hg19_v2_chr6_-_26027480_26027522	0.71315	ZIC2_GLI1	ENST00000377364.3|HIST1H4B|ENSG00000124529.3|histone cluster 1, H4b
hg19_v2_chr22_-_50970566_50970644	0.582018	ZIC2_GLI1	ENST00000405135.1|ODF3B|ENSG00000177989.9|outer dense fiber of sperm tails 3B 	ENST00000401779.1|ODF3B|ENSG00000177989.9|outer dense fiber of sperm tails 3B
hg19_v2_chr6_-_32821599_32821755	0.559268	ZIC2_GLI1	ENST00000354258.4|TAP1|ENSG00000168394.9|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
hg19_v2_chr22_-_50970506_50970561	0.511063	ZIC2_GLI1	ENST00000428989.2|ODF3B|ENSG00000177989.9|outer dense fiber of sperm tails 3B 	ENST00000403326.1|ODF3B|ENSG00000177989.9|outer dense fiber of sperm tails 3B
hg19_v2_chr19_-_55881741_55881837	0.474087	ZIC2_GLI1	ENST00000264563.2|IL11|ENSG00000095752.2|interleukin 11 	ENST00000590625.1|IL11|ENSG00000095752.2|interleukin 11 	ENST00000585513.1|IL11|ENSG00000095752.2|interleukin 11
hg19_v2_chr5_-_168727786_168727838	0.466409	ZIC2_GLI1	ENST00000332966.8|SLIT3|ENSG00000184347.10|slit homolog 3 (Drosophila)
hg19_v2_chr22_-_50970919_50971009	0.428371	ZIC2_GLI1	ENST00000329363.4|ODF3B|ENSG00000177989.9|outer dense fiber of sperm tails 3B 	ENST00000437588.1|ODF3B|ENSG00000177989.9|outer dense fiber of sperm tails 3B
hg19_v2_chr17_-_15496722_15496722	0.385487	ZIC2_GLI1	ENST00000472534.1|CDRT1|ENSG00000241322.4|CMT1A duplicated region transcript 1
hg19_v2_chr2_+_149402553_149402568	0.355015	ZIC2_GLI1	ENST00000258484.6|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila) 	ENST00000409654.1|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila)
hg19_v2_chr14_+_101292445_101292485	0.349649	ZIC2_GLI1	ENST00000429159.2|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000520714.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000522771.2|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000424076.3|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000423456.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000521404.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000556736.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000451743.2|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000398518.2|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000554639.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000452120.2|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000519709.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding) 	ENST00000412736.2|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding)
hg19_v2_chr19_+_676385_676403	0.312247	ZIC2_GLI1	ENST00000166139.4|FSTL3|ENSG00000070404.5|follistatin-like 3 (secreted glycoprotein)
hg19_v2_chr17_+_40834580_40834633	0.303311	ZIC2_GLI1	ENST00000264638.4|CNTNAP1|ENSG00000108797.7|contactin associated protein 1
hg19_v2_chr14_-_24584138_24584223	0.299556	ZIC2_GLI1	ENST00000558280.1|NRL|ENSG00000129535.8|neural retina leucine zipper 	ENST00000561028.1|NRL|ENSG00000129535.8|neural retina leucine zipper
hg19_v2_chr22_-_46373004_46373016	0.288902	ZIC2_GLI1	ENST00000339464.4|WNT7B|ENSG00000188064.5|wingless-type MMTV integration site family, member 7B
hg19_v2_chr1_+_183155373_183155423	0.286014	ZIC2_GLI1	ENST00000493293.1|LAMC2|ENSG00000058085.10|laminin, gamma 2 	ENST00000264144.4|LAMC2|ENSG00000058085.10|laminin, gamma 2
hg19_v2_chr17_-_34122596_34122711	0.268857	ZIC2_GLI1	ENST00000250144.8|MMP28|ENSG00000129270.11|matrix metallopeptidase 28
hg19_v2_chr5_-_141704566_141704605	0.266569	ZIC2_GLI1	ENST00000344120.4|SPRY4|ENSG00000187678.8|sprouty homolog 4 (Drosophila) 	ENST00000434127.2|SPRY4|ENSG00000187678.8|sprouty homolog 4 (Drosophila)
hg19_v2_chr7_+_114562616_114562624	0.263963	ZIC2_GLI1	ENST00000448022.1|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing
hg19_v2_chr7_-_106301405_106301484	0.248632	ZIC2_GLI1	ENST00000523505.1|CCDC71L|ENSG00000253276.1|coiled-coil domain containing 71-like
hg19_v2_chrX_+_51928002_51928017	0.244947	ZIC2_GLI1	ENST00000375626.3|MAGED4|ENSG00000154545.12|melanoma antigen family D, 4
hg19_v2_chr14_-_61124977_61125037	0.234903	ZIC2_GLI1	ENST00000554986.1|SIX1|ENSG00000126778.7|SIX homeobox 1
hg19_v2_chr8_+_94752349_94752349	0.225512	ZIC2_GLI1	ENST00000391680.1|RBM12B-AS1|ENSG00000212998.1|RBM12B antisense RNA 1
hg19_v2_chr5_-_150460539_150460640	0.217763	ZIC2_GLI1	ENST00000520931.1|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1 	ENST00000520695.1|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1 	ENST00000521591.1|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1 	ENST00000518977.1|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1
hg19_v2_chr17_-_40835076_40835088	0.216572	ZIC2_GLI1	ENST00000591765.1|CCR10|ENSG00000184451.5|chemokine (C-C motif) receptor 10
hg19_v2_chr20_+_43343886_43344020	0.214849	ZIC2_GLI1	ENST00000190983.4|WISP2|ENSG00000064205.6|WNT1 inducible signaling pathway protein 2
hg19_v2_chr5_-_168727713_168727755	0.213802	ZIC2_GLI1	ENST00000404867.3|SLIT3|ENSG00000184347.10|slit homolog 3 (Drosophila)
hg19_v2_chr6_-_32784687_32784839	0.211641	ZIC2_GLI1	ENST00000447394.1|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta 	ENST00000438763.2|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta
hg19_v2_chr20_+_43343517_43343580	0.206202	ZIC2_GLI1	ENST00000372865.4|WISP2|ENSG00000064205.6|WNT1 inducible signaling pathway protein 2
hg19_v2_chr7_-_92465868_92465922	0.205741	ZIC2_GLI1	ENST00000424848.2|CDK6|ENSG00000105810.5|cyclin-dependent kinase 6
hg19_v2_chr18_+_21529811_21529857	0.205517	ZIC2_GLI1	ENST00000588004.1|LAMA3|ENSG00000053747.11|laminin, alpha 3
hg19_v2_chr16_-_1031259_1031327	0.204191	ZIC2_GLI1	ENST00000563837.1|RP11-161M6.2|ENSG00000260807.2|RP11-161M6.2	ENST00000570014.1|LMF1|ENSG00000103227.14|lipase maturation factor 1 	ENST00000563863.1|RP11-161M6.2|ENSG00000260807.2|RP11-161M6.2	ENST00000565069.1|RP11-161M6.2|ENSG00000260807.2|RP11-161M6.2
hg19_v2_chr18_-_44775554_44775554	0.203827	ZIC2_GLI1	ENST00000425639.1|SKOR2|ENSG00000215474.2|SKI family transcriptional corepressor 2 	ENST00000400404.1|SKOR2|ENSG00000215474.2|SKI family transcriptional corepressor 2
hg19_v2_chr17_-_37557846_37557920	0.199797	ZIC2_GLI1	ENST00000394294.3|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000583610.1|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000264658.6|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20
hg19_v2_chr10_-_18948208_18948219	0.196463	ZIC2_GLI1	ENST00000607346.1|ARL5B-AS1|ENSG00000152487.6|ARL5B antisense RNA 1
hg19_v2_chr9_-_98079965_98080008	0.19067	ZIC2_GLI1	ENST00000289081.3|FANCC|ENSG00000158169.7|Fanconi anemia, complementation group C
hg19_v2_chr20_+_43343476_43343487	0.189916	ZIC2_GLI1	ENST00000372868.2|WISP2|ENSG00000064205.6|WNT1 inducible signaling pathway protein 2
