hg19_v2_chrM_+_8366_8398	0.590633	AIRE	ENST00000361851.1|MT-ATP8|ENSG00000228253.1|mitochondrially encoded ATP synthase 8
hg19_v2_chr1_+_79115503_79115530	0.565206	AIRE	ENST00000370747.4|IFI44|ENSG00000137965.6|interferon-induced protein 44 	ENST00000438486.1|IFI44|ENSG00000137965.6|interferon-induced protein 44 	ENST00000545124.1|IFI44|ENSG00000137965.6|interferon-induced protein 44
hg19_v2_chr2_+_38177575_38177612	0.533298	AIRE	ENST00000407257.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000417700.2|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000234195.3|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000442857.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2
hg19_v2_chr16_+_56672571_56672587	0.445775	AIRE	ENST00000290705.8|MT1A|ENSG00000205362.6|metallothionein 1A
hg19_v2_chr11_+_45376922_45377052	0.436958	AIRE	ENST00000524410.1|RP11-430H10.1|ENSG00000254427.1|RP11-430H10.1	ENST00000524488.1|RP11-430H10.1|ENSG00000254427.1|RP11-430H10.1	ENST00000524565.1|RP11-430H10.1|ENSG00000254427.1|RP11-430H10.1
hg19_v2_chr7_-_64023441_64023484	0.421618	AIRE	ENST00000309683.6|ZNF680|ENSG00000173041.7|zinc finger protein 680
hg19_v2_chr6_+_26104104_26104169	0.411153	AIRE	ENST00000377803.2|HIST1H4C|ENSG00000197061.3|histone cluster 1, H4c
hg19_v2_chr17_-_39150385_39150417	0.373269	AIRE	ENST00000391586.1|KRTAP3-3|ENSG00000212899.1|keratin associated protein 3-3
hg19_v2_chr5_-_38845812_38845931	0.355572	AIRE	ENST00000513480.1|CTD-2127H9.1|ENSG00000249740.1|CTD-2127H9.1	ENST00000512519.1|CTD-2127H9.1|ENSG00000249740.1|CTD-2127H9.1
hg19_v2_chrM_+_7586_7655	0.326345	AIRE	ENST00000361739.1|MT-CO2|ENSG00000198712.1|mitochondrially encoded cytochrome c oxidase II
hg19_v2_chr4_-_104119528_104119570	0.308643	AIRE	ENST00000380026.3|CENPE|ENSG00000138778.7|centromere protein E, 312kDa 	ENST00000503705.1|CENPE|ENSG00000138778.7|centromere protein E, 312kDa 	ENST00000265148.3|CENPE|ENSG00000138778.7|centromere protein E, 312kDa
hg19_v2_chrM_+_14741_14767	0.302047	AIRE	ENST00000361789.2|MT-CYB|ENSG00000198727.2|mitochondrially encoded cytochrome b
hg19_v2_chr16_+_50059182_50059199	0.287232	AIRE	ENST00000562576.1|CNEP1R1|ENSG00000205423.7|CTD nuclear envelope phosphatase 1 regulatory subunit 1
hg19_v2_chr22_+_36649170_36649207	0.281101	AIRE	ENST00000438034.1|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000427990.1|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000347595.7|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000397279.4|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000433768.1|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000440669.2|APOL1|ENSG00000100342.16|apolipoprotein L, 1
hg19_v2_chr14_-_55658323_55658396	0.272101	AIRE	ENST00000554067.1|DLGAP5|ENSG00000126787.8|discs, large (Drosophila) homolog-associated protein 5 	ENST00000247191.2|DLGAP5|ENSG00000126787.8|discs, large (Drosophila) homolog-associated protein 5
hg19_v2_chr6_-_127663543_127663559	0.250902	AIRE	ENST00000531582.1|ECHDC1|ENSG00000093144.14|enoyl CoA hydratase domain containing 1
hg19_v2_chr22_+_25202232_25202286	0.243196	AIRE	ENST00000400358.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1 	ENST00000400359.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1
hg19_v2_chr14_-_55658252_55658321	0.232468	AIRE	ENST00000395425.2|DLGAP5|ENSG00000126787.8|discs, large (Drosophila) homolog-associated protein 5
hg19_v2_chr19_-_52551814_52552023	0.227498	AIRE	ENST00000594154.1|ZNF432|ENSG00000256087.2|zinc finger protein 432 	ENST00000598745.1|ZNF432|ENSG00000256087.2|zinc finger protein 432 	ENST00000597273.1|ZNF432|ENSG00000256087.2|zinc finger protein 432
