hg19_v2_chr1_-_70671216_70671303	0.124233	AUGUGCC	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr10_+_27793197_27793247	0.100693	AUGUGCC	ENST00000356940.6|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family 	ENST00000535776.1|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family
hg19_v2_chr2_+_60983361_60983418	0.0736393	AUGUGCC	ENST00000238714.3|PAPOLG|ENSG00000115421.8|poly(A) polymerase gamma
hg19_v2_chr3_+_31574189_31574282	0.0711301	AUGUGCC	ENST00000295770.2|STT3B|ENSG00000163527.5|STT3B, subunit of the oligosaccharyltransferase complex (catalytic)
hg19_v2_chr6_+_87865262_87865339	0.0669485	AUGUGCC	ENST00000369577.3|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000518845.1|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000339907.4|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000496806.2|ZNF292|ENSG00000188994.8|zinc finger protein 292
hg19_v2_chr10_+_112679301_112679346	0.0598973	AUGUGCC	ENST00000265277.5|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans) 	ENST00000369452.4|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans)
hg19_v2_chr5_-_76788317_76788421	0.0545038	AUGUGCC	ENST00000296679.4|WDR41|ENSG00000164253.8|WD repeat domain 41
hg19_v2_chr5_-_41510656_41510713	0.0536773	AUGUGCC	ENST00000377801.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chr3_+_62304712_62304732	0.0534891	AUGUGCC	ENST00000494481.1|C3orf14|ENSG00000114405.6|chromosome 3 open reading frame 14
hg19_v2_chr5_+_102455853_102455961	0.0520179	AUGUGCC	ENST00000515845.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000321521.9|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000507921.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2
hg19_v2_chr6_+_105404899_105404931	0.0515197	AUGUGCC	ENST00000345080.4|LIN28B|ENSG00000187772.6|lin-28 homolog B (C. elegans)
hg19_v2_chr17_+_30264014_30264086	0.0495849	AUGUGCC	ENST00000322652.5|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit 	ENST00000580398.1|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit
hg19_v2_chr17_+_57642886_57643006	0.0484605	AUGUGCC	ENST00000251241.4|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000451169.2|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000425628.3|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000584385.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000580030.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg19_v2_chrX_+_41192595_41192651	0.0481048	AUGUGCC	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr12_+_62654119_62654142	0.0463729	AUGUGCC	ENST00000353364.3|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000549523.1|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000280377.5|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15
hg19_v2_chr7_+_102715315_102715380	0.0456103	AUGUGCC	ENST00000428183.2|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000323716.3|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000441711.2|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000454559.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000425331.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000541300.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10
hg19_v2_chr11_+_9406169_9406210	0.0454703	AUGUGCC	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr12_+_104458235_104458344	0.0439737	AUGUGCC	ENST00000229330.4|HCFC2|ENSG00000111727.7|host cell factor C2
hg19_v2_chr18_+_12658185_12658200	0.0424571	AUGUGCC	ENST00000400514.2|AP005482.1|ENSG00000215527.3|Uncharacterized protein
hg19_v2_chr5_+_118407053_118407239	0.0421078	AUGUGCC	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr4_+_39699664_39699772	0.0405984	AUGUGCC	ENST00000261427.5|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000510934.1|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000295963.6|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K
hg19_v2_chr3_-_176914238_176914277	0.0400941	AUGUGCC	ENST00000430069.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1 	ENST00000428970.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1
hg19_v2_chr6_-_146135880_146135952	0.0376195	AUGUGCC	ENST00000237281.4|FBXO30|ENSG00000118496.4|F-box protein 30