hg19_v2_chr17_-_27278445_27278624	0.186863	ZIC2_GLI1	ENST00000268756.3|PHF12|ENSG00000109118.9|PHD finger protein 12 	ENST00000584685.1|PHF12|ENSG00000109118.9|PHD finger protein 12
hg19_v2_chr14_+_24584508_24584583	0.179367	ZIC2_GLI1	ENST00000559354.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000560459.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000559593.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000396941.4|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000396936.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11
hg19_v2_chr7_-_108097144_108097175	0.179174	ZIC2_GLI1	ENST00000418239.1|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule
hg19_v2_chr12_-_6798025_6798102	0.176188	ZIC2_GLI1	ENST00000542351.1|ZNF384|ENSG00000126746.13|zinc finger protein 384 	ENST00000538829.1|ZNF384|ENSG00000126746.13|zinc finger protein 384
hg19_v2_chr5_-_150460914_150460997	0.172062	ZIC2_GLI1	ENST00000389378.2|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1
hg19_v2_chrX_+_47444613_47444741	0.171222	ZIC2_GLI1	ENST00000445623.1|TIMP1|ENSG00000102265.7|TIMP metallopeptidase inhibitor 1
hg19_v2_chr15_+_67430339_67430366	0.170996	ZIC2_GLI1	ENST00000439724.3|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr16_+_86612112_86612123	0.170837	ZIC2_GLI1	ENST00000320241.3|FOXL1|ENSG00000176678.4|forkhead box L1
hg19_v2_chr17_+_26989109_26989248	0.169391	ZIC2_GLI1	ENST00000314616.6|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae) 	ENST00000347486.4|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae)
hg19_v2_chr7_-_100034060_100034188	0.169374	ZIC2_GLI1	ENST00000292330.2|PPP1R35|ENSG00000160813.2|protein phosphatase 1, regulatory subunit 35
hg19_v2_chr16_+_57844549_57844549	0.166686	ZIC2_GLI1	ENST00000564282.1|CTD-2600O9.1|ENSG00000187185.3|uncharacterized protein LOC388282
hg19_v2_chrX_+_48687283_48687283	0.166345	ZIC2_GLI1	ENST00000338270.1|ERAS|ENSG00000187682.1|ES cell expressed Ras
hg19_v2_chr17_-_37558776_37558842	0.161682	ZIC2_GLI1	ENST00000577399.1|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20
hg19_v2_chr10_-_97050777_97050806	0.161638	ZIC2_GLI1	ENST00000329399.6|PDLIM1|ENSG00000107438.4|PDZ and LIM domain 1
hg19_v2_chr12_-_6798616_6798684	0.157122	ZIC2_GLI1	ENST00000355772.4|ZNF384|ENSG00000126746.13|zinc finger protein 384 	ENST00000417772.3|ZNF384|ENSG00000126746.13|zinc finger protein 384 	ENST00000396801.3|ZNF384|ENSG00000126746.13|zinc finger protein 384 	ENST00000396799.2|ZNF384|ENSG00000126746.13|zinc finger protein 384
hg19_v2_chr9_+_135037334_135037450	0.156465	ZIC2_GLI1	ENST00000393229.3|NTNG2|ENSG00000196358.6|netrin G2 	ENST00000360670.3|NTNG2|ENSG00000196358.6|netrin G2 	ENST00000393228.4|NTNG2|ENSG00000196358.6|netrin G2 	ENST00000372179.3|NTNG2|ENSG00000196358.6|netrin G2
hg19_v2_chr1_-_12677714_12677737	0.152898	ZIC2_GLI1	ENST00000376223.2|DHRS3|ENSG00000162496.4|dehydrogenase/reductase (SDR family) member 3
hg19_v2_chr20_+_62327996_62328021	0.148895	ZIC2_GLI1	ENST00000369996.1|TNFRSF6B|ENSG00000243509.4|tumor necrosis factor receptor superfamily, member 6b, decoy
hg19_v2_chr20_-_30310656_30310685	0.146874	ZIC2_GLI1	ENST00000376055.4|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr7_+_119913688_119913728	0.145507	ZIC2_GLI1	ENST00000331113.4|KCND2|ENSG00000184408.5|potassium voltage-gated channel, Shal-related subfamily, member 2
hg19_v2_chr20_-_30310693_30310719	0.14473	ZIC2_GLI1	ENST00000307677.4|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000420653.1|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr3_-_88108212_88108223	0.14385	ZIC2_GLI1	ENST00000482016.1|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr6_-_29600832_29600982	0.141574	ZIC2_GLI1	ENST00000377016.4|GABBR1|ENSG00000204681.6|gamma-aminobutyric acid (GABA) B receptor, 1 	ENST00000376977.3|GABBR1|ENSG00000204681.6|gamma-aminobutyric acid (GABA) B receptor, 1 	ENST00000377034.4|GABBR1|ENSG00000204681.6|gamma-aminobutyric acid (GABA) B receptor, 1
hg19_v2_chr2_-_133427767_133427797	0.140833	ZIC2_GLI1	ENST00000397463.2|LYPD1|ENSG00000150551.10|LY6/PLAUR domain containing 1
hg19_v2_chr19_+_4198072_4198137	0.140261	ZIC2_GLI1	ENST00000262970.5|ANKRD24|ENSG00000089847.8|ankyrin repeat domain 24
hg19_v2_chr1_+_36621529_36621585	0.137661	ZIC2_GLI1	ENST00000316156.4|MAP7D1|ENSG00000116871.11|MAP7 domain containing 1
hg19_v2_chr3_+_47844615_47844682	0.137195	ZIC2_GLI1	ENST00000348968.4|DHX30|ENSG00000132153.10|DEAH (Asp-Glu-Ala-His) box helicase 30
hg19_v2_chr7_+_114562909_114563131	0.135695	ZIC2_GLI1	ENST00000423503.1|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing 	ENST00000427207.1|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing
hg19_v2_chr3_+_47844399_47844457	0.134052	ZIC2_GLI1	ENST00000446256.2|DHX30|ENSG00000132153.10|DEAH (Asp-Glu-Ala-His) box helicase 30 	ENST00000445061.1|DHX30|ENSG00000132153.10|DEAH (Asp-Glu-Ala-His) box helicase 30
hg19_v2_chr17_+_73089382_73089451	0.132918	ZIC2_GLI1	ENST00000538213.2|SLC16A5|ENSG00000170190.11|solute carrier family 16 (monocarboxylate transporter), member 5 	ENST00000584118.1|SLC16A5|ENSG00000170190.11|solute carrier family 16 (monocarboxylate transporter), member 5
hg19_v2_chr1_-_205782304_205782332	0.132501	ZIC2_GLI1	ENST00000367137.3|SLC41A1|ENSG00000133065.6|solute carrier family 41 (magnesium transporter), member 1
hg19_v2_chr14_+_64971438_64971450	0.129821	ZIC2_GLI1	ENST00000555321.1|ZBTB1|ENSG00000126804.9|zinc finger and BTB domain containing 1
hg19_v2_chr10_-_77161533_77161590	0.129308	ZIC2_GLI1	ENST00000535216.1|ZNF503|ENSG00000165655.14|zinc finger protein 503
hg19_v2_chr6_-_19804973_19805010	0.128908	ZIC2_GLI1	ENST00000457670.1|RP4-625H18.2|ENSG00000228412.2|RP4-625H18.2	ENST00000607810.1|RP4-625H18.2|ENSG00000228412.2|RP4-625H18.2	ENST00000606628.1|RP4-625H18.2|ENSG00000228412.2|RP4-625H18.2
hg19_v2_chr12_-_45270077_45270143	0.128729	ZIC2_GLI1	ENST00000551601.1|NELL2|ENSG00000184613.6|NEL-like 2 (chicken) 	ENST00000549027.1|NELL2|ENSG00000184613.6|NEL-like 2 (chicken) 	ENST00000452445.2|NELL2|ENSG00000184613.6|NEL-like 2 (chicken)
hg19_v2_chr6_-_31620403_31620445	0.128522	ZIC2_GLI1	ENST00000451898.1|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6 	ENST00000439687.2|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6 	ENST00000362049.6|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6 	ENST00000424480.1|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6
hg19_v2_chr12_-_6798523_6798548	0.128456	ZIC2_GLI1	ENST00000319770.3|ZNF384|ENSG00000126746.13|zinc finger protein 384
hg19_v2_chr14_-_51561784_51561854	0.127957	ZIC2_GLI1	ENST00000360392.4|TRIM9|ENSG00000100505.9|tripartite motif containing 9
