hg19_v2_chr11_+_34642656_34642682	0.456998	AAUGCCC	ENST00000257831.3|EHF|ENSG00000135373.8|ets homologous factor 	ENST00000450654.2|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr2_+_46926048_46926095	0.329117	AAUGCCC	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr2_-_153574480_153574552	0.266439	AAUGCCC	ENST00000410080.1|PRPF40A|ENSG00000196504.11|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg19_v2_chr13_-_21476900_21476949	0.245381	AAUGCCC	ENST00000400602.2|XPO4|ENSG00000132953.12|exportin 4 	ENST00000255305.6|XPO4|ENSG00000132953.12|exportin 4
hg19_v2_chr17_+_68165657_68165688	0.223033	AAUGCCC	ENST00000243457.3|KCNJ2|ENSG00000123700.4|potassium inwardly-rectifying channel, subfamily J, member 2
hg19_v2_chr2_-_180129484_180129574	0.167645	AAUGCCC	ENST00000428443.3|SESTD1|ENSG00000187231.9|SEC14 and spectrin domains 1
hg19_v2_chr3_+_23986748_23986761	0.159771	AAUGCCC	ENST00000312521.4|NR1D2|ENSG00000174738.8|nuclear receptor subfamily 1, group D, member 2
hg19_v2_chr5_-_90679145_90679176	0.156056	AAUGCCC	ENST00000265138.3|ARRDC3|ENSG00000113369.4|arrestin domain containing 3
hg19_v2_chr5_-_39074479_39074515	0.155128	AAUGCCC	ENST00000514735.1|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000296782.5|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000357387.3|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2
hg19_v2_chr3_+_113775576_113775592	0.148458	AAUGCCC	ENST00000485050.1|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1 	ENST00000281273.4|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1
hg19_v2_chr1_-_91487013_91487070	0.124398	AAUGCCC	ENST00000347275.5|ZNF644|ENSG00000122482.16|zinc finger protein 644 	ENST00000370440.1|ZNF644|ENSG00000122482.16|zinc finger protein 644
hg19_v2_chr1_-_22109682_22109719	0.118016	AAUGCCC	ENST00000400301.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48 	ENST00000532737.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr19_+_33166313_33166313	0.109895	AAUGCCC	ENST00000334176.3|RGS9BP|ENSG00000186326.3|regulator of G protein signaling 9 binding protein
hg19_v2_chr10_-_120101804_120101843	0.10575	AAUGCCC	ENST00000369183.4|FAM204A|ENSG00000165669.9|family with sequence similarity 204, member A 	ENST00000369172.4|FAM204A|ENSG00000165669.9|family with sequence similarity 204, member A
hg19_v2_chr7_-_83824169_83824217	0.102142	AAUGCCC	ENST00000265362.4|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr5_-_142065612_142065638	0.0989598	AAUGCCC	ENST00000360966.5|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic) 	ENST00000411960.1|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic)
hg19_v2_chr11_-_27528301_27528336	0.0973709	AAUGCCC	ENST00000524596.1|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans) 	ENST00000278193.2|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans)
hg19_v2_chr5_-_43313574_43313614	0.0960091	AAUGCCC	ENST00000325110.6|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 	ENST00000433297.2|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v2_chr15_+_52121822_52121833	0.095665	AAUGCCC	ENST00000558455.1|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous) 	ENST00000308580.7|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous)
hg19_v2_chr6_-_134639180_134639220	0.0953765	AAUGCCC	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chr12_-_66524482_66524548	0.0937666	AAUGCCC	ENST00000446587.2|LLPH|ENSG00000139233.2|LLP homolog, long-term synaptic facilitation (Aplysia) 	ENST00000266604.2|LLPH|ENSG00000139233.2|LLP homolog, long-term synaptic facilitation (Aplysia)
hg19_v2_chr5_-_59189545_59189625	0.0934126	AAUGCCC	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr1_+_97187318_97187380	0.0917434	AAUGCCC	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr1_-_78225482_78225544	0.0857485	AAUGCCC	ENST00000524778.1|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33 	ENST00000370794.3|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33 	ENST00000370793.1|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33 	ENST00000370792.3|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33
