hg19_v2_chr3_+_88188254_88188254	0.717163	ACAGUAC	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr5_-_59189545_59189625	0.685171	ACAGUAC	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr15_-_35280426_35280503	0.666935	ACAGUAC	ENST00000559564.1|ZNF770|ENSG00000198146.4|zinc finger protein 770 	ENST00000356321.4|ZNF770|ENSG00000198146.4|zinc finger protein 770
hg19_v2_chr14_-_57735528_57735726	0.658498	ACAGUAC	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr18_-_19180681_19180711	0.63017	ACAGUAC	ENST00000269214.5|ESCO1|ENSG00000141446.6|establishment of sister chromatid cohesion N-acetyltransferase 1
hg19_v2_chr2_+_198380289_198380305	0.607578	ACAGUAC	ENST00000233892.4|MOB4|ENSG00000115540.10|MOB family member 4, phocein 	ENST00000409916.1|MOB4|ENSG00000115540.10|MOB family member 4, phocein
hg19_v2_chr2_+_46926048_46926095	0.557547	ACAGUAC	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr12_+_69004619_69004699	0.519432	ACAGUAC	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chr4_-_76598296_76598318	0.517309	ACAGUAC	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr5_-_82373260_82373315	0.493698	ACAGUAC	ENST00000502346.1|TMEM167A|ENSG00000174695.5|transmembrane protein 167A
hg19_v2_chr11_-_95657231_95657459	0.493206	ACAGUAC	ENST00000409459.1|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000352297.7|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000393223.3|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000346299.5|MTMR2|ENSG00000087053.14|myotubularin related protein 2
hg19_v2_chr2_+_46769798_46769867	0.487666	ACAGUAC	ENST00000238738.4|RHOQ|ENSG00000119729.6|ras homolog family member Q
hg19_v2_chr1_-_186649543_186649563	0.472346	ACAGUAC	ENST00000367468.5|PTGS2|ENSG00000073756.7|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr15_+_52311398_52311461	0.463209	ACAGUAC	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr9_-_6015607_6015634	0.460967	ACAGUAC	ENST00000259569.5|RANBP6|ENSG00000137040.8|RAN binding protein 6
hg19_v2_chr21_+_35445827_35445886	0.455615	ACAGUAC	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chr9_-_102861267_102861322	0.437879	ACAGUAC	ENST00000262455.6|ERP44|ENSG00000023318.7|endoplasmic reticulum protein 44
hg19_v2_chr12_+_104359576_104359601	0.430023	ACAGUAC	ENST00000392872.3|TDG|ENSG00000139372.10|thymine-DNA glycosylase 	ENST00000436021.2|TDG|ENSG00000139372.10|thymine-DNA glycosylase
hg19_v2_chr5_+_32585605_32585706	0.423066	ACAGUAC	ENST00000265073.4|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000515355.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000502897.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000510442.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae)
hg19_v2_chr12_-_76478686_76478813	0.420677	ACAGUAC	ENST00000261182.8|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr11_+_86748863_86748948	0.419639	ACAGUAC	ENST00000340353.7|TMEM135|ENSG00000166575.12|transmembrane protein 135
hg19_v2_chrX_+_123095155_123095179	0.402809	ACAGUAC	ENST00000371160.1|STAG2|ENSG00000101972.14|stromal antigen 2 	ENST00000435103.1|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chrY_+_15016725_15016769	0.39442	ACAGUAC	ENST00000336079.3|DDX3Y|ENSG00000067048.12|DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
hg19_v2_chr21_-_15755446_15755508	0.389761	ACAGUAC	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr14_-_53162361_53162513	0.387872	ACAGUAC	ENST00000395686.3|ERO1L|ENSG00000197930.8|ERO1-like (S. cerevisiae)
hg19_v2_chr4_-_105416039_105416065	0.385108	ACAGUAC	ENST00000394767.2|CXXC4|ENSG00000168772.9|CXXC finger protein 4
hg19_v2_chrX_-_77041685_77041716	0.373924	ACAGUAC	ENST00000373344.5|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked 	ENST00000395603.3|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked
hg19_v2_chr17_+_30469473_30469556	0.371332	ACAGUAC	ENST00000333942.6|RHOT1|ENSG00000126858.12|ras homolog family member T1 	ENST00000358365.3|RHOT1|ENSG00000126858.12|ras homolog family member T1 	ENST00000583994.1|RHOT1|ENSG00000126858.12|ras homolog family member T1 	ENST00000545287.2|RHOT1|ENSG00000126858.12|ras homolog family member T1
hg19_v2_chr2_+_60983361_60983418	0.364148	ACAGUAC	ENST00000238714.3|PAPOLG|ENSG00000115421.8|poly(A) polymerase gamma
hg19_v2_chr5_-_132299313_132299334	0.36034	ACAGUAC	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr14_-_64010046_64010107	0.359528	ACAGUAC	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr15_-_52970820_52970960	0.355886	ACAGUAC	ENST00000261844.7|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A 	ENST00000399202.4|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A 	ENST00000562135.1|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A
hg19_v2_chr9_-_115095883_115095947	0.355159	ACAGUAC	ENST00000450374.1|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000374255.2|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000334318.6|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000374257.1|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3
hg19_v2_chr12_-_42632016_42632089	0.342818	ACAGUAC	ENST00000442791.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000327791.4|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000534854.2|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380788.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380790.4|YAF2|ENSG00000015153.10|YY1 associated factor 2
hg19_v2_chr8_+_125486939_125487026	0.339892	ACAGUAC	ENST00000303545.3|RNF139|ENSG00000170881.4|ring finger protein 139
hg19_v2_chr3_+_107241783_107241850	0.339024	ACAGUAC	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chrX_+_41192595_41192651	0.336016	ACAGUAC	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr10_-_98346801_98346812	0.328206	ACAGUAC	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr1_-_85156216_85156240	0.325482	ACAGUAC	ENST00000342203.3|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein 	ENST00000370612.4|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein
hg19_v2_chr11_+_85956182_85956289	0.323229	ACAGUAC	ENST00000327320.4|EED|ENSG00000074266.13|embryonic ectoderm development 	ENST00000351625.6|EED|ENSG00000074266.13|embryonic ectoderm development 	ENST00000534595.1|EED|ENSG00000074266.13|embryonic ectoderm development
hg19_v2_chr5_+_61602055_61602083	0.32097	ACAGUAC	ENST00000381103.2|KIF2A|ENSG00000068796.12|kinesin heavy chain member 2A
hg19_v2_chr1_-_197169672_197169672	0.318822	ACAGUAC	ENST00000367405.4|ZBTB41|ENSG00000177888.7|zinc finger and BTB domain containing 41
hg19_v2_chr7_-_105029329_105029376	0.314506	ACAGUAC	ENST00000393651.3|SRPK2|ENSG00000135250.12|SRSF protein kinase 2 	ENST00000460391.1|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr6_+_19837592_19837621	0.310401	ACAGUAC	ENST00000378700.3|ID4|ENSG00000172201.6|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
hg19_v2_chrX_-_119694538_119694555	0.309547	ACAGUAC	ENST00000371322.5|CUL4B|ENSG00000158290.12|cullin 4B
hg19_v2_chr11_-_95522907_95522989	0.308508	ACAGUAC	ENST00000358780.5|FAM76B|ENSG00000077458.8|family with sequence similarity 76, member B 	ENST00000542135.1|FAM76B|ENSG00000077458.8|family with sequence similarity 76, member B
hg19_v2_chr9_+_101867359_101867376	0.307484	ACAGUAC	ENST00000374994.4|TGFBR1|ENSG00000106799.8|transforming growth factor, beta receptor 1
hg19_v2_chr9_-_14693417_14693469	0.302355	ACAGUAC	ENST00000380916.4|ZDHHC21|ENSG00000175893.7|zinc finger, DHHC-type containing 21
hg19_v2_chr1_+_198126093_198126207	0.30089	ACAGUAC	ENST00000367385.4|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000442588.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000538004.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7
hg19_v2_chr1_+_178694300_178694346	0.300378	ACAGUAC	ENST00000367635.3|RALGPS2|ENSG00000116191.13|Ral GEF with PH domain and SH3 binding motif 2
hg19_v2_chr3_-_24536253_24536328	0.295711	ACAGUAC	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr9_-_3525968_3526016	0.290391	ACAGUAC	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr6_-_86352642_86352709	0.29031	ACAGUAC	ENST00000355238.6|SYNCRIP|ENSG00000135316.13|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v2_chrX_+_70752917_70752933	0.288873	ACAGUAC	ENST00000373719.3|OGT|ENSG00000147162.9|O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr10_+_98592009_98592061	0.28836	ACAGUAC	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr1_-_244013384_244013430	0.28629	ACAGUAC	ENST00000366539.1|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr2_+_238875597_238875724	0.285783	ACAGUAC	ENST00000272930.4|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000448502.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000416292.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000409633.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000414443.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000409953.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000409332.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative)