hg19_v2_chr7_-_112726393_112726567	0.127826	ZIC2_GLI1	ENST00000449591.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000449735.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000438062.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000424100.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85
hg19_v2_chr17_-_7137582_7137637	0.124709	ZIC2_GLI1	ENST00000575756.1|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2 	ENST00000575458.1|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2
hg19_v2_chr7_+_149411860_149411892	0.124224	ZIC2_GLI1	ENST00000486744.1|KRBA1|ENSG00000133619.13|KRAB-A domain containing 1
hg19_v2_chr1_+_24120143_24120157	0.122245	ZIC2_GLI1	ENST00000374501.1|LYPLA2|ENSG00000011009.6|lysophospholipase II
hg19_v2_chr14_+_92980111_92980190	0.120577	ZIC2_GLI1	ENST00000216487.7|RIN3|ENSG00000100599.11|Ras and Rab interactor 3 	ENST00000557762.1|RIN3|ENSG00000100599.11|Ras and Rab interactor 3
hg19_v2_chr15_-_41408409_41408552	0.118855	ZIC2_GLI1	ENST00000361937.3|INO80|ENSG00000128908.11|INO80 complex subunit
hg19_v2_chr4_-_134070250_134070277	0.117341	ZIC2_GLI1	ENST00000505289.1|RP11-9G1.3|ENSG00000250241.1|RP11-9G1.3	ENST00000509715.1|RP11-9G1.3|ENSG00000250241.1|RP11-9G1.3
hg19_v2_chr15_-_83224682_83224682	0.117031	ZIC2_GLI1	ENST00000562833.1|RP11-152F13.10|ENSG00000260836.1|RP11-152F13.10
hg19_v2_chr6_-_31620455_31620482	0.11614	ZIC2_GLI1	ENST00000437771.1|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6 	ENST00000404765.2|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6 	ENST00000375964.6|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6 	ENST00000211379.5|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6
hg19_v2_chr6_-_19804877_19804958	0.114818	ZIC2_GLI1	ENST00000447250.1|RP4-625H18.2|ENSG00000228412.2|RP4-625H18.2
hg19_v2_chr7_+_116312411_116312502	0.113378	ZIC2_GLI1	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr12_+_57522439_57522499	0.113086	ZIC2_GLI1	ENST00000338962.4|LRP1|ENSG00000123384.9|low density lipoprotein receptor-related protein 1
hg19_v2_chr13_-_30880979_30881008	0.111386	ZIC2_GLI1	ENST00000414289.1|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1
hg19_v2_chr14_+_24583836_24584053	0.111284	ZIC2_GLI1	ENST00000559115.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000558215.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000557810.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000561375.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000446197.3|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000559796.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000560713.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000560901.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000559382.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11
hg19_v2_chr20_-_30310797_30310901	0.111161	ZIC2_GLI1	ENST00000422920.1|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr21_-_28215332_28215347	0.110113	ZIC2_GLI1	ENST00000517777.1|ADAMTS1|ENSG00000154734.10|ADAM metallopeptidase with thrombospondin type 1 motif, 1
hg19_v2_chr18_-_31803435_31803515	0.109229	ZIC2_GLI1	ENST00000589544.1|NOL4|ENSG00000101746.11|nucleolar protein 4 	ENST00000269185.4|NOL4|ENSG00000101746.11|nucleolar protein 4 	ENST00000261592.5|NOL4|ENSG00000101746.11|nucleolar protein 4
hg19_v2_chrX_-_37706661_37706805	0.106803	ZIC2_GLI1	ENST00000432389.2|DYNLT3|ENSG00000165169.6|dynein, light chain, Tctex-type 3 	ENST00000378581.3|DYNLT3|ENSG00000165169.6|dynein, light chain, Tctex-type 3
hg19_v2_chr6_+_17281802_17281936	0.104375	ZIC2_GLI1	ENST00000509686.1|RBM24|ENSG00000112183.10|RNA binding motif protein 24
hg19_v2_chr17_+_4843654_4843676	0.104195	ZIC2_GLI1	ENST00000575111.1|RNF167|ENSG00000108523.11|ring finger protein 167
hg19_v2_chr16_+_86600857_86600921	0.102881	ZIC2_GLI1	ENST00000320354.4|FOXC2|ENSG00000176692.4|forkhead box C2 (MFH-1, mesenchyme forkhead 1)
hg19_v2_chr4_-_149363376_149363492	0.102625	ZIC2_GLI1	ENST00000512865.1|NR3C2|ENSG00000151623.10|nuclear receptor subfamily 3, group C, member 2
hg19_v2_chr11_-_65321198_65321289	0.102381	ZIC2_GLI1	ENST00000530426.1|LTBP3|ENSG00000168056.10|latent transforming growth factor beta binding protein 3
hg19_v2_chr6_-_31620095_31620135	0.102375	ZIC2_GLI1	ENST00000424176.1|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6 	ENST00000456622.1|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6
hg19_v2_chr10_-_77161650_77161664	0.0983292	ZIC2_GLI1	ENST00000372524.4|ZNF503|ENSG00000165655.14|zinc finger protein 503
hg19_v2_chr6_-_31620149_31620222	0.098168	ZIC2_GLI1	ENST00000435080.1|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6 	ENST00000375976.4|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6 	ENST00000441054.1|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6
hg19_v2_chr19_-_13617037_13617069	0.0980209	ZIC2_GLI1	ENST00000360228.5|CACNA1A|ENSG00000141837.14|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
hg19_v2_chr6_-_29600559_29600690	0.0978322	ZIC2_GLI1	ENST00000476670.1|GABBR1|ENSG00000204681.6|gamma-aminobutyric acid (GABA) B receptor, 1
hg19_v2_chr15_+_60296421_60296464	0.0972854	ZIC2_GLI1	ENST00000396057.4|FOXB1|ENSG00000171956.5|forkhead box B1
hg19_v2_chrX_+_70364667_70364721	0.0954826	ZIC2_GLI1	ENST00000536169.1|NLGN3|ENSG00000196338.8|neuroligin 3 	ENST00000395855.2|NLGN3|ENSG00000196338.8|neuroligin 3 	ENST00000374051.3|NLGN3|ENSG00000196338.8|neuroligin 3 	ENST00000358741.3|NLGN3|ENSG00000196338.8|neuroligin 3
hg19_v2_chr2_+_28113583_28113684	0.0954788	ZIC2_GLI1	ENST00000344773.2|BRE|ENSG00000158019.16|brain and reproductive organ-expressed (TNFRSF1A modulator) 	ENST00000379624.1|BRE|ENSG00000158019.16|brain and reproductive organ-expressed (TNFRSF1A modulator) 	ENST00000342045.2|BRE|ENSG00000158019.16|brain and reproductive organ-expressed (TNFRSF1A modulator) 	ENST00000379632.2|BRE|ENSG00000158019.16|brain and reproductive organ-expressed (TNFRSF1A modulator) 	ENST00000361704.2|BRE|ENSG00000158019.16|brain and reproductive organ-expressed (TNFRSF1A modulator)
hg19_v2_chr19_-_44285401_44285446	0.0941171	ZIC2_GLI1	ENST00000262888.3|KCNN4|ENSG00000104783.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
hg19_v2_chr21_-_36259445_36259519	0.0936223	ZIC2_GLI1	ENST00000399240.1|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr1_+_155293702_155293729	0.0920755	ZIC2_GLI1	ENST00000368347.4|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chr17_+_17876127_17876276	0.0912819	ZIC2_GLI1	ENST00000582416.1|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000313838.8|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000411504.2|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000581264.1|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000399187.1|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000479684.2|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000584166.1|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000585108.1|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000399182.1|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000579977.1|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48
