hg19_v2_chr11_+_34642656_34642682	0.30561	CACAGUG	ENST00000257831.3|EHF|ENSG00000135373.8|ets homologous factor 	ENST00000450654.2|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr2_+_46926048_46926095	0.232319	CACAGUG	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr12_+_79258547_79258607	0.207955	CACAGUG	ENST00000457153.2|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr17_-_53499310_53499353	0.201986	CACAGUG	ENST00000262065.3|MMD|ENSG00000108960.3|monocyte to macrophage differentiation-associated
hg19_v2_chr4_+_52709229_52709345	0.185333	CACAGUG	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr7_-_92219698_92219713	0.178742	CACAGUG	ENST00000438306.1|FAM133B|ENSG00000234545.3|family with sequence similarity 133, member B 	ENST00000445716.1|FAM133B|ENSG00000234545.3|family with sequence similarity 133, member B
hg19_v2_chr5_+_138678131_138678169	0.174661	CACAGUG	ENST00000394795.2|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000510080.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr19_+_32896697_32896786	0.172041	CACAGUG	ENST00000586987.1|DPY19L3|ENSG00000178904.14|dpy-19-like 3 (C. elegans)
hg19_v2_chr12_-_88974236_88974256	0.171109	CACAGUG	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chr20_+_10199468_10199516	0.168258	CACAGUG	ENST00000254976.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa 	ENST00000304886.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa
hg19_v2_chr12_+_105501487_105501562	0.167698	CACAGUG	ENST00000332180.5|KIAA1033|ENSG00000136051.9|KIAA1033
hg19_v2_chr6_-_166075557_166075588	0.16706	CACAGUG	ENST00000539869.2|PDE10A|ENSG00000112541.9|phosphodiesterase 10A 	ENST00000366882.1|PDE10A|ENSG00000112541.9|phosphodiesterase 10A
hg19_v2_chr1_-_108507631_108507809	0.167006	CACAGUG	ENST00000527011.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000370056.4|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr6_+_126112001_126112062	0.152764	CACAGUG	ENST00000392477.2|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7
hg19_v2_chr14_-_53619816_53620056	0.152392	CACAGUG	ENST00000323669.5|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000395606.1|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000357758.3|DDHD1|ENSG00000100523.10|DDHD domain containing 1
hg19_v2_chr20_-_14318248_14318264	0.147808	CACAGUG	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr15_+_98503922_98503964	0.147016	CACAGUG	ENST00000268042.6|ARRDC4|ENSG00000140450.7|arrestin domain containing 4
hg19_v2_chrX_+_108780062_108780105	0.145768	CACAGUG	ENST00000372106.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr12_-_93835665_93835750	0.143535	CACAGUG	ENST00000552442.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N 	ENST00000550657.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N
hg19_v2_chr11_-_27528301_27528336	0.140456	CACAGUG	ENST00000524596.1|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans) 	ENST00000278193.2|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans)
hg19_v2_chr7_-_139876812_139876860	0.138244	CACAGUG	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr10_-_91403625_91403649	0.137916	CACAGUG	ENST00000322191.6|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000342512.3|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000371774.2|PANK1|ENSG00000152782.12|pantothenate kinase 1
hg19_v2_chr1_-_78148324_78148365	0.137458	CACAGUG	ENST00000370801.3|ZZZ3|ENSG00000036549.8|zinc finger, ZZ-type containing 3 	ENST00000433749.1|ZZZ3|ENSG00000036549.8|zinc finger, ZZ-type containing 3
hg19_v2_chr7_-_30066233_30066332	0.137106	CACAGUG	ENST00000222803.5|FKBP14|ENSG00000106080.6|FK506 binding protein 14, 22 kDa
hg19_v2_chr15_+_52311398_52311461	0.136276	CACAGUG	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr1_-_68299130_68299160	0.136008	CACAGUG	ENST00000370982.3|GNG12|ENSG00000172380.5|guanine nucleotide binding protein (G protein), gamma 12
hg19_v2_chr18_-_268019_268064	0.135819	CACAGUG	ENST00000261600.6|THOC1|ENSG00000079134.7|THO complex 1
hg19_v2_chr1_-_184723942_184724047	0.134667	CACAGUG	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr10_+_112679301_112679346	0.133977	CACAGUG	ENST00000265277.5|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans) 	ENST00000369452.4|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans)
hg19_v2_chr4_+_6784401_6784510	0.132029	CACAGUG	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr5_-_57756087_57756087	0.130068	CACAGUG	ENST00000274289.3|PLK2|ENSG00000145632.10|polo-like kinase 2
hg19_v2_chr4_+_174089904_174089921	0.129228	CACAGUG	ENST00000265000.4|GALNT7|ENSG00000109586.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)
hg19_v2_chr16_+_69599861_69599887	0.128947	CACAGUG	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr2_-_164592497_164592573	0.127069	CACAGUG	ENST00000333129.3|FIGN|ENSG00000182263.9|fidgetin 	ENST00000409634.1|FIGN|ENSG00000182263.9|fidgetin
hg19_v2_chr3_-_182698381_182698431	0.126617	CACAGUG	ENST00000292782.4|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr11_-_102323489_102323576	0.126599	CACAGUG	ENST00000361236.3|TMEM123|ENSG00000152558.10|transmembrane protein 123
hg19_v2_chr13_+_33160553_33160564	0.126006	CACAGUG	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr6_+_80341000_80341025	0.124357	CACAGUG	ENST00000369838.4|SH3BGRL2|ENSG00000198478.6|SH3 domain binding glutamic acid-rich protein like 2
hg19_v2_chr8_-_74791051_74791145	0.124343	CACAGUG	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr8_-_124286735_124286773	0.123795	CACAGUG	ENST00000395571.3|ZHX1|ENSG00000165156.10|zinc fingers and homeoboxes 1
hg19_v2_chr12_+_20522179_20522203	0.123499	CACAGUG	ENST00000359062.3|PDE3A|ENSG00000172572.6|phosphodiesterase 3A, cGMP-inhibited
hg19_v2_chr14_+_56585048_56585150	0.123227	CACAGUG	ENST00000267460.4|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chr2_-_69614373_69614397	0.122961	CACAGUG	ENST00000361060.5|GFPT1|ENSG00000198380.8|glutamine--fructose-6-phosphate transaminase 1 	ENST00000357308.4|GFPT1|ENSG00000198380.8|glutamine--fructose-6-phosphate transaminase 1
hg19_v2_chr7_+_116312411_116312502	0.121751	CACAGUG	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr8_+_40010989_40011008	0.12151	CACAGUG	ENST00000315792.3|C8orf4|ENSG00000176907.3|chromosome 8 open reading frame 4
hg19_v2_chr12_-_31945172_31945178	0.121167	CACAGUG	ENST00000340398.3|H3F3C|ENSG00000188375.3|H3 histone, family 3C
hg19_v2_chr5_-_82373260_82373315	0.120926	CACAGUG	ENST00000502346.1|TMEM167A|ENSG00000174695.5|transmembrane protein 167A
hg19_v2_chr2_-_206950781_206950947	0.12023	CACAGUG	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr6_+_13925098_13925163	0.11923	CACAGUG	ENST00000488300.1|RNF182|ENSG00000180537.8|ring finger protein 182 	ENST00000544682.1|RNF182|ENSG00000180537.8|ring finger protein 182 	ENST00000420478.2|RNF182|ENSG00000180537.8|ring finger protein 182
hg19_v2_chr21_+_35445827_35445886	0.118869	CACAGUG	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chrX_+_117629766_117629872	0.1179	CACAGUG	ENST00000276204.6|DOCK11|ENSG00000147251.11|dedicator of cytokinesis 11 	ENST00000276202.7|DOCK11|ENSG00000147251.11|dedicator of cytokinesis 11
hg19_v2_chr1_+_113161778_113161820	0.117571	CACAGUG	ENST00000263168.3|CAPZA1|ENSG00000116489.8|capping protein (actin filament) muscle Z-line, alpha 1
hg19_v2_chr4_-_177713788_177713881	0.117433	CACAGUG	ENST00000280193.2|VEGFC|ENSG00000150630.2|vascular endothelial growth factor C
hg19_v2_chr1_+_193028552_193028589	0.117131	CACAGUG	ENST00000400968.2|TROVE2|ENSG00000116747.8|TROVE domain family, member 2 	ENST00000432079.1|TROVE2|ENSG00000116747.8|TROVE domain family, member 2
hg19_v2_chr10_+_70320413_70320413	0.117109	CACAGUG	ENST00000373644.4|TET1|ENSG00000138336.8|tet methylcytosine dioxygenase 1
hg19_v2_chr12_+_67663056_67663067	0.11679	CACAGUG	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr1_+_76540386_76540445	0.116424	CACAGUG	ENST00000328299.3|ST6GALNAC3|ENSG00000184005.9|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg19_v2_chr18_+_67956135_67956144	0.115168	CACAGUG	ENST00000397942.3|SOCS6|ENSG00000170677.5|suppressor of cytokine signaling 6
hg19_v2_chr2_-_39348137_39348212	0.11386	CACAGUG	ENST00000426016.1|SOS1|ENSG00000115904.8|son of sevenless homolog 1 (Drosophila)
hg19_v2_chr22_+_46067678_46067771	0.113258	CACAGUG	ENST00000381061.4|ATXN10|ENSG00000130638.11|ataxin 10 	ENST00000252934.5|ATXN10|ENSG00000130638.11|ataxin 10
hg19_v2_chr5_+_52285144_52285166	0.111164	CACAGUG	ENST00000296585.5|ITGA2|ENSG00000164171.6|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
hg19_v2_chr16_-_18937726_18937776	0.110102	CACAGUG	ENST00000389467.3|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase 	ENST00000446231.2|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr14_-_59932044_59932114	0.10973	CACAGUG	ENST00000395116.1|GPR135|ENSG00000181619.11|G protein-coupled receptor 135
hg19_v2_chr4_+_71768043_71768095	0.109016	CACAGUG	ENST00000502869.1|MOB1B|ENSG00000173542.4|MOB kinase activator 1B 	ENST00000309395.2|MOB1B|ENSG00000173542.4|MOB kinase activator 1B 	ENST00000396051.2|MOB1B|ENSG00000173542.4|MOB kinase activator 1B
hg19_v2_chr2_+_201676256_201676323	0.108816	CACAGUG	ENST00000452206.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000410110.2|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000409600.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1
hg19_v2_chr1_+_205473720_205473732	0.10752	CACAGUG	ENST00000429964.2|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18 	ENST00000506784.1|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18 	ENST00000360066.2|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18
hg19_v2_chr1_+_35734562_35734573	0.106615	CACAGUG	ENST00000314607.6|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4 	ENST00000373297.2|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4
hg19_v2_chr5_+_162864575_162864620	0.106463	CACAGUG	ENST00000512163.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000393929.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000340828.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511683.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510097.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511490.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510664.1|CCNG1|ENSG00000113328.14|cyclin G1
hg19_v2_chr7_-_27239703_27239725	0.105744	CACAGUG	ENST00000222753.4|HOXA13|ENSG00000106031.6|homeobox A13
hg19_v2_chr5_-_111754948_111755013	0.105249	CACAGUG	ENST00000261486.5|EPB41L4A|ENSG00000129595.8|erythrocyte membrane protein band 4.1 like 4A