hg19_v2_chr3_+_152017181_152017229	0.284708	ACAGUAC	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr7_+_8008418_8008443	0.282887	ACAGUAC	ENST00000223145.5|GLCCI1|ENSG00000106415.8|glucocorticoid induced transcript 1
hg19_v2_chr6_+_4021554_4021656	0.281246	ACAGUAC	ENST00000337659.6|PRPF4B|ENSG00000112739.12|pre-mRNA processing factor 4B
hg19_v2_chr4_-_71705590_71705662	0.278305	ACAGUAC	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr2_+_169312350_169312372	0.277024	ACAGUAC	ENST00000305747.6|CERS6|ENSG00000172292.10|ceramide synthase 6
hg19_v2_chr8_-_74791051_74791145	0.271678	ACAGUAC	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr2_+_61108650_61108687	0.270103	ACAGUAC	ENST00000295025.8|REL|ENSG00000162924.9|v-rel avian reticuloendotheliosis viral oncogene homolog
hg19_v2_chr3_+_23986748_23986761	0.26891	ACAGUAC	ENST00000312521.4|NR1D2|ENSG00000174738.8|nuclear receptor subfamily 1, group D, member 2
hg19_v2_chr9_+_4985228_4985245	0.263826	ACAGUAC	ENST00000381652.3|JAK2|ENSG00000096968.8|Janus kinase 2
hg19_v2_chr6_-_146135880_146135952	0.262146	ACAGUAC	ENST00000237281.4|FBXO30|ENSG00000118496.4|F-box protein 30
hg19_v2_chr2_-_172290482_172290596	0.260294	ACAGUAC	ENST00000442541.1|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000392599.2|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000375258.4|METTL8|ENSG00000123600.14|methyltransferase like 8
hg19_v2_chr10_+_60094735_60094749	0.256894	ACAGUAC	ENST00000373910.4|UBE2D1|ENSG00000072401.10|ubiquitin-conjugating enzyme E2D 1
hg19_v2_chr15_-_55881135_55881192	0.256592	ACAGUAC	ENST00000302000.6|PYGO1|ENSG00000171016.7|pygopus family PHD finger 1
hg19_v2_chr2_-_206950781_206950947	0.255252	ACAGUAC	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr13_-_41240717_41240735	0.252545	ACAGUAC	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr15_+_44719394_44719579	0.251174	ACAGUAC	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr2_+_201676256_201676323	0.250341	ACAGUAC	ENST00000452206.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000410110.2|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000409600.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1
hg19_v2_chr12_+_27485823_27485868	0.249734	ACAGUAC	ENST00000395901.2|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2 	ENST00000546179.1|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2
hg19_v2_chr8_-_122653630_122653661	0.242473	ACAGUAC	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr4_+_144257915_144258009	0.241057	ACAGUAC	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr1_-_184723942_184724047	0.240786	ACAGUAC	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr3_-_88108192_88108203	0.23995	ACAGUAC	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr4_-_54930790_54930857	0.239187	ACAGUAC	ENST00000263921.3|CHIC2|ENSG00000109220.6|cysteine-rich hydrophobic domain 2
hg19_v2_chr5_+_115177178_115177178	0.23823	ACAGUAC	ENST00000316788.7|AP3S1|ENSG00000177879.10|adaptor-related protein complex 3, sigma 1 subunit
hg19_v2_chr20_-_35274548_35274622	0.236753	ACAGUAC	ENST00000262866.4|SLA2|ENSG00000101082.9|Src-like-adaptor 2
hg19_v2_chr16_+_66400533_66400545	0.236736	ACAGUAC	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr11_+_109964087_109964123	0.235965	ACAGUAC	ENST00000278590.3|ZC3H12C|ENSG00000149289.6|zinc finger CCCH-type containing 12C
hg19_v2_chr8_+_26149007_26149061	0.235221	ACAGUAC	ENST00000380737.3|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000524169.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chr5_+_77656339_77656362	0.232738	ACAGUAC	ENST00000538629.1|SCAMP1|ENSG00000085365.13|secretory carrier membrane protein 1
hg19_v2_chr1_+_244816237_244816357	0.228005	ACAGUAC	ENST00000302550.11|DESI2|ENSG00000121644.14|desumoylating isopeptidase 2
hg19_v2_chr8_-_12612962_12613049	0.223159	ACAGUAC	ENST00000398246.3|LONRF1|ENSG00000154359.8|LON peptidase N-terminal domain and ring finger 1
hg19_v2_chr2_-_65357225_65357267	0.221861	ACAGUAC	ENST00000398529.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409751.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000356214.7|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409892.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409784.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family
hg19_v2_chr13_+_20532807_20532841	0.220819	ACAGUAC	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr18_+_9136758_9136852	0.21657	ACAGUAC	ENST00000383440.2|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000262126.4|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000577992.1|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12
hg19_v2_chr12_-_30848914_30848948	0.216266	ACAGUAC	ENST00000256079.4|IPO8|ENSG00000133704.5|importin 8
hg19_v2_chr2_+_198365122_198365137	0.211494	ACAGUAC	ENST00000604458.1|HSPE1-MOB4|ENSG00000270757.1|HSPE1-MOB4 readthrough
hg19_v2_chr10_+_115674530_115674530	0.210752	ACAGUAC	ENST00000451472.1|AL162407.1|ENSG00000234631.1|CDNA FLJ20147 fis, clone COL07954; HCG1781466; Uncharacterized protein
hg19_v2_chr3_+_19988566_19988648	0.210435	ACAGUAC	ENST00000273047.4|RAB5A|ENSG00000144566.6|RAB5A, member RAS oncogene family
hg19_v2_chr3_+_57261743_57261824	0.207817	ACAGUAC	ENST00000288266.3|APPL1|ENSG00000157500.6|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
hg19_v2_chr5_-_171433819_171433911	0.206843	ACAGUAC	ENST00000296933.6|FBXW11|ENSG00000072803.13|F-box and WD repeat domain containing 11
hg19_v2_chr4_+_26862400_26862416	0.205017	ACAGUAC	ENST00000467011.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000412829.2|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr3_-_141944398_141944465	0.20331	ACAGUAC	ENST00000544571.1|GK5|ENSG00000175066.11|glycerol kinase 5 (putative) 	ENST00000392993.2|GK5|ENSG00000175066.11|glycerol kinase 5 (putative)
hg19_v2_chr18_-_52626622_52626739	0.202923	ACAGUAC	ENST00000591504.1|CCDC68|ENSG00000166510.9|coiled-coil domain containing 68
hg19_v2_chrX_+_103411189_103411301	0.202783	ACAGUAC	ENST00000493442.1|FAM199X|ENSG00000123575.8|family with sequence similarity 199, X-linked
hg19_v2_chr15_+_38544476_38544574	0.201533	ACAGUAC	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr5_-_90679145_90679176	0.200844	ACAGUAC	ENST00000265138.3|ARRDC3|ENSG00000113369.4|arrestin domain containing 3
hg19_v2_chr11_-_67980744_67980882	0.199713	ACAGUAC	ENST00000401547.2|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000453170.1|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000304363.4|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila)
hg19_v2_chr4_+_78078304_78078406	0.197034	ACAGUAC	ENST00000316355.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000354403.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000502280.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr3_+_155588300_155588369	0.196397	ACAGUAC	ENST00000496455.2|GMPS|ENSG00000163655.11|guanine monphosphate synthase
hg19_v2_chr8_+_40010989_40011008	0.19374	ACAGUAC	ENST00000315792.3|C8orf4|ENSG00000176907.3|chromosome 8 open reading frame 4
hg19_v2_chr13_+_26828275_26828312	0.192892	ACAGUAC	ENST00000381527.3|CDK8|ENSG00000132964.7|cyclin-dependent kinase 8
hg19_v2_chr13_+_33160553_33160564	0.191946	ACAGUAC	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr1_+_162467595_162467655	0.19059	ACAGUAC	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr6_+_64345698_64345750	0.187831	ACAGUAC	ENST00000506783.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000481385.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000515594.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000494284.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000262043.3|PHF3|ENSG00000118482.7|PHD finger protein 3
hg19_v2_chr17_-_38821373_38821440	0.186324	ACAGUAC	ENST00000394052.3|KRT222|ENSG00000213424.4|keratin 222
hg19_v2_chr16_-_46723066_46723121	0.185118	ACAGUAC	ENST00000299138.7|VPS35|ENSG00000069329.11|vacuolar protein sorting 35 homolog (S. cerevisiae)