hg19_v2_chr17_-_76732928_76732991	0.0902991	ZIC2_GLI1	ENST00000589768.1|CYTH1|ENSG00000108669.12|cytohesin 1
hg19_v2_chr11_-_57103327_57103372	0.0902268	ZIC2_GLI1	ENST00000529002.1|SSRP1|ENSG00000149136.3|structure specific recognition protein 1 	ENST00000278412.2|SSRP1|ENSG00000149136.3|structure specific recognition protein 1
hg19_v2_chr11_-_66104237_66104311	0.0899581	ZIC2_GLI1	ENST00000530056.1|RIN1|ENSG00000174791.6|Ras and Rab interactor 1
hg19_v2_chr15_-_41408339_41408360	0.0896593	ZIC2_GLI1	ENST00000401393.3|INO80|ENSG00000128908.11|INO80 complex subunit
hg19_v2_chr11_-_46848393_46848439	0.0890113	ZIC2_GLI1	ENST00000526496.1|CKAP5|ENSG00000175216.10|cytoskeleton associated protein 5
hg19_v2_chr8_+_31497271_31497285	0.0886543	ZIC2_GLI1	ENST00000520407.1|NRG1|ENSG00000157168.14|neuregulin 1
hg19_v2_chr10_-_77161004_77161176	0.0883094	ZIC2_GLI1	ENST00000418818.2|RP11-399K21.11|ENSG00000270087.1|RP11-399K21.11
hg19_v2_chrX_-_51812268_51812368	0.0880619	ZIC2_GLI1	ENST00000486010.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000497164.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000360134.6|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000485287.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000335504.5|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000431659.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B
hg19_v2_chr2_-_213403565_213403584	0.0871394	ZIC2_GLI1	ENST00000342788.4|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 	ENST00000436443.1|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4
hg19_v2_chr17_+_4843679_4843782	0.0869274	ZIC2_GLI1	ENST00000576229.1|RNF167|ENSG00000108523.11|ring finger protein 167
hg19_v2_chr17_+_43299156_43299174	0.0853375	ZIC2_GLI1	ENST00000331495.3|FMNL1|ENSG00000184922.9|formin-like 1
hg19_v2_chr17_+_7211280_7211341	0.0845485	ZIC2_GLI1	ENST00000419711.2|EIF5A|ENSG00000132507.13|eukaryotic translation initiation factor 5A 	ENST00000571955.1|EIF5A|ENSG00000132507.13|eukaryotic translation initiation factor 5A 	ENST00000573714.1|EIF5A|ENSG00000132507.13|eukaryotic translation initiation factor 5A
hg19_v2_chr12_-_57030115_57030177	0.0835954	ZIC2_GLI1	ENST00000379441.3|BAZ2A|ENSG00000076108.7|bromodomain adjacent to zinc finger domain, 2A 	ENST00000179765.5|BAZ2A|ENSG00000076108.7|bromodomain adjacent to zinc finger domain, 2A 	ENST00000551812.1|BAZ2A|ENSG00000076108.7|bromodomain adjacent to zinc finger domain, 2A
hg19_v2_chr19_+_58790314_58790358	0.08251	ZIC2_GLI1	ENST00000196548.5|ZNF8|ENSG00000083842.8|Zinc finger protein 8  	ENST00000608843.1|ZNF8|ENSG00000273439.1|zinc finger protein 8
hg19_v2_chr3_+_137717571_137717591	0.0823057	ZIC2_GLI1	ENST00000343735.4|CLDN18|ENSG00000066405.8|claudin 18
hg19_v2_chrX_+_90689810_90689826	0.0816594	ZIC2_GLI1	ENST00000312600.3|PABPC5|ENSG00000174740.7|poly(A) binding protein, cytoplasmic 5
hg19_v2_chr11_+_10477733_10477831	0.0807319	ZIC2_GLI1	ENST00000528723.1|AMPD3|ENSG00000133805.11|adenosine monophosphate deaminase 3
hg19_v2_chr9_-_34397800_34397830	0.0806967	ZIC2_GLI1	ENST00000297623.2|C9orf24|ENSG00000164972.8|chromosome 9 open reading frame 24
hg19_v2_chr7_-_151107106_151107129	0.0795216	ZIC2_GLI1	ENST00000334493.6|WDR86|ENSG00000187260.11|WD repeat domain 86
hg19_v2_chr1_+_209941942_209941964	0.0794995	ZIC2_GLI1	ENST00000487271.1|TRAF3IP3|ENSG00000009790.10|TRAF3 interacting protein 3 	ENST00000477431.1|TRAF3IP3|ENSG00000009790.10|TRAF3 interacting protein 3
hg19_v2_chr19_-_30199516_30199555	0.0792265	ZIC2_GLI1	ENST00000591243.1|C19orf12|ENSG00000131943.13|chromosome 19 open reading frame 12
hg19_v2_chr3_+_141496990_141496990	0.0767603	ZIC2_GLI1	ENST00000264952.2|GRK7|ENSG00000114124.2|G protein-coupled receptor kinase 7
hg19_v2_chr14_+_29236269_29236287	0.076503	ZIC2_GLI1	ENST00000313071.4|FOXG1|ENSG00000176165.7|forkhead box G1
hg19_v2_chr2_-_25016251_25016264	0.0761996	ZIC2_GLI1	ENST00000328379.5|PTRHD1|ENSG00000184924.5|peptidyl-tRNA hydrolase domain containing 1
hg19_v2_chr14_-_64971288_64971316	0.0754509	ZIC2_GLI1	ENST00000394715.1|ZBTB25|ENSG00000089775.7|zinc finger and BTB domain containing 25
hg19_v2_chr17_-_76778339_76778413	0.0751209	ZIC2_GLI1	ENST00000591455.1|CYTH1|ENSG00000108669.12|cytohesin 1 	ENST00000446868.3|CYTH1|ENSG00000108669.12|cytohesin 1 	ENST00000361101.4|CYTH1|ENSG00000108669.12|cytohesin 1 	ENST00000589296.1|CYTH1|ENSG00000108669.12|cytohesin 1
hg19_v2_chr15_+_74528630_74528672	0.074999	ZIC2_GLI1	ENST00000398814.3|CCDC33|ENSG00000140481.9|coiled-coil domain containing 33
hg19_v2_chrX_-_153236620_153236684	0.0746841	ZIC2_GLI1	ENST00000369984.4|HCFC1|ENSG00000172534.9|host cell factor C1 (VP16-accessory protein)
hg19_v2_chr3_+_137728842_137728952	0.072164	ZIC2_GLI1	ENST00000183605.5|CLDN18|ENSG00000066405.8|claudin 18
hg19_v2_chr7_+_149412094_149412148	0.0716117	ZIC2_GLI1	ENST00000255992.10|KRBA1|ENSG00000133619.13|KRAB-A domain containing 1 	ENST00000319551.8|KRBA1|ENSG00000133619.13|KRAB-A domain containing 1
hg19_v2_chr5_+_161494770_161494787	0.0715166	ZIC2_GLI1	ENST00000414552.2|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2 	ENST00000361925.4|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg19_v2_chr11_-_46142948_46143043	0.0714808	ZIC2_GLI1	ENST00000257821.4|PHF21A|ENSG00000135365.11|PHD finger protein 21A
hg19_v2_chrM_+_7586_7655	0.0712493	ZIC2_GLI1	ENST00000361739.1|MT-CO2|ENSG00000198712.1|mitochondrially encoded cytochrome c oxidase II
hg19_v2_chr22_-_30783356_30783415	0.0712409	ZIC2_GLI1	ENST00000382363.3|RNF215|ENSG00000099999.10|ring finger protein 215
hg19_v2_chr1_-_156023580_156023605	0.0703547	ZIC2_GLI1	ENST00000368309.3|UBQLN4|ENSG00000160803.7|ubiquilin 4
hg19_v2_chr12_-_117175819_117175887	0.068961	ZIC2_GLI1	ENST00000261318.3|C12orf49|ENSG00000111412.4|chromosome 12 open reading frame 49 	ENST00000536380.1|C12orf49|ENSG00000111412.4|chromosome 12 open reading frame 49
hg19_v2_chr11_+_45168182_45168226	0.0685508	ZIC2_GLI1	ENST00000526442.1|PRDM11|ENSG00000019485.8|PR domain containing 11
hg19_v2_chr12_-_45270151_45270162	0.0676523	ZIC2_GLI1	ENST00000429094.2|NELL2|ENSG00000184613.6|NEL-like 2 (chicken)
hg19_v2_chr19_+_50354462_50354482	0.0675459	ZIC2_GLI1	ENST00000601675.1|PTOV1|ENSG00000104960.11|prostate tumor overexpressed 1
hg19_v2_chr19_+_1495362_1495503	0.067159	ZIC2_GLI1	ENST00000395479.4|REEP6|ENSG00000115255.6|receptor accessory protein 6
hg19_v2_chr15_-_26108355_26108417	0.06646	ZIC2_GLI1	ENST00000356865.6|ATP10A|ENSG00000206190.7|ATPase, class V, type 10A