hg19_v2_chr7_+_116451100_116451124	0.226006	AIRE	ENST00000464223.1|CAPZA2|ENSG00000198898.8|capping protein (actin filament) muscle Z-line, alpha 2 	ENST00000484325.1|CAPZA2|ENSG00000198898.8|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v2_chr12_-_76462713_76462773	0.224077	AIRE	ENST00000552056.1|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr6_+_168434678_168434678	0.221686	AIRE	ENST00000496008.1|KIF25|ENSG00000125337.12|kinesin family member 25
hg19_v2_chr11_-_8954491_8954536	0.219355	AIRE	ENST00000526227.1|C11orf16|ENSG00000176029.9|chromosome 11 open reading frame 16 	ENST00000525780.1|C11orf16|ENSG00000176029.9|chromosome 11 open reading frame 16 	ENST00000326053.5|C11orf16|ENSG00000176029.9|chromosome 11 open reading frame 16
hg19_v2_chr6_-_31514516_31514625	0.216059	AIRE	ENST00000303892.5|ATP6V1G2|ENSG00000213760.6|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2 	ENST00000483251.1|ATP6V1G2|ENSG00000213760.6|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2
hg19_v2_chr10_-_4720333_4720350	0.214947	AIRE	ENST00000430998.2|LINC00704|ENSG00000231298.2|long intergenic non-protein coding RNA 704
hg19_v2_chr7_+_142374104_142374104	0.210563	AIRE	ENST00000604952.1|MTRNR2L6|ENSG00000270672.1|MT-RNR2-like 6
hg19_v2_chr1_-_154600421_154600480	0.204917	AIRE	ENST00000368471.3|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific 	ENST00000292205.5|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific
hg19_v2_chr12_+_20963647_20963666	0.204161	AIRE	ENST00000381545.3|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3
hg19_v2_chr19_-_23869970_23869991	0.203513	AIRE	ENST00000601010.1|ZNF675|ENSG00000197372.5|zinc finger protein 675
hg19_v2_chr11_+_6947647_6947698	0.201834	AIRE	ENST00000278319.5|ZNF215|ENSG00000149054.10|zinc finger protein 215
hg19_v2_chr4_-_47465666_47465736	0.197218	AIRE	ENST00000381571.4|COMMD8|ENSG00000169019.9|COMM domain containing 8
hg19_v2_chr6_-_106773610_106773700	0.175674	AIRE	ENST00000369076.3|ATG5|ENSG00000057663.8|autophagy related 5 	ENST00000369070.1|ATG5|ENSG00000057663.8|autophagy related 5
hg19_v2_chr4_+_76649797_76650004	0.174465	AIRE	ENST00000538159.1|USO1|ENSG00000138768.10|USO1 vesicle transport factor 	ENST00000514213.2|USO1|ENSG00000138768.10|USO1 vesicle transport factor
hg19_v2_chr14_+_45605157_45605186	0.173995	AIRE	ENST00000542564.2|FANCM|ENSG00000187790.6|Fanconi anemia, complementation group M
hg19_v2_chr5_+_118691008_118691149	0.172816	AIRE	ENST00000504642.1|TNFAIP8|ENSG00000145779.7|tumor necrosis factor, alpha-induced protein 8
hg19_v2_chr14_+_45605127_45605155	0.172096	AIRE	ENST00000556036.1|FANCM|ENSG00000187790.6|Fanconi anemia, complementation group M 	ENST00000267430.5|FANCM|ENSG00000187790.6|Fanconi anemia, complementation group M
hg19_v2_chrM_+_12331_12348	0.169306	AIRE	ENST00000361567.2|MT-ND5|ENSG00000198786.2|mitochondrially encoded NADH dehydrogenase 5
hg19_v2_chrM_-_14670_14676	0.167753	AIRE	ENST00000361681.2|MT-ND6|ENSG00000198695.2|mitochondrially encoded NADH dehydrogenase 6
hg19_v2_chrM_+_5824_5904	0.166927	AIRE	ENST00000361624.2|MT-CO1|ENSG00000198804.2|mitochondrially encoded cytochrome c oxidase I
hg19_v2_chr5_+_32788945_32788945	0.166054	AIRE	ENST00000326958.1|AC026703.1|ENSG00000181495.1|AC026703.1
hg19_v2_chrM_+_4431_4475	0.162066	AIRE	ENST00000361453.3|MT-ND2|ENSG00000198763.3|mitochondrially encoded NADH dehydrogenase 2
hg19_v2_chr1_-_52344416_52344427	0.161457	AIRE	ENST00000544028.1|NRD1|ENSG00000078618.15|nardilysin (N-arginine dibasic convertase)