hg19_v2_chr8_-_74884511_74884546	0.184684	ACAGUAC	ENST00000518127.1|TCEB1|ENSG00000154582.12|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
hg19_v2_chr5_+_127419449_127419540	0.183511	ACAGUAC	ENST00000262461.2|SLC12A2|ENSG00000064651.9|solute carrier family 12 (sodium/potassium/chloride transporter), member 2 	ENST00000343225.4|SLC12A2|ENSG00000064651.9|solute carrier family 12 (sodium/potassium/chloride transporter), member 2
hg19_v2_chr4_-_103748880_103749047	0.182865	ACAGUAC	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr20_-_14318248_14318264	0.178794	ACAGUAC	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr4_+_106816592_106816608	0.174578	ACAGUAC	ENST00000379987.2|NPNT|ENSG00000168743.8|nephronectin 	ENST00000453617.2|NPNT|ENSG00000168743.8|nephronectin 	ENST00000427316.2|NPNT|ENSG00000168743.8|nephronectin 	ENST00000514622.1|NPNT|ENSG00000168743.8|nephronectin 	ENST00000305572.8|NPNT|ENSG00000168743.8|nephronectin
hg19_v2_chr5_-_114880533_114880591	0.174168	ACAGUAC	ENST00000274457.3|FEM1C|ENSG00000145780.6|fem-1 homolog c (C. elegans)
hg19_v2_chr1_-_169455169_169455241	0.172706	ACAGUAC	ENST00000367804.4|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2 	ENST00000236137.5|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2
hg19_v2_chr16_-_65155833_65155976	0.170101	ACAGUAC	ENST00000566827.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000394156.3|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000562998.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast)
hg19_v2_chrX_-_131352152_131352204	0.167683	ACAGUAC	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr5_-_81046922_81047072	0.166951	ACAGUAC	ENST00000514493.1|SSBP2|ENSG00000145687.11|single-stranded DNA binding protein 2 	ENST00000320672.4|SSBP2|ENSG00000145687.11|single-stranded DNA binding protein 2
hg19_v2_chr1_-_26232951_26232959	0.166196	ACAGUAC	ENST00000426559.2|STMN1|ENSG00000117632.16|stathmin 1 	ENST00000455785.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr18_-_18691739_18691812	0.164791	ACAGUAC	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr2_-_180129484_180129574	0.163217	ACAGUAC	ENST00000428443.3|SESTD1|ENSG00000187231.9|SEC14 and spectrin domains 1
hg19_v2_chrX_-_100604184_100604184	0.16055	ACAGUAC	ENST00000372902.3|TIMM8A|ENSG00000126953.5|translocase of inner mitochondrial membrane 8 homolog A (yeast)
hg19_v2_chr10_+_31608054_31608156	0.15935	ACAGUAC	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr17_-_60142609_60142657	0.15868	ACAGUAC	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr6_-_8064567_8064652	0.157724	ACAGUAC	ENST00000543936.1|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted 	ENST00000397457.2|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted
hg19_v2_chr15_+_77223960_77223994	0.156651	ACAGUAC	ENST00000394885.3|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain
hg19_v2_chr5_+_96271141_96271168	0.152509	ACAGUAC	ENST00000231368.5|LNPEP|ENSG00000113441.11|leucyl/cystinyl aminopeptidase
hg19_v2_chr5_+_139505520_139505523	0.152405	ACAGUAC	ENST00000333305.3|IGIP|ENSG00000182700.3|IgA-inducing protein
hg19_v2_chr21_+_37692481_37692558	0.152366	ACAGUAC	ENST00000400485.1|MORC3|ENSG00000159256.8|MORC family CW-type zinc finger 3
hg19_v2_chr7_-_120498357_120498456	0.150699	ACAGUAC	ENST00000415871.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000222747.3|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000430985.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chr7_-_79082867_79082900	0.149975	ACAGUAC	ENST00000419488.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2 	ENST00000354212.4|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr20_+_8112824_8112925	0.14977	ACAGUAC	ENST00000378641.3|PLCB1|ENSG00000182621.12|phospholipase C, beta 1 (phosphoinositide-specific)
hg19_v2_chr3_-_178790057_178790072	0.14905	ACAGUAC	ENST00000311417.2|ZMAT3|ENSG00000172667.6|zinc finger, matrin-type 3
hg19_v2_chrX_-_109561294_109561467	0.148339	ACAGUAC	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr8_+_104311059_104311132	0.146478	ACAGUAC	ENST00000358755.4|FZD6|ENSG00000164930.7|frizzled family receptor 6 	ENST00000523739.1|FZD6|ENSG00000164930.7|frizzled family receptor 6 	ENST00000540287.1|FZD6|ENSG00000164930.7|frizzled family receptor 6
hg19_v2_chr1_-_47697387_47697457	0.143297	ACAGUAC	ENST00000371884.2|TAL1|ENSG00000162367.7|T-cell acute lymphocytic leukemia 1
hg19_v2_chr16_+_9185450_9185516	0.142314	ACAGUAC	ENST00000327827.7|C16orf72|ENSG00000182831.7|chromosome 16 open reading frame 72
hg19_v2_chr1_+_199996702_199996732	0.141593	ACAGUAC	ENST00000367362.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr3_-_125094093_125094198	0.140524	ACAGUAC	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr5_-_168006591_168006638	0.134825	ACAGUAC	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr3_+_67048721_67048760	0.133783	ACAGUAC	ENST00000295568.4|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000484414.1|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000460576.1|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000417314.2|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8
hg19_v2_chr2_+_16080659_16080686	0.133178	ACAGUAC	ENST00000281043.3|MYCN|ENSG00000134323.10|v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
hg19_v2_chr14_-_82000140_82000229	0.13312	ACAGUAC	ENST00000555824.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000557372.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000336735.4|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans)
hg19_v2_chrX_-_51239425_51239453	0.13267	ACAGUAC	ENST00000375992.3|NUDT11|ENSG00000196368.4|nudix (nucleoside diphosphate linked moiety X)-type motif 11
hg19_v2_chrX_-_128657457_128657477	0.130491	ACAGUAC	ENST00000371121.3|SMARCA1|ENSG00000102038.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 	ENST00000371123.1|SMARCA1|ENSG00000102038.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 	ENST00000371122.4|SMARCA1|ENSG00000102038.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
hg19_v2_chr11_+_9406169_9406210	0.12987	ACAGUAC	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr5_+_86564739_86564791	0.126052	ACAGUAC	ENST00000456692.2|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000512763.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000506290.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1
hg19_v2_chr7_+_116312411_116312502	0.125789	ACAGUAC	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr17_+_60536002_60536040	0.125486	ACAGUAC	ENST00000582809.1|TLK2|ENSG00000146872.13|tousled-like kinase 2
hg19_v2_chr6_+_121756809_121756838	0.124141	ACAGUAC	ENST00000282561.3|GJA1|ENSG00000152661.7|gap junction protein, alpha 1, 43kDa
hg19_v2_chr11_+_4116005_4116047	0.122266	ACAGUAC	ENST00000300738.5|RRM1|ENSG00000167325.10|ribonucleotide reductase M1
hg19_v2_chr1_-_85725316_85725367	0.119564	ACAGUAC	ENST00000344356.5|C1orf52|ENSG00000162642.9|chromosome 1 open reading frame 52 	ENST00000471115.1|C1orf52|ENSG00000162642.9|chromosome 1 open reading frame 52
hg19_v2_chrX_+_133507327_133507386	0.119436	ACAGUAC	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chrX_+_21857717_21857763	0.118511	ACAGUAC	ENST00000379484.5|MBTPS2|ENSG00000012174.7|membrane-bound transcription factor peptidase, site 2
hg19_v2_chr1_+_100435315_100435345	0.118354	ACAGUAC	ENST00000370155.3|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 	ENST00000465289.1|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
hg19_v2_chr17_+_2496971_2497040	0.118335	ACAGUAC	ENST00000397195.5|PAFAH1B1|ENSG00000007168.8|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg19_v2_chr12_+_93965451_93965494	0.116797	ACAGUAC	ENST00000548537.1|SOCS2|ENSG00000120833.9|suppressor of cytokine signaling 2
hg19_v2_chr15_-_83876758_83876770	0.115905	ACAGUAC	ENST00000299633.4|HDGFRP3|ENSG00000166503.4|Hepatoma-derived growth factor-related protein 3
hg19_v2_chr12_-_111021110_111021142	0.115152	ACAGUAC	ENST00000354300.3|PPTC7|ENSG00000196850.4|PTC7 protein phosphatase homolog (S. cerevisiae)
hg19_v2_chr7_-_28220354_28220441	0.112592	ACAGUAC	ENST00000283928.5|JAZF1|ENSG00000153814.7|JAZF zinc finger 1
hg19_v2_chr12_+_95611516_95611527	0.112591	ACAGUAC	ENST00000436874.1|VEZT|ENSG00000028203.13|vezatin, adherens junctions transmembrane protein
hg19_v2_chr5_+_138940742_138940769	0.11199	ACAGUAC	ENST00000398733.3|UBE2D2|ENSG00000131508.11|ubiquitin-conjugating enzyme E2D 2 	ENST00000253815.2|UBE2D2|ENSG00000131508.11|ubiquitin-conjugating enzyme E2D 2 	ENST00000505007.1|UBE2D2|ENSG00000131508.11|ubiquitin-conjugating enzyme E2D 2