hg19_v2_chr10_-_15210666_15210707	0.0340526	AUGUGCC	ENST00000378165.4|NMT2|ENSG00000152465.13|N-myristoyltransferase 2
hg19_v2_chr4_+_41937131_41937211	0.0328106	AUGUGCC	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr1_-_173991434_173991556	0.0303024	AUGUGCC	ENST00000367696.2|RC3H1|ENSG00000135870.7|ring finger and CCCH-type domains 1
hg19_v2_chr1_+_36771946_36771994	0.0265243	AUGUGCC	ENST00000373139.2|SH3D21|ENSG00000214193.5|SH3 domain containing 21 	ENST00000453908.2|SH3D21|ENSG00000214193.5|SH3 domain containing 21 	ENST00000426732.2|SH3D21|ENSG00000214193.5|SH3 domain containing 21
hg19_v2_chr13_-_50367057_50367142	0.0264957	AUGUGCC	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr5_+_82767284_82767310	0.0241705	AUGUGCC	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr15_+_63796779_63796863	0.02255	AUGUGCC	ENST00000561442.1|USP3|ENSG00000140455.12|ubiquitin specific peptidase 3 	ENST00000560070.1|USP3|ENSG00000140455.12|ubiquitin specific peptidase 3 	ENST00000540797.1|USP3|ENSG00000140455.12|ubiquitin specific peptidase 3 	ENST00000380324.3|USP3|ENSG00000140455.12|ubiquitin specific peptidase 3 	ENST00000268049.7|USP3|ENSG00000140455.12|ubiquitin specific peptidase 3 	ENST00000536001.1|USP3|ENSG00000140455.12|ubiquitin specific peptidase 3 	ENST00000539772.1|USP3|ENSG00000140455.12|ubiquitin specific peptidase 3
hg19_v2_chr12_-_100536608_100536667	0.0214514	AUGUGCC	ENST00000356828.3|UHRF1BP1L|ENSG00000111647.8|UHRF1 binding protein 1-like 	ENST00000279907.7|UHRF1BP1L|ENSG00000111647.8|UHRF1 binding protein 1-like
hg19_v2_chr2_-_202316260_202316308	0.0203526	AUGUGCC	ENST00000332624.3|TRAK2|ENSG00000115993.7|trafficking protein, kinesin binding 2
hg19_v2_chr2_-_164592497_164592573	0.0193122	AUGUGCC	ENST00000333129.3|FIGN|ENSG00000182263.9|fidgetin 	ENST00000409634.1|FIGN|ENSG00000182263.9|fidgetin
hg19_v2_chr12_+_124069070_124069106	0.0187449	AUGUGCC	ENST00000262225.3|TMED2|ENSG00000086598.6|transmembrane emp24 domain trafficking protein 2 	ENST00000438031.2|TMED2|ENSG00000086598.6|transmembrane emp24 domain trafficking protein 2
hg19_v2_chr18_+_63418068_63418157	0.0162115	AUGUGCC	ENST00000397968.2|CDH7|ENSG00000081138.9|cadherin 7, type 2
hg19_v2_chr4_-_170924888_170924950	0.0151011	AUGUGCC	ENST00000502832.1|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like 	ENST00000393704.3|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like
hg19_v2_chr15_-_56535464_56535521	0.0139348	AUGUGCC	ENST00000559447.2|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000422057.1|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000317318.6|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000423270.1|RFX7|ENSG00000181827.10|regulatory factor X, 7
hg19_v2_chrX_+_40944871_40944888	0.0138616	AUGUGCC	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr8_+_61429416_61429502	0.0134431	AUGUGCC	ENST00000262646.7|RAB2A|ENSG00000104388.10|RAB2A, member RAS oncogene family 	ENST00000531289.1|RAB2A|ENSG00000104388.10|RAB2A, member RAS oncogene family
hg19_v2_chr7_+_23338819_23338973	0.0131068	AUGUGCC	ENST00000466681.1|MALSU1|ENSG00000156928.4|mitochondrial assembly of ribosomal large subunit 1
hg19_v2_chr13_-_52027134_52027343	0.0128204	AUGUGCC	ENST00000311234.4|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000425000.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000463928.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000442263.3|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000398119.2|INTS6|ENSG00000102786.10|integrator complex subunit 6
hg19_v2_chr12_-_94853716_94853738	0.011639	AUGUGCC	ENST00000339839.5|CCDC41|ENSG00000173588.10|coiled-coil domain containing 41 	ENST00000397809.5|CCDC41|ENSG00000173588.10|coiled-coil domain containing 41 	ENST00000547575.1|CCDC41|ENSG00000173588.10|coiled-coil domain containing 41
hg19_v2_chr17_-_62658186_62658231	0.0106973	AUGUGCC	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr7_+_65338230_65338293	0.00957112	AUGUGCC	ENST00000360768.3|VKORC1L1|ENSG00000196715.5|vitamin K epoxide reductase complex, subunit 1-like 1