hg19_v2_chr1_+_162531294_162531332	0.104546	CACAGUG	ENST00000367926.4|UAP1|ENSG00000117143.9|UDP-N-acteylglucosamine pyrophosphorylase 1 	ENST00000271469.3|UAP1|ENSG00000117143.9|UDP-N-acteylglucosamine pyrophosphorylase 1
hg19_v2_chr12_-_90049828_90049847	0.104495	CACAGUG	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr17_+_12569306_12569344	0.104287	CACAGUG	ENST00000425538.1|MYOCD|ENSG00000141052.13|myocardin
hg19_v2_chr6_-_119399895_119399915	0.103595	CACAGUG	ENST00000338891.7|FAM184A|ENSG00000111879.14|family with sequence similarity 184, member A
hg19_v2_chr5_-_38595498_38595514	0.101876	CACAGUG	ENST00000263409.4|LIFR|ENSG00000113594.5|leukemia inhibitory factor receptor alpha
hg19_v2_chr5_-_56247935_56247959	0.101783	CACAGUG	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr5_+_109025067_109025146	0.101224	CACAGUG	ENST00000261483.4|MAN2A1|ENSG00000112893.5|mannosidase, alpha, class 2A, member 1
hg19_v2_chrX_-_3631635_3631698	0.100705	CACAGUG	ENST00000262848.5|PRKX|ENSG00000183943.5|protein kinase, X-linked
hg19_v2_chr7_-_27183263_27183287	0.10038	CACAGUG	ENST00000222726.3|HOXA5|ENSG00000106004.4|homeobox A5
hg19_v2_chr1_-_205326022_205326074	0.100153	CACAGUG	ENST00000367155.3|KLHDC8A|ENSG00000162873.10|kelch domain containing 8A
hg19_v2_chr15_+_81071684_81071719	0.10009	CACAGUG	ENST00000220244.3|KIAA1199|ENSG00000103888.11|KIAA1199 	ENST00000394685.3|KIAA1199|ENSG00000103888.11|KIAA1199 	ENST00000356249.5|KIAA1199|ENSG00000103888.11|KIAA1199
hg19_v2_chr5_-_111093406_111093458	0.0990934	CACAGUG	ENST00000379671.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr6_-_8064567_8064652	0.0989626	CACAGUG	ENST00000543936.1|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted 	ENST00000397457.2|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted
hg19_v2_chr1_+_39456895_39456986	0.0988042	CACAGUG	ENST00000432648.3|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000446189.2|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000372984.4|AKIRIN1|ENSG00000174574.11|akirin 1
hg19_v2_chr10_+_22610124_22610188	0.0987676	CACAGUG	ENST00000376663.3|BMI1|ENSG00000168283.9|BMI1 polycomb ring finger oncogene
hg19_v2_chr11_+_109964087_109964123	0.0987154	CACAGUG	ENST00000278590.3|ZC3H12C|ENSG00000149289.6|zinc finger CCCH-type containing 12C
hg19_v2_chr4_-_111119804_111119832	0.0981686	CACAGUG	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr6_+_47445467_47445536	0.0980213	CACAGUG	ENST00000359314.5|CD2AP|ENSG00000198087.7|CD2-associated protein
hg19_v2_chr14_-_31676964_31677017	0.0975857	CACAGUG	ENST00000553700.1|HECTD1|ENSG00000092148.8|HECT domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr20_-_32700075_32700138	0.0971666	CACAGUG	ENST00000374980.2|EIF2S2|ENSG00000125977.6|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa
hg19_v2_chr2_+_157291953_157292003	0.0967862	CACAGUG	ENST00000310454.6|GPD2|ENSG00000115159.11|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg19_v2_chr8_-_12612962_12613049	0.0965824	CACAGUG	ENST00000398246.3|LONRF1|ENSG00000154359.8|LON peptidase N-terminal domain and ring finger 1
hg19_v2_chr3_+_119187785_119187863	0.0959829	CACAGUG	ENST00000295588.4|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1 	ENST00000476573.1|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1
hg19_v2_chr15_-_43398274_43398318	0.0949672	CACAGUG	ENST00000382177.2|UBR1|ENSG00000159459.7|ubiquitin protein ligase E3 component n-recognin 1 	ENST00000290650.4|UBR1|ENSG00000159459.7|ubiquitin protein ligase E3 component n-recognin 1
hg19_v2_chr5_+_65018017_65018088	0.0949177	CACAGUG	ENST00000380985.5|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family) 	ENST00000502464.1|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family)
hg19_v2_chr1_+_184356188_184356200	0.0948768	CACAGUG	ENST00000235307.6|C1orf21|ENSG00000116667.8|chromosome 1 open reading frame 21
hg19_v2_chr9_+_114659046_114659102	0.0942211	CACAGUG	ENST00000374279.3|UGCG|ENSG00000148154.5|UDP-glucose ceramide glucosyltransferase
hg19_v2_chr1_+_24286287_24286326	0.0939908	CACAGUG	ENST00000334351.7|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2 	ENST00000374468.1|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2
hg19_v2_chr17_+_30264014_30264086	0.0928422	CACAGUG	ENST00000322652.5|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit 	ENST00000580398.1|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit
hg19_v2_chr8_-_91658303_91658327	0.0925839	CACAGUG	ENST00000458549.2|TMEM64|ENSG00000180694.9|transmembrane protein 64
hg19_v2_chr17_+_29421900_29421951	0.0922747	CACAGUG	ENST00000358273.4|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000356175.3|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr4_+_140222609_140222742	0.0919013	CACAGUG	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr11_-_74109422_74109518	0.0902575	CACAGUG	ENST00000298198.4|PGM2L1|ENSG00000165434.6|phosphoglucomutase 2-like 1
hg19_v2_chr13_-_111214015_111214080	0.0899329	CACAGUG	ENST00000267328.3|RAB20|ENSG00000139832.3|RAB20, member RAS oncogene family
hg19_v2_chr4_+_140374961_140375016	0.0898247	CACAGUG	ENST00000305626.5|RAB33B|ENSG00000172007.5|RAB33B, member RAS oncogene family
hg19_v2_chr2_+_43864387_43864472	0.0894312	CACAGUG	ENST00000282406.4|PLEKHH2|ENSG00000152527.9|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
hg19_v2_chr3_-_113465065_113465147	0.0880179	CACAGUG	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr6_+_142622991_142623004	0.0873053	CACAGUG	ENST00000230173.6|GPR126|ENSG00000112414.10|G protein-coupled receptor 126 	ENST00000367608.2|GPR126|ENSG00000112414.10|G protein-coupled receptor 126
hg19_v2_chr5_+_65440032_65440099	0.0872909	CACAGUG	ENST00000334121.6|SREK1|ENSG00000153914.11|splicing regulatory glutamine/lysine-rich protein 1
hg19_v2_chr2_-_71454185_71454242	0.0872085	CACAGUG	ENST00000244221.8|PAIP2B|ENSG00000124374.8|poly(A) binding protein interacting protein 2B
hg19_v2_chr2_+_232260254_232260274	0.0870623	CACAGUG	ENST00000287590.5|B3GNT7|ENSG00000156966.6|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
hg19_v2_chr5_-_132299313_132299334	0.0868418	CACAGUG	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr2_-_9143786_9143942	0.0866064	CACAGUG	ENST00000462696.1|MBOAT2|ENSG00000143797.7|membrane bound O-acyltransferase domain containing 2 	ENST00000305997.3|MBOAT2|ENSG00000143797.7|membrane bound O-acyltransferase domain containing 2
hg19_v2_chrX_+_16804544_16804613	0.0862729	CACAGUG	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr10_-_65225722_65225755	0.0858139	CACAGUG	ENST00000399251.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr7_+_24612935_24612980	0.0855635	CACAGUG	ENST00000222644.5|MPP6|ENSG00000105926.11|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
hg19_v2_chr17_+_28705921_28706000	0.0845541	CACAGUG	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr10_+_98592009_98592061	0.0844819	CACAGUG	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr3_+_132136331_132136378	0.0842043	CACAGUG	ENST00000260818.6|DNAJC13|ENSG00000138246.11|DnaJ (Hsp40) homolog, subfamily C, member 13
hg19_v2_chr17_+_47572647_47572662	0.0840538	CACAGUG	ENST00000172229.3|NGFR|ENSG00000064300.4|nerve growth factor receptor
hg19_v2_chr12_+_32112340_32112358	0.0827024	CACAGUG	ENST00000540924.1|KIAA1551|ENSG00000174718.7|KIAA1551 	ENST00000312561.4|KIAA1551|ENSG00000174718.7|KIAA1551
hg19_v2_chr1_+_204494618_204494676	0.0823686	CACAGUG	ENST00000367180.1|MDM4|ENSG00000198625.8|Mdm4 p53 binding protein homolog (mouse) 	ENST00000391947.2|MDM4|ENSG00000198625.8|Mdm4 p53 binding protein homolog (mouse)
hg19_v2_chr10_-_71930222_71930280	0.0818542	CACAGUG	ENST00000458634.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373239.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373242.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373241.4|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae)
hg19_v2_chr8_-_91997427_91997504	0.0817407	CACAGUG	ENST00000517562.2|RP11-122A3.2|ENSG00000253250.2|chromosome 8 open reading frame 88
hg19_v2_chr2_+_108443388_108443393	0.0814051	CACAGUG	ENST00000354986.4|RGPD4|ENSG00000196862.8|RANBP2-like and GRIP domain containing 4 	ENST00000408999.3|RGPD4|ENSG00000196862.8|RANBP2-like and GRIP domain containing 4
hg19_v2_chr13_-_50367057_50367142	0.0805921	CACAGUG	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr1_-_113498943_113498980	0.0805829	CACAGUG	ENST00000369626.3|SLC16A1|ENSG00000155380.7|solute carrier family 16 (monocarboxylate transporter), member 1
hg19_v2_chr12_+_83080659_83080693	0.0803278	CACAGUG	ENST00000321196.3|TMTC2|ENSG00000179104.4|transmembrane and tetratricopeptide repeat containing 2
hg19_v2_chr3_+_141205852_141205929	0.0794554	CACAGUG	ENST00000286364.3|RASA2|ENSG00000155903.7|RAS p21 protein activator 2 	ENST00000452898.1|RASA2|ENSG00000155903.7|RAS p21 protein activator 2
hg19_v2_chr22_+_41956767_41956852	0.0793642	CACAGUG	ENST00000306149.7|CSDC2|ENSG00000172346.10|cold shock domain containing C2, RNA binding
hg19_v2_chr3_+_23986748_23986761	0.078792	CACAGUG	ENST00000312521.4|NR1D2|ENSG00000174738.8|nuclear receptor subfamily 1, group D, member 2
hg19_v2_chr14_-_50999307_50999367	0.0777062	CACAGUG	ENST00000013125.4|MAP4K5|ENSG00000012983.7|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v2_chr8_-_103425047_103425069	0.0774925	CACAGUG	ENST00000520539.1|UBR5|ENSG00000104517.8|ubiquitin protein ligase E3 component n-recognin 5
hg19_v2_chr2_+_170440844_170440897	0.0755146	CACAGUG	ENST00000260970.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000433207.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000409714.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000462903.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G)
hg19_v2_chr1_+_65613217_65613331	0.0753067	CACAGUG	ENST00000545314.1|AK4|ENSG00000162433.10|adenylate kinase 4
hg19_v2_chr2_+_203879568_203879611	0.0751297	CACAGUG	ENST00000449802.1|NBEAL1|ENSG00000144426.14|neurobeachin-like 1
hg19_v2_chr15_-_56209306_56209344	0.0750978	CACAGUG	ENST00000506154.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000338963.2|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000508342.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
hg19_v2_chr2_-_54087066_54087297	0.0743793	CACAGUG	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr18_-_45456930_45456970	0.0742822	CACAGUG	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr12_-_54673871_54673925	0.0741181	CACAGUG	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr17_+_45608430_45608490	0.0740618	CACAGUG	ENST00000322157.4|NPEPPS|ENSG00000141279.11|aminopeptidase puromycin sensitive