hg19_v2_chr13_-_50367057_50367142	0.11084	ACAGUAC	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr5_-_87564620_87564687	0.110268	ACAGUAC	ENST00000506536.1|TMEM161B|ENSG00000164180.9|transmembrane protein 161B 	ENST00000512429.1|TMEM161B|ENSG00000164180.9|transmembrane protein 161B 	ENST00000514135.1|TMEM161B|ENSG00000164180.9|transmembrane protein 161B 	ENST00000296595.6|TMEM161B|ENSG00000164180.9|transmembrane protein 161B 	ENST00000509387.1|TMEM161B|ENSG00000164180.9|transmembrane protein 161B
hg19_v2_chr2_-_201936302_201936416	0.109865	ACAGUAC	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr17_-_58603568_58603610	0.109496	ACAGUAC	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr4_-_129208940_129208976	0.108994	ACAGUAC	ENST00000296425.5|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chr13_-_77601282_77601308	0.108949	ACAGUAC	ENST00000355619.5|FBXL3|ENSG00000005812.6|F-box and leucine-rich repeat protein 3
hg19_v2_chr1_-_35395178_35395265	0.108702	ACAGUAC	ENST00000373347.1|DLGAP3|ENSG00000116544.7|discs, large (Drosophila) homolog-associated protein 3
hg19_v2_chr14_+_75745477_75745680	0.108413	ACAGUAC	ENST00000303562.4|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000554617.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000554212.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000535987.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000555242.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog
hg19_v2_chr12_+_68042495_68042508	0.10762	ACAGUAC	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr3_-_98620500_98620547	0.104839	ACAGUAC	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr2_+_71558858_71558936	0.104601	ACAGUAC	ENST00000437658.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000355812.3|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000377802.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000264447.4|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000409544.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000455226.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454278.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000417778.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454122.1|ZNF638|ENSG00000075292.14|zinc finger protein 638
hg19_v2_chr14_-_31495569_31495636	0.104191	ACAGUAC	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chr6_+_30524663_30524799	0.104161	ACAGUAC	ENST00000376560.3|PRR3|ENSG00000204576.7|proline rich 3
hg19_v2_chr6_-_85474219_85474237	0.104133	ACAGUAC	ENST00000369663.5|TBX18|ENSG00000112837.12|T-box 18
hg19_v2_chr18_-_29522989_29523104	0.104074	ACAGUAC	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr17_+_54671047_54671075	0.104037	ACAGUAC	ENST00000332822.4|NOG|ENSG00000183691.4|noggin
hg19_v2_chr2_-_24149977_24150007	0.104004	ACAGUAC	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr8_-_95961578_95961639	0.103758	ACAGUAC	ENST00000448464.2|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1 	ENST00000342697.4|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1
hg19_v2_chr2_+_196521458_196521491	0.102324	ACAGUAC	ENST00000409086.3|SLC39A10|ENSG00000196950.9|solute carrier family 39 (zinc transporter), member 10
hg19_v2_chr4_+_1795012_1795039	0.0995078	ACAGUAC	ENST00000481110.2|FGFR3|ENSG00000068078.13|fibroblast growth factor receptor 3 	ENST00000340107.4|FGFR3|ENSG00000068078.13|fibroblast growth factor receptor 3 	ENST00000440486.2|FGFR3|ENSG00000068078.13|fibroblast growth factor receptor 3 	ENST00000412135.2|FGFR3|ENSG00000068078.13|fibroblast growth factor receptor 3
hg19_v2_chr8_-_105601134_105601252	0.0993984	ACAGUAC	ENST00000276654.5|LRP12|ENSG00000147650.7|low density lipoprotein receptor-related protein 12 	ENST00000424843.2|LRP12|ENSG00000147650.7|low density lipoprotein receptor-related protein 12
hg19_v2_chr4_-_36246060_36246167	0.0993366	ACAGUAC	ENST00000303965.4|ARAP2|ENSG00000047365.7|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
hg19_v2_chr20_-_57617831_57617964	0.0984238	ACAGUAC	ENST00000371033.5|SLMO2|ENSG00000101166.11|slowmo homolog 2 (Drosophila) 	ENST00000355937.4|SLMO2|ENSG00000101166.11|slowmo homolog 2 (Drosophila)
hg19_v2_chr11_-_123525289_123525341	0.0973447	ACAGUAC	ENST00000392770.2|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit 	ENST00000299333.3|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit 	ENST00000530277.1|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit
hg19_v2_chr5_+_112043186_112043225	0.0968852	ACAGUAC	ENST00000509732.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000457016.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000507379.1|APC|ENSG00000134982.12|adenomatous polyposis coli
hg19_v2_chr11_-_86666427_86666450	0.0959027	ACAGUAC	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr6_-_111804393_111804436	0.0958151	ACAGUAC	ENST00000368802.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000368805.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chr3_-_122233723_122233797	0.0946775	ACAGUAC	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr4_-_53525406_53525502	0.0932667	ACAGUAC	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr4_+_15004165_15004298	0.0923399	ACAGUAC	ENST00000538197.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000541112.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000442003.2|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2
hg19_v2_chr3_+_15247686_15247784	0.0911554	ACAGUAC	ENST00000253693.2|CAPN7|ENSG00000131375.5|calpain 7
hg19_v2_chr3_-_138553594_138553684	0.0900748	ACAGUAC	ENST00000477593.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta 	ENST00000483968.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
hg19_v2_chr7_-_14029515_14029642	0.0888659	ACAGUAC	ENST00000430479.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000405218.2|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000343495.5|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr8_-_56685859_56685945	0.0884358	ACAGUAC	ENST00000523423.1|TMEM68|ENSG00000167904.10|transmembrane protein 68 	ENST00000523073.1|TMEM68|ENSG00000167904.10|transmembrane protein 68 	ENST00000519784.1|TMEM68|ENSG00000167904.10|transmembrane protein 68 	ENST00000434581.2|TMEM68|ENSG00000167904.10|transmembrane protein 68 	ENST00000519780.1|TMEM68|ENSG00000167904.10|transmembrane protein 68 	ENST00000521229.1|TMEM68|ENSG00000167904.10|transmembrane protein 68 	ENST00000522576.1|TMEM68|ENSG00000167904.10|transmembrane protein 68 	ENST00000523180.1|TMEM68|ENSG00000167904.10|transmembrane protein 68 	ENST00000522090.1|TMEM68|ENSG00000167904.10|transmembrane protein 68
hg19_v2_chr22_-_28315115_28315260	0.0881538	ACAGUAC	ENST00000455418.3|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000436663.1|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000320996.10|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000335272.5|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta
hg19_v2_chr12_+_62860581_62860629	0.0872581	ACAGUAC	ENST00000393632.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393630.3|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000280379.6|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000546600.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552738.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393629.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552115.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae)
hg19_v2_chr2_+_160568978_160569064	0.0871768	ACAGUAC	ENST00000409175.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000539065.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000259050.4|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000421037.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
hg19_v2_chr20_+_37434329_37434371	0.0870147	ACAGUAC	ENST00000299824.1|PPP1R16B|ENSG00000101445.5|protein phosphatase 1, regulatory subunit 16B 	ENST00000373331.2|PPP1R16B|ENSG00000101445.5|protein phosphatase 1, regulatory subunit 16B
hg19_v2_chr4_-_125633876_125633897	0.0869651	ACAGUAC	ENST00000504087.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50 	ENST00000515641.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50
hg19_v2_chr2_-_179343268_179343338	0.0862012	ACAGUAC	ENST00000424785.2|FKBP7|ENSG00000079150.13|FK506 binding protein 7
hg19_v2_chr1_+_205473720_205473732	0.0856644	ACAGUAC	ENST00000429964.2|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18 	ENST00000506784.1|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18 	ENST00000360066.2|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18
