM2 and Myb/SANT-like domain containing 1
hg19_v2_chr1_-_209979375_209979389	0.00849436	CCACAGG	ENST00000367021.3|IRF6|ENSG00000117595.6|interferon regulatory factor 6
hg19_v2_chr4_+_134070439_134070470	0.00828601	CCACAGG	ENST00000264360.5|PCDH10|ENSG00000138650.7|protocadherin 10
hg19_v2_chr3_+_5020801_5020952	0.00805591	CCACAGG	ENST00000256495.3|BHLHE40|ENSG00000134107.4|basic helix-loop-helix family, member e40
hg19_v2_chr17_+_44928946_44928953	0.00767013	CCACAGG	ENST00000290015.2|WNT9B|ENSG00000158955.6|wingless-type MMTV integration site family, member 9B 	ENST00000393461.2|WNT9B|ENSG00000158955.6|wingless-type MMTV integration site family, member 9B
hg19_v2_chr16_+_68298405_68298463	0.00752867	CCACAGG	ENST00000219343.6|SLC7A6|ENSG00000103064.9|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 	ENST00000566834.1|SLC7A6|ENSG00000103064.9|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 	ENST00000566454.1|SLC7A6|ENSG00000103064.9|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6
hg19_v2_chr1_+_18958008_18958023	0.00747055	CCACAGG	ENST00000420770.2|PAX7|ENSG00000009709.7|paired box 7 	ENST00000400661.3|PAX7|ENSG00000009709.7|paired box 7
hg19_v2_chr7_+_94285637_94285689	0.00746546	CCACAGG	ENST00000482108.1|PEG10|ENSG00000242265.1|paternally expressed 10 	ENST00000488574.1|PEG10|ENSG00000242265.1|paternally expressed 10
hg19_v2_chr16_-_71758602_71758604	0.00744055	CCACAGG	ENST00000568954.1|PHLPP2|ENSG00000040199.14|PH domain and leucine rich repeat protein phosphatase 2
hg19_v2_chr15_-_42264702_42264812	0.00732016	CCACAGG	ENST00000220325.4|EHD4|ENSG00000103966.5|EH-domain containing 4
hg19_v2_chr17_+_61851157_61851244	0.00717615	CCACAGG	ENST00000578681.1|DDX42|ENSG00000198231.8|DEAD (Asp-Glu-Ala-Asp) box helicase 42 	ENST00000583590.1|DDX42|ENSG00000198231.8|DEAD (Asp-Glu-Ala-Asp) box helicase 42
hg19_v2_chr9_-_27529726_27529827	0.00707265	CCACAGG	ENST00000262244.5|MOB3B|ENSG00000120162.9|MOB kinase activator 3B
hg19_v2_chrX_+_106765680_106765680	0.00673009	CCACAGG	ENST00000276185.4|FRMPD3|ENSG00000147234.6|FERM and PDZ domain containing 3
hg19_v2_chr1_+_52870227_52870243	0.00660212	CCACAGG	ENST00000257181.9|PRPF38A|ENSG00000134748.12|pre-mRNA processing factor 38A
hg19_v2_chr17_-_58469474_58469511	0.00658837	CCACAGG	ENST00000300896.4|USP32|ENSG00000170832.8|ubiquitin specific peptidase 32
hg19_v2_chr4_+_15004165_15004298	0.00657059	CCACAGG	ENST00000538197.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000541112.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000442003.2|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2
hg19_v2_chr2_-_2334888_2335053	0.00622331	CCACAGG	ENST00000428368.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like 	ENST00000399161.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like
hg19_v2_chr22_-_42466782_42466856	0.00609459	CCACAGG	ENST00000396398.3|NAGA|ENSG00000198951.7|N-acetylgalactosaminidase, alpha- 	ENST00000403363.1|NAGA|ENSG00000198951.7|N-acetylgalactosaminidase, alpha- 	ENST00000402937.1|NAGA|ENSG00000198951.7|N-acetylgalactosaminidase, alpha-
hg19_v2_chr19_-_14316980_14316999	0.00553733	CCACAGG	ENST00000361434.3|LPHN1|ENSG00000072071.12|latrophilin 1 	ENST00000340736.6|LPHN1|ENSG00000072071.12|latrophilin 1
hg19_v2_chr11_+_48002076_48002132	0.00540928	CCACAGG	ENST00000418331.2|PTPRJ|ENSG00000149177.8|protein tyrosine phosphatase, receptor type, J 	ENST00000440289.2|PTPRJ|ENSG00000149177.8|protein tyrosine phosphatase, receptor type, J
hg19_v2_chr3_-_178790057_178790072	0.00491561	CCACAGG	ENST00000311417.2|ZMAT3|ENSG00000172667.6|zinc finger, matrin-type 3
hg19_v2_chr20_-_60640866_60640901	0.00482077	CCACAGG	ENST00000252996.4|TAF4|ENSG00000130699.12|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
hg19_v2_chr11_+_12695944_12695989	0.00447657	CCACAGG	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr17_+_1958388_1958404	0.00415683	CCACAGG	ENST00000399849.3|HIC1|ENSG00000177374.8|hypermethylated in cancer 1
hg19_v2_chr5_+_102594403_102594445	0.00407775	CCACAGG	ENST00000319933.2|C5orf30|ENSG00000181751.5|chromosome 5 open reading frame 30
hg19_v2_chr19_-_11591848_11591865	0.0040367	CCACAGG	ENST00000359227.3|ELAVL3|ENSG00000196361.5|ELAV like neuron-specific RNA binding protein 3
hg19_v2_chr17_-_61523535_61523559	0.00398966	CCACAGG	ENST00000584031.1|CYB561|ENSG00000008283.11|cytochrome b561 	ENST00000392976.1|CYB561|ENSG00000008283.11|cytochrome b561