hg19_v2_chr16_+_75182376_75182480	0.161097	AIRE	ENST00000570010.1|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000568079.1|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000464850.1|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000332307.4|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000393430.2|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein
hg19_v2_chr16_-_31147020_31147083	0.159903	AIRE	ENST00000568261.1|PRSS8|ENSG00000052344.11|protease, serine, 8 	ENST00000567797.1|PRSS8|ENSG00000052344.11|protease, serine, 8 	ENST00000317508.6|PRSS8|ENSG00000052344.11|protease, serine, 8
hg19_v2_chr8_+_104384616_104384661	0.153611	AIRE	ENST00000520337.1|CTHRC1|ENSG00000164932.8|collagen triple helix repeat containing 1
hg19_v2_chr12_+_75874460_75874549	0.147546	AIRE	ENST00000266659.3|GLIPR1|ENSG00000139278.5|GLI pathogenesis-related 1
hg19_v2_chr6_-_31514333_31514414	0.145697	AIRE	ENST00000376151.4|ATP6V1G2|ENSG00000213760.6|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2
hg19_v2_chr3_-_19975665_19975719	0.142446	AIRE	ENST00000295824.9|EFHB|ENSG00000163576.13|EF-hand domain family, member B 	ENST00000389256.4|EFHB|ENSG00000163576.13|EF-hand domain family, member B
hg19_v2_chr14_+_58894706_58894720	0.14021	AIRE	ENST00000261244.5|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr2_-_166810261_166810353	0.139396	AIRE	ENST00000243344.7|TTC21B|ENSG00000123607.10|tetratricopeptide repeat domain 21B
hg19_v2_chr4_-_114682719_114682746	0.128519	AIRE	ENST00000394522.3|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta
hg19_v2_chr19_-_16606988_16607003	0.127936	AIRE	ENST00000269881.3|CALR3|ENSG00000269058.1|calreticulin 3
hg19_v2_chr5_+_72143988_72144011	0.125797	AIRE	ENST00000506351.2|TNPO1|ENSG00000083312.13|transportin 1
hg19_v2_chr19_-_48753028_48753043	0.121577	AIRE	ENST00000522431.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr11_+_94038759_94038822	0.119753	AIRE	ENST00000440961.2|FOLR4|ENSG00000183560.4|folate receptor 4, delta (putative) 	ENST00000328458.4|FOLR4|ENSG00000183560.4|folate receptor 4, delta (putative)
hg19_v2_chr4_-_4544061_4544075	0.118879	AIRE	ENST00000507908.1|STX18|ENSG00000168818.5|syntaxin 18
hg19_v2_chr1_-_161208013_161208092	0.117368	AIRE	ENST00000515452.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367983.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr1_+_198189921_198189940	0.115501	AIRE	ENST00000391974.3|NEK7|ENSG00000151414.10|NIMA-related kinase 7
hg19_v2_chr15_+_83209620_83209620	0.112973	AIRE	ENST00000568285.1|RP11-379H8.1|ENSG00000261086.1|Uncharacterized protein
hg19_v2_chr15_+_52043758_52043809	0.112186	AIRE	ENST00000249700.4|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal) 	ENST00000539962.2|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal)
hg19_v2_chr8_+_124780672_124780764	0.112017	AIRE	ENST00000521166.1|FAM91A1|ENSG00000176853.11|family with sequence similarity 91, member A1 	ENST00000334705.7|FAM91A1|ENSG00000176853.11|family with sequence similarity 91, member A1
hg19_v2_chr10_-_106240032_106240047	0.110206	AIRE	ENST00000447860.1|RP11-127O4.3|ENSG00000225768.1|RP11-127O4.3
hg19_v2_chr5_+_118690466_118690505	0.109337	AIRE	ENST00000503646.1|TNFAIP8|ENSG00000145779.7|tumor necrosis factor, alpha-induced protein 8
hg19_v2_chr8_+_86851932_86851934	0.108644	AIRE	ENST00000517368.1|CTA-392E5.1|ENSG00000253154.1|CTA-392E5.1
hg19_v2_chr4_+_156775910_156775941	0.106914	AIRE	ENST00000506072.1|TDO2|ENSG00000151790.4|tryptophan 2,3-dioxygenase 	ENST00000507590.1|TDO2|ENSG00000151790.4|tryptophan 2,3-dioxygenase
hg19_v2_chr2_+_172864490_172864490	0.100227	AIRE	ENST00000315796.4|METAP1D|ENSG00000172878.9|methionyl aminopeptidase type 1D (mitochondrial)
hg19_v2_chr15_+_27112948_27113033	0.0996891	AIRE	ENST00000555060.1|GABRA5|ENSG00000186297.7|gamma-aminobutyric acid (GABA) A receptor, alpha 5