hg19_v2_chr12_-_31477072_31477110	0.066424	ZIC2_GLI1	ENST00000454658.2|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr6_+_163148973_163149044	0.066388	ZIC2_GLI1	ENST00000366888.2|PACRG|ENSG00000112530.7|PARK2 co-regulated
hg19_v2_chrX_-_23761317_23761419	0.0658531	ZIC2_GLI1	ENST00000492081.1|ACOT9|ENSG00000123130.12|acyl-CoA thioesterase 9 	ENST00000379303.5|ACOT9|ENSG00000123130.12|acyl-CoA thioesterase 9 	ENST00000336430.7|ACOT9|ENSG00000123130.12|acyl-CoA thioesterase 9
hg19_v2_chr6_-_31619892_31619964	0.065258	ZIC2_GLI1	ENST00000454165.1|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6 	ENST00000428326.1|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6 	ENST00000452994.1|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6
hg19_v2_chr9_+_8858102_8858147	0.0647141	ZIC2_GLI1	ENST00000447950.1|RP11-75C9.1|ENSG00000225706.1|RP11-75C9.1	ENST00000430766.1|RP11-75C9.1|ENSG00000225706.1|RP11-75C9.1
hg19_v2_chr8_+_30244580_30244749	0.0646283	ZIC2_GLI1	ENST00000523115.1|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing 	ENST00000519647.1|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing
hg19_v2_chr20_+_2082494_2082528	0.0645984	ZIC2_GLI1	ENST00000246032.3|STK35|ENSG00000125834.8|serine/threonine kinase 35
hg19_v2_chr20_+_35202909_35203075	0.0634555	ZIC2_GLI1	ENST00000558530.1|TGIF2-C20orf24|ENSG00000259399.1|TGIF2-C20orf24 readthrough 	ENST00000558028.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2 	ENST00000560025.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr7_-_150777874_150777918	0.0633233	ZIC2_GLI1	ENST00000540185.1|FASTK|ENSG00000164896.15|Fas-activated serine/threonine kinase
hg19_v2_chr2_-_68694390_68694434	0.062767	ZIC2_GLI1	ENST00000377957.3|FBXO48|ENSG00000204923.3|F-box protein 48
hg19_v2_chr3_+_67048721_67048760	0.0626905	ZIC2_GLI1	ENST00000295568.4|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000484414.1|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000460576.1|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000417314.2|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8
hg19_v2_chr11_-_46142615_46142729	0.0623661	ZIC2_GLI1	ENST00000529734.1|PHF21A|ENSG00000135365.11|PHD finger protein 21A 	ENST00000323180.6|PHF21A|ENSG00000135365.11|PHD finger protein 21A
hg19_v2_chr21_-_28217721_28217735	0.0622422	ZIC2_GLI1	ENST00000284984.3|ADAMTS1|ENSG00000154734.10|ADAM metallopeptidase with thrombospondin type 1 motif, 1
hg19_v2_chr3_+_113616317_113616364	0.0615982	ZIC2_GLI1	ENST00000440446.2|GRAMD1C|ENSG00000178075.15|GRAM domain containing 1C 	ENST00000488680.1|GRAMD1C|ENSG00000178075.15|GRAM domain containing 1C
hg19_v2_chr1_+_226736446_226736513	0.0613568	ZIC2_GLI1	ENST00000366788.3|C1orf95|ENSG00000203685.5|chromosome 1 open reading frame 95 	ENST00000366789.4|C1orf95|ENSG00000203685.5|chromosome 1 open reading frame 95
hg19_v2_chr9_+_131219250_131219275	0.0598129	ZIC2_GLI1	ENST00000470061.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr19_-_6424783_6424805	0.0594977	ZIC2_GLI1	ENST00000398148.3|KHSRP|ENSG00000088247.11|KH-type splicing regulatory protein
hg19_v2_chr19_-_13617247_13617319	0.0593253	ZIC2_GLI1	ENST00000573710.2|CACNA1A|ENSG00000141837.14|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
hg19_v2_chr15_-_75743915_75743933	0.0588751	ZIC2_GLI1	ENST00000394949.4|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A
hg19_v2_chr11_+_76493294_76493332	0.058169	ZIC2_GLI1	ENST00000533752.1|TSKU|ENSG00000182704.6|tsukushi, small leucine rich proteoglycan
hg19_v2_chr1_+_36690011_36690092	0.0577464	ZIC2_GLI1	ENST00000354618.5|THRAP3|ENSG00000054118.9|thyroid hormone receptor associated protein 3 	ENST00000469141.2|THRAP3|ENSG00000054118.9|thyroid hormone receptor associated protein 3 	ENST00000478853.1|THRAP3|ENSG00000054118.9|thyroid hormone receptor associated protein 3
hg19_v2_chr6_-_29595779_29595829	0.0555209	ZIC2_GLI1	ENST00000355973.3|GABBR1|ENSG00000204681.6|gamma-aminobutyric acid (GABA) B receptor, 1 	ENST00000377012.4|GABBR1|ENSG00000204681.6|gamma-aminobutyric acid (GABA) B receptor, 1
hg19_v2_chr19_+_36208877_36208921	0.0552289	ZIC2_GLI1	ENST00000420124.1|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B  	ENST00000222270.7|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B  	ENST00000341701.1|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B
hg19_v2_chr1_-_156460391_156460417	0.054202	ZIC2_GLI1	ENST00000360595.3|MEF2D|ENSG00000116604.13|myocyte enhancer factor 2D
hg19_v2_chr1_-_115053781_115053853	0.0541687	ZIC2_GLI1	ENST00000358465.2|TRIM33|ENSG00000197323.6|tripartite motif containing 33 	ENST00000369543.2|TRIM33|ENSG00000197323.6|tripartite motif containing 33
hg19_v2_chr11_-_64901900_64901974	0.0541577	ZIC2_GLI1	ENST00000526060.1|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin 	ENST00000307289.6|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin 	ENST00000528487.1|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin
hg19_v2_chr7_-_105516923_105516982	0.0539953	ZIC2_GLI1	ENST00000478915.1|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr20_+_32782375_32782385	0.0535981	ZIC2_GLI1	ENST00000568305.1|ASIP|ENSG00000101440.5|agouti signaling protein
hg19_v2_chr3_+_187871060_187871102	0.0534774	ZIC2_GLI1	ENST00000448637.1|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr11_-_12030681_12030692	0.0532243	ZIC2_GLI1	ENST00000529338.1|DKK3|ENSG00000050165.13|dickkopf WNT signaling pathway inhibitor 3
hg19_v2_chr22_-_28197486_28197544	0.0503254	ZIC2_GLI1	ENST00000302326.4|MN1|ENSG00000169184.5|meningioma (disrupted in balanced translocation) 1
hg19_v2_chr10_+_104404644_104404726	0.0502898	ZIC2_GLI1	ENST00000462202.2|TRIM8|ENSG00000171206.9|tripartite motif containing 8
hg19_v2_chr15_-_38852251_38852297	0.0493127	ZIC2_GLI1	ENST00000558432.1|RASGRP1|ENSG00000172575.7|RAS guanyl releasing protein 1 (calcium and DAG-regulated)
hg19_v2_chr12_+_120933859_120933899	0.0486898	ZIC2_GLI1	ENST00000242577.6|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000548214.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000392508.2|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1
hg19_v2_chr11_-_64901978_64902009	0.0475761	ZIC2_GLI1	ENST00000294256.8|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin 	ENST00000377190.3|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin
hg19_v2_chr1_+_47264711_47264754	0.0456662	ZIC2_GLI1	ENST00000371923.4|CYP4B1|ENSG00000142973.8|cytochrome P450, family 4, subfamily B, polypeptide 1 	ENST00000271153.4|CYP4B1|ENSG00000142973.8|cytochrome P450, family 4, subfamily B, polypeptide 1 	ENST00000371919.4|CYP4B1|ENSG00000142973.8|cytochrome P450, family 4, subfamily B, polypeptide 1