hg19_v2_chrX_+_118708493_118708506	0.0851827	ACAGUAC	ENST00000371558.2|UBE2A|ENSG00000077721.11|ubiquitin-conjugating enzyme E2A
hg19_v2_chr16_-_62070305_62070310	0.0843449	ACAGUAC	ENST00000584337.1|CDH8|ENSG00000150394.9|cadherin 8, type 2
hg19_v2_chr12_-_31479045_31479074	0.0835522	ACAGUAC	ENST00000539409.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A 	ENST00000395766.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr1_+_180601139_180601180	0.0827217	ACAGUAC	ENST00000367590.4|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1 	ENST00000367589.3|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1
hg19_v2_chr13_+_47127293_47127321	0.082594	ACAGUAC	ENST00000311191.6|LRCH1|ENSG00000136141.10|leucine-rich repeats and calponin homology (CH) domain containing 1
hg19_v2_chr13_+_98605902_98605968	0.0823884	ACAGUAC	ENST00000460070.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481455.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000261574.5|IPO5|ENSG00000065150.14|importin 5 	ENST00000493281.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000463157.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000471898.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000489058.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481689.1|IPO5|ENSG00000065150.14|importin 5
hg19_v2_chr3_+_8775466_8775552	0.0823842	ACAGUAC	ENST00000343849.2|CAV3|ENSG00000182533.6|caveolin 3 	ENST00000397368.2|CAV3|ENSG00000182533.6|caveolin 3
hg19_v2_chr4_-_39640700_39640712	0.0823311	ACAGUAC	ENST00000295958.5|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr19_+_32836499_32836625	0.0807804	ACAGUAC	ENST00000311921.4|ZNF507|ENSG00000168813.12|zinc finger protein 507 	ENST00000544431.1|ZNF507|ENSG00000168813.12|zinc finger protein 507 	ENST00000355898.5|ZNF507|ENSG00000168813.12|zinc finger protein 507
hg19_v2_chr10_-_124713842_124713919	0.0803851	ACAGUAC	ENST00000481909.1|C10orf88|ENSG00000119965.8|chromosome 10 open reading frame 88
hg19_v2_chr2_-_100106419_100106522	0.0802079	ACAGUAC	ENST00000393445.3|REV1|ENSG00000135945.5|REV1, polymerase (DNA directed) 	ENST00000258428.3|REV1|ENSG00000135945.5|REV1, polymerase (DNA directed)
hg19_v2_chr7_-_44924939_44924993	0.0792603	ACAGUAC	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr11_+_12308447_12308447	0.0791208	ACAGUAC	ENST00000256186.2|MICALCL|ENSG00000133808.4|MICAL C-terminal like
hg19_v2_chr7_-_117513540_117513587	0.0786128	ACAGUAC	ENST00000160373.3|CTTNBP2|ENSG00000077063.6|cortactin binding protein 2
hg19_v2_chr7_-_32931387_32931509	0.0780848	ACAGUAC	ENST00000304056.4|KBTBD2|ENSG00000170852.6|kelch repeat and BTB (POZ) domain containing 2
hg19_v2_chr6_+_150920999_150921062	0.0770829	ACAGUAC	ENST00000367328.1|PLEKHG1|ENSG00000120278.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 1 	ENST00000367326.1|PLEKHG1|ENSG00000120278.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 1
hg19_v2_chr5_+_52776228_52776245	0.0761912	ACAGUAC	ENST00000256759.3|FST|ENSG00000134363.7|follistatin
hg19_v2_chrX_-_122866874_122866911	0.0761067	ACAGUAC	ENST00000245838.8|THOC2|ENSG00000125676.15|THO complex 2 	ENST00000355725.4|THOC2|ENSG00000125676.15|THO complex 2
hg19_v2_chr2_-_225450013_225450068	0.0760912	ACAGUAC	ENST00000264414.4|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr7_+_65338230_65338293	0.0759408	ACAGUAC	ENST00000360768.3|VKORC1L1|ENSG00000196715.5|vitamin K epoxide reductase complex, subunit 1-like 1
hg19_v2_chr2_+_120517174_120517207	0.0754009	ACAGUAC	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr17_+_30677136_30677205	0.0750819	ACAGUAC	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chrX_+_40944871_40944888	0.0743953	ACAGUAC	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr14_+_57857262_57857334	0.0743281	ACAGUAC	ENST00000555166.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000556492.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000554703.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg19_v2_chr8_+_126442563_126442624	0.0739877	ACAGUAC	ENST00000311922.3|TRIB1|ENSG00000173334.3|tribbles pseudokinase 1
hg19_v2_chr5_-_40798263_40798300	0.0739219	ACAGUAC	ENST00000296800.4|PRKAA1|ENSG00000132356.7|protein kinase, AMP-activated, alpha 1 catalytic subunit 	ENST00000397128.2|PRKAA1|ENSG00000132356.7|protein kinase, AMP-activated, alpha 1 catalytic subunit
hg19_v2_chr3_+_150321068_150321123	0.0721673	ACAGUAC	ENST00000471696.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000477889.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000485923.1|SELT|ENSG00000198843.8|Selenoprotein T
hg19_v2_chr17_+_16593539_16593639	0.07114	ACAGUAC	ENST00000340621.5|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000399273.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000443444.2|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000360524.8|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000456009.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A
hg19_v2_chr4_+_144106080_144106144	0.0708902	ACAGUAC	ENST00000307017.4|USP38|ENSG00000170185.5|ubiquitin specific peptidase 38
hg19_v2_chr2_+_45878790_45878913	0.0708775	ACAGUAC	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr10_+_97803151_97803348	0.0707637	ACAGUAC	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr1_+_200708671_200708744	0.0706931	ACAGUAC	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr5_+_80597419_80597448	0.0704256	ACAGUAC	ENST00000254037.2|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9 	ENST00000407610.3|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9 	ENST00000380199.5|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9
hg19_v2_chr6_-_110679475_110679567	0.0701073	ACAGUAC	ENST00000338882.4|METTL24|ENSG00000053328.8|methyltransferase like 24
hg19_v2_chr9_+_5629025_5629119	0.0691255	ACAGUAC	ENST00000251879.6|KIAA1432|ENSG00000107036.7|KIAA1432 	ENST00000414202.2|KIAA1432|ENSG00000107036.7|KIAA1432
hg19_v2_chr2_-_164592497_164592573	0.0690271	ACAGUAC	ENST00000333129.3|FIGN|ENSG00000182263.9|fidgetin 	ENST00000409634.1|FIGN|ENSG00000182263.9|fidgetin
hg19_v2_chr8_-_70747205_70747299	0.0684864	ACAGUAC	ENST00000260126.4|SLCO5A1|ENSG00000137571.6|solute carrier organic anion transporter family, member 5A1
hg19_v2_chr3_+_37284668_37284771	0.0684836	ACAGUAC	ENST00000361924.2|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000444882.1|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000356847.4|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000450863.2|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000429018.1|GOLGA4|ENSG00000144674.12|golgin A4
hg19_v2_chr8_-_125384927_125384952	0.06795	ACAGUAC	ENST00000297632.6|TMEM65|ENSG00000164983.6|transmembrane protein 65
hg19_v2_chr1_+_110091189_110091268	0.0677839	ACAGUAC	ENST00000369851.4|GNAI3|ENSG00000065135.7|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
hg19_v2_chr8_-_127570603_127570648	0.06745	ACAGUAC	ENST00000304916.3|FAM84B|ENSG00000168672.3|family with sequence similarity 84, member B
hg19_v2_chr7_+_73442102_73442139	0.0663915	ACAGUAC	ENST00000445912.1|ELN|ENSG00000049540.12|elastin 	ENST00000252034.7|ELN|ENSG00000049540.12|elastin
hg19_v2_chr14_+_73525144_73525224	0.0658724	ACAGUAC	ENST00000261973.7|RBM25|ENSG00000119707.9|RNA binding motif protein 25 	ENST00000540173.1|RBM25|ENSG00000119707.9|RNA binding motif protein 25
hg19_v2_chr20_+_32951041_32951067	0.0654447	ACAGUAC	ENST00000374864.4|ITCH|ENSG00000078747.8|itchy E3 ubiquitin protein ligase
hg19_v2_chr3_+_169684553_169684616	0.0651846	ACAGUAC	ENST00000337002.4|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae) 	ENST00000480708.1|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae)
hg19_v2_chr5_+_139175380_139175431	0.0648533	ACAGUAC	ENST00000274710.3|PSD2|ENSG00000146005.3|pleckstrin and Sec7 domain containing 2
hg19_v2_chr6_-_75915757_75915775	0.0647625	ACAGUAC	ENST00000322507.8|COL12A1|ENSG00000111799.16|collagen, type XII, alpha 1
hg19_v2_chr5_+_172483347_172483407	0.0644981	ACAGUAC	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr6_-_13711773_13711796	0.0640854	ACAGUAC	ENST00000011619.3|RANBP9|ENSG00000010017.9|RAN binding protein 9
hg19_v2_chr2_-_217560248_217560278	0.0640835	ACAGUAC	ENST00000233813.4|IGFBP5|ENSG00000115461.4|insulin-like growth factor binding protein 5
hg19_v2_chr2_+_170683942_170683972	0.0625199	ACAGUAC	ENST00000272793.5|UBR3|ENSG00000144357.12|ubiquitin protein ligase E3 component n-recognin 3 (putative)