hg19_v2_chr17_-_60142609_60142657	0.0734958	CACAGUG	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr18_-_29522989_29523104	0.0734205	CACAGUG	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr6_+_105404899_105404931	0.0733762	CACAGUG	ENST00000345080.4|LIN28B|ENSG00000187772.6|lin-28 homolog B (C. elegans)
hg19_v2_chr6_-_89673280_89673349	0.0727846	CACAGUG	ENST00000369475.3|RNGTT|ENSG00000111880.11|RNA guanylyltransferase and 5'-phosphatase 	ENST00000369485.4|RNGTT|ENSG00000111880.11|RNA guanylyltransferase and 5'-phosphatase 	ENST00000538899.1|RNGTT|ENSG00000111880.11|RNA guanylyltransferase and 5'-phosphatase 	ENST00000265607.6|RNGTT|ENSG00000111880.11|RNA guanylyltransferase and 5'-phosphatase
hg19_v2_chr12_-_105478339_105478361	0.0725633	CACAGUG	ENST00000424857.2|ALDH1L2|ENSG00000136010.9|aldehyde dehydrogenase 1 family, member L2 	ENST00000258494.9|ALDH1L2|ENSG00000136010.9|aldehyde dehydrogenase 1 family, member L2
hg19_v2_chr1_+_15943995_15944014	0.0724693	CACAGUG	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr14_-_64194745_64194799	0.0723991	CACAGUG	ENST00000247225.6|SGPP1|ENSG00000126821.7|sphingosine-1-phosphate phosphatase 1
hg19_v2_chr10_+_60094735_60094749	0.0719741	CACAGUG	ENST00000373910.4|UBE2D1|ENSG00000072401.10|ubiquitin-conjugating enzyme E2D 1
hg19_v2_chr14_+_71374122_71374193	0.07169	CACAGUG	ENST00000304743.2|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila) 	ENST00000238570.5|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila)
hg19_v2_chr2_+_238875597_238875724	0.0712251	CACAGUG	ENST00000272930.4|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000448502.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000416292.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000409633.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000414443.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000409953.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000409332.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative)
hg19_v2_chr6_+_127439749_127439829	0.0708747	CACAGUG	ENST00000356698.4|RSPO3|ENSG00000146374.9|R-spondin 3
hg19_v2_chr3_+_23244780_23244837	0.0701875	CACAGUG	ENST00000396703.1|UBE2E2|ENSG00000182247.5|ubiquitin-conjugating enzyme E2E 2
hg19_v2_chr3_+_155588300_155588369	0.0699517	CACAGUG	ENST00000496455.2|GMPS|ENSG00000163655.11|guanine monphosphate synthase
hg19_v2_chr6_+_149068464_149068559	0.0698405	CACAGUG	ENST00000367463.4|UST|ENSG00000111962.7|uronyl-2-sulfotransferase
hg19_v2_chr9_+_103204553_103204560	0.0697478	CACAGUG	ENST00000502978.1|MSANTD3-TMEFF1|ENSG00000251349.3|MSANTD3-TMEFF1 readthrough 	ENST00000334943.6|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr17_-_3461092_3461126	0.0689778	CACAGUG	ENST00000301365.4|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3 	ENST00000572519.1|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3
hg19_v2_chr1_+_199996702_199996732	0.0688935	CACAGUG	ENST00000367362.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr11_+_9406169_9406210	0.0676004	CACAGUG	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr7_-_112579869_112579971	0.0673957	CACAGUG	ENST00000297145.4|C7orf60|ENSG00000164603.7|chromosome 7 open reading frame 60
hg19_v2_chr8_-_42698433_42698486	0.0669591	CACAGUG	ENST00000345117.2|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1 	ENST00000254250.3|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1
hg19_v2_chr8_-_17104356_17104395	0.0666704	CACAGUG	ENST00000361272.4|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7 	ENST00000523917.1|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7
hg19_v2_chr12_-_26278030_26278060	0.0663658	CACAGUG	ENST00000242728.4|BHLHE41|ENSG00000123095.5|basic helix-loop-helix family, member e41
hg19_v2_chr1_+_54519242_54519317	0.0663163	CACAGUG	ENST00000234827.1|TCEANC2|ENSG00000116205.6|transcription elongation factor A (SII) N-terminal and central domain containing 2
hg19_v2_chr14_-_91526922_91527001	0.06583	CACAGUG	ENST00000418736.2|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5 	ENST00000261991.3|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5
hg19_v2_chr2_+_139259324_139259389	0.0655757	CACAGUG	ENST00000280098.4|SPOPL|ENSG00000144228.4|speckle-type POZ protein-like
hg19_v2_chr3_+_107241783_107241850	0.0653668	CACAGUG	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr14_+_57735614_57735629	0.0647285	CACAGUG	ENST00000261558.3|AP5M1|ENSG00000053770.7|adaptor-related protein complex 5, mu 1 subunit
hg19_v2_chr2_-_160472952_160473080	0.0646725	CACAGUG	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr17_+_56833184_56833249	0.0645666	CACAGUG	ENST00000308249.2|PPM1E|ENSG00000175175.4|protein phosphatase, Mg2+/Mn2+ dependent, 1E
hg19_v2_chr17_-_49337392_49337465	0.0623173	CACAGUG	ENST00000376381.2|MBTD1|ENSG00000011258.11|mbt domain containing 1 	ENST00000586178.1|MBTD1|ENSG00000011258.11|mbt domain containing 1
hg19_v2_chr12_-_42538657_42538720	0.0621155	CACAGUG	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr11_-_118661828_118661886	0.0619544	CACAGUG	ENST00000264018.4|DDX6|ENSG00000110367.7|DEAD (Asp-Glu-Ala-Asp) box helicase 6
hg19_v2_chr9_-_102861267_102861322	0.0617828	CACAGUG	ENST00000262455.6|ERP44|ENSG00000023318.7|endoplasmic reticulum protein 44
hg19_v2_chr5_-_132073210_132073330	0.0616043	CACAGUG	ENST00000378735.1|KIF3A|ENSG00000131437.11|kinesin family member 3A 	ENST00000378746.4|KIF3A|ENSG00000131437.11|kinesin family member 3A
hg19_v2_chr17_-_62658186_62658231	0.0608149	CACAGUG	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr10_+_64893039_64893128	0.0604239	CACAGUG	ENST00000277746.6|NRBF2|ENSG00000148572.10|nuclear receptor binding factor 2 	ENST00000435510.2|NRBF2|ENSG00000148572.10|nuclear receptor binding factor 2
hg19_v2_chr9_+_101867359_101867376	0.0604129	CACAGUG	ENST00000374994.4|TGFBR1|ENSG00000106799.8|transforming growth factor, beta receptor 1
hg19_v2_chr1_-_93645818_93645918	0.0593911	CACAGUG	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr9_-_36400213_36400296	0.0590418	CACAGUG	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr17_-_63052929_63052962	0.059034	CACAGUG	ENST00000439174.2|GNA13|ENSG00000120063.5|guanine nucleotide binding protein (G protein), alpha 13
hg19_v2_chr8_-_68255912_68255952	0.0588941	CACAGUG	ENST00000262215.3|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) 	ENST00000519436.1|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
hg19_v2_chr4_+_56815102_56815147	0.058261	CACAGUG	ENST00000257287.4|CEP135|ENSG00000174799.6|centrosomal protein 135kDa
hg19_v2_chr1_+_145438469_145438501	0.0581425	CACAGUG	ENST00000369317.4|TXNIP|ENSG00000117289.7|thioredoxin interacting protein
hg19_v2_chr2_-_11606275_11606289	0.0580832	CACAGUG	ENST00000381525.3|E2F6|ENSG00000169016.12|E2F transcription factor 6 	ENST00000362009.4|E2F6|ENSG00000169016.12|E2F transcription factor 6
hg19_v2_chr12_-_12419703_12419811	0.0580267	CACAGUG	ENST00000543091.1|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6 	ENST00000261349.4|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6
hg19_v2_chr8_+_132916318_132916401	0.0579718	CACAGUG	ENST00000254624.5|EFR3A|ENSG00000132294.9|EFR3 homolog A (S. cerevisiae) 	ENST00000522709.1|EFR3A|ENSG00000132294.9|EFR3 homolog A (S. cerevisiae)
hg19_v2_chr20_+_47662805_47662907	0.056955	CACAGUG	ENST00000262982.2|CSE1L|ENSG00000124207.12|CSE1 chromosome segregation 1-like (yeast) 	ENST00000542325.1|CSE1L|ENSG00000124207.12|CSE1 chromosome segregation 1-like (yeast)
hg19_v2_chr6_+_111195973_111195994	0.0566925	CACAGUG	ENST00000368885.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368882.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000451850.2|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368877.5|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1
hg19_v2_chr8_-_127570603_127570648	0.0565719	CACAGUG	ENST00000304916.3|FAM84B|ENSG00000168672.3|family with sequence similarity 84, member B
hg19_v2_chr3_-_136471204_136471249	0.0559952	CACAGUG	ENST00000480733.1|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000383202.2|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000236698.5|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000434713.2|STAG1|ENSG00000118007.8|stromal antigen 1
hg19_v2_chr12_+_69004619_69004699	0.055583	CACAGUG	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chr15_+_44719394_44719579	0.0554906	CACAGUG	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr12_-_95611149_95611249	0.0552924	CACAGUG	ENST00000549499.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000343958.4|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000546711.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6
hg19_v2_chr1_+_180601139_180601180	0.0551597	CACAGUG	ENST00000367590.4|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1 	ENST00000367589.3|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1
hg19_v2_chr15_+_68570062_68570147	0.0545896	CACAGUG	ENST00000306917.4|FEM1B|ENSG00000169018.5|fem-1 homolog b (C. elegans)
hg19_v2_chr2_-_24583168_24583179	0.0544122	CACAGUG	ENST00000361999.3|ITSN2|ENSG00000198399.10|intersectin 2
hg19_v2_chr17_-_58603568_58603610	0.0534216	CACAGUG	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr10_-_121356007_121356147	0.0526764	CACAGUG	ENST00000369093.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1 	ENST00000436547.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1
hg19_v2_chr3_-_129407535_129407575	0.0526298	CACAGUG	ENST00000432054.2|TMCC1|ENSG00000172765.12|transmembrane and coiled-coil domain family 1
hg19_v2_chr6_+_1312675_1312701	0.051944	CACAGUG	ENST00000296839.2|FOXQ1|ENSG00000164379.4|forkhead box Q1
hg19_v2_chr6_+_117996621_117996665	0.051886	CACAGUG	ENST00000368494.3|NUS1|ENSG00000153989.7|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
hg19_v2_chr7_+_77325738_77325789	0.0517831	CACAGUG	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chr10_+_60272814_60272900	0.0516902	CACAGUG	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr2_+_208394616_208394655	0.0511233	CACAGUG	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chrX_+_142967173_142967173	0.050855	CACAGUG	ENST00000370494.1|UBE2NL|ENSG00000102069.3|ubiquitin-conjugating enzyme E2N-like
hg19_v2_chr5_-_59995921_59996000	0.0507353	CACAGUG	ENST00000453022.2|DEPDC1B|ENSG00000035499.8|DEP domain containing 1B 	ENST00000545085.1|DEPDC1B|ENSG00000035499.8|DEP domain containing 1B 	ENST00000265036.5|DEPDC1B|ENSG00000035499.8|DEP domain containing 1B
hg19_v2_chr12_+_113495492_113495503	0.0507275	CACAGUG	ENST00000257600.3|DTX1|ENSG00000135144.3|deltex homolog 1 (Drosophila)