hg19_v2_chr12_+_10658489_10658489	0.0994924	AIRE	ENST00000538173.1|EIF2S3L|ENSG00000180574.3|Putative eukaryotic translation initiation factor 2 subunit 3-like protein
hg19_v2_chr12_+_12202785_12202802	0.0966169	AIRE	ENST00000586576.1|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator) 	ENST00000464885.2|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator)
hg19_v2_chr11_+_35211511_35211557	0.0931498	AIRE	ENST00000524922.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group)
hg19_v2_chr21_+_30673091_30673135	0.092927	AIRE	ENST00000447177.1|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr15_+_52043813_52043864	0.0919672	AIRE	ENST00000435126.2|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal)
hg19_v2_chr3_+_88199099_88199154	0.0912956	AIRE	ENST00000486971.1|C3orf38|ENSG00000179021.5|chromosome 3 open reading frame 38
hg19_v2_chr11_-_119249805_119249830	0.0885258	AIRE	ENST00000527843.1|USP2|ENSG00000036672.11|ubiquitin specific peptidase 2
hg19_v2_chr7_-_15601595_15601657	0.0813459	AIRE	ENST00000342526.3|AGMO|ENSG00000187546.9|alkylglycerol monooxygenase
hg19_v2_chr20_+_12989596_12989642	0.0811945	AIRE	ENST00000434210.1|SPTLC3|ENSG00000172296.8|serine palmitoyltransferase, long chain base subunit 3 	ENST00000399002.2|SPTLC3|ENSG00000172296.8|serine palmitoyltransferase, long chain base subunit 3
hg19_v2_chr4_+_66536248_66536345	0.0796987	AIRE	ENST00000514260.1|RP11-807H7.1|ENSG00000250846.2|RP11-807H7.1	ENST00000507117.1|RP11-807H7.1|ENSG00000250846.2|RP11-807H7.1
hg19_v2_chr9_-_4666421_4666492	0.0794122	AIRE	ENST00000381895.5|SPATA6L|ENSG00000106686.12|spermatogenesis associated 6-like
hg19_v2_chr20_+_21284416_21284490	0.078713	AIRE	ENST00000539513.1|XRN2|ENSG00000088930.6|5'-3' exoribonuclease 2
hg19_v2_chr2_-_202508169_202508263	0.0783991	AIRE	ENST00000409883.2|TMEM237|ENSG00000155755.14|transmembrane protein 237
hg19_v2_chr2_-_127977654_127977654	0.077565	AIRE	ENST00000409327.1|CYP27C1|ENSG00000186684.8|cytochrome P450, family 27, subfamily C, polypeptide 1
hg19_v2_chr16_+_50059125_50059180	0.0765179	AIRE	ENST00000427478.2|CNEP1R1|ENSG00000205423.7|CTD nuclear envelope phosphatase 1 regulatory subunit 1
hg19_v2_chr1_+_100810575_100810584	0.0757812	AIRE	ENST00000542213.1|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr18_-_37380230_37380283	0.075601	AIRE	ENST00000591629.1|LINC00669|ENSG00000267374.1|long intergenic non-protein coding RNA 669
hg19_v2_chr15_-_52043631_52043657	0.0741568	AIRE	ENST00000558126.1|LYSMD2|ENSG00000140280.9|LysM, putative peptidoglycan-binding, domain containing 2
hg19_v2_chr1_-_145826450_145826450	0.0741206	AIRE	ENST00000462900.2|GPR89A|ENSG00000117262.14|G protein-coupled receptor 89A
hg19_v2_chr19_+_45417921_45417970	0.0740749	AIRE	ENST00000252491.4|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000592885.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000589781.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr6_+_26538566_26538647	0.0731281	AIRE	ENST00000377575.2|HMGN4|ENSG00000182952.4|high mobility group nucleosomal binding domain 4
hg19_v2_chr19_-_36643329_36643407	0.0722126	AIRE	ENST00000589154.1|COX7A1|ENSG00000161281.6|cytochrome c oxidase subunit VIIa polypeptide 1 (muscle)
hg19_v2_chr22_+_36649056_36649164	0.0720927	AIRE	ENST00000397278.3|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000422706.1|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000426053.1|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000319136.4|APOL1|ENSG00000100342.16|apolipoprotein L, 1