hg19_v2_chr15_-_59225844_59225855	0.0623922	ACAGUAC	ENST00000380516.2|SLTM|ENSG00000137776.12|SAFB-like, transcription modulator
hg19_v2_chr15_+_68570062_68570147	0.0616131	ACAGUAC	ENST00000306917.4|FEM1B|ENSG00000169018.5|fem-1 homolog b (C. elegans)
hg19_v2_chr4_-_99579733_99579789	0.0611603	ACAGUAC	ENST00000305798.3|TSPAN5|ENSG00000168785.3|tetraspanin 5
hg19_v2_chr17_+_11144580_11144740	0.0609198	ACAGUAC	ENST00000441885.3|SHISA6|ENSG00000188803.10|shisa family member 6 	ENST00000432116.3|SHISA6|ENSG00000188803.10|shisa family member 6 	ENST00000409168.3|SHISA6|ENSG00000188803.10|shisa family member 6
hg19_v2_chr14_-_53619816_53620056	0.0597395	ACAGUAC	ENST00000323669.5|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000395606.1|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000357758.3|DDHD1|ENSG00000100523.10|DDHD domain containing 1
hg19_v2_chr17_-_5389477_5389537	0.0592872	ACAGUAC	ENST00000572834.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000570848.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000571971.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000158771.4|DERL2|ENSG00000072849.6|derlin 2
hg19_v2_chr8_-_42698433_42698486	0.059231	ACAGUAC	ENST00000345117.2|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1 	ENST00000254250.3|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1
hg19_v2_chr13_+_49550015_49550070	0.0576179	ACAGUAC	ENST00000492622.2|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr5_+_65222299_65222361	0.0570541	ACAGUAC	ENST00000284037.5|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein
hg19_v2_chr15_-_77363513_77363570	0.0566835	ACAGUAC	ENST00000267970.4|TSPAN3|ENSG00000140391.10|tetraspanin 3
hg19_v2_chr5_+_82767284_82767310	0.056559	ACAGUAC	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr2_-_182545603_182545603	0.0563854	ACAGUAC	ENST00000295108.3|NEUROD1|ENSG00000162992.3|neuronal differentiation 1
hg19_v2_chr9_+_2621798_2621834	0.0563199	ACAGUAC	ENST00000382100.3|VLDLR|ENSG00000147852.11|very low density lipoprotein receptor
hg19_v2_chr12_-_57119300_57119331	0.0561998	ACAGUAC	ENST00000546917.1|NACA|ENSG00000196531.6|nascent polypeptide-associated complex alpha subunit 	ENST00000454682.1|NACA|ENSG00000196531.6|nascent polypeptide-associated complex alpha subunit
hg19_v2_chr13_+_113622810_113622830	0.0560892	ACAGUAC	ENST00000397030.1|MCF2L|ENSG00000126217.16|MCF.2 cell line derived transforming sequence-like
hg19_v2_chr8_+_79578282_79578334	0.0558362	ACAGUAC	ENST00000263849.4|ZC2HC1A|ENSG00000104427.7|zinc finger, C2HC-type containing 1A
hg19_v2_chr5_-_38595498_38595514	0.0556576	ACAGUAC	ENST00000263409.4|LIFR|ENSG00000113594.5|leukemia inhibitory factor receptor alpha
hg19_v2_chr4_-_80994210_80994284	0.0553229	ACAGUAC	ENST00000403729.2|ANTXR2|ENSG00000163297.12|anthrax toxin receptor 2
hg19_v2_chr16_-_20911641_20911720	0.0551461	ACAGUAC	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr18_+_60190226_60190314	0.0550406	ACAGUAC	ENST00000269499.5|ZCCHC2|ENSG00000141664.5|zinc finger, CCHC domain containing 2
hg19_v2_chr12_+_14518598_14518663	0.0543598	ACAGUAC	ENST00000261168.4|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000538511.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000545723.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000543189.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536444.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr10_+_60272814_60272900	0.0531194	ACAGUAC	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr1_+_179923873_179923954	0.0530534	ACAGUAC	ENST00000367607.3|CEP350|ENSG00000135837.11|centrosomal protein 350kDa 	ENST00000491495.2|CEP350|ENSG00000135837.11|centrosomal protein 350kDa
hg19_v2_chr2_+_135676381_135676435	0.0527474	ACAGUAC	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr1_-_217804377_217804446	0.0514922	ACAGUAC	ENST00000366935.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2 	ENST00000366934.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2
hg19_v2_chr16_-_69419871_69419927	0.0512574	ACAGUAC	ENST00000603068.1|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2 	ENST00000254942.3|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2 	ENST00000567296.2|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2
hg19_v2_chr15_-_60690163_60690242	0.0508334	ACAGUAC	ENST00000558998.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560165.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000557986.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559780.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559467.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559956.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000332680.4|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000396024.3|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000421017.2|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560466.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558132.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559113.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000557906.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558558.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560468.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559370.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558169.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559725.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558985.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000451270.2|ANXA2|ENSG00000182718.12|annexin A2
hg19_v2_chr14_-_52535712_52535753	0.0505365	ACAGUAC	ENST00000216286.5|NID2|ENSG00000087303.12|nidogen 2 (osteonidogen) 	ENST00000541773.1|NID2|ENSG00000087303.12|nidogen 2 (osteonidogen)
hg19_v2_chr14_-_101036119_101036131	0.0505343	ACAGUAC	ENST00000355173.2|BEGAIN|ENSG00000183092.11|brain-enriched guanylate kinase-associated
hg19_v2_chr1_-_235491462_235491534	0.0492446	ACAGUAC	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr4_+_38665810_38665827	0.0485608	ACAGUAC	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr16_-_47177874_47177922	0.0480993	ACAGUAC	ENST00000562435.1|NETO2|ENSG00000171208.5|neuropilin (NRP) and tolloid (TLL)-like 2
hg19_v2_chr2_-_114036488_114036527	0.0479584	ACAGUAC	ENST00000263335.7|PAX8|ENSG00000125618.12|paired box 8 	ENST00000397647.3|PAX8|ENSG00000125618.12|paired box 8 	ENST00000348715.5|PAX8|ENSG00000125618.12|paired box 8 	ENST00000429538.3|PAX8|ENSG00000125618.12|paired box 8
hg19_v2_chr9_+_4490394_4490446	0.0476467	ACAGUAC	ENST00000262352.3|SLC1A1|ENSG00000106688.7|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v2_chr16_-_17564738_17564834	0.0473975	ACAGUAC	ENST00000261381.6|XYLT1|ENSG00000103489.7|xylosyltransferase I
hg19_v2_chr10_-_91403625_91403649	0.0467967	ACAGUAC	ENST00000322191.6|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000342512.3|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000371774.2|PANK1|ENSG00000152782.12|pantothenate kinase 1
hg19_v2_chr9_-_101471479_101471522	0.0462651	ACAGUAC	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr12_-_76425368_76425384	0.046021	ACAGUAC	ENST00000602540.1|PHLDA1|ENSG00000139289.9|pleckstrin homology-like domain, family A, member 1
hg19_v2_chr20_+_58508817_58508867	0.0457582	ACAGUAC	ENST00000358293.3|FAM217B|ENSG00000196227.6|family with sequence similarity 217, member B
hg19_v2_chr9_-_98279241_98279339	0.0451402	ACAGUAC	ENST00000437951.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000375274.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000430669.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000468211.2|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr6_-_134639180_134639220	0.0450393	ACAGUAC	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chr3_+_38495333_38495422	0.0445298	ACAGUAC	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr8_+_133787586_133787673	0.0438999	ACAGUAC	ENST00000395379.1|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000395386.2|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000337920.4|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1
hg19_v2_chr13_+_97874574_97874609	0.0438678	ACAGUAC	ENST00000343600.4|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2 	ENST00000345429.6|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2 	ENST00000376673.3|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2
hg19_v2_chr19_-_18632861_18632937	0.0436662	ACAGUAC	ENST00000262809.4|ELL|ENSG00000105656.8|elongation factor RNA polymerase II
