hg19_v2_chr2_-_201936302_201936416	0.339175	AAAGUGC	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr6_-_90121938_90122025	0.293549	AAAGUGC	ENST00000369415.4|RRAGD|ENSG00000025039.10|Ras-related GTP binding D
hg19_v2_chr1_+_101361626_101361698	0.274671	AAAGUGC	ENST00000370112.4|SLC30A7|ENSG00000162695.7|solute carrier family 30 (zinc transporter), member 7
hg19_v2_chr16_+_69599861_69599887	0.262716	AAAGUGC	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr4_+_78078304_78078406	0.240629	AAAGUGC	ENST00000316355.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000354403.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000502280.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr4_-_53525406_53525502	0.231927	AAAGUGC	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr9_+_5510492_5510552	0.220502	AAAGUGC	ENST00000397745.2|PDCD1LG2|ENSG00000197646.6|programmed cell death 1 ligand 2
hg19_v2_chr7_-_44924939_44924993	0.219892	AAAGUGC	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr2_-_206950781_206950947	0.20216	AAAGUGC	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr13_-_23949671_23949702	0.196331	AAAGUGC	ENST00000402364.1|SACS|ENSG00000151835.9|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v2_chr14_+_36295504_36295580	0.193269	AAAGUGC	ENST00000216807.7|BRMS1L|ENSG00000100916.9|breast cancer metastasis-suppressor 1-like
hg19_v2_chr20_+_56884752_56884799	0.192262	AAAGUGC	ENST00000244040.3|RAB22A|ENSG00000124209.3|RAB22A, member RAS oncogene family
hg19_v2_chr5_-_82373260_82373315	0.191517	AAAGUGC	ENST00000502346.1|TMEM167A|ENSG00000174695.5|transmembrane protein 167A
hg19_v2_chr1_-_197169672_197169672	0.187481	AAAGUGC	ENST00000367405.4|ZBTB41|ENSG00000177888.7|zinc finger and BTB domain containing 41
hg19_v2_chr1_+_213123915_213123955	0.186947	AAAGUGC	ENST00000366968.4|VASH2|ENSG00000143494.11|vasohibin 2 	ENST00000490792.1|VASH2|ENSG00000143494.11|vasohibin 2
hg19_v2_chr7_+_106809406_106809460	0.174025	AAAGUGC	ENST00000468410.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000478930.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000464009.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000222574.4|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr11_-_82782861_82782949	0.171411	AAAGUGC	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr2_-_25194963_25194976	0.166908	AAAGUGC	ENST00000264711.2|DNAJC27|ENSG00000115137.7|DnaJ (Hsp40) homolog, subfamily C, member 27
hg19_v2_chr15_-_62352659_62352672	0.164871	AAAGUGC	ENST00000249837.3|VPS13C|ENSG00000129003.11|vacuolar protein sorting 13 homolog C (S. cerevisiae)
hg19_v2_chr22_-_22090064_22090127	0.164233	AAAGUGC	ENST00000339468.3|YPEL1|ENSG00000100027.10|yippee-like 1 (Drosophila)
hg19_v2_chr14_-_96830207_96830207	0.164122	AAAGUGC	ENST00000359933.4|ATG2B|ENSG00000066739.7|autophagy related 2B
hg19_v2_chrX_+_119384607_119384720	0.163344	AAAGUGC	ENST00000326624.2|ZBTB33|ENSG00000177485.6|zinc finger and BTB domain containing 33 	ENST00000557385.1|ZBTB33|ENSG00000177485.6|zinc finger and BTB domain containing 33
hg19_v2_chr21_+_35445827_35445886	0.16155	AAAGUGC	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chr6_-_152958521_152958549	0.155401	AAAGUGC	ENST00000367255.5|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000265368.4|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000448038.1|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000341594.5|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1
hg19_v2_chr6_-_116381918_116381977	0.154878	AAAGUGC	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr8_+_42752053_42752154	0.153675	AAAGUGC	ENST00000307602.4|HOOK3|ENSG00000168172.4|hook microtubule-tethering protein 3
hg19_v2_chr9_-_130742792_130742821	0.15182	AAAGUGC	ENST00000373095.1|FAM102A|ENSG00000167106.7|family with sequence similarity 102, member A
hg19_v2_chr1_-_25573977_25574010	0.149877	AAAGUGC	ENST00000243189.7|C1orf63|ENSG00000117616.13|chromosome 1 open reading frame 63
hg19_v2_chr5_+_10564432_10564580	0.145933	AAAGUGC	ENST00000296657.5|ANKRD33B|ENSG00000164236.7|ankyrin repeat domain 33B
hg19_v2_chr5_+_67511524_67511628	0.145181	AAAGUGC	ENST00000521381.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 	ENST00000521657.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr14_+_70078303_70078321	0.143628	AAAGUGC	ENST00000342745.4|KIAA0247|ENSG00000100647.7|KIAA0247
hg19_v2_chr14_+_45366472_45366514	0.141337	AAAGUGC	ENST00000325192.3|C14orf28|ENSG00000179476.3|chromosome 14 open reading frame 28
hg19_v2_chr5_+_140254884_140255058	0.140707	AAAGUGC	ENST00000398631.2|PCDHA12|ENSG00000251664.2|protocadherin alpha 12
hg19_v2_chr12_-_26278030_26278060	0.140399	AAAGUGC	ENST00000242728.4|BHLHE41|ENSG00000123095.5|basic helix-loop-helix family, member e41
hg19_v2_chr16_+_53088885_53088961	0.139341	AAAGUGC	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr6_+_24126350_24126497	0.135993	AAAGUGC	ENST00000378491.4|NRSN1|ENSG00000152954.7|neurensin 1 	ENST00000378478.1|NRSN1|ENSG00000152954.7|neurensin 1 	ENST00000378477.2|NRSN1|ENSG00000152954.7|neurensin 1
hg19_v2_chr18_+_9136758_9136852	0.135987	AAAGUGC	ENST00000383440.2|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000262126.4|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000577992.1|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12
hg19_v2_chr7_+_30174426_30174441	0.135635	AAAGUGC	ENST00000324453.8|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr5_+_172068232_172068320	0.135063	AAAGUGC	ENST00000520919.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000522853.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000369800.5|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B
hg19_v2_chr2_+_85981008_85981025	0.134917	AAAGUGC	ENST00000306279.3|ATOH8|ENSG00000168874.8|atonal homolog 8 (Drosophila)
hg19_v2_chr1_-_179198702_179198741	0.133919	AAAGUGC	ENST00000502732.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chr2_-_68694390_68694434	0.13257	AAAGUGC	ENST00000377957.3|FBXO48|ENSG00000204923.3|F-box protein 48
hg19_v2_chr10_-_123687497_123687562	0.132083	AAAGUGC	ENST00000369040.3|ATE1|ENSG00000107669.13|arginyltransferase 1 	ENST00000224652.6|ATE1|ENSG00000107669.13|arginyltransferase 1 	ENST00000369043.3|ATE1|ENSG00000107669.13|arginyltransferase 1
hg19_v2_chr7_-_28220354_28220441	0.13203	AAAGUGC	ENST00000283928.5|JAZF1|ENSG00000153814.7|JAZF zinc finger 1
hg19_v2_chr16_+_19125252_19125267	0.128764	AAAGUGC	ENST00000566735.1|ITPRIPL2|ENSG00000205730.5|inositol 1,4,5-trisphosphate receptor interacting protein-like 2 	ENST00000381440.3|ITPRIPL2|ENSG00000205730.5|inositol 1,4,5-trisphosphate receptor interacting protein-like 2
hg19_v2_chr3_+_43732362_43732408	0.128005	AAAGUGC	ENST00000458276.2|ABHD5|ENSG00000011198.3|abhydrolase domain containing 5
hg19_v2_chr18_-_67624160_67624238	0.126779	AAAGUGC	ENST00000581982.1|CD226|ENSG00000150637.4|CD226 molecule 	ENST00000280200.4|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr7_-_127032741_127032777	0.126016	AAAGUGC	ENST00000393313.1|ZNF800|ENSG00000048405.5|zinc finger protein 800 	ENST00000265827.3|ZNF800|ENSG00000048405.5|zinc finger protein 800 	ENST00000434602.1|ZNF800|ENSG00000048405.5|zinc finger protein 800
hg19_v2_chr3_-_142166904_142166916	0.125662	AAAGUGC	ENST00000264951.4|XRN1|ENSG00000114127.6|5'-3' exoribonuclease 1
hg19_v2_chr10_-_105615164_105615323	0.124112	AAAGUGC	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr17_+_38333263_38333368	0.123983	AAAGUGC	ENST00000456989.2|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1 	ENST00000543876.1|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1 	ENST00000544503.1|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1 	ENST00000264644.6|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1 	ENST00000538884.1|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1
hg19_v2_chr10_+_98592009_98592061	0.121175	AAAGUGC	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr2_-_190445499_190445613	0.120415	AAAGUGC	ENST00000261024.2|SLC40A1|ENSG00000138449.6|solute carrier family 40 (iron-regulated transporter), member 1
hg19_v2_chr20_+_49348081_49348096	0.119017	AAAGUGC	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr2_+_179345173_179345221	0.115904	AAAGUGC	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr1_-_211752073_211752084	0.115586	AAAGUGC	ENST00000367001.4|SLC30A1|ENSG00000170385.9|solute carrier family 30 (zinc transporter), member 1
hg19_v2_chr11_-_74109422_74109518	0.115126	AAAGUGC	ENST00000298198.4|PGM2L1|ENSG00000165434.6|phosphoglucomutase 2-like 1
hg19_v2_chr7_-_14029515_14029642	0.111447	AAAGUGC	ENST00000430479.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000405218.2|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000343495.5|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr1_-_205601064_205601090	0.111318	AAAGUGC	ENST00000357992.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1) 	ENST00000289703.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1)
hg19_v2_chr6_+_139456226_139456300	0.10999	AAAGUGC	ENST00000367658.2|HECA|ENSG00000112406.4|headcase homolog (Drosophila)
hg19_v2_chr11_+_56949221_56949221	0.109609	AAAGUGC	ENST00000497933.1|LRRC55|ENSG00000183908.5|leucine rich repeat containing 55
hg19_v2_chr11_-_46722117_46722183	0.109477	AAAGUGC	ENST00000311956.4|ARHGAP1|ENSG00000175220.7|Rho GTPase activating protein 1
hg19_v2_chr3_-_151176497_151176497	0.109356	AAAGUGC	ENST00000282466.3|IGSF10|ENSG00000152580.8|immunoglobulin superfamily, member 10
hg19_v2_chr8_+_123793633_123793703	0.108813	AAAGUGC	ENST00000314393.4|ZHX2|ENSG00000178764.6|zinc fingers and homeoboxes 2
hg19_v2_chr11_+_109964087_109964123	0.108634	AAAGUGC	ENST00000278590.3|ZC3H12C|ENSG00000149289.6|zinc finger CCCH-type containing 12C
hg19_v2_chr14_+_52118576_52118673	0.108293	AAAGUGC	ENST00000395718.2|FRMD6|ENSG00000139926.11|FERM domain containing 6 	ENST00000344768.5|FRMD6|ENSG00000139926.11|FERM domain containing 6
hg19_v2_chr15_+_44719394_44719579	0.108017	AAAGUGC	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr8_-_95961578_95961639	0.107948	AAAGUGC	ENST00000448464.2|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1 	ENST00000342697.4|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1
hg19_v2_chr11_-_8680383_8680394	0.107544	AAAGUGC	ENST00000299550.6|TRIM66|ENSG00000166436.11|tripartite motif containing 66
hg19_v2_chr5_-_132299313_132299334	0.106528	AAAGUGC	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr4_+_154387480_154387536	0.106091	AAAGUGC	ENST00000409663.3|KIAA0922|ENSG00000121210.11|KIAA0922 	ENST00000440693.1|KIAA0922|ENSG00000121210.11|KIAA0922 	ENST00000409959.3|KIAA0922|ENSG00000121210.11|KIAA0922
hg19_v2_chr7_-_106301405_106301484	0.104789	AAAGUGC	ENST00000523505.1|CCDC71L|ENSG00000253276.1|coiled-coil domain containing 71-like
hg19_v2_chr4_-_15656923_15657035	0.103533	AAAGUGC	ENST00000382358.4|FBXL5|ENSG00000118564.10|F-box and leucine-rich repeat protein 5 	ENST00000412094.2|FBXL5|ENSG00000118564.10|F-box and leucine-rich repeat protein 5 	ENST00000341285.3|FBXL5|ENSG00000118564.10|F-box and leucine-rich repeat protein 5
hg19_v2_chr7_-_2354099_2354115	0.103525	AAAGUGC	ENST00000222990.3|SNX8|ENSG00000106266.4|sorting nexin 8
hg19_v2_chrX_+_72783026_72783049	0.101672	AAAGUGC	ENST00000373504.6|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1 	ENST00000373502.5|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1
hg19_v2_chr5_+_98104978_98105010	0.10094	AAAGUGC	ENST00000308234.7|RGMB|ENSG00000174136.7|repulsive guidance molecule family member b
hg19_v2_chr11_+_34073195_34073266	0.100449	AAAGUGC	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr16_+_9185450_9185516	0.10027	AAAGUGC	ENST00000327827.7|C16orf72|ENSG00000182831.7|chromosome 16 open reading frame 72
hg19_v2_chr7_-_112430647_112430776	0.100047	AAAGUGC	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr2_+_139259324_139259389	0.0998972	AAAGUGC	ENST00000280098.4|SPOPL|ENSG00000144228.4|speckle-type POZ protein-like
hg19_v2_chr15_+_89631381_89631391	0.0986674	AAAGUGC	ENST00000352732.5|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chrX_-_73834449_73834481	0.0986286	AAAGUGC	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chr4_-_125633876_125633897	0.0984448	AAAGUGC	ENST00000504087.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50 	ENST00000515641.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50