hg19_v2_chr20_+_44036620_44036658	0.0703982	AIRE	ENST00000372710.3|DBNDD2|ENSG00000244274.3|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v2_chr6_-_169582835_169582941	0.0687091	AIRE	ENST00000564830.1|RP11-417E7.2|ENSG00000261039.1|RP11-417E7.2
hg19_v2_chr5_+_122181184_122181213	0.0673685	AIRE	ENST00000513881.1|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr9_-_114361919_114361975	0.0637071	AIRE	ENST00000422125.1|PTGR1|ENSG00000106853.12|prostaglandin reductase 1
hg19_v2_chr13_-_46756351_46756459	0.0628882	AIRE	ENST00000323076.2|LCP1|ENSG00000136167.9|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v2_chr16_+_50914085_50914120	0.0627411	AIRE	ENST00000576842.1|CTD-2034I21.2|ENSG00000263082.1|CTD-2034I21.2
hg19_v2_chr19_-_21950362_21950430	0.0626725	AIRE	ENST00000358296.6|ZNF100|ENSG00000197020.6|zinc finger protein 100
hg19_v2_chr9_-_114362093_114362138	0.0590779	AIRE	ENST00000538962.1|PTGR1|ENSG00000106853.12|prostaglandin reductase 1 	ENST00000407693.2|PTGR1|ENSG00000106853.12|prostaglandin reductase 1 	ENST00000238248.3|PTGR1|ENSG00000106853.12|prostaglandin reductase 1
hg19_v2_chr3_-_123710199_123710199	0.0576691	AIRE	ENST00000184183.4|ROPN1|ENSG00000065371.13|rhophilin associated tail protein 1
hg19_v2_chr9_-_114361665_114361719	0.0566751	AIRE	ENST00000309195.5|PTGR1|ENSG00000106853.12|prostaglandin reductase 1
hg19_v2_chr11_-_56310757_56310757	0.0550765	AIRE	ENST00000528616.2|OR5M11|ENSG00000255223.2|olfactory receptor, family 5, subfamily M, member 11
hg19_v2_chr16_+_3254247_3254247	0.0535025	AIRE	ENST00000304646.2|OR1F1|ENSG00000168124.2|olfactory receptor, family 1, subfamily F, member 1
hg19_v2_chr4_-_76649546_76649709	0.0507675	AIRE	ENST00000508510.1|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2 	ENST00000509561.1|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2 	ENST00000499709.2|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2 	ENST00000511868.1|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr4_+_78829479_78829479	0.050699	AIRE	ENST00000504901.1|MRPL1|ENSG00000169288.13|mitochondrial ribosomal protein L1
hg19_v2_chr5_+_140625147_140625147	0.0500851	AIRE	ENST00000231173.3|PCDHB15|ENSG00000113248.3|protocadherin beta 15
hg19_v2_chr12_-_11287243_11287243	0.0500425	AIRE	ENST00000539585.1|TAS2R30|ENSG00000256188.1|taste receptor, type 2, member 30
hg19_v2_chr1_-_161207986_161208000	0.0484042	AIRE	ENST00000506209.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367980.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr2_+_62423242_62423288	0.0469643	AIRE	ENST00000301998.4|B3GNT2|ENSG00000170340.10|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
hg19_v2_chr16_-_31146961_31147017	0.0467715	AIRE	ENST00000567531.1|PRSS8|ENSG00000052344.11|protease, serine, 8
hg19_v2_chr4_-_120222076_120222076	0.0467023	AIRE	ENST00000504110.1|C4orf3|ENSG00000164096.10|chromosome 4 open reading frame 3
hg19_v2_chr2_-_89568263_89568263	0.0466969	AIRE	ENST00000473726.1|IGKV1-33|ENSG00000242076.1|immunoglobulin kappa variable 1-33
hg19_v2_chr3_+_107318157_107318172	0.0466949	AIRE	ENST00000406780.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr9_-_113761720_113761756	0.0450907	AIRE	ENST00000541779.1|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1 	ENST00000374430.2|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr5_-_36242119_36242381	0.0429667	AIRE	ENST00000511088.1|NADK2|ENSG00000152620.8|NAD kinase 2, mitochondrial 	ENST00000282512.3|NADK2|ENSG00000152620.8|NAD kinase 2, mitochondrial 	ENST00000506945.1|NADK2|ENSG00000152620.8|NAD kinase 2, mitochondrial
hg19_v2_chr12_+_7282795_7283047	0.0419668	AIRE	ENST00000266546.6|CLSTN3|ENSG00000139182.9|calsyntenin 3