hg19_v2_chr15_-_83316254_83316368	0.0431787	ACAGUAC	ENST00000567678.1|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1 	ENST00000450751.2|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1
hg19_v2_chr11_+_9685604_9685706	0.0422322	ACAGUAC	ENST00000447399.2|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit 	ENST00000318950.6|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit
hg19_v2_chr11_-_18765389_18765499	0.0419572	ACAGUAC	ENST00000477854.1|PTPN5|ENSG00000110786.13|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
hg19_v2_chr1_+_82266053_82266082	0.0417912	ACAGUAC	ENST00000370715.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370713.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000319517.6|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370717.2|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000394879.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000271029.4|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000335786.5|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chrX_-_19988382_19988416	0.0415427	ACAGUAC	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr1_+_112162381_112162431	0.0411146	ACAGUAC	ENST00000433097.1|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000369709.3|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000436150.2|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family
hg19_v2_chr10_+_96162242_96162283	0.0410449	ACAGUAC	ENST00000225235.4|TBC1D12|ENSG00000108239.8|TBC1 domain family, member 12
hg19_v2_chr6_-_99873145_99873207	0.0408145	ACAGUAC	ENST00000369239.5|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein 	ENST00000438806.1|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein
hg19_v2_chr12_+_69864129_69864222	0.04002	ACAGUAC	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr21_-_46238034_46238051	0.0392497	ACAGUAC	ENST00000332859.6|SUMO3|ENSG00000184900.11|small ubiquitin-like modifier 3
hg19_v2_chr19_-_49622348_49622407	0.0387067	ACAGUAC	ENST00000408991.2|C19orf73|ENSG00000221916.2|chromosome 19 open reading frame 73
hg19_v2_chr6_-_100912785_100912822	0.0384754	ACAGUAC	ENST00000369208.3|SIM1|ENSG00000112246.5|single-minded family bHLH transcription factor 1
hg19_v2_chr1_+_203764742_203764834	0.0382039	ACAGUAC	ENST00000432282.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000453771.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000367214.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000367212.3|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000332127.4|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A
hg19_v2_chr3_-_129407535_129407575	0.0379756	ACAGUAC	ENST00000432054.2|TMCC1|ENSG00000172765.12|transmembrane and coiled-coil domain family 1
hg19_v2_chr3_-_99833333_99833357	0.036429	ACAGUAC	ENST00000354552.3|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like 	ENST00000331335.5|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like 	ENST00000398326.2|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like
hg19_v2_chr9_+_78505581_78505621	0.0362897	ACAGUAC	ENST00000376767.3|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5 	ENST00000376752.4|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5
hg19_v2_chr3_+_39851094_39851151	0.0353987	ACAGUAC	ENST00000302541.6|MYRIP|ENSG00000170011.9|myosin VIIA and Rab interacting protein
hg19_v2_chr3_+_69812877_69812962	0.0345102	ACAGUAC	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr6_-_35464727_35464738	0.0344019	ACAGUAC	ENST00000402886.3|TEAD3|ENSG00000007866.14|TEA domain family member 3
hg19_v2_chr1_-_220445757_220445819	0.0343879	ACAGUAC	ENST00000358951.2|RAB3GAP2|ENSG00000118873.11|RAB3 GTPase activating protein subunit 2 (non-catalytic)
hg19_v2_chr20_+_35201857_35201891	0.0343804	ACAGUAC	ENST00000373874.2|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr2_-_37193606_37193633	0.0341857	ACAGUAC	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr4_-_153457197_153457268	0.0339779	ACAGUAC	ENST00000281708.4|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chr9_-_74525658_74525658	0.0339173	ACAGUAC	ENST00000333421.6|ABHD17B|ENSG00000107362.9|abhydrolase domain containing 17B
hg19_v2_chr11_+_33278811_33279133	0.0335618	ACAGUAC	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr3_-_52713729_52713784	0.0333467	ACAGUAC	ENST00000296302.7|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000356770.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000337303.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409057.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000410007.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409114.3|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409767.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000423351.1|PBRM1|ENSG00000163939.14|polybromo 1
hg19_v2_chr3_-_15901278_15901354	0.032873	ACAGUAC	ENST00000399451.2|ANKRD28|ENSG00000206560.6|ankyrin repeat domain 28
hg19_v2_chr18_-_53255766_53255860	0.0327212	ACAGUAC	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr2_-_160472952_160473080	0.0326473	ACAGUAC	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr3_+_147127142_147127171	0.0320322	ACAGUAC	ENST00000282928.4|ZIC1|ENSG00000152977.5|Zic family member 1
hg19_v2_chr6_-_24721054_24721074	0.0318367	ACAGUAC	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr9_-_123476719_123476810	0.0312251	ACAGUAC	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr4_+_55524085_55524110	0.030931	ACAGUAC	ENST00000412167.2|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 	ENST00000288135.5|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg19_v2_chr10_-_32345305_32345376	0.0300315	ACAGUAC	ENST00000302418.4|KIF5B|ENSG00000170759.10|kinesin family member 5B
hg19_v2_chr20_+_11871371_11871428	0.0294502	ACAGUAC	ENST00000254977.3|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr6_+_163835669_163835693	0.0291562	ACAGUAC	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr12_+_52203789_52203789	0.0288215	ACAGUAC	ENST00000599343.1|AC068987.1|ENSG00000260415.3|HCG1997999; cDNA FLJ33996 fis, clone DFNES2008881
hg19_v2_chr11_-_94964354_94964374	0.0280372	ACAGUAC	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr7_-_102985035_102985277	0.0277629	ACAGUAC	ENST00000426036.2|DNAJC2|ENSG00000105821.10|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENST00000249270.7|DNAJC2|ENSG00000105821.10|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENST00000454277.1|DNAJC2|ENSG00000105821.10|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENST00000412522.1|DNAJC2|ENSG00000105821.10|DnaJ (Hsp40) homolog, subfamily C, member 2
hg19_v2_chr12_+_19592602_19592648	0.0271549	ACAGUAC	ENST00000398864.3|AEBP2|ENSG00000139154.10|AE binding protein 2 	ENST00000266508.9|AEBP2|ENSG00000139154.10|AE binding protein 2
hg19_v2_chrX_+_146993449_146993498	0.0251457	ACAGUAC	ENST00000218200.8|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370471.3|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370477.1|FMR1|ENSG00000102081.9|fragile X mental retardation 1
hg19_v2_chr8_-_23712312_23712328	0.0241017	ACAGUAC	ENST00000290271.2|STC1|ENSG00000159167.7|stanniocalcin 1
hg19_v2_chr2_+_14772810_14772853	0.0235615	ACAGUAC	ENST00000295092.2|FAM84A|ENSG00000162981.12|family with sequence similarity 84, member A 	ENST00000331243.4|FAM84A|ENSG00000162981.12|family with sequence similarity 84, member A
hg19_v2_chr2_-_216300784_216300895	0.0231182	ACAGUAC	ENST00000421182.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000432072.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000323926.6|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000336916.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357867.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000359671.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000346544.3|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000345488.5|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357009.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000446046.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000356005.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000443816.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000426059.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000354785.4|FN1|ENSG00000115414.14|fibronectin 1
hg19_v2_chr6_-_132834184_132834337	0.0230729	ACAGUAC	ENST00000367941.2|STX7|ENSG00000079950.9|syntaxin 7 	ENST00000367937.4|STX7|ENSG00000079950.9|syntaxin 7