hg19_v2_chr10_-_91295304_91295329	0.0981267	AAAGUGC	ENST00000341233.4|SLC16A12|ENSG00000152779.12|solute carrier family 16, member 12 	ENST00000371790.4|SLC16A12|ENSG00000152779.12|solute carrier family 16, member 12
hg19_v2_chr12_-_42538657_42538720	0.0964383	AAAGUGC	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr1_-_55680762_55680786	0.0962799	AAAGUGC	ENST00000407756.1|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24 	ENST00000294383.6|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24
hg19_v2_chr16_-_23160591_23160787	0.0957987	AAAGUGC	ENST00000219689.7|USP31|ENSG00000103404.10|ubiquitin specific peptidase 31
hg19_v2_chr2_-_151344172_151344243	0.0950942	AAAGUGC	ENST00000375734.2|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000263895.4|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000454202.1|RND3|ENSG00000115963.9|Rho family GTPase 3
hg19_v2_chr8_-_53626974_53627032	0.0950912	AAAGUGC	ENST00000435644.2|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1 	ENST00000518710.1|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1 	ENST00000025008.5|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1 	ENST00000517963.1|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1
hg19_v2_chr12_+_132379160_132379201	0.0942173	AAAGUGC	ENST00000321867.4|ULK1|ENSG00000177169.5|unc-51 like autophagy activating kinase 1
hg19_v2_chr2_-_39348137_39348212	0.0940301	AAAGUGC	ENST00000426016.1|SOS1|ENSG00000115904.8|son of sevenless homolog 1 (Drosophila)
hg19_v2_chr6_-_108395907_108395971	0.0936162	AAAGUGC	ENST00000193322.3|OSTM1|ENSG00000081087.10|osteopetrosis associated transmembrane protein 1
hg19_v2_chr11_+_32851487_32851496	0.093462	AAAGUGC	ENST00000257836.3|PRRG4|ENSG00000135378.3|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
hg19_v2_chr11_+_118307179_118307228	0.0931374	AAAGUGC	ENST00000534358.1|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000531904.2|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000389506.5|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000354520.4|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A
hg19_v2_chr2_+_157291953_157292003	0.0927436	AAAGUGC	ENST00000310454.6|GPD2|ENSG00000115159.11|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg19_v2_chr2_-_161350305_161350391	0.0917313	AAAGUGC	ENST00000348849.3|RBMS1|ENSG00000153250.13|RNA binding motif, single stranded interacting protein 1
hg19_v2_chr7_+_138916231_138916231	0.0917068	AAAGUGC	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr10_+_70320413_70320413	0.0916177	AAAGUGC	ENST00000373644.4|TET1|ENSG00000138336.8|tet methylcytosine dioxygenase 1
hg19_v2_chr22_-_30662828_30662847	0.0893544	AAAGUGC	ENST00000403463.1|OSM|ENSG00000099985.3|oncostatin M 	ENST00000215781.2|OSM|ENSG00000099985.3|oncostatin M
hg19_v2_chr9_+_4679555_4679617	0.0892844	AAAGUGC	ENST00000381858.1|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1 	ENST00000381854.3|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1
hg19_v2_chr4_+_166248775_166248901	0.0879485	AAAGUGC	ENST00000261507.6|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000507013.1|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000393766.2|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000504317.1|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1
hg19_v2_chr8_+_107670064_107670132	0.087286	AAAGUGC	ENST00000312046.6|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chr15_+_79165151_79165218	0.0872762	AAAGUGC	ENST00000331268.5|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1
hg19_v2_chr10_-_61469837_61469837	0.0870841	AAAGUGC	ENST00000395348.3|SLC16A9|ENSG00000165449.7|solute carrier family 16, member 9
hg19_v2_chr12_-_51611477_51611612	0.0867188	AAAGUGC	ENST00000389243.4|POU6F1|ENSG00000184271.11|POU class 6 homeobox 1
hg19_v2_chr15_-_72410109_72410161	0.0850029	AAAGUGC	ENST00000564571.1|MYO9A|ENSG00000066933.11|myosin IXA
hg19_v2_chrX_-_20284958_20285039	0.0849144	AAAGUGC	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr8_+_26240414_26240631	0.0842326	AAAGUGC	ENST00000380629.2|BNIP3L|ENSG00000104765.10|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg19_v2_chr6_-_79787902_79787958	0.0841017	AAAGUGC	ENST00000275034.4|PHIP|ENSG00000146247.13|pleckstrin homology domain interacting protein
hg19_v2_chr17_+_57408994_57409088	0.0829835	AAAGUGC	ENST00000312655.4|YPEL2|ENSG00000175155.4|yippee-like 2 (Drosophila)
hg19_v2_chr1_+_244998602_244998646	0.0828906	AAAGUGC	ENST00000411948.2|COX20|ENSG00000203667.5|COX20 cytochrome C oxidase assembly factor
hg19_v2_chr6_-_105585022_105585112	0.0818387	AAAGUGC	ENST00000314641.5|BVES|ENSG00000112276.9|blood vessel epicardial substance
hg19_v2_chr11_-_63439013_63439091	0.0812161	AAAGUGC	ENST00000398868.3|ATL3|ENSG00000184743.8|atlastin GTPase 3
hg19_v2_chr20_+_8112824_8112925	0.0812086	AAAGUGC	ENST00000378641.3|PLCB1|ENSG00000182621.12|phospholipase C, beta 1 (phosphoinositide-specific)
hg19_v2_chr2_+_192542850_192542872	0.0807144	AAAGUGC	ENST00000410026.2|NABP1|ENSG00000173559.8|nucleic acid binding protein 1
hg19_v2_chr1_+_28586006_28586044	0.0805991	AAAGUGC	ENST00000253063.3|SESN2|ENSG00000130766.4|sestrin 2
hg19_v2_chr7_-_141401951_141401985	0.0805991	AAAGUGC	ENST00000536163.1|KIAA1147|ENSG00000257093.2|KIAA1147
hg19_v2_chr3_+_179065474_179065530	0.0805627	AAAGUGC	ENST00000471841.1|MFN1|ENSG00000171109.14|mitofusin 1 	ENST00000280653.7|MFN1|ENSG00000171109.14|mitofusin 1
hg19_v2_chr13_+_42622781_42622889	0.0801082	AAAGUGC	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr2_+_200775971_200775988	0.0801018	AAAGUGC	ENST00000319974.5|C2orf69|ENSG00000178074.5|chromosome 2 open reading frame 69
hg19_v2_chr17_+_29718642_29718656	0.0800616	AAAGUGC	ENST00000325874.8|RAB11FIP4|ENSG00000131242.11|RAB11 family interacting protein 4 (class II)
hg19_v2_chr18_+_10454594_10454645	0.0799101	AAAGUGC	ENST00000355285.5|APCDD1|ENSG00000154856.8|adenomatosis polyposis coli down-regulated 1
hg19_v2_chr3_-_113415441_113415500	0.0795357	AAAGUGC	ENST00000491165.1|KIAA2018|ENSG00000176542.5|KIAA2018 	ENST00000316407.4|KIAA2018|ENSG00000176542.5|KIAA2018
hg19_v2_chrX_+_103411189_103411301	0.0791514	AAAGUGC	ENST00000493442.1|FAM199X|ENSG00000123575.8|family with sequence similarity 199, X-linked
hg19_v2_chr17_-_4167142_4167281	0.0787881	AAAGUGC	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr18_-_47721447_47721474	0.0783557	AAAGUGC	ENST00000285039.7|MYO5B|ENSG00000167306.14|myosin VB
hg19_v2_chr13_-_29292956_29293026	0.0777363	AAAGUGC	ENST00000266943.6|SLC46A3|ENSG00000139508.10|solute carrier family 46, member 3
hg19_v2_chr21_-_40685477_40685496	0.077685	AAAGUGC	ENST00000342449.3|BRWD1|ENSG00000185658.9|bromodomain and WD repeat domain containing 1
hg19_v2_chr5_+_140180635_140180783	0.0774765	AAAGUGC	ENST00000522353.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3 	ENST00000532566.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3
hg19_v2_chr12_+_66217911_66218018	0.0773442	AAAGUGC	ENST00000403681.2|HMGA2|ENSG00000149948.9|high mobility group AT-hook 2
hg19_v2_chr14_+_53196872_53196959	0.0770653	AAAGUGC	ENST00000442123.2|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein 	ENST00000354586.4|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein
hg19_v2_chr9_-_37576226_37576250	0.0769336	AAAGUGC	ENST00000432825.2|FBXO10|ENSG00000147912.8|F-box protein 10
hg19_v2_chr2_+_183989083_183989151	0.0766112	AAAGUGC	ENST00000295119.4|NUP35|ENSG00000163002.8|nucleoporin 35kDa
hg19_v2_chr2_+_10183651_10183713	0.0764507	AAAGUGC	ENST00000305883.1|KLF11|ENSG00000172059.6|Kruppel-like factor 11
hg19_v2_chr2_+_71295717_71295732	0.0764363	AAAGUGC	ENST00000418807.3|NAGK|ENSG00000124357.8|N-acetylglucosamine kinase 	ENST00000443872.2|NAGK|ENSG00000124357.8|N-acetylglucosamine kinase
hg19_v2_chr11_-_62314268_62314307	0.0760344	AAAGUGC	ENST00000257247.7|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein 	ENST00000531324.1|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein 	ENST00000378024.4|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein
hg19_v2_chr5_+_133706865_133706888	0.0757407	AAAGUGC	ENST00000265339.2|UBE2B|ENSG00000119048.3|ubiquitin-conjugating enzyme E2B
hg19_v2_chr20_+_9494987_9495027	0.0753433	AAAGUGC	ENST00000427562.2|LAMP5|ENSG00000125869.5|lysosomal-associated membrane protein family, member 5 	ENST00000246070.2|LAMP5|ENSG00000125869.5|lysosomal-associated membrane protein family, member 5
hg19_v2_chr14_+_57857262_57857334	0.0750924	AAAGUGC	ENST00000555166.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000556492.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000554703.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg19_v2_chr15_+_91643442_91643521	0.0750699	AAAGUGC	ENST00000394232.1|SV2B|ENSG00000185518.7|synaptic vesicle glycoprotein 2B
hg19_v2_chr16_+_81348528_81348578	0.0747714	AAAGUGC	ENST00000568107.2|GAN|ENSG00000261609.3|gigaxonin
hg19_v2_chr17_+_27717415_27717618	0.0747506	AAAGUGC	ENST00000583121.1|TAOK1|ENSG00000160551.5|TAO kinase 1 	ENST00000261716.3|TAOK1|ENSG00000160551.5|TAO kinase 1
hg19_v2_chr4_-_170924888_170924950	0.0743888	AAAGUGC	ENST00000502832.1|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like 	ENST00000393704.3|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like
hg19_v2_chr2_+_70142189_70142223	0.0743246	AAAGUGC	ENST00000264444.2|MXD1|ENSG00000059728.6|MAX dimerization protein 1
hg19_v2_chr10_+_120789223_120789231	0.073119	AAAGUGC	ENST00000425699.1|NANOS1|ENSG00000188613.5|nanos homolog 1 (Drosophila)
hg19_v2_chr3_+_140950612_140950736	0.073079	AAAGUGC	ENST00000286353.4|ACPL2|ENSG00000155893.7|acid phosphatase-like 2 	ENST00000502783.1|ACPL2|ENSG00000155893.7|acid phosphatase-like 2 	ENST00000393010.2|ACPL2|ENSG00000155893.7|acid phosphatase-like 2 	ENST00000514680.1|ACPL2|ENSG00000155893.7|acid phosphatase-like 2
hg19_v2_chr3_-_72496035_72496069	0.0730574	AAAGUGC	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr3_-_178984759_178984790	0.0726269	AAAGUGC	ENST00000349697.2|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3 	ENST00000497599.1|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v2_chr12_+_45609893_45609909	0.0721963	AAAGUGC	ENST00000320560.8|ANO6|ENSG00000177119.11|anoctamin 6
hg19_v2_chr11_-_108093329_108093375	0.0720456	AAAGUGC	ENST00000278612.8|NPAT|ENSG00000149308.12|nuclear protein, ataxia-telangiectasia locus
hg19_v2_chr10_+_76871454_76871467	0.0718508	AAAGUGC	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr5_+_140248518_140248689	0.0715706	AAAGUGC	ENST00000398640.2|PCDHA11|ENSG00000249158.2|protocadherin alpha 11
hg19_v2_chr17_+_2496971_2497040	0.0710408	AAAGUGC	ENST00000397195.5|PAFAH1B1|ENSG00000007168.8|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg19_v2_chr14_-_91526922_91527001	0.0698	AAAGUGC	ENST00000418736.2|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5 	ENST00000261991.3|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5
hg19_v2_chr21_-_43346790_43346823	0.0691313	AAAGUGC	ENST00000329623.7|C2CD2|ENSG00000157617.12|C2 calcium-dependent domain containing 2
hg19_v2_chr7_+_108210012_108210012	0.0684221	AAAGUGC	ENST00000249356.3|DNAJB9|ENSG00000128590.4|DnaJ (Hsp40) homolog, subfamily B, member 9
hg19_v2_chr17_-_38083843_38083864	0.0682265	AAAGUGC	ENST00000304046.2|ORMDL3|ENSG00000172057.5|ORM1-like 3 (S. cerevisiae) 	ENST00000579695.1|ORMDL3|ENSG00000172057.5|ORM1-like 3 (S. cerevisiae)
hg19_v2_chr8_+_38614807_38614851	0.0680137	AAAGUGC	ENST00000330691.6|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000348567.4|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr3_-_149688896_149688970	0.0674036	AAAGUGC	ENST00000239940.7|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr11_-_94964354_94964374	0.0673671	AAAGUGC	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr12_-_44200052_44200136	0.0672118	AAAGUGC	ENST00000548315.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000552521.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000546662.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000548403.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000546506.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1
hg19_v2_chr14_-_35182994_35183034	0.0670016	AAAGUGC	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr2_+_26256938_26257031	0.066177	AAAGUGC	ENST00000264710.4|RAB10|ENSG00000084733.6|RAB10, member RAS oncogene family