hg19_v2_chr5_+_122181128_122181144	0.0410236	AIRE	ENST00000261369.4|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chrX_-_102941596_102941746	0.0407748	AIRE	ENST00000441076.2|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000422355.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000442614.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000422154.2|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000451301.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2
hg19_v2_chr17_+_34171081_34171145	0.0400642	AIRE	ENST00000585577.1|TAF15|ENSG00000172660.7|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
hg19_v2_chr4_-_123843597_123843766	0.0387669	AIRE	ENST00000510735.1|NUDT6|ENSG00000170917.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6 	ENST00000304430.5|NUDT6|ENSG00000170917.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6
hg19_v2_chr2_+_179316163_179316163	0.0376572	AIRE	ENST00000409117.3|DFNB59|ENSG00000204311.7|deafness, autosomal recessive 59
hg19_v2_chr17_+_77030267_77030391	0.0373652	AIRE	ENST00000581774.1|C1QTNF1|ENSG00000173918.10|C1q and tumor necrosis factor related protein 1
hg19_v2_chr2_+_1417228_1417252	0.0365619	AIRE	ENST00000382269.3|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000337415.3|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000345913.4|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000346956.3|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000349624.3|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000539820.1|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000329066.4|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000382201.3|TPO|ENSG00000115705.16|thyroid peroxidase
hg19_v2_chr12_+_12202774_12202780	0.0364652	AIRE	ENST00000589718.1|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator)
hg19_v2_chr1_-_52344471_52344481	0.0362357	AIRE	ENST00000352171.7|NRD1|ENSG00000078618.15|nardilysin (N-arginine dibasic convertase) 	ENST00000354831.7|NRD1|ENSG00000078618.15|nardilysin (N-arginine dibasic convertase)
hg19_v2_chr19_+_11455900_11455977	0.0351086	AIRE	ENST00000588790.1|CCDC159|ENSG00000183401.7|coiled-coil domain containing 159
hg19_v2_chr12_-_75603482_75603534	0.0334199	AIRE	ENST00000341669.3|KCNC2|ENSG00000166006.8|potassium voltage-gated channel, Shaw-related subfamily, member 2 	ENST00000298972.1|KCNC2|ENSG00000166006.8|potassium voltage-gated channel, Shaw-related subfamily, member 2 	ENST00000350228.2|KCNC2|ENSG00000166006.8|potassium voltage-gated channel, Shaw-related subfamily, member 2
hg19_v2_chr19_+_45417812_45417869	0.0325182	AIRE	ENST00000592535.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr14_-_65409438_65409479	0.0302662	AIRE	ENST00000557049.1|GPX2|ENSG00000176153.10|glutathione peroxidase 2 (gastrointestinal)
hg19_v2_chr11_-_18956556_18956556	0.0299531	AIRE	ENST00000302797.3|MRGPRX1|ENSG00000170255.6|MAS-related GPR, member X1
hg19_v2_chr7_-_36764142_36764157	0.0282759	AIRE	ENST00000258749.5|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil) 	ENST00000535891.1|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil)
hg19_v2_chr19_-_23869999_23870022	0.0272862	AIRE	ENST00000601935.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000359788.4|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000600313.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000596211.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000599168.1|ZNF675|ENSG00000197372.5|zinc finger protein 675
hg19_v2_chr21_+_39644214_39644219	0.0272728	AIRE	ENST00000438657.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