hg19_v2_chr3_+_73045936_73046128	0.0502802	CACAGUG	ENST00000356692.5|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000488810.1|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000394284.3|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000295862.9|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000495566.1|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2
hg19_v2_chr3_+_15247686_15247784	0.0502475	CACAGUG	ENST00000253693.2|CAPN7|ENSG00000131375.5|calpain 7
hg19_v2_chr8_-_41166953_41167016	0.0498447	CACAGUG	ENST00000220772.3|SFRP1|ENSG00000104332.7|secreted frizzled-related protein 1
hg19_v2_chr8_+_1922024_1922069	0.0496734	CACAGUG	ENST00000320248.3|KBTBD11|ENSG00000176595.3|kelch repeat and BTB (POZ) domain containing 11
hg19_v2_chr12_-_124457371_124457387	0.0495997	CACAGUG	ENST00000238156.3|CCDC92|ENSG00000119242.4|coiled-coil domain containing 92 	ENST00000545037.1|CCDC92|ENSG00000119242.4|coiled-coil domain containing 92
hg19_v2_chr1_-_149889382_149889434	0.0493482	CACAGUG	ENST00000369145.1|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A 	ENST00000369146.3|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A
hg19_v2_chr1_-_86043921_86043937	0.0492126	CACAGUG	ENST00000535924.2|DDAH1|ENSG00000153904.14|dimethylarginine dimethylaminohydrolase 1
hg19_v2_chr4_+_79697495_79697538	0.0485297	CACAGUG	ENST00000502871.1|BMP2K|ENSG00000138756.13|BMP2 inducible kinase 	ENST00000335016.5|BMP2K|ENSG00000138756.13|BMP2 inducible kinase
hg19_v2_chr4_-_139163491_139163510	0.0482762	CACAGUG	ENST00000280612.5|SLC7A11|ENSG00000151012.9|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
hg19_v2_chr7_-_103848405_103848495	0.0478352	CACAGUG	ENST00000447452.2|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5 	ENST00000545943.1|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5 	ENST00000297431.4|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5
hg19_v2_chr16_+_66400533_66400545	0.047614	CACAGUG	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr20_-_20693131_20693268	0.0473985	CACAGUG	ENST00000202677.7|RALGAPA2|ENSG00000188559.9|Ral GTPase activating protein, alpha subunit 2 (catalytic)
hg19_v2_chr2_+_238536207_238536290	0.0470473	CACAGUG	ENST00000308482.9|LRRFIP1|ENSG00000124831.14|leucine rich repeat (in FLII) interacting protein 1
hg19_v2_chr2_-_109605663_109605828	0.0468552	CACAGUG	ENST00000409271.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000258443.2|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000376651.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor
hg19_v2_chr10_+_94050913_94050965	0.0468538	CACAGUG	ENST00000358935.2|MARCH5|ENSG00000198060.5|membrane-associated ring finger (C3HC4) 5
hg19_v2_chr15_+_84904525_84904525	0.0464908	CACAGUG	ENST00000510439.2|GOLGA6L4|ENSG00000184206.7|golgin A6 family-like 4
hg19_v2_chr7_-_27219632_27219660	0.0463596	CACAGUG	ENST00000470747.4|RP1-170O19.20|ENSG00000257184.2|Uncharacterized protein
hg19_v2_chr3_-_139195350_139195370	0.0459353	CACAGUG	ENST00000232217.2|RBP2|ENSG00000114113.2|retinol binding protein 2, cellular
hg19_v2_chr7_+_138916231_138916231	0.0458732	CACAGUG	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr8_+_16884740_16884804	0.0458333	CACAGUG	ENST00000318063.5|MICU3|ENSG00000155970.7|mitochondrial calcium uptake family, member 3
hg19_v2_chr16_+_66878814_66878843	0.0458034	CACAGUG	ENST00000394069.3|CA7|ENSG00000168748.9|carbonic anhydrase VII
hg19_v2_chr3_+_16926441_16926463	0.0457878	CACAGUG	ENST00000418129.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2 	ENST00000396755.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2
hg19_v2_chr17_-_71088797_71088851	0.0457046	CACAGUG	ENST00000580557.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000579732.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000578620.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000542342.2|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000255559.3|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000579018.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11
hg19_v2_chr19_+_45251804_45251840	0.0456397	CACAGUG	ENST00000164227.5|BCL3|ENSG00000069399.8|B-cell CLL/lymphoma 3
hg19_v2_chr17_-_35969409_35969544	0.0452912	CACAGUG	ENST00000394378.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585472.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000591288.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000502449.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000345615.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000346661.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585689.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000339208.6|SYNRG|ENSG00000006114.11|synergin, gamma
hg19_v2_chr5_+_172483347_172483407	0.045228	CACAGUG	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chrX_+_17393543_17393543	0.0445645	CACAGUG	ENST00000380060.3|NHS|ENSG00000188158.10|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg19_v2_chr13_-_67804445_67804475	0.0441484	CACAGUG	ENST00000456367.1|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000377861.3|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000544246.1|PCDH9|ENSG00000184226.10|protocadherin 9
hg19_v2_chr5_-_124080203_124080258	0.0435153	CACAGUG	ENST00000504926.1|ZNF608|ENSG00000168916.11|zinc finger protein 608
hg19_v2_chr4_+_38665810_38665827	0.0432305	CACAGUG	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr5_+_52856456_52856505	0.0422101	CACAGUG	ENST00000296684.5|NDUFS4|ENSG00000164258.7|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) 	ENST00000506765.1|NDUFS4|ENSG00000164258.7|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)
hg19_v2_chr15_+_33010175_33010211	0.0421156	CACAGUG	ENST00000300177.4|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist 	ENST00000560677.1|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist 	ENST00000560830.1|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist
hg19_v2_chr18_-_61089665_61089733	0.0420118	CACAGUG	ENST00000238497.5|VPS4B|ENSG00000119541.5|vacuolar protein sorting 4 homolog B (S. cerevisiae)
hg19_v2_chr1_-_95007193_95007356	0.0411019	CACAGUG	ENST00000370207.4|F3|ENSG00000117525.9|coagulation factor III (thromboplastin, tissue factor) 	ENST00000334047.7|F3|ENSG00000117525.9|coagulation factor III (thromboplastin, tissue factor)
hg19_v2_chr12_-_111180644_111180744	0.0409436	CACAGUG	ENST00000551676.1|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme 	ENST00000550991.1|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme 	ENST00000335007.5|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme 	ENST00000340766.5|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme
hg19_v2_chr1_+_97187318_97187380	0.0407037	CACAGUG	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr9_-_127905736_127905815	0.0406425	CACAGUG	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr3_+_182511266_182511308	0.0404239	CACAGUG	ENST00000323116.5|ATP11B|ENSG00000058063.11|ATPase, class VI, type 11B 	ENST00000493826.1|ATP11B|ENSG00000058063.11|ATPase, class VI, type 11B
hg19_v2_chrX_-_73834449_73834481	0.0403928	CACAGUG	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chr17_+_45727204_45727220	0.0403684	CACAGUG	ENST00000290158.4|KPNB1|ENSG00000108424.5|karyopherin (importin) beta 1
hg19_v2_chr3_+_150804676_150804697	0.0401764	CACAGUG	ENST00000474524.1|MED12L|ENSG00000144893.8|mediator complex subunit 12-like 	ENST00000273432.4|MED12L|ENSG00000144893.8|mediator complex subunit 12-like
hg19_v2_chr6_-_139695757_139695795	0.0401479	CACAGUG	ENST00000367651.2|CITED2|ENSG00000164442.8|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v2_chr12_+_50135588_50135605	0.0398694	CACAGUG	ENST00000423828.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000550445.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6
hg19_v2_chr2_-_64881018_64881064	0.0396671	CACAGUG	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chr14_-_100070363_100070467	0.0396147	CACAGUG	ENST00000380243.4|CCDC85C|ENSG00000205476.4|coiled-coil domain containing 85C
hg19_v2_chr6_+_44238203_44238222	0.0395339	CACAGUG	ENST00000451188.2|TMEM151B|ENSG00000178233.13|transmembrane protein 151B
hg19_v2_chr10_-_113943447_113943536	0.0394366	CACAGUG	ENST00000369425.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000348367.4|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000423155.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial
hg19_v2_chr5_+_36876833_36876894	0.0394133	CACAGUG	ENST00000282516.8|NIPBL|ENSG00000164190.12|Nipped-B homolog (Drosophila) 	ENST00000448238.2|NIPBL|ENSG00000164190.12|Nipped-B homolog (Drosophila)
hg19_v2_chr1_-_40137710_40137824	0.0393715	CACAGUG	ENST00000235628.1|NT5C1A|ENSG00000116981.3|5'-nucleotidase, cytosolic IA
hg19_v2_chr3_+_193310918_193310934	0.0391807	CACAGUG	ENST00000361908.3|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000392438.3|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361510.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361715.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361828.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361150.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant)
hg19_v2_chr7_+_100210133_100210214	0.0386284	CACAGUG	ENST00000393950.2|MOSPD3|ENSG00000106330.7|motile sperm domain containing 3 	ENST00000424091.2|MOSPD3|ENSG00000106330.7|motile sperm domain containing 3
hg19_v2_chr2_-_178128528_178128574	0.038614	CACAGUG	ENST00000397063.4|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2 	ENST00000421929.1|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2
hg19_v2_chr17_+_60536002_60536040	0.0382924	CACAGUG	ENST00000582809.1|TLK2|ENSG00000146872.13|tousled-like kinase 2
hg19_v2_chr14_-_30396948_30396998	0.03824	CACAGUG	ENST00000331968.5|PRKD1|ENSG00000184304.10|protein kinase D1
hg19_v2_chr14_-_39901618_39901704	0.038233	CACAGUG	ENST00000554932.1|FBXO33|ENSG00000165355.7|F-box protein 33 	ENST00000298097.7|FBXO33|ENSG00000165355.7|F-box protein 33
hg19_v2_chr9_-_3525968_3526016	0.0380446	CACAGUG	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr16_-_12009735_12009793	0.0378751	CACAGUG	ENST00000439887.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1 	ENST00000434724.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1
hg19_v2_chr2_+_196521458_196521491	0.0378653	CACAGUG	ENST00000409086.3|SLC39A10|ENSG00000196950.9|solute carrier family 39 (zinc transporter), member 10
hg19_v2_chr20_+_2673383_2673525	0.0378239	CACAGUG	ENST00000380648.4|EBF4|ENSG00000088881.16|early B-cell factor 4 	ENST00000342725.5|EBF4|ENSG00000088881.16|early B-cell factor 4