hg19_v2_chr5_+_172483347_172483407	0.0657284	AAAGUGC	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr1_+_42846443_42846502	0.0656513	AAAGUGC	ENST00000410070.2|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A 	ENST00000431473.3|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A
hg19_v2_chr18_-_72921303_72921339	0.0653204	AAAGUGC	ENST00000322342.3|ZADH2|ENSG00000180011.6|zinc binding alcohol dehydrogenase domain containing 2
hg19_v2_chr16_-_67450325_67450406	0.0652981	AAAGUGC	ENST00000348579.2|ZDHHC1|ENSG00000159714.6|zinc finger, DHHC-type containing 1
hg19_v2_chr1_+_162467595_162467655	0.0642267	AAAGUGC	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr2_-_20251744_20251790	0.0638687	AAAGUGC	ENST00000175091.4|LAPTM4A|ENSG00000068697.6|lysosomal protein transmembrane 4 alpha
hg19_v2_chr4_-_39640700_39640712	0.0633807	AAAGUGC	ENST00000295958.5|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr2_-_204400113_204400149	0.0630223	AAAGUGC	ENST00000319170.5|RAPH1|ENSG00000173166.13|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
hg19_v2_chr17_+_7184986_7185076	0.0627317	AAAGUGC	ENST00000317370.8|SLC2A4|ENSG00000181856.10|solute carrier family 2 (facilitated glucose transporter), member 4 	ENST00000571308.1|SLC2A4|ENSG00000181856.10|solute carrier family 2 (facilitated glucose transporter), member 4
hg19_v2_chr6_+_36646435_36646498	0.062586	AAAGUGC	ENST00000244741.5|CDKN1A|ENSG00000124762.9|cyclin-dependent kinase inhibitor 1A (p21, Cip1) 	ENST00000405375.1|CDKN1A|ENSG00000124762.9|cyclin-dependent kinase inhibitor 1A (p21, Cip1) 	ENST00000373711.2|CDKN1A|ENSG00000124762.9|cyclin-dependent kinase inhibitor 1A (p21, Cip1)
hg19_v2_chr2_+_46844290_46844384	0.0618405	AAAGUGC	ENST00000238892.3|CRIPT|ENSG00000119878.5|cysteine-rich PDZ-binding protein
hg19_v2_chr4_-_78740511_78740544	0.0614003	AAAGUGC	ENST00000504123.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000264903.4|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000515441.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like
hg19_v2_chr17_-_5389477_5389537	0.060926	AAAGUGC	ENST00000572834.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000570848.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000571971.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000158771.4|DERL2|ENSG00000072849.6|derlin 2
hg19_v2_chr9_-_99180597_99180614	0.0607975	AAAGUGC	ENST00000375256.4|ZNF367|ENSG00000165244.6|zinc finger protein 367
hg19_v2_chr13_+_49550015_49550070	0.0604023	AAAGUGC	ENST00000492622.2|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr4_-_85887503_85887544	0.0602723	AAAGUGC	ENST00000509172.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000322366.6|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000295888.4|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000502713.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3
hg19_v2_chr3_+_107241783_107241850	0.0602467	AAAGUGC	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr8_-_52811640_52811696	0.0600617	AAAGUGC	ENST00000360540.5|PCMTD1|ENSG00000168300.9|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 	ENST00000521344.1|PCMTD1|ENSG00000168300.9|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
hg19_v2_chr17_-_47841485_47841529	0.0599651	AAAGUGC	ENST00000506156.1|FAM117A|ENSG00000121104.3|family with sequence similarity 117, member A 	ENST00000240364.2|FAM117A|ENSG00000121104.3|family with sequence similarity 117, member A
hg19_v2_chrX_+_14891522_14891593	0.0595868	AAAGUGC	ENST00000380492.3|MOSPD2|ENSG00000130150.7|motile sperm domain containing 2 	ENST00000482354.1|MOSPD2|ENSG00000130150.7|motile sperm domain containing 2
hg19_v2_chr10_+_20105157_20105184	0.0590275	AAAGUGC	ENST00000377242.3|PLXDC2|ENSG00000120594.12|plexin domain containing 2 	ENST00000377252.4|PLXDC2|ENSG00000120594.12|plexin domain containing 2
hg19_v2_chr5_-_65017921_65017968	0.0585225	AAAGUGC	ENST00000381007.4|SGTB|ENSG00000197860.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
hg19_v2_chr3_-_183966717_183966764	0.0582276	AAAGUGC	ENST00000446569.1|ALG3|ENSG00000214160.5|ALG3, alpha-1,3- mannosyltransferase 	ENST00000418734.2|ALG3|ENSG00000214160.5|ALG3, alpha-1,3- mannosyltransferase 	ENST00000397676.3|ALG3|ENSG00000214160.5|ALG3, alpha-1,3- mannosyltransferase
hg19_v2_chr3_-_27498235_27498278	0.0580352	AAAGUGC	ENST00000295736.5|SLC4A7|ENSG00000033867.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7 	ENST00000428386.1|SLC4A7|ENSG00000033867.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7 	ENST00000428179.1|SLC4A7|ENSG00000033867.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7
hg19_v2_chr15_-_61521495_61521518	0.0568847	AAAGUGC	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr3_+_137906109_137906153	0.0565336	AAAGUGC	ENST00000481646.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000469044.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000491704.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000461600.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8
hg19_v2_chr5_-_133968529_133968678	0.0564442	AAAGUGC	ENST00000402673.2|SAR1B|ENSG00000152700.9|SAR1 homolog B (S. cerevisiae)
hg19_v2_chr1_+_47799446_47799493	0.0557325	AAAGUGC	ENST00000371873.5|CMPK1|ENSG00000162368.9|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg19_v2_chr4_-_36246060_36246167	0.0557136	AAAGUGC	ENST00000303965.4|ARAP2|ENSG00000047365.7|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
hg19_v2_chr11_+_121322832_121322912	0.0556565	AAAGUGC	ENST00000260197.7|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing
hg19_v2_chr5_+_179247759_179247921	0.0555872	AAAGUGC	ENST00000389805.4|SQSTM1|ENSG00000161011.15|sequestosome 1 	ENST00000504627.1|SQSTM1|ENSG00000161011.15|sequestosome 1 	ENST00000402874.3|SQSTM1|ENSG00000161011.15|sequestosome 1 	ENST00000510187.1|SQSTM1|ENSG00000161011.15|sequestosome 1
hg19_v2_chr8_-_9008206_9008222	0.0553746	AAAGUGC	ENST00000310455.3|PPP1R3B|ENSG00000173281.4|protein phosphatase 1, regulatory subunit 3B
hg19_v2_chr4_+_87856129_87856186	0.0553126	AAAGUGC	ENST00000395146.4|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1 	ENST00000507468.1|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1
hg19_v2_chr14_-_92506371_92506418	0.0551118	AAAGUGC	ENST00000267622.4|TRIP11|ENSG00000100815.8|thyroid hormone receptor interactor 11
hg19_v2_chr16_-_2264779_2264847	0.0550321	AAAGUGC	ENST00000333503.7|PGP|ENSG00000184207.8|phosphoglycolate phosphatase
hg19_v2_chr8_-_57123815_57123867	0.0547592	AAAGUGC	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr17_-_43568062_43568110	0.0544646	AAAGUGC	ENST00000421073.2|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000584420.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000589780.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000430334.3|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1
hg19_v2_chr4_+_81187753_81187827	0.0542848	AAAGUGC	ENST00000312465.7|FGF5|ENSG00000138675.12|fibroblast growth factor 5 	ENST00000456523.3|FGF5|ENSG00000138675.12|fibroblast growth factor 5
hg19_v2_chr16_-_53537105_53537163	0.0541992	AAAGUGC	ENST00000568596.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000570004.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000564497.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000300245.4|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000394657.7|AKTIP|ENSG00000166971.12|AKT interacting protein
hg19_v2_chr12_+_32655048_32655108	0.0541559	AAAGUGC	ENST00000427716.2|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4 	ENST00000266482.3|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4
hg19_v2_chr1_+_89149905_89149995	0.0540704	AAAGUGC	ENST00000316005.7|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370521.3|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370505.3|PKN2|ENSG00000065243.14|protein kinase N2
hg19_v2_chr17_+_16593539_16593639	0.0536099	AAAGUGC	ENST00000340621.5|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000399273.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000443444.2|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000360524.8|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000456009.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A
hg19_v2_chr13_+_39612442_39612482	0.0536084	AAAGUGC	ENST00000470258.1|NHLRC3|ENSG00000188811.8|NHL repeat containing 3 	ENST00000379600.3|NHLRC3|ENSG00000188811.8|NHL repeat containing 3
hg19_v2_chr14_+_60715928_60716007	0.0531998	AAAGUGC	ENST00000395076.4|PPM1A|ENSG00000100614.13|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v2_chr2_-_69870835_69870853	0.0522851	AAAGUGC	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr9_+_108210279_108210435	0.0522429	AAAGUGC	ENST00000374716.4|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000374710.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000481272.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000484973.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000394926.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000539376.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like
hg19_v2_chr9_+_128509624_128509658	0.0519799	AAAGUGC	ENST00000342287.5|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3 	ENST00000373487.4|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3
hg19_v2_chr2_-_106810783_106810795	0.0519618	AAAGUGC	ENST00000283148.7|UXS1|ENSG00000115652.10|UDP-glucuronate decarboxylase 1
hg19_v2_chr20_+_1875110_1875154	0.0519332	AAAGUGC	ENST00000400068.3|SIRPA|ENSG00000198053.7|signal-regulatory protein alpha
hg19_v2_chr1_+_19923454_19923561	0.0512949	AAAGUGC	ENST00000602662.1|MINOS1-NBL1|ENSG00000270136.1|MINOS1-NBL1 readthrough 	ENST00000322753.6|MINOS1|ENSG00000173436.9|mitochondrial inner membrane organizing system 1 	ENST00000602293.1|MINOS1-NBL1|ENSG00000270136.1|MINOS1-NBL1 readthrough
hg19_v2_chr2_+_203879568_203879611	0.0512076	AAAGUGC	ENST00000449802.1|NBEAL1|ENSG00000144426.14|neurobeachin-like 1
hg19_v2_chr4_+_156588350_156588406	0.0509388	AAAGUGC	ENST00000296518.7|GUCY1A3|ENSG00000164116.12|guanylate cyclase 1, soluble, alpha 3
hg19_v2_chr16_-_71323271_71323512	0.0506349	AAAGUGC	ENST00000565850.1|CMTR2|ENSG00000180917.12|cap methyltransferase 2 	ENST00000568910.1|CMTR2|ENSG00000180917.12|cap methyltransferase 2 	ENST00000434935.2|CMTR2|ENSG00000180917.12|cap methyltransferase 2 	ENST00000338099.5|CMTR2|ENSG00000180917.12|cap methyltransferase 2
hg19_v2_chr11_+_119019722_119019769	0.0502434	AAAGUGC	ENST00000307417.3|ABCG4|ENSG00000172350.5|ATP-binding cassette, sub-family G (WHITE), member 4
hg19_v2_chr11_+_111473108_111473226	0.0500982	AAAGUGC	ENST00000304987.3|SIK2|ENSG00000170145.4|salt-inducible kinase 2
hg19_v2_chr14_-_99737565_99737617	0.0500151	AAAGUGC	ENST00000357195.3|BCL11B|ENSG00000127152.13|B-cell CLL/lymphoma 11B (zinc finger protein)
hg19_v2_chr13_+_48877895_48877929	0.0494261	AAAGUGC	ENST00000267163.4|RB1|ENSG00000139687.9|retinoblastoma 1
hg19_v2_chr19_+_7459998_7460046	0.0494117	AAAGUGC	ENST00000319670.9|ARHGEF18|ENSG00000104880.13|Rho/Rac guanine nucleotide exchange factor (GEF) 18 	ENST00000599752.1|ARHGEF18|ENSG00000104880.13|Rho/Rac guanine nucleotide exchange factor (GEF) 18
hg19_v2_chr8_-_27630102_27630172	0.0492294	AAAGUGC	ENST00000356537.4|CCDC25|ENSG00000147419.12|coiled-coil domain containing 25 	ENST00000522915.1|CCDC25|ENSG00000147419.12|coiled-coil domain containing 25 	ENST00000539095.1|CCDC25|ENSG00000147419.12|coiled-coil domain containing 25
hg19_v2_chr12_+_72233487_72233563	0.0489951	AAAGUGC	ENST00000482439.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000550746.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000491063.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000319106.8|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000485960.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000393309.3|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15
hg19_v2_chr14_-_38064198_38064239	0.0488113	AAAGUGC	ENST00000250448.2|FOXA1|ENSG00000129514.4|forkhead box A1
hg19_v2_chr18_-_21242833_21242888	0.048244	AAAGUGC	ENST00000586087.1|ANKRD29|ENSG00000154065.12|ankyrin repeat domain 29 	ENST00000592179.1|ANKRD29|ENSG00000154065.12|ankyrin repeat domain 29