hg19_v2_chr9_+_114659046_114659102	0.0839367	AAUGCCC	ENST00000374279.3|UGCG|ENSG00000148154.5|UDP-glucose ceramide glucosyltransferase
hg19_v2_chr10_-_98346801_98346812	0.0821718	AAUGCCC	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr11_-_31839488_31839515	0.0809545	AAUGCCC	ENST00000419022.1|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379132.3|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379129.2|PAX6|ENSG00000007372.16|paired box 6
hg19_v2_chr12_-_89919965_89919978	0.0803277	AAUGCCC	ENST00000548729.1|POC1B-GALNT4|ENSG00000259075.2|POC1B-GALNT4 readthrough
hg19_v2_chr2_-_190649082_190649102	0.080209	AAUGCCC	ENST00000392350.3|ORMDL1|ENSG00000128699.9|ORM1-like 1 (S. cerevisiae) 	ENST00000392349.4|ORMDL1|ENSG00000128699.9|ORM1-like 1 (S. cerevisiae)
hg19_v2_chr1_-_244013384_244013430	0.0784283	AAUGCCC	ENST00000366539.1|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr11_-_102962929_102962944	0.0777976	AAUGCCC	ENST00000260247.5|DCUN1D5|ENSG00000137692.7|DCN1, defective in cullin neddylation 1, domain containing 5
hg19_v2_chr12_-_75905374_75905420	0.0738139	AAUGCCC	ENST00000438169.2|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast) 	ENST00000229214.4|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast)
hg19_v2_chr12_-_89918522_89918588	0.0726541	AAUGCCC	ENST00000529983.2|GALNT4|ENSG00000257594.2|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4)
hg19_v2_chr1_+_2160134_2160134	0.07169	AAUGCCC	ENST00000378536.4|SKI|ENSG00000157933.9|v-ski avian sarcoma viral oncogene homolog
hg19_v2_chr18_+_56338618_56338656	0.0713734	AAUGCCC	ENST00000348428.3|MALT1|ENSG00000172175.8|mucosa associated lymphoid tissue lymphoma translocation gene 1
hg19_v2_chr2_+_61108650_61108687	0.0709695	AAUGCCC	ENST00000295025.8|REL|ENSG00000162924.9|v-rel avian reticuloendotheliosis viral oncogene homolog
hg19_v2_chr11_+_2466218_2466255	0.0673788	AAUGCCC	ENST00000155840.5|KCNQ1|ENSG00000053918.11|potassium voltage-gated channel, KQT-like subfamily, member 1
hg19_v2_chr2_-_183903133_183903210	0.0662359	AAUGCCC	ENST00000361354.4|NCKAP1|ENSG00000061676.10|NCK-associated protein 1
hg19_v2_chrX_-_19988382_19988416	0.0643127	AAUGCCC	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr5_-_168006591_168006638	0.0632473	AAUGCCC	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr1_-_28415204_28415227	0.0624854	AAUGCCC	ENST00000373871.3|EYA3|ENSG00000158161.11|eyes absent homolog 3 (Drosophila)
hg19_v2_chr11_-_77532050_77532066	0.0613413	AAUGCCC	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr12_+_66217911_66218018	0.0602702	AAUGCCC	ENST00000403681.2|HMGA2|ENSG00000149948.9|high mobility group AT-hook 2
hg19_v2_chr13_+_93879085_93879136	0.0594352	AAUGCCC	ENST00000377047.4|GPC6|ENSG00000183098.6|glypican 6
hg19_v2_chr7_-_32931387_32931509	0.0572828	AAUGCCC	ENST00000304056.4|KBTBD2|ENSG00000170852.6|kelch repeat and BTB (POZ) domain containing 2
hg19_v2_chr2_+_179345173_179345221	0.0569221	AAUGCCC	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr1_-_155881156_155881210	0.0556389	AAUGCCC	ENST00000539040.1|RIT1|ENSG00000143622.6|Ras-like without CAAX 1 	ENST00000368323.3|RIT1|ENSG00000143622.6|Ras-like without CAAX 1
hg19_v2_chr3_-_113465065_113465147	0.0554832	AAUGCCC	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr9_+_131445928_131445934	0.0554557	AAUGCCC	ENST00000372692.4|SET|ENSG00000119335.12|SET nuclear oncogene
hg19_v2_chr2_-_39348137_39348212	0.0553794	AAUGCCC	ENST00000426016.1|SOS1|ENSG00000115904.8|son of sevenless homolog 1 (Drosophila)
hg19_v2_chr12_+_27396901_27397108	0.0548829	AAUGCCC	ENST00000541191.1|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like 	ENST00000389032.3|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like
hg19_v2_chr5_+_122181184_122181213	0.0546993	AAUGCCC	ENST00000513881.1|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr4_+_41992489_41992561	0.0541663	AAUGCCC	ENST00000264451.7|SLC30A9|ENSG00000014824.9|solute carrier family 30 (zinc transporter), member 9