hg19_v2_chr9_+_131218336_131218366	0.0446771	ZIC2_GLI1	ENST00000372814.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr16_+_56899114_56899127	0.0446426	ZIC2_GLI1	ENST00000566786.1|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3 	ENST00000438926.2|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3 	ENST00000563236.1|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3 	ENST00000262502.5|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3
hg19_v2_chr17_+_38497640_38497647	0.0443011	ZIC2_GLI1	ENST00000394086.3|RARA|ENSG00000131759.13|retinoic acid receptor, alpha
hg19_v2_chr2_+_25015968_25016029	0.0440337	ZIC2_GLI1	ENST00000380834.2|CENPO|ENSG00000138092.6|centromere protein O 	ENST00000473706.1|CENPO|ENSG00000138092.6|centromere protein O
hg19_v2_chr16_+_28834303_28834467	0.0436335	ZIC2_GLI1	ENST00000340394.8|ATXN2L|ENSG00000168488.14|ataxin 2-like 	ENST00000325215.6|ATXN2L|ENSG00000168488.14|ataxin 2-like 	ENST00000395547.2|ATXN2L|ENSG00000168488.14|ataxin 2-like 	ENST00000336783.4|ATXN2L|ENSG00000168488.14|ataxin 2-like 	ENST00000382686.4|ATXN2L|ENSG00000168488.14|ataxin 2-like 	ENST00000564304.1|ATXN2L|ENSG00000168488.14|ataxin 2-like
hg19_v2_chr22_+_38201114_38201214	0.0434732	ZIC2_GLI1	ENST00000340857.2|H1F0|ENSG00000189060.4|H1 histone family, member 0
hg19_v2_chr2_-_208030647_208030689	0.0431049	ZIC2_GLI1	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr5_+_175792459_175792513	0.0428129	ZIC2_GLI1	ENST00000310389.5|ARL10|ENSG00000175414.6|ADP-ribosylation factor-like 10
hg19_v2_chr1_-_202776392_202776436	0.0424326	ZIC2_GLI1	ENST00000235790.4|KDM5B|ENSG00000117139.12|lysine (K)-specific demethylase 5B
hg19_v2_chr3_+_4535025_4535040	0.0424309	ZIC2_GLI1	ENST00000302640.8|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000354582.6|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000423119.2|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000357086.4|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000456211.2|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1
hg19_v2_chr21_+_34804479_34804626	0.0408405	ZIC2_GLI1	ENST00000421802.1|IFNGR2|ENSG00000159128.10|interferon gamma receptor 2 (interferon gamma transducer 1)
hg19_v2_chr11_-_11643540_11643566	0.0402818	ZIC2_GLI1	ENST00000227756.4|GALNT18|ENSG00000110328.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18
hg19_v2_chr20_+_30640004_30640091	0.0401176	ZIC2_GLI1	ENST00000520553.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000518730.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000375852.2|HCK|ENSG00000101336.8|hemopoietic cell kinase
hg19_v2_chr16_+_19183671_19183690	0.0400182	ZIC2_GLI1	ENST00000562711.2|SYT17|ENSG00000103528.12|synaptotagmin XVII
hg19_v2_chr11_-_65640071_65640125	0.0398319	ZIC2_GLI1	ENST00000526624.1|EFEMP2|ENSG00000172638.8|EGF containing fibulin-like extracellular matrix protein 2
hg19_v2_chr1_+_44679113_44679152	0.0397844	ZIC2_GLI1	ENST00000361745.6|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1 	ENST00000446292.1|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1 	ENST00000440641.1|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1 	ENST00000436069.1|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1 	ENST00000437511.1|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1
hg19_v2_chr2_-_128643496_128643496	0.0392646	ZIC2_GLI1	ENST00000272647.5|AMMECR1L|ENSG00000144233.5|AMMECR1-like
hg19_v2_chr2_+_159825143_159825190	0.0383673	ZIC2_GLI1	ENST00000454300.1|TANC1|ENSG00000115183.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 	ENST00000263635.6|TANC1|ENSG00000115183.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
hg19_v2_chr4_+_134070439_134070470	0.0382108	ZIC2_GLI1	ENST00000264360.5|PCDH10|ENSG00000138650.7|protocadherin 10
hg19_v2_chr19_+_1383890_1383922	0.0379172	ZIC2_GLI1	ENST00000539480.1|NDUFS7|ENSG00000115286.15|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase) 	ENST00000313408.7|NDUFS7|ENSG00000115286.15|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase) 	ENST00000414651.2|NDUFS7|ENSG00000115286.15|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)
hg19_v2_chr22_-_30783075_30783141	0.0373152	ZIC2_GLI1	ENST00000215798.6|RNF215|ENSG00000099999.10|ring finger protein 215
hg19_v2_chr9_-_116159635_116159682	0.0370278	ZIC2_GLI1	ENST00000452726.1|ALAD|ENSG00000148218.11|aminolevulinate dehydratase
hg19_v2_chr11_-_64527425_64527461	0.0369663	ZIC2_GLI1	ENST00000377432.3|PYGM|ENSG00000068976.9|phosphorylase, glycogen, muscle
hg19_v2_chr8_-_22014339_22014345	0.0368102	ZIC2_GLI1	ENST00000306317.2|LGI3|ENSG00000168481.4|leucine-rich repeat LGI family, member 3
hg19_v2_chr15_+_74421961_74422007	0.0363445	ZIC2_GLI1	ENST00000565159.1|ISLR2|ENSG00000167178.11|immunoglobulin superfamily containing leucine-rich repeat 2 	ENST00000567206.1|ISLR2|ENSG00000167178.11|immunoglobulin superfamily containing leucine-rich repeat 2
hg19_v2_chr17_-_40540484_40540537	0.036263	ZIC2_GLI1	ENST00000588969.1|STAT3|ENSG00000168610.10|signal transducer and activator of transcription 3 (acute-phase response factor)
hg19_v2_chr10_-_95360983_95360999	0.0359969	ZIC2_GLI1	ENST00000371464.3|RBP4|ENSG00000138207.8|retinol binding protein 4, plasma
hg19_v2_chr1_+_6673745_6673830	0.0353498	ZIC2_GLI1	ENST00000377648.4|PHF13|ENSG00000116273.5|PHD finger protein 13
hg19_v2_chr9_+_131219179_131219198	0.0352638	ZIC2_GLI1	ENST00000372791.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr3_+_4535155_4535234	0.0352258	ZIC2_GLI1	ENST00000544951.1|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1
hg19_v2_chr15_-_101142401_101142445	0.0351834	ZIC2_GLI1	ENST00000314742.8|LINS|ENSG00000140471.12|lines homolog (Drosophila)
hg19_v2_chr12_+_122516626_122516645	0.0350887	ZIC2_GLI1	ENST00000319080.7|MLXIP|ENSG00000175727.9|MLX interacting protein
hg19_v2_chr2_+_217498105_217498129	0.0348665	ZIC2_GLI1	ENST00000233809.4|IGFBP2|ENSG00000115457.5|insulin-like growth factor binding protein 2, 36kDa
hg19_v2_chr11_+_117049910_117050085	0.0330856	ZIC2_GLI1	ENST00000431081.2|SIDT2|ENSG00000149577.11|SID1 transmembrane family, member 2 	ENST00000524842.1|SIDT2|ENSG00000149577.11|SID1 transmembrane family, member 2
hg19_v2_chr16_-_21452040_21452040	0.0329757	ZIC2_GLI1	ENST00000521589.1|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3
hg19_v2_chr19_+_36602104_36602105	0.0327685	ZIC2_GLI1	ENST00000585332.1|OVOL3|ENSG00000105261.5|ovo-like zinc finger 3 	ENST00000262637.4|OVOL3|ENSG00000105261.5|ovo-like zinc finger 3
hg19_v2_chr15_-_43882140_43882140	0.0327611	ZIC2_GLI1	ENST00000429176.1|PPIP5K1|ENSG00000168781.17|diphosphoinositol pentakisphosphate kinase 1
hg19_v2_chr19_+_12848299_12848317	0.032579	ZIC2_GLI1	ENST00000357332.3|ASNA1|ENSG00000198356.7|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)