hg19_v2_chr11_+_9406169_9406210	0.0480957	AAAGUGC	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr10_+_116581503_116581570	0.0478616	AAAGUGC	ENST00000369248.4|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369250.3|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369246.1|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1
hg19_v2_chr6_-_16761678_16761721	0.0475665	AAAGUGC	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr3_-_195163803_195163826	0.0468273	AAAGUGC	ENST00000326793.6|ACAP2|ENSG00000114331.8|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
hg19_v2_chr1_-_114355083_114355123	0.0467184	AAAGUGC	ENST00000261441.5|RSBN1|ENSG00000081019.9|round spermatid basic protein 1
hg19_v2_chr2_+_169312350_169312372	0.0465971	AAAGUGC	ENST00000305747.6|CERS6|ENSG00000172292.10|ceramide synthase 6
hg19_v2_chr1_+_201924619_201924652	0.0465499	AAAGUGC	ENST00000367287.4|TIMM17A|ENSG00000134375.6|translocase of inner mitochondrial membrane 17 homolog A (yeast)
hg19_v2_chr9_+_74764340_74764392	0.0463879	AAAGUGC	ENST00000376986.1|GDA|ENSG00000119125.12|guanine deaminase 	ENST00000358399.3|GDA|ENSG00000119125.12|guanine deaminase
hg19_v2_chr2_+_16080659_16080686	0.0461887	AAAGUGC	ENST00000281043.3|MYCN|ENSG00000134323.10|v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
hg19_v2_chr7_-_152133059_152133102	0.0460116	AAAGUGC	ENST00000262189.6|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C 	ENST00000355193.2|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C
hg19_v2_chr10_+_23728198_23728231	0.0459328	AAAGUGC	ENST00000376495.3|OTUD1|ENSG00000165312.5|OTU domain containing 1
hg19_v2_chr6_-_24489842_24489859	0.0458089	AAAGUGC	ENST00000230036.1|GPLD1|ENSG00000112293.10|glycosylphosphatidylinositol specific phospholipase D1
hg19_v2_chr4_+_144257915_144258009	0.0457554	AAAGUGC	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr7_-_150777874_150777918	0.045063	AAAGUGC	ENST00000540185.1|FASTK|ENSG00000164896.15|Fas-activated serine/threonine kinase
hg19_v2_chr2_+_111878483_111878506	0.0450049	AAAGUGC	ENST00000308659.8|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000357757.2|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000393253.2|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000337565.5|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000393256.3|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator)
hg19_v2_chr3_+_119013185_119013306	0.0445251	AAAGUGC	ENST00000264245.4|ARHGAP31|ENSG00000031081.6|Rho GTPase activating protein 31
hg19_v2_chr19_-_2050852_2050895	0.0444746	AAAGUGC	ENST00000541165.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000591601.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2
hg19_v2_chr10_+_63422695_63422755	0.0443938	AAAGUGC	ENST00000330194.2|C10orf107|ENSG00000183346.6|chromosome 10 open reading frame 107 	ENST00000389639.3|C10orf107|ENSG00000183346.6|chromosome 10 open reading frame 107
hg19_v2_chr18_+_21269404_21269427	0.0442335	AAAGUGC	ENST00000313654.9|LAMA3|ENSG00000053747.11|laminin, alpha 3
hg19_v2_chr22_+_25465786_25465936	0.0441751	AAAGUGC	ENST00000401395.1|KIAA1671|ENSG00000197077.8|KIAA1671
hg19_v2_chr6_-_46138676_46138726	0.0440074	AAAGUGC	ENST00000371383.2|ENPP5|ENSG00000112796.5|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 	ENST00000230565.3|ENPP5|ENSG00000112796.5|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)
hg19_v2_chr18_-_5296001_5296045	0.0435072	AAAGUGC	ENST00000357006.4|ZBTB14|ENSG00000198081.6|zinc finger and BTB domain containing 14
hg19_v2_chr16_+_31483451_31483529	0.0433539	AAAGUGC	ENST00000565360.1|TGFB1I1|ENSG00000140682.14|transforming growth factor beta 1 induced transcript 1 	ENST00000361773.3|TGFB1I1|ENSG00000140682.14|transforming growth factor beta 1 induced transcript 1
hg19_v2_chr8_+_8860314_8860388	0.0433059	AAAGUGC	ENST00000250263.7|ERI1|ENSG00000104626.10|exoribonuclease 1 	ENST00000519292.1|ERI1|ENSG00000104626.10|exoribonuclease 1
hg19_v2_chrX_+_122993827_122993910	0.0428854	AAAGUGC	ENST00000371199.3|XIAP|ENSG00000101966.8|X-linked inhibitor of apoptosis
hg19_v2_chrX_-_57937067_57937067	0.0428187	AAAGUGC	ENST00000358697.4|ZXDA|ENSG00000198205.5|zinc finger, X-linked, duplicated A
hg19_v2_chr10_+_97803151_97803348	0.0422408	AAAGUGC	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr20_+_43104508_43104540	0.0421103	AAAGUGC	ENST00000262605.4|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like 	ENST00000372904.3|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like
hg19_v2_chr4_+_72204755_72204778	0.0420976	AAAGUGC	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chrX_+_37208521_37208539	0.0416107	AAAGUGC	ENST00000378628.4|PRRG1|ENSG00000130962.13|proline rich Gla (G-carboxyglutamic acid) 1
hg19_v2_chr17_-_4890919_4890985	0.0412478	AAAGUGC	ENST00000572543.1|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2 	ENST00000381311.5|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2 	ENST00000348066.3|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2 	ENST00000358183.4|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2
hg19_v2_chr2_-_68479614_68479685	0.0411358	AAAGUGC	ENST00000234310.3|PPP3R1|ENSG00000221823.6|protein phosphatase 3, regulatory subunit B, alpha
hg19_v2_chr1_+_76540386_76540445	0.0408677	AAAGUGC	ENST00000328299.3|ST6GALNAC3|ENSG00000184005.9|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg19_v2_chr16_-_3493528_3493542	0.0407908	AAAGUGC	ENST00000301744.4|ZNF597|ENSG00000167981.4|zinc finger protein 597
hg19_v2_chr22_+_40573921_40573946	0.0402811	AAAGUGC	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr6_+_170102210_170102275	0.0400762	AAAGUGC	ENST00000439249.1|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120 	ENST00000332290.2|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120
hg19_v2_chr2_-_26101374_26101389	0.0395546	AAAGUGC	ENST00000435504.4|ASXL2|ENSG00000143970.12|additional sex combs like 2 (Drosophila)
hg19_v2_chr1_-_184943610_184943682	0.0393071	AAAGUGC	ENST00000367511.3|FAM129A|ENSG00000135842.12|family with sequence similarity 129, member A
hg19_v2_chr3_+_140660634_140660729	0.038672	AAAGUGC	ENST00000446041.2|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000507429.1|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000324194.6|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36
hg19_v2_chr16_-_1464688_1464752	0.0384213	AAAGUGC	ENST00000389221.4|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000508903.2|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000397462.1|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000301712.5|UNKL|ENSG00000059145.14|unkempt family zinc finger-like
hg19_v2_chr3_-_169899504_169899542	0.0382435	AAAGUGC	ENST00000474275.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000484931.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000494943.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000497658.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000465896.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000475729.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000495893.2|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000481639.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000467570.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000466189.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila)
hg19_v2_chr11_-_67980744_67980882	0.0379709	AAAGUGC	ENST00000401547.2|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000453170.1|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000304363.4|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila)
hg19_v2_chr7_-_112579869_112579971	0.037797	AAAGUGC	ENST00000297145.4|C7orf60|ENSG00000164603.7|chromosome 7 open reading frame 60
hg19_v2_chr20_-_52210368_52210384	0.0375349	AAAGUGC	ENST00000371471.2|ZNF217|ENSG00000171940.9|zinc finger protein 217
hg19_v2_chr16_+_1662326_1662442	0.036628	AAAGUGC	ENST00000397412.3|CRAMP1L|ENSG00000007545.11|Crm, cramped-like (Drosophila)
hg19_v2_chr8_-_103425047_103425069	0.0366189	AAAGUGC	ENST00000520539.1|UBR5|ENSG00000104517.8|ubiquitin protein ligase E3 component n-recognin 5
hg19_v2_chr2_+_97481974_97482015	0.0365959	AAAGUGC	ENST00000377060.3|CNNM3|ENSG00000168763.11|cyclin M3 	ENST00000305510.3|CNNM3|ENSG00000168763.11|cyclin M3
hg19_v2_chr3_+_126707437_126707437	0.0365169	AAAGUGC	ENST00000393409.2|PLXNA1|ENSG00000114554.7|plexin A1 	ENST00000251772.4|PLXNA1|ENSG00000114554.7|plexin A1
hg19_v2_chr2_-_197036289_197036314	0.0364955	AAAGUGC	ENST00000263955.4|STK17B|ENSG00000081320.6|serine/threonine kinase 17b
hg19_v2_chr15_+_76135622_76135719	0.036232	AAAGUGC	ENST00000338677.4|UBE2Q2|ENSG00000140367.7|ubiquitin-conjugating enzyme E2Q family member 2 	ENST00000267938.4|UBE2Q2|ENSG00000140367.7|ubiquitin-conjugating enzyme E2Q family member 2 	ENST00000569423.1|UBE2Q2|ENSG00000140367.7|ubiquitin-conjugating enzyme E2Q family member 2
hg19_v2_chr6_+_108616054_108616100	0.0361992	AAAGUGC	ENST00000368977.4|LACE1|ENSG00000135537.12|lactation elevated 1
hg19_v2_chr2_+_103236004_103236166	0.035761	AAAGUGC	ENST00000233969.2|SLC9A2|ENSG00000115616.2|solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2
hg19_v2_chr3_-_121264848_121264859	0.0357056	AAAGUGC	ENST00000264233.5|POLQ|ENSG00000051341.9|polymerase (DNA directed), theta
hg19_v2_chr13_-_30881621_30881675	0.0354637	AAAGUGC	ENST00000380615.3|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1
hg19_v2_chr6_+_49431073_49431135	0.0351581	AAAGUGC	ENST00000335783.3|CENPQ|ENSG00000031691.6|centromere protein Q
hg19_v2_chr12_-_9102549_9102591	0.0347559	AAAGUGC	ENST00000000412.3|M6PR|ENSG00000003056.3|mannose-6-phosphate receptor (cation dependent)
hg19_v2_chr6_-_111804393_111804436	0.0345758	AAAGUGC	ENST00000368802.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000368805.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chr6_-_119256279_119256308	0.0345693	AAAGUGC	ENST00000316068.3|MCM9|ENSG00000111877.13|minichromosome maintenance complex component 9
hg19_v2_chr11_-_129872712_129872755	0.03448	AAAGUGC	ENST00000358825.5|PRDM10|ENSG00000170325.10|PR domain containing 10 	ENST00000360871.3|PRDM10|ENSG00000170325.10|PR domain containing 10 	ENST00000528746.1|PRDM10|ENSG00000170325.10|PR domain containing 10
hg19_v2_chr4_-_89744457_89744512	0.0344548	AAAGUGC	ENST00000395002.2|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr10_-_23003460_23003562	0.0343856	AAAGUGC	ENST00000376573.4|PIP4K2A|ENSG00000150867.9|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
hg19_v2_chr2_+_182321925_182321952	0.0342038	AAAGUGC	ENST00000339307.4|ITGA4|ENSG00000115232.9|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) 	ENST00000397033.2|ITGA4|ENSG00000115232.9|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)
hg19_v2_chr9_-_101471479_101471522	0.0341944	AAAGUGC	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr16_+_22019404_22019604	0.0339052	AAAGUGC	ENST00000542527.2|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000569656.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000562695.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52
hg19_v2_chr13_+_42846272_42846334	0.0337175	AAAGUGC	ENST00000025301.2|AKAP11|ENSG00000023516.7|A kinase (PRKA) anchor protein 11
hg19_v2_chrX_+_133507327_133507386	0.0335706	AAAGUGC	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chr14_-_68283291_68283323	0.0335384	AAAGUGC	ENST00000555452.1|ZFYVE26|ENSG00000072121.11|zinc finger, FYVE domain containing 26 	ENST00000347230.4|ZFYVE26|ENSG00000072121.11|zinc finger, FYVE domain containing 26
hg19_v2_chr11_+_69455855_69455974	0.0334859	AAAGUGC	ENST00000227507.2|CCND1|ENSG00000110092.3|cyclin D1 	ENST00000536559.1|CCND1|ENSG00000110092.3|cyclin D1
hg19_v2_chr11_+_118401706_118401803	0.0334562	AAAGUGC	ENST00000411589.2|TMEM25|ENSG00000149582.11|transmembrane protein 25 	ENST00000442938.2|TMEM25|ENSG00000149582.11|transmembrane protein 25 	ENST00000359862.4|TMEM25|ENSG00000149582.11|transmembrane protein 25
hg19_v2_chr13_-_77601282_77601308	0.0334438	AAAGUGC	ENST00000355619.5|FBXL3|ENSG00000005812.6|F-box and leucine-rich repeat protein 3
hg19_v2_chr5_+_139493665_139493718	0.0333731	AAAGUGC	ENST00000331327.3|PURA|ENSG00000185129.4|purine-rich element binding protein A
hg19_v2_chr4_+_55095264_55095390	0.033228	AAAGUGC	ENST00000257290.5|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chr1_-_47697387_47697457	0.0332129	AAAGUGC	ENST00000371884.2|TAL1|ENSG00000162367.7|T-cell acute lymphocytic leukemia 1