hg19_v2_chr4_+_71587669_71587752	0.0271525	AIRE	ENST00000381006.3|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3 	ENST00000226328.4|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr7_-_87936195_87936223	0.0265464	AIRE	ENST00000414498.1|STEAP4|ENSG00000127954.8|STEAP family member 4 	ENST00000301959.5|STEAP4|ENSG00000127954.8|STEAP family member 4 	ENST00000380079.4|STEAP4|ENSG00000127954.8|STEAP family member 4
hg19_v2_chrX_-_153192211_153192326	0.0264248	AIRE	ENST00000461052.1|ARHGAP4|ENSG00000089820.11|Rho GTPase activating protein 4 	ENST00000422091.1|ARHGAP4|ENSG00000089820.11|Rho GTPase activating protein 4
hg19_v2_chr1_-_167883327_167883352	0.0258557	AIRE	ENST00000476818.2|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble) 	ENST00000367851.4|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble) 	ENST00000367848.1|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble)
hg19_v2_chr16_-_71518504_71518542	0.0250889	AIRE	ENST00000565100.2|ZNF19|ENSG00000157429.11|zinc finger protein 19
hg19_v2_chr19_+_45418067_45418126	0.023872	AIRE	ENST00000589078.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000586638.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr12_-_50677255_50677329	0.0235687	AIRE	ENST00000551691.1|LIMA1|ENSG00000050405.9|LIM domain and actin binding 1 	ENST00000394943.3|LIMA1|ENSG00000050405.9|LIM domain and actin binding 1 	ENST00000341247.4|LIMA1|ENSG00000050405.9|LIM domain and actin binding 1
hg19_v2_chr4_-_66536196_66536216	0.0232661	AIRE	ENST00000511294.1|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr15_-_52043722_52043782	0.0230766	AIRE	ENST00000454181.2|LYSMD2|ENSG00000140280.9|LysM, putative peptidoglycan-binding, domain containing 2
hg19_v2_chr10_+_90660832_90660832	0.0226391	AIRE	ENST00000371924.1|STAMBPL1|ENSG00000138134.7|STAM binding protein-like 1
hg19_v2_chr2_-_166060552_166060566	0.0213377	AIRE	ENST00000283254.7|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit 	ENST00000453007.1|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr19_-_52552051_52552113	0.0212527	AIRE	ENST00000221315.5|ZNF432|ENSG00000256087.2|zinc finger protein 432
hg19_v2_chr14_-_106668095_106668116	0.0211567	AIRE	ENST00000390606.2|IGHV3-20|ENSG00000211946.2|immunoglobulin heavy variable 3-20
hg19_v2_chr12_+_48516463_48516503	0.0210639	AIRE	ENST00000546465.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle
hg19_v2_chr9_-_21482312_21482312	0.0189486	AIRE	ENST00000448696.3|IFNE|ENSG00000184995.6|interferon, epsilon
hg19_v2_chr3_-_121468602_121468617	0.0175977	AIRE	ENST00000340645.5|GOLGB1|ENSG00000173230.11|golgin B1
hg19_v2_chr7_+_20686946_20686966	0.0153015	AIRE	ENST00000443026.2|ABCB5|ENSG00000004846.12|ATP-binding cassette, sub-family B (MDR/TAP), member 5 	ENST00000406935.1|ABCB5|ENSG00000004846.12|ATP-binding cassette, sub-family B (MDR/TAP), member 5
hg19_v2_chr12_-_64784471_64784503	0.0138042	AIRE	ENST00000333722.5|C12orf56|ENSG00000185306.8|chromosome 12 open reading frame 56
hg19_v2_chr4_-_16085657_16085668	0.0137831	AIRE	ENST00000543373.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chr21_+_30672433_30672464	0.0133518	AIRE	ENST00000451655.1|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr6_-_33266687_33266728	0.0129584	AIRE	ENST00000444031.2|RGL2|ENSG00000237441.5|ral guanine nucleotide dissociation stimulator-like 2
hg19_v2_chr19_-_16606930_16606963	0.011003	AIRE	ENST00000600762.1|CALR3|ENSG00000269058.1|calreticulin 3
hg19_v2_chr19_+_56751773_56751773	0.0100649	AIRE	ENST00000600684.1|ZSCAN5D|ENSG00000267908.1|zinc finger and SCAN domain containing 5D
hg19_v2_chr8_-_7220490_7220490	0.00998381	AIRE	ENST00000400078.2|ZNF705G|ENSG00000215372.5|zinc finger protein 705G