hg19_v2_chr16_+_88493879_88493879	0.0323782	ZIC2_GLI1	ENST00000565624.1|ZNF469|ENSG00000225614.2|zinc finger protein 469 	ENST00000437464.1|ZNF469|ENSG00000225614.2|zinc finger protein 469
hg19_v2_chr20_+_30639991_30640001	0.0323448	ZIC2_GLI1	ENST00000534862.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000538448.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000375862.2|HCK|ENSG00000101336.8|hemopoietic cell kinase
hg19_v2_chr11_+_64009072_64009220	0.0299859	ZIC2_GLI1	ENST00000535135.1|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa 	ENST00000394540.3|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa
hg19_v2_chr10_-_35104185_35104267	0.0294862	ZIC2_GLI1	ENST00000374789.3|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000374788.3|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000346874.4|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000374794.3|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000350537.4|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000374790.3|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000374776.1|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000374773.1|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000545693.1|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000545260.1|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000340077.5|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator
hg19_v2_chr2_+_25016282_25016339	0.0292049	ZIC2_GLI1	ENST00000260662.1|CENPO|ENSG00000138092.6|centromere protein O
hg19_v2_chr12_+_31477250_31477250	0.0291918	ZIC2_GLI1	ENST00000313737.4|AC024940.1|ENSG00000177340.4|AC024940.1
hg19_v2_chr17_-_27278304_27278408	0.0290538	ZIC2_GLI1	ENST00000577226.1|PHF12|ENSG00000109118.9|PHD finger protein 12
hg19_v2_chr11_+_34938119_34938204	0.0289951	ZIC2_GLI1	ENST00000227868.4|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X 	ENST00000430469.2|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X 	ENST00000533262.1|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X
hg19_v2_chr7_+_31009148_31009197	0.028913	ZIC2_GLI1	ENST00000409904.3|GHRHR|ENSG00000106128.14|growth hormone releasing hormone receptor 	ENST00000409316.1|GHRHR|ENSG00000106128.14|growth hormone releasing hormone receptor
hg19_v2_chr6_-_134373732_134373795	0.0287738	ZIC2_GLI1	ENST00000275230.5|SLC2A12|ENSG00000146411.5|solute carrier family 2 (facilitated glucose transporter), member 12
hg19_v2_chr15_-_65282232_65282271	0.0284611	ZIC2_GLI1	ENST00000416889.2|SPG21|ENSG00000090487.6|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v2_chr1_+_44679370_44679513	0.0280545	ZIC2_GLI1	ENST00000372290.4|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1
hg19_v2_chr9_+_131174024_131174054	0.0261089	ZIC2_GLI1	ENST00000420034.1|CERCAM|ENSG00000167123.14|cerebral endothelial cell adhesion molecule 	ENST00000372842.1|CERCAM|ENSG00000167123.14|cerebral endothelial cell adhesion molecule
hg19_v2_chr1_-_108786689_108786689	0.025879	ZIC2_GLI1	ENST00000415641.3|NBPF4|ENSG00000196427.9|neuroblastoma breakpoint family, member 4
hg19_v2_chr12_+_120933904_120933923	0.025587	ZIC2_GLI1	ENST00000550178.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000550845.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000549989.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000552870.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1
hg19_v2_chr17_+_4736627_4736720	0.0255867	ZIC2_GLI1	ENST00000355280.6|MINK1|ENSG00000141503.11|misshapen-like kinase 1 	ENST00000347992.7|MINK1|ENSG00000141503.11|misshapen-like kinase 1
hg19_v2_chr19_-_13068012_13068053	0.0252934	ZIC2_GLI1	ENST00000316939.1|GADD45GIP1|ENSG00000179271.1|growth arrest and DNA-damage-inducible, gamma interacting protein 1
hg19_v2_chr13_-_30881134_30881181	0.0247491	ZIC2_GLI1	ENST00000380617.3|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1 	ENST00000441394.1|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1
hg19_v2_chr3_-_129513259_129513392	0.0243475	ZIC2_GLI1	ENST00000329333.5|TMCC1|ENSG00000172765.12|transmembrane and coiled-coil domain family 1
hg19_v2_chr4_-_186697044_186697066	0.024195	ZIC2_GLI1	ENST00000437304.2|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr10_+_24755416_24755470	0.0240025	ZIC2_GLI1	ENST00000396446.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000396445.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000376451.2|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr11_+_33278811_33279133	0.0239782	ZIC2_GLI1	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr11_+_64001962_64002033	0.0232571	ZIC2_GLI1	ENST00000309422.2|VEGFB|ENSG00000173511.5|vascular endothelial growth factor B
hg19_v2_chr6_+_20403997_20404034	0.0221664	ZIC2_GLI1	ENST00000535432.1|E2F3|ENSG00000112242.10|E2F transcription factor 3
hg19_v2_chr14_-_107199464_107199472	0.0215693	ZIC2_GLI1	ENST00000433072.2|IGHV3-72|ENSG00000225698.2|immunoglobulin heavy variable 3-72
hg19_v2_chr9_+_109625378_109625458	0.0214277	ZIC2_GLI1	ENST00000277225.5|ZNF462|ENSG00000148143.8|zinc finger protein 462 	ENST00000457913.1|ZNF462|ENSG00000148143.8|zinc finger protein 462 	ENST00000472574.1|ZNF462|ENSG00000148143.8|zinc finger protein 462
hg19_v2_chr9_+_136399929_136399975	0.0211196	ZIC2_GLI1	ENST00000393060.1|ADAMTSL2|ENSG00000197859.5|ADAMTS-like 2
hg19_v2_chr4_+_62067860_62067900	0.0211162	ZIC2_GLI1	ENST00000514591.1|LPHN3|ENSG00000150471.11|latrophilin 3
hg19_v2_chr17_+_4843594_4843635	0.0208671	ZIC2_GLI1	ENST00000570328.1|RNF167|ENSG00000108523.11|ring finger protein 167
hg19_v2_chr11_+_66036004_66036079	0.0204091	ZIC2_GLI1	ENST00000311481.6|RAB1B|ENSG00000174903.10|RAB1B, member RAS oncogene family 	ENST00000527397.1|RAB1B|ENSG00000174903.10|RAB1B, member RAS oncogene family
hg19_v2_chr2_-_85829496_85829544	0.0192971	ZIC2_GLI1	ENST00000409668.1|TMEM150A|ENSG00000168890.9|transmembrane protein 150A
hg19_v2_chr20_+_57427765_57427783	0.0190994	ZIC2_GLI1	ENST00000371100.4|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr2_-_51259528_51259554	0.0181949	ZIC2_GLI1	ENST00000404971.1|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chr22_-_19166343_19166380	0.0181753	ZIC2_GLI1	ENST00000215882.5|SLC25A1|ENSG00000100075.5|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
hg19_v2_chr18_-_3880051_3880135	0.0180284	ZIC2_GLI1	ENST00000584874.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr9_-_130639997_130640022	0.0176498	ZIC2_GLI1	ENST00000373176.1|AK1|ENSG00000106992.13|adenylate kinase 1
hg19_v2_chr22_+_37447771_37447916	0.0175014	ZIC2_GLI1	ENST00000402077.3|KCTD17|ENSG00000100379.13|potassium channel tetramerization domain containing 17 	ENST00000403888.3|KCTD17|ENSG00000100379.13|potassium channel tetramerization domain containing 17 	ENST00000456470.1|KCTD17|ENSG00000100379.13|potassium channel tetramerization domain containing 17