hg19_v2_chr5_+_74632993_74633028	0.0534245	AAUGCCC	ENST00000287936.4|HMGCR|ENSG00000113161.11|3-hydroxy-3-methylglutaryl-CoA reductase
hg19_v2_chr10_+_22610124_22610188	0.0528907	AAUGCCC	ENST00000376663.3|BMI1|ENSG00000168283.9|BMI1 polycomb ring finger oncogene
hg19_v2_chr18_+_43753974_43754019	0.0528196	AAUGCCC	ENST00000282059.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25 	ENST00000321319.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25
hg19_v2_chr10_+_180987_181009	0.0521672	AAUGCCC	ENST00000381591.1|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11
hg19_v2_chr13_-_53024725_53024809	0.0517121	AAUGCCC	ENST00000378060.4|VPS36|ENSG00000136100.8|vacuolar protein sorting 36 homolog (S. cerevisiae)
hg19_v2_chr4_+_38665810_38665827	0.0511804	AAUGCCC	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chrX_-_109561294_109561467	0.0504599	AAUGCCC	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr8_+_59323823_59323947	0.0504053	AAUGCCC	ENST00000399598.2|UBXN2B|ENSG00000215114.3|UBX domain protein 2B
hg19_v2_chr20_+_56884752_56884799	0.0473667	AAUGCCC	ENST00000244040.3|RAB22A|ENSG00000124209.3|RAB22A, member RAS oncogene family
hg19_v2_chr12_-_15942309_15942330	0.0455554	AAUGCCC	ENST00000544064.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8 	ENST00000543523.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8 	ENST00000536793.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8
hg19_v2_chr4_-_103748880_103749047	0.0454499	AAUGCCC	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr3_+_150804676_150804697	0.0453397	AAUGCCC	ENST00000474524.1|MED12L|ENSG00000144893.8|mediator complex subunit 12-like 	ENST00000273432.4|MED12L|ENSG00000144893.8|mediator complex subunit 12-like
hg19_v2_chr8_+_124780672_124780764	0.042479	AAUGCCC	ENST00000521166.1|FAM91A1|ENSG00000176853.11|family with sequence similarity 91, member A1 	ENST00000334705.7|FAM91A1|ENSG00000176853.11|family with sequence similarity 91, member A1
hg19_v2_chr2_+_173600671_173600709	0.0419862	AAUGCCC	ENST00000409036.1|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr8_-_82598511_82598570	0.040949	AAUGCCC	ENST00000449740.2|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000311489.4|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000521360.1|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000519964.1|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000518202.1|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1
hg19_v2_chr15_+_68346501_68346550	0.0407542	AAUGCCC	ENST00000249636.6|PIAS1|ENSG00000033800.9|protein inhibitor of activated STAT, 1
hg19_v2_chr12_-_31479045_31479074	0.0388616	AAUGCCC	ENST00000539409.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A 	ENST00000395766.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr1_-_38325256_38325292	0.0378435	AAUGCCC	ENST00000373036.4|MTF1|ENSG00000188786.9|metal-regulatory transcription factor 1
hg19_v2_chr12_+_69864129_69864222	0.0377053	AAUGCCC	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr15_-_64995399_64995480	0.0375612	AAUGCCC	ENST00000559753.1|OAZ2|ENSG00000180304.10|ornithine decarboxylase antizyme 2 	ENST00000560258.2|OAZ2|ENSG00000180304.10|ornithine decarboxylase antizyme 2 	ENST00000559912.2|OAZ2|ENSG00000180304.10|ornithine decarboxylase antizyme 2 	ENST00000326005.6|OAZ2|ENSG00000180304.10|ornithine decarboxylase antizyme 2
hg19_v2_chr1_+_78470530_78470551	0.037554	AAUGCCC	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr16_+_53088885_53088961	0.0366036	AAUGCCC	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr3_+_101292939_101293063	0.0360111	AAUGCCC	ENST00000265260.3|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000469941.1|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000296024.5|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein
hg19_v2_chr1_-_205719295_205719404	0.035076	AAUGCCC	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr1_-_154600421_154600480	0.0330633	AAUGCCC	ENST00000368471.3|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific 	ENST00000292205.5|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific
hg19_v2_chr8_-_57906362_57906452	0.0328174	AAUGCCC	ENST00000262644.4|IMPAD1|ENSG00000104331.4|inositol monophosphatase domain containing 1
hg19_v2_chr5_-_32444828_32444872	0.0325513	AAUGCCC	ENST00000265069.8|ZFR|ENSG00000056097.11|zinc finger RNA binding protein
hg19_v2_chr8_-_38239732_38239796	0.0313298	AAUGCCC	ENST00000534155.1|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000433384.2|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000317025.8|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000316985.3|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1
hg19_v2_chr9_-_6007787_6007957	0.0312363	AAUGCCC	ENST00000399933.3|KIAA2026|ENSG00000183354.7|KIAA2026 	ENST00000381461.2|KIAA2026|ENSG00000183354.7|KIAA2026 	ENST00000513355.2|KIAA2026|ENSG00000183354.7|KIAA2026
hg19_v2_chr5_+_172483347_172483407	0.031093	AAUGCCC	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr10_-_32636106_32636150	0.0305774	AAUGCCC	ENST00000263062.8|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila) 	ENST00000319778.6|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr2_-_64881018_64881064	0.0281384	AAUGCCC	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chr5_-_89825328_89825422	0.0277602	AAUGCCC	ENST00000500869.2|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000315948.6|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000509384.1|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3
hg19_v2_chr3_-_71774516_71774587	0.0275803	AAUGCCC	ENST00000425534.3|EIF4E3|ENSG00000163412.8|eukaryotic translation initiation factor 4E family member 3
hg19_v2_chr12_+_56137064_56137183	0.0271833	AAUGCCC	ENST00000257868.5|GDF11|ENSG00000135414.5|growth differentiation factor 11 	ENST00000546799.1|GDF11|ENSG00000135414.5|growth differentiation factor 11
hg19_v2_chr7_+_104654623_104654669	0.0268337	AAUGCCC	ENST00000311117.3|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334877.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000257745.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334914.7|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000478990.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000495267.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000476671.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E
hg19_v2_chr17_+_35766965_35767030	0.0267964	AAUGCCC	ENST00000394395.2|TADA2A|ENSG00000108264.12|transcriptional adaptor 2A 	ENST00000589153.1|TADA2A|ENSG00000108264.12|transcriptional adaptor 2A 	ENST00000586023.1|TADA2A|ENSG00000108264.12|transcriptional adaptor 2A
hg19_v2_chr3_-_55523966_55523979	0.0265711	AAUGCCC	ENST00000474267.1|WNT5A|ENSG00000114251.9|wingless-type MMTV integration site family, member 5A
hg19_v2_chr18_+_34409069_34409203	0.0262716	AAUGCCC	ENST00000543923.1|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000280020.5|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000435985.2|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000592521.1|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000587139.1|KIAA1328|ENSG00000150477.10|KIAA1328
hg19_v2_chr4_-_11431389_11431389	0.025439	AAUGCCC	ENST00000002596.5|HS3ST1|ENSG00000002587.5|heparan sulfate (glucosamine) 3-O-sulfotransferase 1
hg19_v2_chr12_+_72666407_72666463	0.0250567	AAUGCCC	ENST00000261180.4|TRHDE|ENSG00000072657.4|thyrotropin-releasing hormone degrading enzyme
hg19_v2_chr9_+_128024067_128024190	0.0245666	AAUGCCC	ENST00000461379.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394084.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394105.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000470056.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394104.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000265956.4|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394083.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000495955.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000467750.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000297933.6|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1