hg19_v2_chr6_-_89827720_89827805	0.0329061	AAAGUGC	ENST00000452027.2|SRSF12|ENSG00000154548.8|serine/arginine-rich splicing factor 12
hg19_v2_chr21_-_34852304_34852318	0.0325791	AAAGUGC	ENST00000542230.2|TMEM50B|ENSG00000142188.12|transmembrane protein 50B
hg19_v2_chr3_-_155572164_155572236	0.0322436	AAAGUGC	ENST00000392845.3|SLC33A1|ENSG00000169359.9|solute carrier family 33 (acetyl-CoA transporter), member 1 	ENST00000359479.3|SLC33A1|ENSG00000169359.9|solute carrier family 33 (acetyl-CoA transporter), member 1
hg19_v2_chr21_-_34863998_34864060	0.0321667	AAAGUGC	ENST00000402202.1|DNAJC28|ENSG00000177692.7|DnaJ (Hsp40) homolog, subfamily C, member 28 	ENST00000381947.3|DNAJC28|ENSG00000177692.7|DnaJ (Hsp40) homolog, subfamily C, member 28
hg19_v2_chr3_+_57261743_57261824	0.0319466	AAAGUGC	ENST00000288266.3|APPL1|ENSG00000157500.6|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
hg19_v2_chr8_+_28747884_28747938	0.0319037	AAAGUGC	ENST00000287701.10|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000444075.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000403668.2|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000519662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000558662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000523613.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000560599.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000397358.3|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chrX_+_16964794_16964861	0.0318804	AAAGUGC	ENST00000357277.3|REPS2|ENSG00000169891.13|RALBP1 associated Eps domain containing 2
hg19_v2_chr19_+_36208877_36208921	0.0315911	AAAGUGC	ENST00000420124.1|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B  	ENST00000222270.7|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B  	ENST00000341701.1|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B
hg19_v2_chr11_-_64684672_64684722	0.0315344	AAAGUGC	ENST00000377264.3|ATG2A|ENSG00000110046.8|autophagy related 2A 	ENST00000421419.2|ATG2A|ENSG00000110046.8|autophagy related 2A
hg19_v2_chr5_-_168006591_168006638	0.0312325	AAAGUGC	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr15_+_68871308_68871354	0.0307882	AAAGUGC	ENST00000261861.5|CORO2B|ENSG00000103647.8|coronin, actin binding protein, 2B
hg19_v2_chr17_-_46806540_46806558	0.0303235	AAAGUGC	ENST00000290295.7|HOXB13|ENSG00000159184.7|homeobox B13
hg19_v2_chr17_+_44928946_44928953	0.0300721	AAAGUGC	ENST00000290015.2|WNT9B|ENSG00000158955.6|wingless-type MMTV integration site family, member 9B 	ENST00000393461.2|WNT9B|ENSG00000158955.6|wingless-type MMTV integration site family, member 9B
hg19_v2_chr5_+_159343688_159343790	0.0299272	AAAGUGC	ENST00000306675.3|ADRA1B|ENSG00000170214.3|adrenoceptor alpha 1B
hg19_v2_chr2_+_219246746_219246759	0.0297257	AAAGUGC	ENST00000233202.6|SLC11A1|ENSG00000018280.12|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1
hg19_v2_chr12_+_50135588_50135605	0.0297172	AAAGUGC	ENST00000423828.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000550445.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6
hg19_v2_chr6_+_16129308_16129402	0.0296213	AAAGUGC	ENST00000356840.3|MYLIP|ENSG00000007944.10|myosin regulatory light chain interacting protein 	ENST00000349606.4|MYLIP|ENSG00000007944.10|myosin regulatory light chain interacting protein
hg19_v2_chr1_+_33722080_33722174	0.0295972	AAAGUGC	ENST00000483388.1|ZNF362|ENSG00000160094.10|zinc finger protein 362 	ENST00000539719.1|ZNF362|ENSG00000160094.10|zinc finger protein 362
hg19_v2_chr17_+_38278530_38278605	0.0294097	AAAGUGC	ENST00000398532.4|MSL1|ENSG00000188895.7|male-specific lethal 1 homolog (Drosophila)
hg19_v2_chr17_+_5031687_5031687	0.0293421	AAAGUGC	ENST00000250066.6|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene) 	ENST00000304328.5|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene)
hg19_v2_chr1_+_3607228_3607250	0.0291875	AAAGUGC	ENST00000378285.1|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000378280.1|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000378288.4|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr21_-_36260980_36261011	0.0290822	AAAGUGC	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr13_+_93879085_93879136	0.0290785	AAAGUGC	ENST00000377047.4|GPC6|ENSG00000183098.6|glypican 6
hg19_v2_chr1_-_231560790_231560790	0.0289539	AAAGUGC	ENST00000366641.3|EGLN1|ENSG00000135766.8|egl-9 family hypoxia-inducible factor 1
hg19_v2_chr2_+_29338236_29338439	0.0288204	AAAGUGC	ENST00000320081.5|CLIP4|ENSG00000115295.15|CAP-GLY domain containing linker protein family, member 4
hg19_v2_chr1_-_212004090_212004168	0.0287166	AAAGUGC	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chrX_-_83442915_83442985	0.0287125	AAAGUGC	ENST00000262752.2|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6 	ENST00000543399.1|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6
hg19_v2_chr17_-_37764128_37764258	0.0286859	AAAGUGC	ENST00000302584.4|NEUROD2|ENSG00000171532.4|neuronal differentiation 2
hg19_v2_chr9_-_36400213_36400296	0.02866	AAAGUGC	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr1_-_70671216_70671303	0.0286442	AAAGUGC	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr1_+_210001309_210001411	0.0285807	AAAGUGC	ENST00000491415.2|DIEXF|ENSG00000117597.13|digestive organ expansion factor homolog (zebrafish)
hg19_v2_chr10_-_120514720_120514758	0.0282218	AAAGUGC	ENST00000369151.3|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1 	ENST00000340214.4|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1
hg19_v2_chr17_-_79876010_79876075	0.0281707	AAAGUGC	ENST00000328666.6|SIRT7|ENSG00000187531.9|sirtuin 7
hg19_v2_chr12_+_68042495_68042508	0.0281305	AAAGUGC	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr8_-_17104356_17104395	0.0275166	AAAGUGC	ENST00000361272.4|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7 	ENST00000523917.1|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7
hg19_v2_chr10_-_46030841_46030846	0.0274672	AAAGUGC	ENST00000453424.2|MARCH8|ENSG00000165406.11|membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
hg19_v2_chr11_-_13484713_13484850	0.0274295	AAAGUGC	ENST00000526841.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000529708.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000278174.5|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000528120.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10
hg19_v2_chr7_+_129074266_129074306	0.0273644	AAAGUGC	ENST00000249344.2|STRIP2|ENSG00000128578.5|striatin interacting protein 2 	ENST00000435494.2|STRIP2|ENSG00000128578.5|striatin interacting protein 2
hg19_v2_chr22_-_24093267_24093327	0.0270202	AAAGUGC	ENST00000341976.3|ZNF70|ENSG00000187792.3|zinc finger protein 70
hg19_v2_chr16_-_2185899_2185899	0.026992	AAAGUGC	ENST00000262304.4|PKD1|ENSG00000008710.13|polycystic kidney disease 1 (autosomal dominant) 	ENST00000423118.1|PKD1|ENSG00000008710.13|polycystic kidney disease 1 (autosomal dominant)
hg19_v2_chr2_-_218808771_218808851	0.0266663	AAAGUGC	ENST00000449814.1|TNS1|ENSG00000079308.12|tensin 1 	ENST00000171887.4|TNS1|ENSG00000079308.12|tensin 1
hg19_v2_chr1_-_53793584_53793719	0.0266264	AAAGUGC	ENST00000354412.3|LRP8|ENSG00000157193.10|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor 	ENST00000347547.2|LRP8|ENSG00000157193.10|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor 	ENST00000306052.6|LRP8|ENSG00000157193.10|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg19_v2_chr2_+_27193480_27193548	0.0265805	AAAGUGC	ENST00000233121.2|MAPRE3|ENSG00000084764.6|microtubule-associated protein, RP/EB family, member 3 	ENST00000405074.3|MAPRE3|ENSG00000084764.6|microtubule-associated protein, RP/EB family, member 3
hg19_v2_chr16_+_69221028_69221092	0.0265396	AAAGUGC	ENST00000336278.4|SNTB2|ENSG00000168807.12|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg19_v2_chr1_-_113249948_113250056	0.0265272	AAAGUGC	ENST00000339083.7|RHOC|ENSG00000155366.12|ras homolog family member C 	ENST00000369642.3|RHOC|ENSG00000155366.12|ras homolog family member C
hg19_v2_chr5_+_150827143_150827196	0.02642	AAAGUGC	ENST00000243389.3|SLC36A1|ENSG00000123643.8|solute carrier family 36 (proton/amino acid symporter), member 1 	ENST00000517945.1|SLC36A1|ENSG00000123643.8|solute carrier family 36 (proton/amino acid symporter), member 1 	ENST00000521925.1|SLC36A1|ENSG00000123643.8|solute carrier family 36 (proton/amino acid symporter), member 1
hg19_v2_chr3_+_141205852_141205929	0.0263078	AAAGUGC	ENST00000286364.3|RASA2|ENSG00000155903.7|RAS p21 protein activator 2 	ENST00000452898.1|RASA2|ENSG00000155903.7|RAS p21 protein activator 2
hg19_v2_chr7_-_142583506_142583510	0.0260947	AAAGUGC	ENST00000359396.3|TRPV6|ENSG00000165125.13|transient receptor potential cation channel, subfamily V, member 6
hg19_v2_chr7_-_111846435_111846471	0.025788	AAAGUGC	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr22_+_50609150_50609199	0.0257213	AAAGUGC	ENST00000159647.5|PANX2|ENSG00000073150.9|pannexin 2 	ENST00000395842.2|PANX2|ENSG00000073150.9|pannexin 2
hg19_v2_chr8_-_30891078_30891231	0.0255156	AAAGUGC	ENST00000339382.2|PURG|ENSG00000172733.10|purine-rich element binding protein G 	ENST00000475541.1|PURG|ENSG00000172733.10|purine-rich element binding protein G
hg19_v2_chr14_-_77843390_77843462	0.0252164	AAAGUGC	ENST00000216468.7|TMED8|ENSG00000100580.7|transmembrane emp24 protein transport domain containing 8
hg19_v2_chr2_-_85788605_85788632	0.0251981	AAAGUGC	ENST00000233838.4|GGCX|ENSG00000115486.7|gamma-glutamyl carboxylase
hg19_v2_chr4_+_88928777_88928822	0.0249708	AAAGUGC	ENST00000237596.2|PKD2|ENSG00000118762.3|polycystic kidney disease 2 (autosomal dominant)
hg19_v2_chr1_-_10003372_10003465	0.024947	AAAGUGC	ENST00000377223.1|LZIC|ENSG00000162441.7|leucine zipper and CTNNBIP1 domain containing 	ENST00000541052.1|LZIC|ENSG00000162441.7|leucine zipper and CTNNBIP1 domain containing 	ENST00000377213.1|LZIC|ENSG00000162441.7|leucine zipper and CTNNBIP1 domain containing
hg19_v2_chr9_-_107690420_107690518	0.0248281	AAAGUGC	ENST00000423487.2|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374733.1|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374736.3|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v2_chr12_-_65146636_65146651	0.0248272	AAAGUGC	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr3_+_149530469_149530557	0.0248072	AAAGUGC	ENST00000392894.3|RNF13|ENSG00000082996.15|ring finger protein 13 	ENST00000344229.3|RNF13|ENSG00000082996.15|ring finger protein 13
hg19_v2_chr5_-_114880533_114880591	0.0247334	AAAGUGC	ENST00000274457.3|FEM1C|ENSG00000145780.6|fem-1 homolog c (C. elegans)
hg19_v2_chr2_-_240322643_240322661	0.0245789	AAAGUGC	ENST00000345617.3|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chr10_+_120863587_120863631	0.0244894	AAAGUGC	ENST00000535029.1|FAM45A|ENSG00000119979.11|family with sequence similarity 45, member A 	ENST00000361432.2|FAM45A|ENSG00000119979.11|family with sequence similarity 45, member A 	ENST00000544016.1|FAM45A|ENSG00000119979.11|family with sequence similarity 45, member A
hg19_v2_chr3_-_46037299_46037337	0.0244332	AAAGUGC	ENST00000296137.2|FYCO1|ENSG00000163820.10|FYVE and coiled-coil domain containing 1
hg19_v2_chr8_-_74791051_74791145	0.0244063	AAAGUGC	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr3_-_150264272_150264428	0.0242926	AAAGUGC	ENST00000491660.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000487153.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000239944.2|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1
hg19_v2_chr5_+_140207536_140207650	0.0237221	AAAGUGC	ENST00000529310.1|PCDHA6|ENSG00000081842.13|protocadherin alpha 6 	ENST00000527624.1|PCDHA6|ENSG00000081842.13|protocadherin alpha 6
hg19_v2_chr3_-_57199397_57199432	0.02372	AAAGUGC	ENST00000296318.7|IL17RD|ENSG00000144730.12|interleukin 17 receptor D
hg19_v2_chr1_+_52682052_52682052	0.0236864	AAAGUGC	ENST00000371591.1|ZFYVE9|ENSG00000157077.10|zinc finger, FYVE domain containing 9
hg19_v2_chr15_+_92937058_92937133	0.0235167	AAAGUGC	ENST00000268164.3|ST8SIA2|ENSG00000140557.7|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
hg19_v2_chr5_+_72251793_72251825	0.0232764	AAAGUGC	ENST00000430046.2|FCHO2|ENSG00000157107.9|FCH domain only 2 	ENST00000341845.6|FCHO2|ENSG00000157107.9|FCH domain only 2