hg19_v2_chr2_+_128848881_128848908	0.0226089	ACAGUAC	ENST00000259253.6|UGGT1|ENSG00000136731.8|UDP-glucose glycoprotein glucosyltransferase 1
hg19_v2_chr10_+_115614370_115614436	0.0211699	ACAGUAC	ENST00000369301.3|NHLRC2|ENSG00000196865.4|NHL repeat containing 2
hg19_v2_chr14_-_99947168_99947232	0.0210421	ACAGUAC	ENST00000331768.5|SETD3|ENSG00000183576.8|SET domain containing 3
hg19_v2_chr10_+_114206956_114207040	0.0205622	ACAGUAC	ENST00000432306.1|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A 	ENST00000393077.2|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A
hg19_v2_chr12_-_88974236_88974256	0.0183992	ACAGUAC	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chr3_-_185826855_185826911	0.0176861	ACAGUAC	ENST00000306376.5|ETV5|ENSG00000244405.3|ets variant 5
hg19_v2_chr2_+_223289208_223289236	0.017589	ACAGUAC	ENST00000321276.7|SGPP2|ENSG00000163082.9|sphingosine-1-phosphate phosphatase 2
hg19_v2_chr6_+_28109703_28109716	0.0174219	ACAGUAC	ENST00000457389.2|ZKSCAN8|ENSG00000198315.6|zinc finger with KRAB and SCAN domains 8 	ENST00000330236.6|ZKSCAN8|ENSG00000198315.6|zinc finger with KRAB and SCAN domains 8
hg19_v2_chr10_+_93683519_93683594	0.0161383	ACAGUAC	ENST00000265990.6|BTAF1|ENSG00000095564.9|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
hg19_v2_chr17_-_47755436_47755596	0.0158684	ACAGUAC	ENST00000505581.1|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000514121.1|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000393328.2|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000509079.1|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000393331.3|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000347630.2|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000504102.1|SPOP|ENSG00000121067.13|speckle-type POZ protein
hg19_v2_chr5_+_85913721_85913790	0.0155572	ACAGUAC	ENST00000247655.3|COX7C|ENSG00000127184.6|cytochrome c oxidase subunit VIIc 	ENST00000509578.1|COX7C|ENSG00000127184.6|cytochrome c oxidase subunit VIIc 	ENST00000515763.1|COX7C|ENSG00000127184.6|cytochrome c oxidase subunit VIIc
hg19_v2_chr3_+_10857885_10857920	0.014616	ACAGUAC	ENST00000254488.2|SLC6A11|ENSG00000132164.5|solute carrier family 6 (neurotransmitter transporter), member 11 	ENST00000454147.1|SLC6A11|ENSG00000132164.5|solute carrier family 6 (neurotransmitter transporter), member 11
hg19_v2_chr2_+_208394616_208394655	0.0135748	ACAGUAC	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chrX_+_110339439_110339605	0.013005	ACAGUAC	ENST00000372010.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000519681.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000372007.5|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v2_chr6_+_89790490_89790506	0.012158	ACAGUAC	ENST00000336032.3|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr10_+_52751010_52751118	0.0121467	ACAGUAC	ENST00000373985.1|PRKG1|ENSG00000185532.10|protein kinase, cGMP-dependent, type I
hg19_v2_chr3_-_171178157_171178225	0.0118193	ACAGUAC	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr1_+_167190066_167190156	0.0116965	ACAGUAC	ENST00000367866.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000429375.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000452019.1|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000420254.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000541643.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1
hg19_v2_chr2_+_113033164_113033219	0.0116161	ACAGUAC	ENST00000409871.1|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6 	ENST00000343936.4|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6
hg19_v2_chr4_+_72204755_72204778	0.0114682	ACAGUAC	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr2_-_208030647_208030689	0.0113402	ACAGUAC	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr10_-_62149433_62149488	0.0113112	ACAGUAC	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr6_-_82462425_82462491	0.0108879	ACAGUAC	ENST00000369754.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000320172.6|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000369756.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A
hg19_v2_chr8_-_66754172_66754201	0.0106763	ACAGUAC	ENST00000401827.3|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr1_+_155829286_155829340	0.0101787	ACAGUAC	ENST00000368324.4|SYT11|ENSG00000132718.7|synaptotagmin XI
hg19_v2_chr14_+_67707826_67707994	0.00991918	ACAGUAC	ENST00000261681.4|MPP5|ENSG00000072415.4|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
hg19_v2_chr1_+_229406847_229406935	0.00927727	ACAGUAC	ENST00000366690.4|RAB4A|ENSG00000168118.7|RAB4A, member RAS oncogene family
hg19_v2_chr8_+_67579807_67579887	0.00923052	ACAGUAC	ENST00000519289.1|C8orf44-SGK3|ENSG00000270024.1|C8orf44-SGK3 readthrough 	ENST00000519561.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44 	ENST00000521889.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44
hg19_v2_chr3_+_130569429_130569479	0.00904916	ACAGUAC	ENST00000505330.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000504381.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000507488.2|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000393221.4|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr1_-_24306798_24306828	0.00848623	ACAGUAC	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr3_-_56835967_56835995	0.00810407	ACAGUAC	ENST00000495373.1|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3 	ENST00000296315.3|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3
hg19_v2_chr9_+_128509624_128509658	0.00736821	ACAGUAC	ENST00000342287.5|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3 	ENST00000373487.4|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3
hg19_v2_chr13_-_77460525_77460548	0.00728756	ACAGUAC	ENST00000377474.2|KCTD12|ENSG00000178695.4|potassium channel tetramerization domain containing 12 	ENST00000317765.2|KCTD12|ENSG00000178695.4|potassium channel tetramerization domain containing 12
hg19_v2_chr6_+_71377473_71377520	0.00702249	ACAGUAC	ENST00000370452.3|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000316999.5|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000370455.3|SMAP1|ENSG00000112305.10|small ArfGAP 1
hg19_v2_chr11_+_129939779_129939801	0.00626052	ACAGUAC	ENST00000533195.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000533713.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000528499.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000539648.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000263574.5|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2
hg19_v2_chr4_+_170541660_170541677	0.00577358	ACAGUAC	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr1_-_94374946_94374994	0.00559756	ACAGUAC	ENST00000370238.3|GCLM|ENSG00000023909.5|glutamate-cysteine ligase, modifier subunit
hg19_v2_chr1_-_155532484_155532605	0.00492772	ACAGUAC	ENST00000368346.3|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila) 	ENST00000548830.1|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila)
hg19_v2_chr7_+_18535346_18535399	0.00479629	ACAGUAC	ENST00000405010.3|HDAC9|ENSG00000048052.17|histone deacetylase 9 	ENST00000406451.4|HDAC9|ENSG00000048052.17|histone deacetylase 9 	ENST00000428307.2|HDAC9|ENSG00000048052.17|histone deacetylase 9
hg19_v2_chr2_-_158485387_158485517	0.00398725	ACAGUAC	ENST00000243349.8|ACVR1C|ENSG00000123612.11|activin A receptor, type IC
hg19_v2_chr15_-_68498376_68498417	0.0036602	ACAGUAC	ENST00000540479.1|CALML4|ENSG00000129007.10|calmodulin-like 4 	ENST00000395465.3|CALML4|ENSG00000129007.10|calmodulin-like 4
hg19_v2_chr1_+_113933581_113933611	0.00213429	ACAGUAC	ENST00000307546.9|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369615.1|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369611.4|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3
hg19_v2_chr1_-_154531095_154531119	0.00188635	ACAGUAC	ENST00000292211.4|UBE2Q1|ENSG00000160714.5|ubiquitin-conjugating enzyme E2Q family member 1
hg19_v2_chr4_-_114682936_114683083	0.00163195	ACAGUAC	ENST00000454265.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000429180.1|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000418639.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000394526.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000296402.5|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta
hg19_v2_chr17_-_65241281_65241326	0.000262963	ACAGUAC	ENST00000358691.5|HELZ|ENSG00000198265.7|helicase with zinc finger 	ENST00000580168.1|HELZ|ENSG00000198265.7|helicase with zinc finger