hg19_v2_chr10_-_60027642_60027705	0.0378007	CACAGUG	ENST00000373935.3|IPMK|ENSG00000151151.5|inositol polyphosphate multikinase
hg19_v2_chr16_-_57219966_57220028	0.0376571	CACAGUG	ENST00000565760.1|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A 	ENST00000309137.8|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A 	ENST00000570184.1|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A 	ENST00000562324.1|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A
hg19_v2_chr11_+_120107344_120107351	0.0376552	CACAGUG	ENST00000260264.4|POU2F3|ENSG00000137709.5|POU class 2 homeobox 3
hg19_v2_chr3_+_156008809_156008839	0.0376267	CACAGUG	ENST00000302490.8|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v2_chr7_-_75368248_75368265	0.0373302	CACAGUG	ENST00000434438.2|HIP1|ENSG00000127946.12|huntingtin interacting protein 1 	ENST00000336926.6|HIP1|ENSG00000127946.12|huntingtin interacting protein 1
hg19_v2_chr19_+_57154508_57154517	0.037063	CACAGUG	ENST00000598409.1|SMIM17|ENSG00000268182.1|small integral membrane protein 17
hg19_v2_chr9_-_130533615_130533717	0.0367814	CACAGUG	ENST00000373277.4|SH2D3C|ENSG00000095370.15|SH2 domain containing 3C
hg19_v2_chr11_-_123525289_123525341	0.0363698	CACAGUG	ENST00000392770.2|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit 	ENST00000299333.3|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit 	ENST00000530277.1|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit
hg19_v2_chr20_+_49348081_49348096	0.0363698	CACAGUG	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr8_+_98656336_98656535	0.0361088	CACAGUG	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr17_+_15848231_15848231	0.0360035	CACAGUG	ENST00000304222.2|ADORA2B|ENSG00000170425.3|adenosine A2b receptor
hg19_v2_chr11_-_18765389_18765499	0.0350878	CACAGUG	ENST00000477854.1|PTPN5|ENSG00000110786.13|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
hg19_v2_chr14_+_19553365_19553365	0.0350249	CACAGUG	ENST00000409832.3|POTEG|ENSG00000222036.3|POTE ankyrin domain family, member G
hg19_v2_chr8_+_76452097_76452126	0.0349043	CACAGUG	ENST00000396423.2|HNF4G|ENSG00000164749.7|hepatocyte nuclear factor 4, gamma
hg19_v2_chr2_+_120517174_120517207	0.0347322	CACAGUG	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr10_-_70287231_70287290	0.0346082	CACAGUG	ENST00000609923.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr6_+_7107999_7108054	0.0344325	CACAGUG	ENST00000491191.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000379938.2|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000471433.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1
hg19_v2_chr1_-_85725316_85725367	0.0344193	CACAGUG	ENST00000344356.5|C1orf52|ENSG00000162642.9|chromosome 1 open reading frame 52 	ENST00000471115.1|C1orf52|ENSG00000162642.9|chromosome 1 open reading frame 52
hg19_v2_chr16_+_66914264_66914516	0.0343386	CACAGUG	ENST00000311765.2|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568869.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000561704.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568398.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000566776.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2
hg19_v2_chr4_-_22517620_22517712	0.0337862	CACAGUG	ENST00000502482.1|GPR125|ENSG00000152990.9|G protein-coupled receptor 125 	ENST00000334304.5|GPR125|ENSG00000152990.9|G protein-coupled receptor 125
hg19_v2_chr11_-_31839488_31839515	0.0334577	CACAGUG	ENST00000419022.1|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379132.3|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379129.2|PAX6|ENSG00000007372.16|paired box 6
hg19_v2_chr6_+_117002339_117002400	0.0328306	CACAGUG	ENST00000413340.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000368564.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000356348.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6)
hg19_v2_chr9_+_118916082_118916108	0.0325339	CACAGUG	ENST00000328252.3|PAPPA|ENSG00000182752.8|pregnancy-associated plasma protein A, pappalysin 1
hg19_v2_chr5_+_133984462_133984514	0.0323577	CACAGUG	ENST00000398844.2|SEC24A|ENSG00000113615.8|SEC24 family member A 	ENST00000322887.4|SEC24A|ENSG00000113615.8|SEC24 family member A
hg19_v2_chr4_+_170541660_170541677	0.0320145	CACAGUG	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr2_-_119605253_119605264	0.0317578	CACAGUG	ENST00000295206.6|EN1|ENSG00000163064.6|engrailed homeobox 1
hg19_v2_chr5_-_93447333_93447386	0.031747	CACAGUG	ENST00000395965.3|FAM172A|ENSG00000113391.12|family with sequence similarity 172, member A 	ENST00000505869.1|FAM172A|ENSG00000113391.12|family with sequence similarity 172, member A 	ENST00000509163.1|FAM172A|ENSG00000113391.12|family with sequence similarity 172, member A
hg19_v2_chrX_+_102631248_102631335	0.0315279	CACAGUG	ENST00000361298.4|NGFRAP1|ENSG00000166681.9|nerve growth factor receptor (TNFRSF16) associated protein 1 	ENST00000372645.3|NGFRAP1|ENSG00000166681.9|nerve growth factor receptor (TNFRSF16) associated protein 1 	ENST00000372635.1|NGFRAP1|ENSG00000166681.9|nerve growth factor receptor (TNFRSF16) associated protein 1
hg19_v2_chr11_-_82611448_82611639	0.0315271	CACAGUG	ENST00000393399.2|PRCP|ENSG00000137509.6|prolylcarboxypeptidase (angiotensinase C) 	ENST00000313010.3|PRCP|ENSG00000137509.6|prolylcarboxypeptidase (angiotensinase C)
hg19_v2_chr3_+_137906109_137906153	0.0315146	CACAGUG	ENST00000481646.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000469044.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000491704.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000461600.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8
hg19_v2_chr5_+_179921430_179921461	0.0313846	CACAGUG	ENST00000393356.1|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr1_-_95392635_95392834	0.0313023	CACAGUG	ENST00000538964.1|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000394202.4|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000370206.4|CNN3|ENSG00000117519.11|calponin 3, acidic
hg19_v2_chr6_+_133562472_133562556	0.0311945	CACAGUG	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chr6_+_136172820_136172846	0.0311584	CACAGUG	ENST00000308191.6|PDE7B|ENSG00000171408.9|phosphodiesterase 7B
hg19_v2_chr7_-_105029329_105029376	0.0311422	CACAGUG	ENST00000393651.3|SRPK2|ENSG00000135250.12|SRSF protein kinase 2 	ENST00000460391.1|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr2_-_111334678_111334762	0.0309866	CACAGUG	ENST00000329516.3|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000330331.5|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000446930.1|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6
hg19_v2_chr14_-_20020272_20020272	0.0305041	CACAGUG	ENST00000551509.1|POTEM|ENSG00000187537.9|POTE ankyrin domain family, member M
hg19_v2_chr3_-_87040233_87040257	0.0302318	CACAGUG	ENST00000398399.2|VGLL3|ENSG00000206538.3|vestigial like 3 (Drosophila)
hg19_v2_chr1_-_225840747_225840860	0.0302252	CACAGUG	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr9_+_103790991_103791001	0.0301566	CACAGUG	ENST00000374874.3|LPPR1|ENSG00000148123.10|Lipid phosphate phosphatase-related protein type 1
hg19_v2_chrX_+_133507327_133507386	0.0301106	CACAGUG	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chr12_-_14133053_14133159	0.0299557	CACAGUG	ENST00000609686.1|GRIN2B|ENSG00000273079.1|glutamate receptor, ionotropic, N-methyl D-aspartate 2B
hg19_v2_chr4_+_144257915_144258009	0.0298963	CACAGUG	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr6_-_146135880_146135952	0.0298267	CACAGUG	ENST00000237281.4|FBXO30|ENSG00000118496.4|F-box protein 30
hg19_v2_chr9_-_26947453_26947473	0.0296149	CACAGUG	ENST00000397292.3|PLAA|ENSG00000137055.10|phospholipase A2-activating protein
hg19_v2_chr1_-_161059380_161059392	0.0294662	CACAGUG	ENST00000368012.3|PVRL4|ENSG00000143217.7|poliovirus receptor-related 4
hg19_v2_chrX_-_40594755_40594809	0.0292704	CACAGUG	ENST00000324817.1|MED14|ENSG00000180182.6|mediator complex subunit 14
hg19_v2_chr14_-_92413727_92413743	0.0291853	CACAGUG	ENST00000267620.10|FBLN5|ENSG00000140092.10|fibulin 5
hg19_v2_chr17_-_37557846_37557920	0.0290917	CACAGUG	ENST00000394294.3|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000583610.1|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000264658.6|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20
hg19_v2_chr1_-_67896095_67896106	0.0290733	CACAGUG	ENST00000370994.4|SERBP1|ENSG00000142864.10|SERPINE1 mRNA binding protein 1
hg19_v2_chr12_-_77272765_77272840	0.0285984	CACAGUG	ENST00000547435.1|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2 	ENST00000552330.1|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2 	ENST00000546966.1|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2 	ENST00000311083.5|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2
hg19_v2_chr13_+_113622810_113622830	0.0284471	CACAGUG	ENST00000397030.1|MCF2L|ENSG00000126217.16|MCF.2 cell line derived transforming sequence-like
hg19_v2_chr10_+_31608054_31608156	0.0283453	CACAGUG	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr6_-_24911195_24911343	0.0278467	CACAGUG	ENST00000259698.4|FAM65B|ENSG00000111913.11|family with sequence similarity 65, member B
hg19_v2_chrX_-_154493791_154493874	0.0275697	CACAGUG	ENST00000369454.3|RAB39B|ENSG00000155961.4|RAB39B, member RAS oncogene family
hg19_v2_chr7_+_21467642_21467671	0.0274838	CACAGUG	ENST00000222584.3|SP4|ENSG00000105866.9|Sp4 transcription factor 	ENST00000432066.2|SP4|ENSG00000105866.9|Sp4 transcription factor
hg19_v2_chr3_+_178866199_178866311	0.0270299	CACAGUG	ENST00000263967.3|PIK3CA|ENSG00000121879.3|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
hg19_v2_chr5_+_82767284_82767310	0.0269347	CACAGUG	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr9_-_140196703_140196744	0.0266775	CACAGUG	ENST00000356628.2|NRARP|ENSG00000198435.2|NOTCH-regulated ankyrin repeat protein
hg19_v2_chr4_-_39640700_39640712	0.0265695	CACAGUG	ENST00000295958.5|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr14_+_35515598_35515637	0.0264845	CACAGUG	ENST00000280987.4|FAM177A1|ENSG00000151327.8|family with sequence similarity 177, member A1
hg19_v2_chrX_+_72783026_72783049	0.0263336	CACAGUG	ENST00000373504.6|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1 	ENST00000373502.5|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1
hg19_v2_chr4_+_39699664_39699772	0.0259661	CACAGUG	ENST00000261427.5|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000510934.1|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000295963.6|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K