hg19_v2_chrX_-_3631635_3631698	0.0244414	AAUGCCC	ENST00000262848.5|PRKX|ENSG00000183943.5|protein kinase, X-linked
hg19_v2_chr10_+_89622870_89622870	0.0244328	AAUGCCC	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr7_-_150652924_150652994	0.0235378	AAUGCCC	ENST00000330883.4|KCNH2|ENSG00000055118.10|potassium voltage-gated channel, subfamily H (eag-related), member 2
hg19_v2_chr16_+_50582222_50582241	0.0233995	AAUGCCC	ENST00000268459.3|NKD1|ENSG00000140807.4|naked cuticle homolog 1 (Drosophila)
hg19_v2_chr15_+_41523335_41523350	0.0222919	AAUGCCC	ENST00000334660.5|CHP1|ENSG00000187446.7|calcineurin-like EF-hand protein 1
hg19_v2_chr1_+_52521928_52521948	0.0220282	AAUGCCC	ENST00000489308.2|BTF3L4|ENSG00000134717.13|basic transcription factor 3-like 4
hg19_v2_chrX_+_69664706_69664819	0.0216426	AAUGCCC	ENST00000194900.4|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila) 	ENST00000374360.3|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila)
hg19_v2_chr10_-_98273668_98273688	0.021035	AAUGCCC	ENST00000357947.3|TLL2|ENSG00000095587.8|tolloid-like 2
hg19_v2_chr5_-_100238956_100238994	0.0210034	AAUGCCC	ENST00000231461.5|ST8SIA4|ENSG00000113532.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v2_chr17_-_27278304_27278408	0.019316	AAUGCCC	ENST00000577226.1|PHF12|ENSG00000109118.9|PHD finger protein 12
hg19_v2_chr2_-_208634287_208634439	0.019119	AAUGCCC	ENST00000295417.3|FZD5|ENSG00000163251.3|frizzled family receptor 5
hg19_v2_chr8_+_67579807_67579887	0.0185905	AAUGCCC	ENST00000519289.1|C8orf44-SGK3|ENSG00000270024.1|C8orf44-SGK3 readthrough 	ENST00000519561.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44 	ENST00000521889.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44
hg19_v2_chr5_-_65017921_65017968	0.0176415	AAUGCCC	ENST00000381007.4|SGTB|ENSG00000197860.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
hg19_v2_chr5_+_56205081_56205092	0.0170584	AAUGCCC	ENST00000285947.2|SETD9|ENSG00000155542.7|SET domain containing 9 	ENST00000541720.1|SETD9|ENSG00000155542.7|SET domain containing 9
hg19_v2_chrX_+_77359671_77359721	0.0161379	AAUGCCC	ENST00000373316.4|PGK1|ENSG00000102144.9|phosphoglycerate kinase 1
hg19_v2_chrX_-_83442915_83442985	0.0161244	AAUGCCC	ENST00000262752.2|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6 	ENST00000543399.1|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6
hg19_v2_chr10_-_62149433_62149488	0.015684	AAUGCCC	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr8_+_54764346_54764460	0.0152962	AAUGCCC	ENST00000297313.3|RGS20|ENSG00000147509.9|regulator of G-protein signaling 20 	ENST00000344277.6|RGS20|ENSG00000147509.9|regulator of G-protein signaling 20
hg19_v2_chr10_+_22605304_22605372	0.0151139	AAUGCCC	ENST00000475460.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000602390.1|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000456711.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000444869.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000489125.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough
hg19_v2_chr9_-_127905736_127905815	0.0150758	AAUGCCC	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr10_-_120514720_120514758	0.0150667	AAUGCCC	ENST00000369151.3|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1 	ENST00000340214.4|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1
hg19_v2_chr3_-_125094093_125094198	0.0149846	AAUGCCC	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr4_+_145567173_145567296	0.014936	AAUGCCC	ENST00000296575.3|HHIP|ENSG00000164161.5|hedgehog interacting protein
hg19_v2_chr12_+_68042495_68042508	0.0147496	AAUGCCC	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr6_-_111804393_111804436	0.0143865	AAUGCCC	ENST00000368802.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000368805.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chr22_+_32340481_32340510	0.0140861	AAUGCCC	ENST00000397492.1|YWHAH|ENSG00000128245.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta
hg19_v2_chr17_-_37557846_37557920	0.0139981	AAUGCCC	ENST00000394294.3|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000583610.1|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000264658.6|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20
hg19_v2_chr1_-_85462623_85462760	0.0139018	AAUGCCC	ENST00000370608.3|MCOLN2|ENSG00000153898.8|mucolipin 2
hg19_v2_chr7_-_151217001_151217019	0.0138827	AAUGCCC	ENST00000262187.5|RHEB|ENSG00000106615.5|Ras homolog enriched in brain
hg19_v2_chr14_-_55878538_55878576	0.0137347	AAUGCCC	ENST00000247178.5|ATG14|ENSG00000126775.8|autophagy related 14
hg19_v2_chr7_-_27205136_27205164	0.0126795	AAUGCCC	ENST00000396345.1|HOXA9|ENSG00000078399.11|homeobox A9 	ENST00000343483.6|HOXA9|ENSG00000078399.11|homeobox A9
hg19_v2_chr3_+_43328004_43328095	0.0119233	AAUGCCC	ENST00000454177.1|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000429705.2|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000296088.7|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000437827.1|SNRK|ENSG00000163788.9|SNF related kinase
hg19_v2_chr1_-_156051789_156051838	0.0119006	AAUGCCC	ENST00000532414.2|MEX3A|ENSG00000254726.2|mex-3 RNA binding family member A
hg19_v2_chr3_+_171758344_171758358	0.0110755	AAUGCCC	ENST00000336824.4|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B 	ENST00000423424.1|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B
hg19_v2_chr3_-_15901278_15901354	0.0106236	AAUGCCC	ENST00000399451.2|ANKRD28|ENSG00000206560.6|ankyrin repeat domain 28
hg19_v2_chr11_-_18656028_18656040	0.0105584	AAUGCCC	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr17_-_16118835_16118867	0.010315	AAUGCCC	ENST00000582357.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000436828.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000411510.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000268712.3|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1
hg19_v2_chr16_+_67063036_67063088	0.0101943	AAUGCCC	ENST00000290858.6|CBFB|ENSG00000067955.9|core-binding factor, beta subunit 	ENST00000564034.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr5_+_148724993_148725102	0.00958786	AAUGCCC	ENST00000513661.1|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli) 	ENST00000329271.3|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli) 	ENST00000416916.2|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli)
hg19_v2_chr10_+_52751010_52751118	0.00958088	AAUGCCC	ENST00000373985.1|PRKG1|ENSG00000185532.10|protein kinase, cGMP-dependent, type I
hg19_v2_chr13_+_114238997_114239077	0.00936861	AAUGCCC	ENST00000538138.1|TFDP1|ENSG00000198176.8|transcription factor Dp-1 	ENST00000375370.5|TFDP1|ENSG00000198176.8|transcription factor Dp-1
hg19_v2_chr3_-_33481835_33481905	0.00935397	AAUGCCC	ENST00000283629.3|UBP1|ENSG00000153560.7|upstream binding protein 1 (LBP-1a)
hg19_v2_chr19_+_42349092_42349153	0.00886506	AAUGCCC	ENST00000269945.3|DMRTC2|ENSG00000142025.11|DMRT-like family C2 	ENST00000596258.1|DMRTC2|ENSG00000142025.11|DMRT-like family C2
hg19_v2_chrX_-_153979315_153979373	0.00780195	AAUGCCC	ENST00000369575.3|GAB3|ENSG00000160219.7|GRB2-associated binding protein 3 	ENST00000369568.4|GAB3|ENSG00000160219.7|GRB2-associated binding protein 3 	ENST00000424127.2|GAB3|ENSG00000160219.7|GRB2-associated binding protein 3
hg19_v2_chr4_+_91048706_91048741	0.00750846	AAUGCCC	ENST00000509176.1|CCSER1|ENSG00000184305.10|coiled-coil serine-rich protein 1
hg19_v2_chr7_+_139044621_139044725	0.0073012	AAUGCCC	ENST00000354926.4|C7orf55-LUC7L2|ENSG00000146963.13|C7orf55-LUC7L2 readthrough
hg19_v2_chr7_-_111846435_111846471	0.00725863	AAUGCCC	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr4_-_176923483_176923514	0.00681133	AAUGCCC	ENST00000280187.7|GPM6A|ENSG00000150625.12|glycoprotein M6A 	ENST00000512509.1|GPM6A|ENSG00000150625.12|glycoprotein M6A