hg19_v2_chr21_-_16437255_16437340	0.00954721	AUGUGCC	ENST00000400199.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1 	ENST00000400202.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1
hg19_v2_chrX_+_44732757_44732860	0.00887935	AUGUGCC	ENST00000377967.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000536777.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000382899.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000543216.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A
hg19_v2_chr9_-_74980113_74980163	0.00793956	AUGUGCC	ENST00000376962.5|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000376960.4|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000237937.3|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5
hg19_v2_chr1_-_118472216_118472262	0.00749306	AUGUGCC	ENST00000369443.5|GDAP2|ENSG00000196505.6|ganglioside induced differentiation associated protein 2
hg19_v2_chr17_+_48796905_48797008	0.007436	AUGUGCC	ENST00000505658.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000393227.2|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000240304.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000311571.3|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000505619.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000544170.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000510984.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae)
hg19_v2_chr17_-_5389477_5389537	0.00735617	AUGUGCC	ENST00000572834.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000570848.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000571971.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000158771.4|DERL2|ENSG00000072849.6|derlin 2
hg19_v2_chr6_+_89790490_89790506	0.00628632	AUGUGCC	ENST00000336032.3|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr10_+_20105157_20105184	0.00514307	AUGUGCC	ENST00000377242.3|PLXDC2|ENSG00000120594.12|plexin domain containing 2 	ENST00000377252.4|PLXDC2|ENSG00000120594.12|plexin domain containing 2
hg19_v2_chr5_-_132073210_132073330	0.00422316	AUGUGCC	ENST00000378735.1|KIF3A|ENSG00000131437.11|kinesin family member 3A 	ENST00000378746.4|KIF3A|ENSG00000131437.11|kinesin family member 3A
hg19_v2_chr1_+_193091080_193091222	0.00413049	AUGUGCC	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr1_+_212458834_212458896	0.00373035	AUGUGCC	ENST00000261461.2|PPP2R5A|ENSG00000066027.7|protein phosphatase 2, regulatory subunit B', alpha
hg19_v2_chr6_-_99873145_99873207	0.00335079	AUGUGCC	ENST00000369239.5|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein 	ENST00000438806.1|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein
hg19_v2_chr12_+_12870055_12870119	0.00269953	AUGUGCC	ENST00000228872.4|CDKN1B|ENSG00000111276.6|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg19_v2_chr19_+_1752372_1752372	0.00262908	AUGUGCC	ENST00000382349.4|ONECUT3|ENSG00000205922.4|one cut homeobox 3
hg19_v2_chr15_-_30114622_30114706	0.00157087	AUGUGCC	ENST00000495972.2|TJP1|ENSG00000104067.12|tight junction protein 1 	ENST00000346128.6|TJP1|ENSG00000104067.12|tight junction protein 1
hg19_v2_chr14_-_39901618_39901704	0.00138364	AUGUGCC	ENST00000554932.1|FBXO33|ENSG00000165355.7|F-box protein 33 	ENST00000298097.7|FBXO33|ENSG00000165355.7|F-box protein 33
hg19_v2_chr14_-_21737610_21737653	0.001252	AUGUGCC	ENST00000320084.7|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000449098.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000336053.6|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2)
hg19_v2_chr12_+_94542459_94542513	0.00108866	AUGUGCC	ENST00000258526.4|PLXNC1|ENSG00000136040.4|plexin C1
hg19_v2_chr14_-_90085458_90085557	0.00101078	AUGUGCC	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr6_+_151186554_151186691	0.000970258	AUGUGCC	ENST00000367321.3|MTHFD1L|ENSG00000120254.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 	ENST00000367307.4|MTHFD1L|ENSG00000120254.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
hg19_v2_chr5_+_173315283_173315335	0.000333577	AUGUGCC	ENST00000265085.5|CPEB4|ENSG00000113742.8|cytoplasmic polyadenylation element binding protein 4
hg19_v2_chr4_-_48908805_48908821	0.000220329	AUGUGCC	ENST00000273860.4|OCIAD2|ENSG00000145247.7|OCIA domain containing 2