hg19_v2_chr7_+_127881325_127881337	0.0256429	CACAGUG	ENST00000308868.4|LEP|ENSG00000174697.4|leptin
hg19_v2_chr3_+_36421826_36421844	0.0253962	CACAGUG	ENST00000273183.3|STAC|ENSG00000144681.6|SH3 and cysteine rich domain
hg19_v2_chr6_-_99873145_99873207	0.0250794	CACAGUG	ENST00000369239.5|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein 	ENST00000438806.1|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein
hg19_v2_chr19_+_45973120_45973171	0.0245944	CACAGUG	ENST00000592811.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000586615.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v2_chr17_+_54911444_54911564	0.0243575	CACAGUG	ENST00000284061.3|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa 	ENST00000572810.1|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa
hg19_v2_chr14_-_78083112_78083140	0.0242228	CACAGUG	ENST00000216484.2|SPTLC2|ENSG00000100596.2|serine palmitoyltransferase, long chain base subunit 2
hg19_v2_chr20_+_62795827_62795878	0.0238765	CACAGUG	ENST00000328439.1|MYT1|ENSG00000196132.7|myelin transcription factor 1 	ENST00000536311.1|MYT1|ENSG00000196132.7|myelin transcription factor 1
hg19_v2_chrX_+_51486481_51486549	0.0237825	CACAGUG	ENST00000340438.4|GSPT2|ENSG00000189369.7|G1 to S phase transition 2
hg19_v2_chr5_-_95297678_95297775	0.0234292	CACAGUG	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr3_-_72496035_72496069	0.0233112	CACAGUG	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr9_+_131445928_131445934	0.0232664	CACAGUG	ENST00000372692.4|SET|ENSG00000119335.12|SET nuclear oncogene
hg19_v2_chr1_+_113933581_113933611	0.0231765	CACAGUG	ENST00000307546.9|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369615.1|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369611.4|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3
hg19_v2_chr11_-_63439013_63439091	0.0228164	CACAGUG	ENST00000398868.3|ATL3|ENSG00000184743.8|atlastin GTPase 3
hg19_v2_chr6_-_80657292_80657301	0.0227295	CACAGUG	ENST00000369816.4|ELOVL4|ENSG00000118402.5|ELOVL fatty acid elongase 4
hg19_v2_chr10_+_69644404_69644427	0.0221585	CACAGUG	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr10_+_127408263_127408308	0.0218515	CACAGUG	ENST00000337623.3|C10orf137|ENSG00000107938.13|erythroid differentiation regulatory factor 1
hg19_v2_chr15_-_65282274_65282281	0.0217753	CACAGUG	ENST00000204566.2|SPG21|ENSG00000090487.6|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v2_chr10_-_124768300_124768334	0.0217224	CACAGUG	ENST00000368886.5|IKZF5|ENSG00000095574.7|IKAROS family zinc finger 5 (Pegasus)
hg19_v2_chr1_-_217804377_217804446	0.0216906	CACAGUG	ENST00000366935.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2 	ENST00000366934.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2
hg19_v2_chr3_-_196159268_196159345	0.0216427	CACAGUG	ENST00000381887.3|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000535858.1|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000428095.1|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000296328.4|UBXN7|ENSG00000163960.7|UBX domain protein 7
hg19_v2_chr16_-_65155833_65155976	0.0213935	CACAGUG	ENST00000566827.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000394156.3|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000562998.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast)
hg19_v2_chr3_+_43732362_43732408	0.021255	CACAGUG	ENST00000458276.2|ABHD5|ENSG00000011198.3|abhydrolase domain containing 5
hg19_v2_chr14_+_51706886_51707006	0.0211922	CACAGUG	ENST00000457354.2|TMX1|ENSG00000139921.8|thioredoxin-related transmembrane protein 1
hg19_v2_chr11_+_12695944_12695989	0.0210118	CACAGUG	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr16_-_58663720_58663790	0.0206279	CACAGUG	ENST00000564557.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569240.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000441024.2|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569020.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000317147.5|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1
hg19_v2_chr11_-_10562710_10562782	0.0204741	CACAGUG	ENST00000528665.1|RNF141|ENSG00000110315.2|ring finger protein 141 	ENST00000265981.2|RNF141|ENSG00000110315.2|ring finger protein 141
hg19_v2_chr6_-_99797522_99797572	0.0203529	CACAGUG	ENST00000389677.5|FAXC|ENSG00000146267.11|failed axon connections homolog (Drosophila)
hg19_v2_chr12_+_54943134_54943182	0.0200137	CACAGUG	ENST00000243052.3|PDE1B|ENSG00000123360.7|phosphodiesterase 1B, calmodulin-dependent
hg19_v2_chr1_-_184943610_184943682	0.0197468	CACAGUG	ENST00000367511.3|FAM129A|ENSG00000135842.12|family with sequence similarity 129, member A
hg19_v2_chr20_+_43514315_43514319	0.0196486	CACAGUG	ENST00000353703.4|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
hg19_v2_chr4_+_699537_699600	0.0195999	CACAGUG	ENST00000419774.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000362003.5|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000400151.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000427463.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000470161.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3
hg19_v2_chr12_-_117628333_117628339	0.0194058	CACAGUG	ENST00000427718.2|FBXO21|ENSG00000135108.10|F-box protein 21
hg19_v2_chr1_+_32573636_32573673	0.0193552	CACAGUG	ENST00000373625.3|KPNA6|ENSG00000025800.9|karyopherin alpha 6 (importin alpha 7)
hg19_v2_chr12_+_27396901_27397108	0.0192509	CACAGUG	ENST00000541191.1|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like 	ENST00000389032.3|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like
hg19_v2_chr16_-_48644061_48644141	0.0191194	CACAGUG	ENST00000262384.3|N4BP1|ENSG00000102921.3|NEDD4 binding protein 1
hg19_v2_chr17_+_57970469_57970600	0.0190784	CACAGUG	ENST00000443572.2|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000406116.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000225577.4|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000393021.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1
hg19_v2_chr9_-_100395756_100395962	0.0189593	CACAGUG	ENST00000341170.4|TSTD2|ENSG00000136925.10|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 	ENST00000354801.2|TSTD2|ENSG00000136925.10|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
hg19_v2_chr5_+_34656331_34656351	0.0187632	CACAGUG	ENST00000265109.3|RAI14|ENSG00000039560.9|retinoic acid induced 14
hg19_v2_chr3_-_141868357_141868393	0.0184412	CACAGUG	ENST00000489671.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000475734.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000467072.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000499676.2|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr12_-_31744031_31744059	0.0181652	CACAGUG	ENST00000389082.5|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr3_-_98620500_98620547	0.0180286	CACAGUG	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr8_-_67525473_67525518	0.017757	CACAGUG	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr15_-_73661605_73661605	0.0175686	CACAGUG	ENST00000261917.3|HCN4|ENSG00000138622.3|hyperpolarization activated cyclic nucleotide-gated potassium channel 4
hg19_v2_chr1_-_35395178_35395265	0.0175359	CACAGUG	ENST00000373347.1|DLGAP3|ENSG00000116544.7|discs, large (Drosophila) homolog-associated protein 3
hg19_v2_chr4_-_53525406_53525502	0.0173784	CACAGUG	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr20_-_48770174_48770243	0.0173061	CACAGUG	ENST00000341698.2|TMEM189-UBE2V1|ENSG00000124208.16|TMEM189-UBE2V1 readthrough
hg19_v2_chr10_+_21823079_21823102	0.0172517	CACAGUG	ENST00000377100.3|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 	ENST00000377072.3|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 	ENST00000446906.2|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
hg19_v2_chr1_+_26737253_26737269	0.0172213	CACAGUG	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr10_+_105726862_105726986	0.0170134	CACAGUG	ENST00000335753.4|SLK|ENSG00000065613.9|STE20-like kinase 	ENST00000369755.3|SLK|ENSG00000065613.9|STE20-like kinase
hg19_v2_chr16_-_47177874_47177922	0.0169352	CACAGUG	ENST00000562435.1|NETO2|ENSG00000171208.5|neuropilin (NRP) and tolloid (TLL)-like 2
hg19_v2_chr2_+_7057523_7057613	0.0169232	CACAGUG	ENST00000320892.6|RNF144A|ENSG00000151692.10|ring finger protein 144A
hg19_v2_chr14_+_37667118_37667192	0.0169069	CACAGUG	ENST00000556615.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000327441.7|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000536774.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1
hg19_v2_chr5_+_67511524_67511628	0.0167823	CACAGUG	ENST00000521381.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 	ENST00000521657.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr2_-_85555385_85555548	0.0166568	CACAGUG	ENST00000377386.3|TGOLN2|ENSG00000152291.9|trans-golgi network protein 2
hg19_v2_chr17_-_42143963_42144103	0.016591	CACAGUG	ENST00000585388.1|LSM12|ENSG00000161654.5|LSM12 homolog (S. cerevisiae) 	ENST00000293406.3|LSM12|ENSG00000161654.5|LSM12 homolog (S. cerevisiae)
hg19_v2_chr12_+_56137064_56137183	0.016467	CACAGUG	ENST00000257868.5|GDF11|ENSG00000135414.5|growth differentiation factor 11 	ENST00000546799.1|GDF11|ENSG00000135414.5|growth differentiation factor 11
hg19_v2_chr2_+_24714729_24714927	0.0164442	CACAGUG	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr9_+_34958254_34958321	0.0164395	CACAGUG	ENST00000242315.3|KIAA1045|ENSG00000122733.11|KIAA1045
hg19_v2_chr12_+_54422142_54422239	0.0163505	CACAGUG	ENST00000243108.4|HOXC6|ENSG00000197757.7|homeobox C6
hg19_v2_chr2_-_100721178_100721307	0.0161909	CACAGUG	ENST00000409236.2|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3
hg19_v2_chr2_-_151344172_151344243	0.0159962	CACAGUG	ENST00000375734.2|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000263895.4|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000454202.1|RND3|ENSG00000115963.9|Rho family GTPase 3
hg19_v2_chr17_-_8534067_8534088	0.0159796	CACAGUG	ENST00000360416.3|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle 	ENST00000269243.4|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle
hg19_v2_chr14_+_51338816_51338878	0.0159424	CACAGUG	ENST00000353130.1|ABHD12B|ENSG00000131969.10|abhydrolase domain containing 12B 	ENST00000337334.2|ABHD12B|ENSG00000131969.10|abhydrolase domain containing 12B 	ENST00000395752.1|ABHD12B|ENSG00000131969.10|abhydrolase domain containing 12B
hg19_v2_chr6_+_163835669_163835693	0.0158102	CACAGUG	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr9_+_129622904_129622956	0.0155936	CACAGUG	ENST00000319119.4|ZBTB34|ENSG00000177125.5|zinc finger and BTB domain containing 34