hg19_v2_chr1_+_118148556_118148681	0.0232274	AAAGUGC	ENST00000369448.3|FAM46C|ENSG00000183508.4|family with sequence similarity 46, member C
hg19_v2_chr2_-_219433014_219433100	0.0231725	AAAGUGC	ENST00000418019.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000454775.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000338465.5|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000415516.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000258399.3|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37
hg19_v2_chr10_+_86088381_86088436	0.0230598	AAAGUGC	ENST00000224756.8|CCSER2|ENSG00000107771.11|coiled-coil serine-rich protein 2 	ENST00000372088.2|CCSER2|ENSG00000107771.11|coiled-coil serine-rich protein 2
hg19_v2_chr2_+_10262442_10262479	0.022707	AAAGUGC	ENST00000360566.2|RRM2|ENSG00000171848.9|ribonucleotide reductase M2
hg19_v2_chr13_+_27131887_27131899	0.0223998	AAAGUGC	ENST00000335327.5|WASF3|ENSG00000132970.8|WAS protein family, member 3
hg19_v2_chr5_-_148930960_148931013	0.0221145	AAAGUGC	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr2_+_228029281_228029330	0.021915	AAAGUGC	ENST00000396578.3|COL4A3|ENSG00000169031.14|collagen, type IV, alpha 3 (Goodpasture antigen)
hg19_v2_chr12_+_69864129_69864222	0.0218674	AAAGUGC	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr2_+_209130965_209131031	0.0218528	AAAGUGC	ENST00000392202.3|PIKFYVE|ENSG00000115020.12|phosphoinositide kinase, FYVE finger containing 	ENST00000264380.4|PIKFYVE|ENSG00000115020.12|phosphoinositide kinase, FYVE finger containing 	ENST00000407449.1|PIKFYVE|ENSG00000115020.12|phosphoinositide kinase, FYVE finger containing 	ENST00000308862.6|PIKFYVE|ENSG00000115020.12|phosphoinositide kinase, FYVE finger containing
hg19_v2_chr12_-_28124903_28124957	0.0214574	AAAGUGC	ENST00000395872.1|PTHLH|ENSG00000087494.11|parathyroid hormone-like hormone 	ENST00000354417.3|PTHLH|ENSG00000087494.11|parathyroid hormone-like hormone 	ENST00000201015.4|PTHLH|ENSG00000087494.11|parathyroid hormone-like hormone
hg19_v2_chrX_+_106045891_106046043	0.021047	AAAGUGC	ENST00000357242.5|TBC1D8B|ENSG00000133138.15|TBC1 domain family, member 8B (with GRAM domain) 	ENST00000310452.2|TBC1D8B|ENSG00000133138.15|TBC1 domain family, member 8B (with GRAM domain) 	ENST00000481617.2|TBC1D8B|ENSG00000133138.15|TBC1 domain family, member 8B (with GRAM domain) 	ENST00000276175.3|TBC1D8B|ENSG00000133138.15|TBC1 domain family, member 8B (with GRAM domain)
hg19_v2_chr8_-_141645645_141645783	0.0209598	AAAGUGC	ENST00000519980.1|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2 	ENST00000220592.5|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2
hg19_v2_chr1_+_100503643_100503677	0.0209056	AAAGUGC	ENST00000370152.3|HIAT1|ENSG00000156875.9|hippocampus abundant transcript 1
hg19_v2_chr5_+_6448736_6448736	0.0208351	AAAGUGC	ENST00000399816.3|UBE2QL1|ENSG00000215218.3|ubiquitin-conjugating enzyme E2Q family-like 1
hg19_v2_chr17_-_77770830_77770915	0.0205227	AAAGUGC	ENST00000269385.4|CBX8|ENSG00000141570.6|chromobox homolog 8
hg19_v2_chr10_+_65281123_65281183	0.0203764	AAAGUGC	ENST00000298249.4|REEP3|ENSG00000165476.8|receptor accessory protein 3 	ENST00000373758.4|REEP3|ENSG00000165476.8|receptor accessory protein 3
hg19_v2_chr5_-_9546180_9546195	0.019742	AAAGUGC	ENST00000382496.5|SEMA5A|ENSG00000112902.7|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
hg19_v2_chr13_+_113622810_113622830	0.019378	AAAGUGC	ENST00000397030.1|MCF2L|ENSG00000126217.16|MCF.2 cell line derived transforming sequence-like
hg19_v2_chr8_+_56014949_56015048	0.0191495	AAAGUGC	ENST00000327381.6|XKR4|ENSG00000206579.7|XK, Kell blood group complex subunit-related family, member 4
hg19_v2_chr15_+_68570062_68570147	0.0188513	AAAGUGC	ENST00000306917.4|FEM1B|ENSG00000169018.5|fem-1 homolog b (C. elegans)
hg19_v2_chr5_-_150948414_150948505	0.0187563	AAAGUGC	ENST00000261800.5|FAT2|ENSG00000086570.8|FAT atypical cadherin 2
hg19_v2_chr6_+_16238786_16238854	0.0185887	AAAGUGC	ENST00000259727.4|GMPR|ENSG00000137198.5|guanosine monophosphate reductase
hg19_v2_chr1_+_36396677_36396749	0.0184213	AAAGUGC	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr20_-_42939782_42939858	0.0183906	AAAGUGC	ENST00000396825.3|FITM2|ENSG00000197296.5|fat storage-inducing transmembrane protein 2
hg19_v2_chr19_+_50094866_50094927	0.0181338	AAAGUGC	ENST00000418929.2|PRR12|ENSG00000126464.9|proline rich 12
hg19_v2_chr17_-_76870222_76870242	0.0179794	AAAGUGC	ENST00000585421.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr1_-_150552006_150552093	0.017829	AAAGUGC	ENST00000307940.3|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related) 	ENST00000369026.2|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related)
hg19_v2_chr3_+_25469724_25469773	0.0175192	AAAGUGC	ENST00000437042.2|RARB|ENSG00000077092.14|retinoic acid receptor, beta
hg19_v2_chr17_+_8924837_8924872	0.0173893	AAAGUGC	ENST00000173229.2|NTN1|ENSG00000065320.4|netrin 1
hg19_v2_chr12_-_9913489_9913506	0.0171117	AAAGUGC	ENST00000228434.3|CD69|ENSG00000110848.4|CD69 molecule 	ENST00000536709.1|CD69|ENSG00000110848.4|CD69 molecule
hg19_v2_chrX_+_150151752_150151762	0.017094	AAAGUGC	ENST00000325307.7|HMGB3|ENSG00000029993.10|high mobility group box 3
hg19_v2_chr5_+_10353780_10353890	0.0170674	AAAGUGC	ENST00000449913.2|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000503788.1|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000274140.5|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
hg19_v2_chr6_-_24721054_24721074	0.0170405	AAAGUGC	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr9_+_116638562_116638606	0.0170279	AAAGUGC	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr6_+_107811162_107811196	0.0168432	AAAGUGC	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chr5_+_140306478_140306478	0.016799	AAAGUGC	ENST00000253807.2|PCDHAC1|ENSG00000248383.3|protocadherin alpha subfamily C, 1
hg19_v2_chr22_+_40390930_40390994	0.0166839	AAAGUGC	ENST00000333407.6|FAM83F|ENSG00000133477.12|family with sequence similarity 83, member F
hg19_v2_chr8_-_127570603_127570648	0.0166246	AAAGUGC	ENST00000304916.3|FAM84B|ENSG00000168672.3|family with sequence similarity 84, member B
hg19_v2_chr11_-_17035943_17035990	0.0165908	AAAGUGC	ENST00000355661.3|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7 	ENST00000532079.1|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7 	ENST00000448080.2|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7 	ENST00000531066.1|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7
hg19_v2_chr6_+_42749759_42749780	0.0162884	AAAGUGC	ENST00000314073.5|GLTSCR1L|ENSG00000112624.8|GLTSCR1-like
hg19_v2_chr11_-_18656028_18656040	0.0162531	AAAGUGC	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr1_+_170632250_170632277	0.0160527	AAAGUGC	ENST00000367760.3|PRRX1|ENSG00000116132.7|paired related homeobox 1
hg19_v2_chr3_-_192445289_192445395	0.0158066	AAAGUGC	ENST00000430714.1|FGF12|ENSG00000114279.9|fibroblast growth factor 12 	ENST00000418610.1|FGF12|ENSG00000114279.9|fibroblast growth factor 12 	ENST00000448795.1|FGF12|ENSG00000114279.9|fibroblast growth factor 12 	ENST00000445105.2|FGF12|ENSG00000114279.9|fibroblast growth factor 12
hg19_v2_chr1_+_87380299_87380475	0.0157528	AAAGUGC	ENST00000370551.4|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1 	ENST00000370550.5|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1
hg19_v2_chr1_-_207224307_207224422	0.0154241	AAAGUGC	ENST00000315927.4|YOD1|ENSG00000180667.6|YOD1 deubiquitinase
hg19_v2_chr5_-_41510656_41510713	0.0153389	AAAGUGC	ENST00000377801.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chr19_+_1752372_1752372	0.015313	AAAGUGC	ENST00000382349.4|ONECUT3|ENSG00000205922.4|one cut homeobox 3
hg19_v2_chr7_-_121036337_121036429	0.0151792	AAAGUGC	ENST00000426156.1|FAM3C|ENSG00000196937.6|family with sequence similarity 3, member C 	ENST00000359943.3|FAM3C|ENSG00000196937.6|family with sequence similarity 3, member C 	ENST00000412653.1|FAM3C|ENSG00000196937.6|family with sequence similarity 3, member C
hg19_v2_chrX_+_17393543_17393543	0.0150709	AAAGUGC	ENST00000380060.3|NHS|ENSG00000188158.10|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg19_v2_chr13_+_47127293_47127321	0.0148764	AAAGUGC	ENST00000311191.6|LRCH1|ENSG00000136141.10|leucine-rich repeats and calponin homology (CH) domain containing 1
hg19_v2_chr12_-_120315074_120315097	0.014621	AAAGUGC	ENST00000261833.7|CIT|ENSG00000122966.9|citron (rho-interacting, serine/threonine kinase 21) 	ENST00000392521.2|CIT|ENSG00000122966.9|citron (rho-interacting, serine/threonine kinase 21)
hg19_v2_chr16_-_20911641_20911720	0.0145313	AAAGUGC	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr17_-_66287257_66287276	0.0143303	AAAGUGC	ENST00000327268.4|SLC16A6|ENSG00000108932.7|solute carrier family 16, member 6
hg19_v2_chr10_+_89622870_89622870	0.0140727	AAAGUGC	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr11_+_92085262_92085262	0.0140155	AAAGUGC	ENST00000298047.6|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000409404.2|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000541502.1|FAT3|ENSG00000165323.11|FAT atypical cadherin 3
hg19_v2_chr3_+_14989076_14989113	0.0139549	AAAGUGC	ENST00000413118.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2 	ENST00000425241.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2
hg19_v2_chr12_+_862089_862343	0.0138829	AAAGUGC	ENST00000315939.6|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000537687.1|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000447667.2|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1
hg19_v2_chr22_+_38093005_38093067	0.0138595	AAAGUGC	ENST00000406386.3|TRIOBP|ENSG00000100106.15|TRIO and F-actin binding protein
hg19_v2_chr11_-_70507901_70507958	0.0138539	AAAGUGC	ENST00000449833.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000357171.3|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000449116.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2
hg19_v2_chr5_+_162932554_162932661	0.013747	AAAGUGC	ENST00000321757.6|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta 	ENST00000421814.2|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta 	ENST00000518095.1|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta
hg19_v2_chr6_+_117002339_117002400	0.0137411	AAAGUGC	ENST00000413340.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000368564.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000356348.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6)
hg19_v2_chrX_-_70288234_70288291	0.0137155	AAAGUGC	ENST00000276105.3|SNX12|ENSG00000147164.7|sorting nexin 12 	ENST00000374274.3|SNX12|ENSG00000147164.7|sorting nexin 12
hg19_v2_chr8_+_37553261_37553282	0.0136449	AAAGUGC	ENST00000331569.4|ZNF703|ENSG00000183779.5|zinc finger protein 703
hg19_v2_chr1_+_75594119_75594119	0.0136182	AAAGUGC	ENST00000294638.5|LHX8|ENSG00000162624.10|LIM homeobox 8
hg19_v2_chr17_+_42264395_42264418	0.0136003	AAAGUGC	ENST00000587989.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000590235.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2
hg19_v2_chrX_+_24483338_24483573	0.0133815	AAAGUGC	ENST00000379162.4|PDK3|ENSG00000067992.8|pyruvate dehydrogenase kinase, isozyme 3 	ENST00000441463.2|PDK3|ENSG00000067992.8|pyruvate dehydrogenase kinase, isozyme 3
hg19_v2_chr19_+_47421933_47421933	0.013174	AAAGUGC	ENST00000404338.3|ARHGAP35|ENSG00000160007.13|Rho GTPase activating protein 35
hg19_v2_chr13_-_26795840_26795995	0.0131344	AAAGUGC	ENST00000381570.3|RNF6|ENSG00000127870.12|ring finger protein (C3H2C3 type) 6 	ENST00000399762.2|RNF6|ENSG00000127870.12|ring finger protein (C3H2C3 type) 6 	ENST00000346166.3|RNF6|ENSG00000127870.12|ring finger protein (C3H2C3 type) 6
hg19_v2_chr9_-_13279589_13279629	0.0130152	AAAGUGC	ENST00000319217.7|MPDZ|ENSG00000107186.12|multiple PDZ domain protein
hg19_v2_chr18_-_64271363_64271390	0.0127862	AAAGUGC	ENST00000262150.2|CDH19|ENSG00000071991.4|cadherin 19, type 2
hg19_v2_chr6_+_134210243_134210276	0.0127452	AAAGUGC	ENST00000367882.4|TCF21|ENSG00000118526.6|transcription factor 21