hg19_v2_chr3_-_121264848_121264859	0.008949	AIRE	ENST00000264233.5|POLQ|ENSG00000051341.9|polymerase (DNA directed), theta
hg19_v2_chr4_-_57524061_57524074	0.00863847	AIRE	ENST00000508121.1|HOPX|ENSG00000171476.17|HOP homeobox
hg19_v2_chr1_+_207669573_207669606	0.00849315	AIRE	ENST00000400960.2|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000534202.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr12_+_20848486_20848542	0.0084355	AIRE	ENST00000545102.1|SLCO1C1|ENSG00000139155.4|solute carrier organic anion transporter family, member 1C1
hg19_v2_chrX_-_100307043_100307072	0.00784289	AIRE	ENST00000372939.1|TRMT2B|ENSG00000188917.10|tRNA methyltransferase 2 homolog B (S. cerevisiae) 	ENST00000372935.1|TRMT2B|ENSG00000188917.10|tRNA methyltransferase 2 homolog B (S. cerevisiae) 	ENST00000372936.3|TRMT2B|ENSG00000188917.10|tRNA methyltransferase 2 homolog B (S. cerevisiae)
hg19_v2_chr21_+_39644395_39644454	0.00708382	AIRE	ENST00000398934.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
hg19_v2_chr8_+_54764346_54764460	0.00697247	AIRE	ENST00000297313.3|RGS20|ENSG00000147509.9|regulator of G-protein signaling 20 	ENST00000344277.6|RGS20|ENSG00000147509.9|regulator of G-protein signaling 20
hg19_v2_chr3_-_33686925_33687000	0.00544044	AIRE	ENST00000485378.2|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000313350.6|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000487200.1|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr4_-_120243545_120243562	0.00452103	AIRE	ENST00000274024.3|FABP2|ENSG00000145384.3|fatty acid binding protein 2, intestinal
hg19_v2_chr21_+_39644172_39644185	0.00405428	AIRE	ENST00000398932.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
hg19_v2_chr16_+_72088376_72088537	0.00364746	AIRE	ENST00000570083.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000355906.5|HP|ENSG00000257017.4|haptoglobin 	ENST00000398131.2|HP|ENSG00000257017.4|haptoglobin 	ENST00000569639.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000356967.5|HPR|ENSG00000261701.2|haptoglobin-related protein 	ENST00000564499.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000357763.4|HP|ENSG00000257017.4|haptoglobin 	ENST00000562526.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000565574.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000568417.2|HP|ENSG00000257017.4|haptoglobin
hg19_v2_chr5_-_107703556_107703655	0.00360499	AIRE	ENST00000496714.1|FBXL17|ENSG00000145743.11|F-box and leucine-rich repeat protein 17
hg19_v2_chr15_-_38519066_38519111	0.00356554	AIRE	ENST00000561320.1|RP11-346D14.1|ENSG00000259380.1|RP11-346D14.1	ENST00000561161.1|RP11-346D14.1|ENSG00000259380.1|RP11-346D14.1
hg19_v2_chrX_-_153191708_153191767	0.00322928	AIRE	ENST00000393721.1|ARHGAP4|ENSG00000089820.11|Rho GTPase activating protein 4 	ENST00000370028.3|ARHGAP4|ENSG00000089820.11|Rho GTPase activating protein 4
hg19_v2_chr16_-_89119355_89119388	0.00287821	AIRE	ENST00000537498.1|CTD-2555A7.2|ENSG00000256982.1|CTD-2555A7.2
hg19_v2_chr19_-_48752812_48752925	0.00272471	AIRE	ENST00000359009.4|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr3_-_121468513_121468599	0.00193941	AIRE	ENST00000494517.1|GOLGB1|ENSG00000173230.11|golgin B1 	ENST00000393667.3|GOLGB1|ENSG00000173230.11|golgin B1
hg19_v2_chr17_+_36452989_36453152	0.000460776	AIRE	ENST00000312513.5|MRPL45|ENSG00000174100.5|mitochondrial ribosomal protein L45 	ENST00000582535.1|MRPL45|ENSG00000174100.5|mitochondrial ribosomal protein L45
hg19_v2_chr9_+_90112117_90112164	0.000399328	AIRE	ENST00000358077.5|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr8_-_141728444_141728461	2.84127e-05	AIRE	ENST00000521562.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2