hg19_v2_chr15_+_72947079_72947079	0.0155083	CACAGUG	ENST00000421285.3|GOLGA6B|ENSG00000215186.6|golgin A6 family, member B
hg19_v2_chr7_-_141401951_141401985	0.0154669	CACAGUG	ENST00000536163.1|KIAA1147|ENSG00000257093.2|KIAA1147
hg19_v2_chr1_-_114355083_114355123	0.0152871	CACAGUG	ENST00000261441.5|RSBN1|ENSG00000081019.9|round spermatid basic protein 1
hg19_v2_chr7_-_23053693_23053715	0.0151947	CACAGUG	ENST00000409763.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A 	ENST00000409923.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A
hg19_v2_chr3_+_122785895_122786001	0.0142988	CACAGUG	ENST00000316218.7|PDIA5|ENSG00000065485.13|protein disulfide isomerase family A, member 5
hg19_v2_chr11_-_108093329_108093375	0.0142113	CACAGUG	ENST00000278612.8|NPAT|ENSG00000149308.12|nuclear protein, ataxia-telangiectasia locus
hg19_v2_chr10_+_111967345_111967442	0.0140594	CACAGUG	ENST00000332674.5|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein 	ENST00000453116.1|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr1_-_92351769_92351787	0.0140124	CACAGUG	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chrX_-_80065146_80065250	0.0136303	CACAGUG	ENST00000373275.4|BRWD3|ENSG00000165288.10|bromodomain and WD repeat domain containing 3
hg19_v2_chr2_+_135676381_135676435	0.0134912	CACAGUG	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr18_-_5296001_5296045	0.0133161	CACAGUG	ENST00000357006.4|ZBTB14|ENSG00000198081.6|zinc finger and BTB domain containing 14
hg19_v2_chr3_-_171178157_171178225	0.0133156	CACAGUG	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr13_-_76056250_76056280	0.0132102	CACAGUG	ENST00000377636.3|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000431480.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000377625.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000425511.1|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4
hg19_v2_chr4_-_23891693_23891706	0.0128326	CACAGUG	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr14_-_92572894_92572965	0.0122121	CACAGUG	ENST00000532032.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000506466.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000555381.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000557311.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554592.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554672.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000553491.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000556220.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000502250.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000503767.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000393287.5|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000340660.6|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000545170.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000429774.2|ATXN3|ENSG00000066427.17|ataxin 3
hg19_v2_chr17_-_37607497_37607539	0.0122119	CACAGUG	ENST00000394287.3|MED1|ENSG00000125686.7|mediator complex subunit 1 	ENST00000300651.6|MED1|ENSG00000125686.7|mediator complex subunit 1
hg19_v2_chr1_-_45452240_45452287	0.0121965	CACAGUG	ENST00000372183.3|EIF2B3|ENSG00000070785.12|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa 	ENST00000372182.4|EIF2B3|ENSG00000070785.12|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa 	ENST00000360403.2|EIF2B3|ENSG00000070785.12|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa
hg19_v2_chr17_+_25621102_25621157	0.0119651	CACAGUG	ENST00000581440.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000262394.2|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000583742.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000579733.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000583193.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000581185.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000427287.2|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000348811.2|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1
hg19_v2_chr17_+_27717415_27717618	0.0114562	CACAGUG	ENST00000583121.1|TAOK1|ENSG00000160551.5|TAO kinase 1 	ENST00000261716.3|TAOK1|ENSG00000160551.5|TAO kinase 1
hg19_v2_chr8_-_10588010_10588030	0.0114442	CACAGUG	ENST00000304501.1|SOX7|ENSG00000171056.6|SRY (sex determining region Y)-box 7
hg19_v2_chr5_-_89825328_89825422	0.0113199	CACAGUG	ENST00000500869.2|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000315948.6|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000509384.1|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3
hg19_v2_chr19_+_926000_926046	0.0107481	CACAGUG	ENST00000263620.3|ARID3A|ENSG00000116017.6|AT rich interactive domain 3A (BRIGHT-like)
hg19_v2_chr3_+_191046810_191046874	0.0106659	CACAGUG	ENST00000392455.3|CCDC50|ENSG00000152492.9|coiled-coil domain containing 50 	ENST00000392456.3|CCDC50|ENSG00000152492.9|coiled-coil domain containing 50
hg19_v2_chr15_-_59949693_59949751	0.0105566	CACAGUG	ENST00000396063.1|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa 	ENST00000396064.3|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa 	ENST00000484743.1|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa 	ENST00000559706.1|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa 	ENST00000396060.2|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa
hg19_v2_chr16_+_67063036_67063088	0.0103904	CACAGUG	ENST00000290858.6|CBFB|ENSG00000067955.9|core-binding factor, beta subunit 	ENST00000564034.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr16_-_80838195_80838228	0.0103476	CACAGUG	ENST00000570137.2|CDYL2|ENSG00000166446.10|chromodomain protein, Y-like 2
hg19_v2_chr5_-_89770582_89770603	0.0103316	CACAGUG	ENST00000316610.6|MBLAC2|ENSG00000176055.9|metallo-beta-lactamase domain containing 2
hg19_v2_chr7_+_94285637_94285689	0.0101133	CACAGUG	ENST00000482108.1|PEG10|ENSG00000242265.1|paternally expressed 10 	ENST00000488574.1|PEG10|ENSG00000242265.1|paternally expressed 10
hg19_v2_chr19_-_2721412_2721419	0.00997176	CACAGUG	ENST00000323469.4|DIRAS1|ENSG00000176490.4|DIRAS family, GTP-binding RAS-like 1
hg19_v2_chr9_-_135819987_135820020	0.00990885	CACAGUG	ENST00000298552.3|TSC1|ENSG00000165699.9|tuberous sclerosis 1 	ENST00000403810.1|TSC1|ENSG00000165699.9|tuberous sclerosis 1
hg19_v2_chr17_+_47865917_47866068	0.00970438	CACAGUG	ENST00000259021.4|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000454930.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000509773.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000510819.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000424009.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7
hg19_v2_chr7_-_27205136_27205164	0.00964207	CACAGUG	ENST00000396345.1|HOXA9|ENSG00000078399.11|homeobox A9 	ENST00000343483.6|HOXA9|ENSG00000078399.11|homeobox A9
hg19_v2_chr4_-_42659102_42659161	0.00948399	CACAGUG	ENST00000264449.10|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000510289.1|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000381668.5|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
hg19_v2_chr2_-_197791441_197791525	0.00944232	CACAGUG	ENST00000409475.1|PGAP1|ENSG00000197121.10|post-GPI attachment to proteins 1 	ENST00000354764.4|PGAP1|ENSG00000197121.10|post-GPI attachment to proteins 1 	ENST00000374738.3|PGAP1|ENSG00000197121.10|post-GPI attachment to proteins 1
hg19_v2_chr10_+_22605304_22605372	0.00944144	CACAGUG	ENST00000475460.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000602390.1|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000456711.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000444869.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000489125.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough
hg19_v2_chr4_-_90229142_90229217	0.00936672	CACAGUG	ENST00000609438.1|GPRIN3|ENSG00000185477.4|GPRIN family member 3
hg19_v2_chr2_+_181845298_181845378	0.00920632	CACAGUG	ENST00000410062.4|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3
hg19_v2_chr13_-_25746416_25746433	0.00905594	CACAGUG	ENST00000515384.1|AMER2|ENSG00000165566.11|APC membrane recruitment protein 2 	ENST00000357816.2|AMER2|ENSG00000165566.11|APC membrane recruitment protein 2
hg19_v2_chr4_-_89744457_89744512	0.00896302	CACAGUG	ENST00000395002.2|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr12_-_54813229_54813273	0.00885281	CACAGUG	ENST00000293379.4|ITGA5|ENSG00000161638.6|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
hg19_v2_chr1_-_35658736_35658754	0.00851528	CACAGUG	ENST00000357214.5|SFPQ|ENSG00000116560.6|splicing factor proline/glutamine-rich
hg19_v2_chr1_-_235491462_235491534	0.00829077	CACAGUG	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr12_+_3600356_3600406	0.00817931	CACAGUG	ENST00000382622.3|PRMT8|ENSG00000111218.7|protein arginine methyltransferase 8
hg19_v2_chr3_-_119813264_119813272	0.00805968	CACAGUG	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr18_-_23670546_23670605	0.00804957	CACAGUG	ENST00000542743.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000545952.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000539849.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000415083.2|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18
hg19_v2_chr8_+_38614807_38614851	0.00797204	CACAGUG	ENST00000330691.6|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000348567.4|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr5_+_112312416_112312440	0.00793757	CACAGUG	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr3_-_128212016_128212051	0.00777998	CACAGUG	ENST00000498200.1|GATA2|ENSG00000179348.7|GATA binding protein 2 	ENST00000341105.2|GATA2|ENSG00000179348.7|GATA binding protein 2
hg19_v2_chr13_-_108518986_108519083	0.00774224	CACAGUG	ENST00000375915.2|FAM155A|ENSG00000204442.2|family with sequence similarity 155, member A
hg19_v2_chr1_+_167190066_167190156	0.00770224	CACAGUG	ENST00000367866.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000429375.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000452019.1|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000420254.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000541643.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1
hg19_v2_chr5_+_50678921_50678921	0.00767547	CACAGUG	ENST00000230658.7|ISL1|ENSG00000016082.10|ISL LIM homeobox 1
hg19_v2_chr5_+_14664762_14664868	0.00753291	CACAGUG	ENST00000284274.4|FAM105B|ENSG00000154124.4|family with sequence similarity 105, member B