hg19_v2_chr14_-_51297837_51297887	0.0126696	AAAGUGC	ENST00000245441.5|NIN|ENSG00000100503.19|ninein (GSK3B interacting protein) 	ENST00000389868.3|NIN|ENSG00000100503.19|ninein (GSK3B interacting protein) 	ENST00000382041.3|NIN|ENSG00000100503.19|ninein (GSK3B interacting protein) 	ENST00000324330.9|NIN|ENSG00000100503.19|ninein (GSK3B interacting protein) 	ENST00000453196.1|NIN|ENSG00000100503.19|ninein (GSK3B interacting protein) 	ENST00000453401.2|NIN|ENSG00000100503.19|ninein (GSK3B interacting protein)
hg19_v2_chr1_+_33005020_33005077	0.0126148	AAAGUGC	ENST00000373510.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A 	ENST00000316459.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A
hg19_v2_chr5_+_140201183_140201361	0.0125506	AAAGUGC	ENST00000529619.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000529859.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000378126.3|PCDHA5|ENSG00000204965.4|protocadherin alpha 5
hg19_v2_chr6_-_167040731_167040745	0.0125383	AAAGUGC	ENST00000265678.4|RPS6KA2|ENSG00000071242.7|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v2_chr18_-_30050395_30050495	0.0124331	AAAGUGC	ENST00000269209.6|GAREM|ENSG00000141441.11|GRB2 associated, regulator of MAPK1 	ENST00000399218.4|GAREM|ENSG00000141441.11|GRB2 associated, regulator of MAPK1
hg19_v2_chr3_+_122513642_122513664	0.0121354	AAAGUGC	ENST00000261038.5|DIRC2|ENSG00000138463.8|disrupted in renal carcinoma 2
hg19_v2_chr1_-_160232197_160232284	0.011858	AAAGUGC	ENST00000419626.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000610139.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000475733.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000407642.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000368073.3|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000326837.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr1_+_145438469_145438501	0.0118362	AAAGUGC	ENST00000369317.4|TXNIP|ENSG00000117289.7|thioredoxin interacting protein
hg19_v2_chr16_+_577697_577856	0.0116338	AAAGUGC	ENST00000562370.1|CAPN15|ENSG00000103326.6|calpain 15 	ENST00000568988.1|CAPN15|ENSG00000103326.6|calpain 15 	ENST00000219611.2|CAPN15|ENSG00000103326.6|calpain 15
hg19_v2_chr11_-_18610214_18610239	0.0114524	AAAGUGC	ENST00000300038.7|UEVLD|ENSG00000151116.12|UEV and lactate/malate dehyrogenase domains 	ENST00000396197.3|UEVLD|ENSG00000151116.12|UEV and lactate/malate dehyrogenase domains 	ENST00000320750.6|UEVLD|ENSG00000151116.12|UEV and lactate/malate dehyrogenase domains
hg19_v2_chr13_+_115047053_115047095	0.0114473	AAAGUGC	ENST00000375299.3|UPF3A|ENSG00000169062.10|UPF3 regulator of nonsense transcripts homolog A (yeast)
hg19_v2_chr5_+_140174429_140174550	0.01121	AAAGUGC	ENST00000520672.2|PCDHA2|ENSG00000204969.5|protocadherin alpha 2 	ENST00000378132.1|PCDHA2|ENSG00000204969.5|protocadherin alpha 2 	ENST00000526136.1|PCDHA2|ENSG00000204969.5|protocadherin alpha 2
hg19_v2_chr17_-_57184064_57184083	0.0111471	AAAGUGC	ENST00000262294.7|TRIM37|ENSG00000108395.9|tripartite motif containing 37
hg19_v2_chr11_-_18343669_18343721	0.0109275	AAAGUGC	ENST00000396253.3|HPS5|ENSG00000110756.13|Hermansky-Pudlak syndrome 5 	ENST00000349215.3|HPS5|ENSG00000110756.13|Hermansky-Pudlak syndrome 5 	ENST00000438420.2|HPS5|ENSG00000110756.13|Hermansky-Pudlak syndrome 5
hg19_v2_chr6_+_33378738_33378838	0.0108831	AAAGUGC	ENST00000374512.3|PHF1|ENSG00000112511.13|PHD finger protein 1 	ENST00000374516.3|PHF1|ENSG00000112511.13|PHD finger protein 1
hg19_v2_chr21_+_47878757_47879024	0.0108271	AAAGUGC	ENST00000400274.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000427143.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000318711.7|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000457905.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000466639.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000435722.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000417564.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila)
hg19_v2_chr4_+_79697495_79697538	0.010815	AAAGUGC	ENST00000502871.1|BMP2K|ENSG00000138756.13|BMP2 inducible kinase 	ENST00000335016.5|BMP2K|ENSG00000138756.13|BMP2 inducible kinase
hg19_v2_chr15_+_89164520_89164559	0.0104901	AAAGUGC	ENST00000332810.3|AEN|ENSG00000181026.13|apoptosis enhancing nuclease
hg19_v2_chr1_+_160085501_160085563	0.0103808	AAAGUGC	ENST00000361216.3|ATP1A2|ENSG00000018625.10|ATPase, Na+/K+ transporting, alpha 2 polypeptide
hg19_v2_chr12_-_92539614_92539673	0.0103304	AAAGUGC	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chr10_-_60027642_60027705	0.0101706	AAAGUGC	ENST00000373935.3|IPMK|ENSG00000151151.5|inositol polyphosphate multikinase
hg19_v2_chr7_+_100136811_100136882	0.0097705	AAAGUGC	ENST00000300176.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2 	ENST00000262935.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2
hg19_v2_chr20_+_60718785_60718853	0.00974432	AAAGUGC	ENST00000421564.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000450482.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000331758.3|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1
hg19_v2_chr20_-_47444420_47444526	0.00970599	AAAGUGC	ENST00000371941.3|PREX1|ENSG00000124126.9|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 	ENST00000396220.1|PREX1|ENSG00000124126.9|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
hg19_v2_chr3_-_160283348_160283376	0.00961444	AAAGUGC	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr3_+_68053359_68053419	0.00954094	AAAGUGC	ENST00000478136.1|FAM19A1|ENSG00000183662.6|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1
hg19_v2_chr11_-_1330834_1330884	0.00929654	AAAGUGC	ENST00000525159.1|TOLLIP|ENSG00000078902.11|toll interacting protein 	ENST00000317204.6|TOLLIP|ENSG00000078902.11|toll interacting protein 	ENST00000542915.1|TOLLIP|ENSG00000078902.11|toll interacting protein 	ENST00000527938.1|TOLLIP|ENSG00000078902.11|toll interacting protein 	ENST00000530541.1|TOLLIP|ENSG00000078902.11|toll interacting protein 	ENST00000263646.7|TOLLIP|ENSG00000078902.11|toll interacting protein
hg19_v2_chr9_-_111929560_111929571	0.00918741	AAAGUGC	ENST00000561981.2|FRRS1L|ENSG00000260230.2|ferric-chelate reductase 1-like
hg19_v2_chr12_-_10766184_10766222	0.00911591	AAAGUGC	ENST00000539554.1|MAGOHB|ENSG00000111196.5|mago-nashi homolog B (Drosophila) 	ENST00000381881.2|MAGOHB|ENSG00000111196.5|mago-nashi homolog B (Drosophila) 	ENST00000320756.2|MAGOHB|ENSG00000111196.5|mago-nashi homolog B (Drosophila)
hg19_v2_chr7_-_100287071_100287071	0.00906025	AAAGUGC	ENST00000275732.5|GIGYF1|ENSG00000146830.9|GRB10 interacting GYF protein 1
hg19_v2_chr4_-_88141755_88141791	0.00904061	AAAGUGC	ENST00000273963.5|KLHL8|ENSG00000145332.9|kelch-like family member 8
hg19_v2_chr10_+_1095416_1095482	0.00898423	AAAGUGC	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr1_-_205180664_205180727	0.00870229	AAAGUGC	ENST00000367161.3|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase 	ENST00000367162.3|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase 	ENST00000367160.4|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase
hg19_v2_chr10_+_104404218_104404253	0.00870148	AAAGUGC	ENST00000302424.7|TRIM8|ENSG00000171206.9|tripartite motif containing 8
hg19_v2_chr2_+_220042933_220042985	0.00853715	AAAGUGC	ENST00000430297.2|FAM134A|ENSG00000144567.6|family with sequence similarity 134, member A
hg19_v2_chrX_-_10645773_10645795	0.00845159	AAAGUGC	ENST00000453318.2|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome)
hg19_v2_chr16_+_84682108_84682218	0.0083905	AAAGUGC	ENST00000564996.1|KLHL36|ENSG00000135686.8|kelch-like family member 36 	ENST00000258157.5|KLHL36|ENSG00000135686.8|kelch-like family member 36 	ENST00000567410.1|KLHL36|ENSG00000135686.8|kelch-like family member 36
hg19_v2_chr15_-_64648273_64648442	0.00834331	AAAGUGC	ENST00000607537.1|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303052.7|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303032.6|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1
hg19_v2_chr17_-_53800217_53800231	0.00827761	AAAGUGC	ENST00000424486.2|TMEM100|ENSG00000166292.7|transmembrane protein 100
hg19_v2_chr17_-_17399701_17399716	0.00815087	AAAGUGC	ENST00000225688.3|RASD1|ENSG00000108551.4|RAS, dexamethasone-induced 1 	ENST00000579152.1|RASD1|ENSG00000108551.4|RAS, dexamethasone-induced 1
hg19_v2_chr11_+_76494253_76494317	0.00803517	AAAGUGC	ENST00000333090.4|TSKU|ENSG00000182704.6|tsukushi, small leucine rich proteoglycan
hg19_v2_chr14_-_23504087_23504118	0.0080331	AAAGUGC	ENST00000493471.2|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5 	ENST00000460922.2|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5
hg19_v2_chr5_-_56247935_56247959	0.00797301	AAAGUGC	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr6_-_137113604_137113666	0.00790795	AAAGUGC	ENST00000359015.4|MAP3K5|ENSG00000197442.8|mitogen-activated protein kinase kinase kinase 5
hg19_v2_chr2_+_201676256_201676323	0.00766608	AAAGUGC	ENST00000452206.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000410110.2|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000409600.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1
hg19_v2_chr12_-_50297638_50297691	0.00762359	AAAGUGC	ENST00000320634.3|FAIM2|ENSG00000135472.4|Fas apoptotic inhibitory molecule 2
hg19_v2_chr6_+_110501344_110501412	0.0075939	AAAGUGC	ENST00000368932.1|CDC40|ENSG00000168438.10|cell division cycle 40
hg19_v2_chrX_-_24045303_24045303	0.00744777	AAAGUGC	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr12_-_101801505_101801598	0.00739521	AAAGUGC	ENST00000539055.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000551688.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000551671.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000261636.8|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1
hg19_v2_chr5_-_171433819_171433911	0.00730048	AAAGUGC	ENST00000296933.6|FBXW11|ENSG00000072803.13|F-box and WD repeat domain containing 11
hg19_v2_chr3_+_15247686_15247784	0.00725277	AAAGUGC	ENST00000253693.2|CAPN7|ENSG00000131375.5|calpain 7
hg19_v2_chr15_-_75165651_75165714	0.0072426	AAAGUGC	ENST00000562363.1|SCAMP2|ENSG00000140497.12|secretory carrier membrane protein 2 	ENST00000564529.1|SCAMP2|ENSG00000140497.12|secretory carrier membrane protein 2 	ENST00000268099.9|SCAMP2|ENSG00000140497.12|secretory carrier membrane protein 2
hg19_v2_chr3_-_172428959_172429013	0.00720295	AAAGUGC	ENST00000475381.1|NCEH1|ENSG00000144959.5|neutral cholesterol ester hydrolase 1 	ENST00000538775.1|NCEH1|ENSG00000144959.5|neutral cholesterol ester hydrolase 1 	ENST00000273512.3|NCEH1|ENSG00000144959.5|neutral cholesterol ester hydrolase 1 	ENST00000543711.1|NCEH1|ENSG00000144959.5|neutral cholesterol ester hydrolase 1
hg19_v2_chr1_-_85156216_85156240	0.00710208	AAAGUGC	ENST00000342203.3|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein 	ENST00000370612.4|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein
hg19_v2_chr3_+_58291965_58292038	0.00704521	AAAGUGC	ENST00000445193.3|RPP14|ENSG00000163684.7|ribonuclease P/MRP 14kDa subunit 	ENST00000295959.5|RPP14|ENSG00000163684.7|ribonuclease P/MRP 14kDa subunit 	ENST00000466547.1|RPP14|ENSG00000163684.7|ribonuclease P/MRP 14kDa subunit
hg19_v2_chr5_+_149109825_149109907	0.00680276	AAAGUGC	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chrX_-_128977781_128977869	0.00668929	AAAGUGC	ENST00000357166.6|ZDHHC9|ENSG00000188706.8|zinc finger, DHHC-type containing 9
hg19_v2_chr4_-_99851766_99851788	0.00654623	AAAGUGC	ENST00000450253.2|EIF4E|ENSG00000151247.8|eukaryotic translation initiation factor 4E
hg19_v2_chr12_+_65004292_65004306	0.00642071	AAAGUGC	ENST00000542104.1|RASSF3|ENSG00000153179.7|Ras association (RalGDS/AF-6) domain family member 3 	ENST00000336061.2|RASSF3|ENSG00000153179.7|Ras association (RalGDS/AF-6) domain family member 3
hg19_v2_chr11_+_64126614_64126665	0.00641273	AAAGUGC	ENST00000528057.1|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000334205.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000294261.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4
hg19_v2_chr12_+_72148614_72148699	0.00632646	AAAGUGC	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr22_-_39640756_39640756	0.00623791	AAAGUGC	ENST00000331163.6|PDGFB|ENSG00000100311.12|platelet-derived growth factor beta polypeptide
hg19_v2_chr17_+_36861735_36861795	0.00622167	AAAGUGC	ENST00000378137.5|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 	ENST00000325718.7|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v2_chr1_+_203274639_203274664	0.00614415	AAAGUGC	ENST00000290551.4|BTG2|ENSG00000159388.5|BTG family, member 2