hg19_v2_chr1_-_153588334_153588414	0.00633415	AAUGCCC	ENST00000476873.1|S100A14|ENSG00000189334.4|S100 calcium binding protein A14
hg19_v2_chr12_-_67072714_67072925	0.00610102	AAUGCCC	ENST00000545666.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000398016.3|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000359742.4|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000286445.7|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000538211.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1
hg19_v2_chr17_+_28804380_28804460	0.00590961	AAUGCCC	ENST00000225724.5|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000451249.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000467337.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000581721.1|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000414833.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1
hg19_v2_chr1_+_197881592_197881635	0.00581788	AAUGCCC	ENST00000367391.1|LHX9|ENSG00000143355.11|LIM homeobox 9 	ENST00000367390.3|LHX9|ENSG00000143355.11|LIM homeobox 9
hg19_v2_chr1_+_29063271_29063283	0.00565759	AAUGCCC	ENST00000373812.3|YTHDF2|ENSG00000198492.10|YTH domain family, member 2
hg19_v2_chr11_+_48002076_48002132	0.00345559	AAUGCCC	ENST00000418331.2|PTPRJ|ENSG00000149177.8|protein tyrosine phosphatase, receptor type, J 	ENST00000440289.2|PTPRJ|ENSG00000149177.8|protein tyrosine phosphatase, receptor type, J
hg19_v2_chr7_+_94285637_94285689	0.00338919	AAUGCCC	ENST00000482108.1|PEG10|ENSG00000242265.1|paternally expressed 10 	ENST00000488574.1|PEG10|ENSG00000242265.1|paternally expressed 10
hg19_v2_chr17_-_48072574_48072597	0.00304239	AAUGCCC	ENST00000434704.2|DLX3|ENSG00000064195.7|distal-less homeobox 3
hg19_v2_chr17_-_56084578_56084707	0.00280555	AAUGCCC	ENST00000582730.2|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000584773.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000585096.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000258962.4|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1
hg19_v2_chr3_-_79068594_79068627	0.00279607	AAUGCCC	ENST00000436010.2|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr7_+_6414128_6414185	0.0026925	AAUGCCC	ENST00000348035.4|RAC1|ENSG00000136238.13|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 	ENST00000356142.4|RAC1|ENSG00000136238.13|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
hg19_v2_chr6_+_16129308_16129402	0.00201075	AAUGCCC	ENST00000356840.3|MYLIP|ENSG00000007944.10|myosin regulatory light chain interacting protein 	ENST00000349606.4|MYLIP|ENSG00000007944.10|myosin regulatory light chain interacting protein
hg19_v2_chr18_-_60987220_60987386	0.00193926	AAUGCCC	ENST00000398117.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr1_+_161284047_161284180	0.00188505	AAUGCCC	ENST00000367975.2|SDHC|ENSG00000143252.10|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa 	ENST00000342751.4|SDHC|ENSG00000143252.10|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa 	ENST00000432287.2|SDHC|ENSG00000143252.10|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa 	ENST00000392169.2|SDHC|ENSG00000143252.10|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa 	ENST00000513009.1|SDHC|ENSG00000143252.10|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa
hg19_v2_chr1_-_35658736_35658754	0.00187067	AAUGCCC	ENST00000357214.5|SFPQ|ENSG00000116560.6|splicing factor proline/glutamine-rich
hg19_v2_chr7_+_138145076_138145116	0.00181026	AAUGCCC	ENST00000343526.4|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr1_+_202976493_202976530	0.001101	AAUGCCC	ENST00000367242.3|TMEM183A|ENSG00000163444.7|transmembrane protein 183A
hg19_v2_chr22_+_21271714_21271770	0.000535698	AAUGCCC	ENST00000354336.3|CRKL|ENSG00000099942.8|v-crk avian sarcoma virus CT10 oncogene homolog-like
hg19_v2_chr12_-_42538657_42538720	0.000267951	AAUGCCC	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chrX_+_73641286_73641400	0.00014934	AAUGCCC	ENST00000587091.1|SLC16A2|ENSG00000147100.5|solute carrier family 16, member 2 (thyroid hormone transporter)