hg19_v2_chr18_-_70535177_70535254	0.00735856	CACAGUG	ENST00000327305.6|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v2_chr6_-_90529418_90529528	0.00724529	CACAGUG	ENST00000439638.1|MDN1|ENSG00000112159.7|MDN1, midasin homolog (yeast) 	ENST00000369393.3|MDN1|ENSG00000112159.7|MDN1, midasin homolog (yeast) 	ENST00000428876.1|MDN1|ENSG00000112159.7|MDN1, midasin homolog (yeast)
hg19_v2_chr3_-_56502375_56502428	0.00706792	CACAGUG	ENST00000288221.6|ERC2|ENSG00000187672.8|ELKS/RAB6-interacting/CAST family member 2
hg19_v2_chr11_-_18656028_18656040	0.00700934	CACAGUG	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr4_-_174451370_174451387	0.00695586	CACAGUG	ENST00000359562.4|HAND2|ENSG00000164107.7|heart and neural crest derivatives expressed 2
hg19_v2_chr1_+_110082487_110082535	0.00668408	CACAGUG	ENST00000527748.1|GPR61|ENSG00000156097.8|G protein-coupled receptor 61
hg19_v2_chr17_-_73775839_73775868	0.00663598	CACAGUG	ENST00000592643.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000591890.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000587171.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000254810.4|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000589599.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B)
hg19_v2_chr10_-_90712520_90712536	0.0064151	CACAGUG	ENST00000224784.6|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta
hg19_v2_chr2_+_173420697_173420873	0.00630115	CACAGUG	ENST00000282077.3|PDK1|ENSG00000152256.9|pyruvate dehydrogenase kinase, isozyme 1 	ENST00000392571.2|PDK1|ENSG00000152256.9|pyruvate dehydrogenase kinase, isozyme 1 	ENST00000410055.1|PDK1|ENSG00000152256.9|pyruvate dehydrogenase kinase, isozyme 1
hg19_v2_chr16_-_53737795_53737850	0.0061151	CACAGUG	ENST00000262135.4|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000564374.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000566096.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like
hg19_v2_chr11_-_57004658_57004739	0.00608802	CACAGUG	ENST00000606794.1|APLNR|ENSG00000134817.9|apelin receptor
hg19_v2_chr22_+_39898325_39898382	0.00603339	CACAGUG	ENST00000325301.2|MIEF1|ENSG00000100335.8|mitochondrial elongation factor 1 	ENST00000404569.1|MIEF1|ENSG00000100335.8|mitochondrial elongation factor 1
hg19_v2_chr10_+_43572475_43572527	0.00563842	CACAGUG	ENST00000355710.3|RET|ENSG00000165731.13|ret proto-oncogene 	ENST00000498820.1|RET|ENSG00000165731.13|ret proto-oncogene 	ENST00000340058.5|RET|ENSG00000165731.13|ret proto-oncogene
hg19_v2_chr10_-_61666267_61666414	0.00547307	CACAGUG	ENST00000263102.6|CCDC6|ENSG00000108091.10|coiled-coil domain containing 6
hg19_v2_chr12_-_57400227_57400245	0.0054259	CACAGUG	ENST00000300101.2|ZBTB39|ENSG00000166860.2|zinc finger and BTB domain containing 39
hg19_v2_chr6_+_41606176_41606265	0.00536366	CACAGUG	ENST00000441667.1|MDFI|ENSG00000112559.9|MyoD family inhibitor 	ENST00000230321.6|MDFI|ENSG00000112559.9|MyoD family inhibitor 	ENST00000373050.4|MDFI|ENSG00000112559.9|MyoD family inhibitor 	ENST00000446650.1|MDFI|ENSG00000112559.9|MyoD family inhibitor 	ENST00000435476.1|MDFI|ENSG00000112559.9|MyoD family inhibitor
hg19_v2_chr11_+_120081475_120081488	0.00506996	CACAGUG	ENST00000328965.4|OAF|ENSG00000184232.4|OAF homolog (Drosophila)
hg19_v2_chr11_-_129062093_129062184	0.00472634	CACAGUG	ENST00000310343.9|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr2_-_47798044_47798132	0.00444802	CACAGUG	ENST00000327876.4|KCNK12|ENSG00000184261.4|potassium channel, subfamily K, member 12
hg19_v2_chr11_+_118401706_118401803	0.00408892	CACAGUG	ENST00000411589.2|TMEM25|ENSG00000149582.11|transmembrane protein 25 	ENST00000442938.2|TMEM25|ENSG00000149582.11|transmembrane protein 25 	ENST00000359862.4|TMEM25|ENSG00000149582.11|transmembrane protein 25
hg19_v2_chr1_-_71513471_71513506	0.00352105	CACAGUG	ENST00000370931.3|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000356595.4|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000306666.5|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000370932.2|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000351052.5|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000414819.1|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000370924.4|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3)
hg19_v2_chr19_+_19322758_19322782	0.00351588	CACAGUG	ENST00000252575.6|NCAN|ENSG00000130287.9|neurocan
hg19_v2_chr15_-_72490114_72490145	0.00351268	CACAGUG	ENST00000309731.7|GRAMD2|ENSG00000175318.7|GRAM domain containing 2
hg19_v2_chr7_+_98246588_98246609	0.00343633	CACAGUG	ENST00000265634.3|NPTX2|ENSG00000106236.3|neuronal pentraxin II
hg19_v2_chr4_+_155665123_155665158	0.00340323	CACAGUG	ENST00000336356.3|LRAT|ENSG00000121207.7|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)
hg19_v2_chr14_+_73603126_73603255	0.00320053	CACAGUG	ENST00000557356.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556864.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556533.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556951.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000557293.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000553719.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000553599.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556011.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000394157.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000357710.4|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000324501.5|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000560005.2|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000555254.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000261970.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000344094.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000554131.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000557037.1|PSEN1|ENSG00000080815.14|presenilin 1
hg19_v2_chr5_+_7396141_7396324	0.00293759	CACAGUG	ENST00000338316.4|ADCY2|ENSG00000078295.11|adenylate cyclase 2 (brain)
hg19_v2_chr2_-_191399426_191399475	0.00291104	CACAGUG	ENST00000409150.3|TMEM194B|ENSG00000189362.7|transmembrane protein 194B
hg19_v2_chr14_-_27066636_27066701	0.00266123	CACAGUG	ENST00000267422.7|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000344429.5|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000574031.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000465357.2|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000547619.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1
hg19_v2_chr10_+_102106829_102106881	0.00262887	CACAGUG	ENST00000370355.2|SCD|ENSG00000099194.5|stearoyl-CoA desaturase (delta-9-desaturase)
hg19_v2_chr5_+_137774706_137774806	0.00254057	CACAGUG	ENST00000378339.2|REEP2|ENSG00000132563.11|receptor accessory protein 2 	ENST00000254901.5|REEP2|ENSG00000132563.11|receptor accessory protein 2 	ENST00000506158.1|REEP2|ENSG00000132563.11|receptor accessory protein 2
hg19_v2_chr6_+_35995488_35995528	0.00230487	CACAGUG	ENST00000229795.3|MAPK14|ENSG00000112062.6|mitogen-activated protein kinase 14
hg19_v2_chrX_+_70316005_70316047	0.00227592	CACAGUG	ENST00000374259.3|FOXO4|ENSG00000184481.12|forkhead box O4
hg19_v2_chr2_+_119981384_119981446	0.00200933	CACAGUG	ENST00000393108.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000354888.5|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000450943.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000393110.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000393106.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000409811.1|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000393107.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase
hg19_v2_chr13_-_103053946_103054124	0.00175962	CACAGUG	ENST00000376131.4|FGF14|ENSG00000102466.11|fibroblast growth factor 14
hg19_v2_chrX_+_150151752_150151762	0.00168936	CACAGUG	ENST00000325307.7|HMGB3|ENSG00000029993.10|high mobility group box 3
hg19_v2_chr18_+_55102917_55102985	0.00147297	CACAGUG	ENST00000491143.2|ONECUT2|ENSG00000119547.5|one cut homeobox 2
hg19_v2_chr17_+_38278530_38278605	0.00134228	CACAGUG	ENST00000398532.4|MSL1|ENSG00000188895.7|male-specific lethal 1 homolog (Drosophila)
hg19_v2_chr5_-_31532160_31532221	0.00128727	CACAGUG	ENST00000511367.2|DROSHA|ENSG00000113360.12|drosha, ribonuclease type III 	ENST00000513349.1|DROSHA|ENSG00000113360.12|drosha, ribonuclease type III
hg19_v2_chr9_-_88714421_88714506	0.00111029	CACAGUG	ENST00000388712.3|GOLM1|ENSG00000135052.12|golgi membrane protein 1
hg19_v2_chr10_+_104678032_104678094	0.00108667	CACAGUG	ENST00000369878.4|CNNM2|ENSG00000148842.13|cyclin M2 	ENST00000369875.3|CNNM2|ENSG00000148842.13|cyclin M2
hg19_v2_chr3_-_79068594_79068627	0.000987861	CACAGUG	ENST00000436010.2|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr7_+_66386204_66386249	0.000883895	CACAGUG	ENST00000341567.4|TMEM248|ENSG00000106609.12|transmembrane protein 248 	ENST00000607045.1|TMEM248|ENSG00000106609.12|transmembrane protein 248
hg19_v2_chr12_+_72056773_72056796	0.000836705	CACAGUG	ENST00000308086.2|THAP2|ENSG00000173451.2|THAP domain containing, apoptosis associated protein 2
hg19_v2_chr1_-_166944652_166944733	0.00042329	CACAGUG	ENST00000528703.1|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2 	ENST00000525740.1|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2 	ENST00000529387.1|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2 	ENST00000469934.2|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2 	ENST00000529071.1|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2 	ENST00000526687.1|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2
hg19_v2_chr3_-_116164306_116164380	0.000330739	CACAGUG	ENST00000490035.2|LSAMP|ENSG00000185565.7|limbic system-associated membrane protein
hg19_v2_chr1_-_179198702_179198741	0.00027675	CACAGUG	ENST00000502732.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chr7_+_114055052_114055378	0.000179104	CACAGUG	ENST00000462331.1|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000408937.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000403559.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000350908.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393498.2|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393495.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000378237.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393489.3|FOXP2|ENSG00000128573.18|forkhead box P2
hg19_v2_chr6_+_10556215_10556240	4.63002e-05	CACAGUG	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr18_+_19749386_19749404	2.30526e-05	CACAGUG	ENST00000269216.3|GATA6|ENSG00000141448.4|GATA binding protein 6