hg19_v2_chr11_+_67171358_67171386	0.00610201	AAAGUGC	ENST00000526387.1|TBC1D10C|ENSG00000175463.7|TBC1 domain family, member 10C
hg19_v2_chr20_+_33292068_33292164	0.00592745	AAAGUGC	ENST00000374810.3|TP53INP2|ENSG00000078804.8|tumor protein p53 inducible nuclear protein 2 	ENST00000374809.2|TP53INP2|ENSG00000078804.8|tumor protein p53 inducible nuclear protein 2 	ENST00000451665.1|TP53INP2|ENSG00000078804.8|tumor protein p53 inducible nuclear protein 2
hg19_v2_chr3_-_184870751_184870872	0.00573392	AAAGUGC	ENST00000335012.2|C3orf70|ENSG00000187068.2|chromosome 3 open reading frame 70
hg19_v2_chr1_-_44497024_44497068	0.00566408	AAAGUGC	ENST00000372306.3|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9 	ENST00000372310.3|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9 	ENST00000475075.2|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg19_v2_chr4_+_6784401_6784510	0.00549054	AAAGUGC	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr4_+_126237554_126237554	0.00544885	AAAGUGC	ENST00000394329.3|FAT4|ENSG00000196159.7|FAT atypical cadherin 4
hg19_v2_chr9_-_127952032_127952098	0.0052994	AAAGUGC	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr1_+_202091980_202091991	0.00520109	AAAGUGC	ENST00000367282.5|GPR37L1|ENSG00000170075.8|G protein-coupled receptor 37 like 1
hg19_v2_chr8_+_64081118_64081131	0.00509622	AAAGUGC	ENST00000539294.1|YTHDF3|ENSG00000185728.12|YTH domain family, member 3
hg19_v2_chr18_-_33709268_33709380	0.00505497	AAAGUGC	ENST00000269187.5|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6 	ENST00000590986.1|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6 	ENST00000440549.2|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6
hg19_v2_chr4_-_83719983_83720085	0.00475774	AAAGUGC	ENST00000319540.4|SCD5|ENSG00000145284.7|stearoyl-CoA desaturase 5
hg19_v2_chr3_-_138665969_138665993	0.00472603	AAAGUGC	ENST00000330315.3|FOXL2|ENSG00000183770.5|forkhead box L2
hg19_v2_chr3_-_179754706_179754732	0.00459356	AAAGUGC	ENST00000465751.1|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like 	ENST00000467460.1|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like
hg19_v2_chr3_-_197476560_197476577	0.00454846	AAAGUGC	ENST00000273582.5|KIAA0226|ENSG00000145016.9|KIAA0226
hg19_v2_chr7_-_105517021_105517050	0.00450112	AAAGUGC	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr12_+_48166978_48167047	0.00444425	AAAGUGC	ENST00000442218.2|SLC48A1|ENSG00000211584.9|solute carrier family 48 (heme transporter), member 1
hg19_v2_chr5_+_140165876_140165876	0.00443183	AAAGUGC	ENST00000504120.2|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000394633.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000378133.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1
hg19_v2_chr10_+_114206956_114207040	0.00434952	AAAGUGC	ENST00000432306.1|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A 	ENST00000393077.2|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A
hg19_v2_chr3_+_150126101_150126122	0.00406989	AAAGUGC	ENST00000361875.3|TSC22D2|ENSG00000196428.8|TSC22 domain family, member 2 	ENST00000361136.2|TSC22D2|ENSG00000196428.8|TSC22 domain family, member 2
hg19_v2_chr15_+_85923856_85923987	0.00406113	AAAGUGC	ENST00000560302.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000394518.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000361243.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000560256.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr4_+_6271558_6271594	0.00395003	AAAGUGC	ENST00000503569.1|WFS1|ENSG00000109501.9|Wolfram syndrome 1 (wolframin) 	ENST00000226760.1|WFS1|ENSG00000109501.9|Wolfram syndrome 1 (wolframin)
hg19_v2_chr1_-_9189229_9189259	0.00394921	AAAGUGC	ENST00000377411.4|GPR157|ENSG00000180758.10|G protein-coupled receptor 157
hg19_v2_chr8_+_38854418_38854514	0.00394428	AAAGUGC	ENST00000481513.1|ADAM9|ENSG00000168615.7|ADAM metallopeptidase domain 9 	ENST00000487273.2|ADAM9|ENSG00000168615.7|ADAM metallopeptidase domain 9
hg19_v2_chr7_+_30067973_30068063	0.0039212	AAAGUGC	ENST00000258679.7|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 	ENST00000449726.1|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 	ENST00000396257.2|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 	ENST00000396259.1|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
hg19_v2_chr10_-_735553_735683	0.00391349	AAAGUGC	ENST00000280886.6|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila) 	ENST00000423550.1|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v2_chr14_-_68066975_68067027	0.00373804	AAAGUGC	ENST00000559581.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000560722.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000559415.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000216452.4|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H
hg19_v2_chr1_+_180199393_180199426	0.00369403	AAAGUGC	ENST00000263726.2|LHX4|ENSG00000121454.4|LIM homeobox 4
hg19_v2_chr14_+_69865401_69865426	0.0036031	AAAGUGC	ENST00000556605.1|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000336643.5|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000031146.4|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9
hg19_v2_chr2_+_85360499_85360598	0.00355546	AAAGUGC	ENST00000282111.3|TCF7L1|ENSG00000152284.4|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg19_v2_chr1_+_10271674_10271674	0.00354864	AAAGUGC	ENST00000377086.1|KIF1B|ENSG00000054523.12|kinesin family member 1B
hg19_v2_chr2_-_96931679_96931756	0.00317218	AAAGUGC	ENST00000258439.3|TMEM127|ENSG00000135956.4|transmembrane protein 127 	ENST00000432959.1|TMEM127|ENSG00000135956.4|transmembrane protein 127
hg19_v2_chr11_-_86666427_86666450	0.00301844	AAAGUGC	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chrX_+_23352133_23352229	0.0029806	AAAGUGC	ENST00000379361.4|PTCHD1|ENSG00000165186.9|patched domain containing 1
hg19_v2_chr9_+_96793076_96793128	0.00294472	AAAGUGC	ENST00000375360.3|PTPDC1|ENSG00000158079.10|protein tyrosine phosphatase domain containing 1
hg19_v2_chr15_+_38544476_38544574	0.00284642	AAAGUGC	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr13_-_29069232_29069272	0.00283792	AAAGUGC	ENST00000282397.4|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1 	ENST00000541932.1|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1 	ENST00000539099.1|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1
hg19_v2_chr5_-_137548997_137549035	0.00261126	AAAGUGC	ENST00000505120.1|CDC23|ENSG00000094880.6|cell division cycle 23 	ENST00000394886.2|CDC23|ENSG00000094880.6|cell division cycle 23 	ENST00000394884.3|CDC23|ENSG00000094880.6|cell division cycle 23
hg19_v2_chr1_-_244013384_244013430	0.00253919	AAAGUGC	ENST00000366539.1|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr7_+_157129660_157129725	0.00247148	AAAGUGC	ENST00000429029.2|DNAJB6|ENSG00000105993.10|DnaJ (Hsp40) homolog, subfamily B, member 6 	ENST00000262177.4|DNAJB6|ENSG00000105993.10|DnaJ (Hsp40) homolog, subfamily B, member 6 	ENST00000417758.1|DNAJB6|ENSG00000105993.10|DnaJ (Hsp40) homolog, subfamily B, member 6 	ENST00000452797.2|DNAJB6|ENSG00000105993.10|DnaJ (Hsp40) homolog, subfamily B, member 6 	ENST00000443280.1|DNAJB6|ENSG00000105993.10|DnaJ (Hsp40) homolog, subfamily B, member 6
hg19_v2_chr8_-_116681221_116681236	0.00245338	AAAGUGC	ENST00000395715.3|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chrX_-_24690771_24690794	0.00234555	AAAGUGC	ENST00000379145.1|PCYT1B|ENSG00000102230.9|phosphate cytidylyltransferase 1, choline, beta
hg19_v2_chr7_-_105029329_105029376	0.00230818	AAAGUGC	ENST00000393651.3|SRPK2|ENSG00000135250.12|SRSF protein kinase 2 	ENST00000460391.1|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr11_+_14665263_14665274	0.00225762	AAAGUGC	ENST00000282096.4|PDE3B|ENSG00000152270.4|phosphodiesterase 3B, cGMP-inhibited
hg19_v2_chr2_+_220462560_220462604	0.00213743	AAAGUGC	ENST00000456909.1|STK11IP|ENSG00000144589.16|serine/threonine kinase 11 interacting protein 	ENST00000295641.10|STK11IP|ENSG00000144589.16|serine/threonine kinase 11 interacting protein
hg19_v2_chr1_+_109792641_109792641	0.00209682	AAAGUGC	ENST00000271332.3|CELSR2|ENSG00000143126.7|cadherin, EGF LAG seven-pass G-type receptor 2
hg19_v2_chr6_+_35310312_35310359	0.00206479	AAAGUGC	ENST00000448077.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000360694.3|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000418635.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000444397.1|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta
hg19_v2_chr15_+_67813406_67813492	0.00190701	AAAGUGC	ENST00000342683.4|C15orf61|ENSG00000189227.4|chromosome 15 open reading frame 61
hg19_v2_chr10_-_27149792_27149850	0.00185661	AAAGUGC	ENST00000376140.3|ABI1|ENSG00000136754.12|abl-interactor 1 	ENST00000376170.4|ABI1|ENSG00000136754.12|abl-interactor 1
hg19_v2_chr4_-_39979576_39979588	0.00184133	AAAGUGC	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chr12_+_52345448_52345532	0.00181937	AAAGUGC	ENST00000257963.4|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000541224.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000426655.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000536420.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000415850.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB
hg19_v2_chr11_-_65381643_65381767	0.00162686	AAAGUGC	ENST00000309100.3|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11 	ENST00000529839.1|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11 	ENST00000526293.1|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11
hg19_v2_chr1_-_235491462_235491534	0.00146954	AAAGUGC	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr17_+_36508111_36508128	0.00139194	AAAGUGC	ENST00000331159.5|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7 	ENST00000577233.1|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7
hg19_v2_chr2_-_72375167_72375254	0.00138862	AAAGUGC	ENST00000001146.2|CYP26B1|ENSG00000003137.4|cytochrome P450, family 26, subfamily B, polypeptide 1
hg19_v2_chr2_-_152684977_152685021	0.00138809	AAAGUGC	ENST00000428992.2|ARL5A|ENSG00000162980.12|ADP-ribosylation factor-like 5A 	ENST00000295087.8|ARL5A|ENSG00000162980.12|ADP-ribosylation factor-like 5A
hg19_v2_chr20_+_30865429_30865480	0.00106279	AAAGUGC	ENST00000375712.3|KIF3B|ENSG00000101350.6|kinesin family member 3B
hg19_v2_chr21_+_44394620_44394737	0.00104746	AAAGUGC	ENST00000291547.5|PKNOX1|ENSG00000160199.10|PBX/knotted 1 homeobox 1
hg19_v2_chr5_-_141704566_141704605	0.000887299	AAAGUGC	ENST00000344120.4|SPRY4|ENSG00000187678.8|sprouty homolog 4 (Drosophila) 	ENST00000434127.2|SPRY4|ENSG00000187678.8|sprouty homolog 4 (Drosophila)
hg19_v2_chr19_+_33166313_33166313	0.000809609	AAAGUGC	ENST00000334176.3|RGS9BP|ENSG00000186326.3|regulator of G protein signaling 9 binding protein
hg19_v2_chr6_+_163835669_163835693	0.000713944	AAAGUGC	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr10_+_70883908_70884003	0.000585124	AAAGUGC	ENST00000263559.6|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe) 	ENST00000395098.1|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe) 	ENST00000546041.1|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe) 	ENST00000541711.1|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe)
hg19_v2_chr9_-_124989804_124989865	0.000468571	AAAGUGC	ENST00000373755.2|LHX6|ENSG00000106852.11|LIM homeobox 6 	ENST00000373754.2|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr10_+_104005272_104005302	0.000421037	AAAGUGC	ENST00000369983.3|GBF1|ENSG00000107862.4|golgi brefeldin A resistant guanine nucleotide exchange factor 1
hg19_v2_chr1_+_12040238_12040429	0.000313717	AAAGUGC	ENST00000444836.1|MFN2|ENSG00000116688.12|mitofusin 2 	ENST00000235329.5|MFN2|ENSG00000116688.12|mitofusin 2
hg19_v2_chr17_-_13505219_13505299	0.000253227	AAAGUGC	ENST00000284110.1|HS3ST3A1|ENSG00000153976.2|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1
hg19_v2_chr7_-_102789629_102789685	0.000247335	AAAGUGC	ENST00000417955.1|NAPEPLD|ENSG00000161048.7|N-acyl phosphatidylethanolamine phospholipase D 	ENST00000341533.4|NAPEPLD|ENSG00000161048.7|N-acyl phosphatidylethanolamine phospholipase D 	ENST00000425379.1|NAPEPLD|ENSG00000161048.7|N-acyl phosphatidylethanolamine phospholipase D