hg19_v2_chr3_+_85008089_85008189	0.00398393	CCACAGG	ENST00000383699.3|CADM2|ENSG00000175161.9|cell adhesion molecule 2
hg19_v2_chr7_-_81399438_81399514	0.00357068	CCACAGG	ENST00000222390.5|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr1_-_230561475_230561475	0.00348006	CCACAGG	ENST00000391860.1|PGBD5|ENSG00000177614.5|piggyBac transposable element derived 5
hg19_v2_chr1_+_10271674_10271674	0.00333876	CCACAGG	ENST00000377086.1|KIF1B|ENSG00000054523.12|kinesin family member 1B
hg19_v2_chr13_+_25670268_25670315	0.00315837	CCACAGG	ENST00000281589.3|PABPC3|ENSG00000151846.7|poly(A) binding protein, cytoplasmic 3
hg19_v2_chr3_-_119813264_119813272	0.00291074	CCACAGG	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr2_+_238536207_238536290	0.00284493	CCACAGG	ENST00000308482.9|LRRFIP1|ENSG00000124831.14|leucine rich repeat (in FLII) interacting protein 1
hg19_v2_chr7_-_138666053_138666146	0.00282463	CCACAGG	ENST00000440172.1|KIAA1549|ENSG00000122778.5|KIAA1549 	ENST00000422774.1|KIAA1549|ENSG00000122778.5|KIAA1549
hg19_v2_chr18_+_19749386_19749404	0.00276658	CCACAGG	ENST00000269216.3|GATA6|ENSG00000141448.4|GATA binding protein 6
hg19_v2_chr3_+_14860469_14860469	0.00275137	CCACAGG	ENST00000285046.5|FGD5|ENSG00000154783.6|FYVE, RhoGEF and PH domain containing 5
hg19_v2_chr8_+_102504651_102504683	0.00259228	CCACAGG	ENST00000251808.3|GRHL2|ENSG00000083307.6|grainyhead-like 2 (Drosophila) 	ENST00000521085.1|GRHL2|ENSG00000083307.6|grainyhead-like 2 (Drosophila)
hg19_v2_chr14_-_20020272_20020272	0.00258442	CCACAGG	ENST00000551509.1|POTEM|ENSG00000187537.9|POTE ankyrin domain family, member M
hg19_v2_chr12_+_56367697_56367893	0.00243231	CCACAGG	ENST00000553116.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000360299.5|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000548068.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000549915.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000551459.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000448789.2|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family
hg19_v2_chr17_+_56160768_56160786	0.00241247	CCACAGG	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr14_-_39901618_39901704	0.00238641	CCACAGG	ENST00000554932.1|FBXO33|ENSG00000165355.7|F-box protein 33 	ENST00000298097.7|FBXO33|ENSG00000165355.7|F-box protein 33
hg19_v2_chr20_-_4982132_4982164	0.00223798	CCACAGG	ENST00000338244.1|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2 	ENST00000424750.2|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2
hg19_v2_chr17_+_47865917_47866068	0.00218035	CCACAGG	ENST00000259021.4|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000454930.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000509773.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000510819.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000424009.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7
hg19_v2_chr5_+_112312416_112312440	0.00195257	CCACAGG	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr18_-_31803435_31803515	0.00181221	CCACAGG	ENST00000589544.1|NOL4|ENSG00000101746.11|nucleolar protein 4 	ENST00000269185.4|NOL4|ENSG00000101746.11|nucleolar protein 4 	ENST00000261592.5|NOL4|ENSG00000101746.11|nucleolar protein 4
hg19_v2_chr3_+_5229356_5229367	0.00172981	CCACAGG	ENST00000256497.4|EDEM1|ENSG00000134109.6|ER degradation enhancer, mannosidase alpha-like 1
hg19_v2_chr1_-_26197744_26197744	0.00170262	CCACAGG	ENST00000374296.3|PAQR7|ENSG00000182749.5|progestin and adipoQ receptor family member VII
hg19_v2_chr2_-_232329186_232329305	0.000679157	CCACAGG	ENST00000322723.4|NCL|ENSG00000115053.11|nucleolin
hg19_v2_chr1_+_145524891_145525012	0.000531396	CCACAGG	ENST00000369304.3|ITGA10|ENSG00000143127.8|integrin, alpha 10
hg19_v2_chr16_-_18937726_18937776	0.000515042	CCACAGG	ENST00000389467.3|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase 	ENST00000446231.2|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr17_+_29421900_29421951	0.000372867	CCACAGG	ENST00000358273.4|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000356175.3|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr19_+_19322758_19322782	0.000216394	CCACAGG	ENST00000252575.6|NCAN|ENSG00000130287.9|neurocan
hg19_v2_chr1_-_110284384_110284384	0.000214781	CCACAGG	ENST00000540225.1|GSTM3|ENSG00000134202.6|glutathione S-transferase mu 3 (brain)
hg19_v2_chr1_+_113010056_113010056	0.000141223	CCACAGG	ENST00000369686.5|WNT2B|ENSG00000134245.13|wingless-type MMTV integration site family, member 2B