hg19_v2_chr19_-_14629224_14629262	0.01737	ZIC2_GLI1	ENST00000254322.2|DNAJB1|ENSG00000132002.3|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v2_chr2_+_136289030_136289087	0.0173373	ZIC2_GLI1	ENST00000409478.1|R3HDM1|ENSG00000048991.12|R3H domain containing 1 	ENST00000264160.4|R3HDM1|ENSG00000048991.12|R3H domain containing 1 	ENST00000329971.3|R3HDM1|ENSG00000048991.12|R3H domain containing 1 	ENST00000438014.1|R3HDM1|ENSG00000048991.12|R3H domain containing 1
hg19_v2_chr17_+_17380294_17380351	0.0167623	ZIC2_GLI1	ENST00000268711.3|MED9|ENSG00000141026.4|mediator complex subunit 9 	ENST00000580462.1|MED9|ENSG00000141026.4|mediator complex subunit 9
hg19_v2_chr6_+_111408698_111408781	0.0162766	ZIC2_GLI1	ENST00000368851.5|SLC16A10|ENSG00000112394.12|solute carrier family 16 (aromatic amino acid transporter), member 10
hg19_v2_chr21_-_34100244_34100277	0.0157083	ZIC2_GLI1	ENST00000382491.3|SYNJ1|ENSG00000159082.13|synaptojanin 1 	ENST00000357345.3|SYNJ1|ENSG00000159082.13|synaptojanin 1 	ENST00000429236.1|SYNJ1|ENSG00000159082.13|synaptojanin 1
hg19_v2_chr12_-_57030096_57030106	0.0153894	ZIC2_GLI1	ENST00000549506.1|BAZ2A|ENSG00000076108.7|bromodomain adjacent to zinc finger domain, 2A
hg19_v2_chr17_+_46132037_46132080	0.0152987	ZIC2_GLI1	ENST00000582155.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000583378.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000536222.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1
hg19_v2_chr9_-_122131696_122131745	0.0142647	ZIC2_GLI1	ENST00000373964.2|BRINP1|ENSG00000078725.8|bone morphogenetic protein/retinoic acid inducible neural-specific 1 	ENST00000265922.3|BRINP1|ENSG00000078725.8|bone morphogenetic protein/retinoic acid inducible neural-specific 1
hg19_v2_chr9_-_35103105_35103154	0.0139024	ZIC2_GLI1	ENST00000452248.2|STOML2|ENSG00000165283.11|stomatin (EPB72)-like 2 	ENST00000356493.5|STOML2|ENSG00000165283.11|stomatin (EPB72)-like 2
hg19_v2_chr15_+_40861487_40861552	0.0136781	ZIC2_GLI1	ENST00000315616.7|RPUSD2|ENSG00000166133.13|RNA pseudouridylate synthase domain containing 2 	ENST00000559271.1|RPUSD2|ENSG00000166133.13|RNA pseudouridylate synthase domain containing 2
hg19_v2_chr3_-_10028366_10028552	0.0132515	ZIC2_GLI1	ENST00000429759.1|EMC3|ENSG00000125037.8|ER membrane protein complex subunit 3
hg19_v2_chrX_-_140271249_140271333	0.012381	ZIC2_GLI1	ENST00000370526.2|LDOC1|ENSG00000182195.6|leucine zipper, down-regulated in cancer 1
hg19_v2_chr19_-_39330818_39330818	0.0122613	ZIC2_GLI1	ENST00000594769.1|AC104534.3|ENSG00000268083.1|Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial  	ENST00000602021.1|AC104534.3|ENSG00000268083.1|Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
hg19_v2_chr9_+_34990219_34990312	0.012257	ZIC2_GLI1	ENST00000541010.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000454002.2|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000545841.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5
hg19_v2_chr8_-_41522779_41522804	0.0115626	ZIC2_GLI1	ENST00000522231.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000314214.8|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000348036.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000457297.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000522543.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic
hg19_v2_chr17_-_7137857_7137869	0.0114699	ZIC2_GLI1	ENST00000005340.5|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2
hg19_v2_chrX_+_152240819_152240839	0.0114631	ZIC2_GLI1	ENST00000421798.3|PNMA6C|ENSG00000235961.3|paraneoplastic Ma antigen family member 6C 	ENST00000535416.1|PNMA6A|ENSG00000224201.3|paraneoplastic Ma antigen family member 6A
hg19_v2_chr1_+_108918421_108918421	0.0114115	ZIC2_GLI1	ENST00000444143.2|NBPF6|ENSG00000186086.12|neuroblastoma breakpoint family, member 6 	ENST00000294652.8|NBPF6|ENSG00000186086.12|neuroblastoma breakpoint family, member 6
hg19_v2_chr17_-_26989136_26989218	0.0111935	ZIC2_GLI1	ENST00000247020.4|SDF2|ENSG00000132581.5|stromal cell-derived factor 2
hg19_v2_chr20_+_3451732_3451755	0.0110143	ZIC2_GLI1	ENST00000446916.2|ATRN|ENSG00000088812.13|attractin
hg19_v2_chr12_+_57854274_57854274	0.0108144	ZIC2_GLI1	ENST00000528432.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1
hg19_v2_chr16_+_29819372_29819442	0.0108108	ZIC2_GLI1	ENST00000568544.1|MAZ|ENSG00000103495.9|MYC-associated zinc finger protein (purine-binding transcription factor) 	ENST00000569978.1|MAZ|ENSG00000103495.9|MYC-associated zinc finger protein (purine-binding transcription factor)
hg19_v2_chr17_+_6926339_6926377	0.0106922	ZIC2_GLI1	ENST00000293805.5|BCL6B|ENSG00000161940.6|B-cell CLL/lymphoma 6, member B
hg19_v2_chr12_-_25801478_25801520	0.0104152	ZIC2_GLI1	ENST00000540106.1|IFLTD1|ENSG00000152936.6|intermediate filament tail domain containing 1 	ENST00000445693.1|IFLTD1|ENSG00000152936.6|intermediate filament tail domain containing 1 	ENST00000545543.1|IFLTD1|ENSG00000152936.6|intermediate filament tail domain containing 1 	ENST00000542224.1|IFLTD1|ENSG00000152936.6|intermediate filament tail domain containing 1
hg19_v2_chr14_+_77228532_77228672	0.0100629	ZIC2_GLI1	ENST00000167106.4|VASH1|ENSG00000071246.6|vasohibin 1 	ENST00000554237.1|VASH1|ENSG00000071246.6|vasohibin 1
hg19_v2_chr14_+_24584056_24584075	0.0098755	ZIC2_GLI1	ENST00000561001.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11
hg19_v2_chr11_-_75379612_75379726	0.00948672	ZIC2_GLI1	ENST00000526740.1|MAP6|ENSG00000171533.7|microtubule-associated protein 6
hg19_v2_chr17_-_40540377_40540481	0.00926883	ZIC2_GLI1	ENST00000404395.3|STAT3|ENSG00000168610.10|signal transducer and activator of transcription 3 (acute-phase response factor) 	ENST00000389272.3|STAT3|ENSG00000168610.10|signal transducer and activator of transcription 3 (acute-phase response factor) 	ENST00000585517.1|STAT3|ENSG00000168610.10|signal transducer and activator of transcription 3 (acute-phase response factor) 	ENST00000588065.1|STAT3|ENSG00000168610.10|signal transducer and activator of transcription 3 (acute-phase response factor)
hg19_v2_chr2_-_51259641_51259674	0.00925301	ZIC2_GLI1	ENST00000406316.2|NRXN1|ENSG00000179915.16|neurexin 1 	ENST00000405581.1|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chr9_-_8857776_8857878	0.0092358	ZIC2_GLI1	ENST00000481079.1|PTPRD|ENSG00000153707.11|protein tyrosine phosphatase, receptor type, D
hg19_v2_chr6_+_160183492_160183523	0.00862541	ZIC2_GLI1	ENST00000541436.1|ACAT2|ENSG00000120437.7|acetyl-CoA acetyltransferase 2
hg19_v2_chr3_-_135915401_135915439	0.00830495	ZIC2_GLI1	ENST00000491050.1|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr4_-_1657135_1657135	0.00798659	ZIC2_GLI1	ENST00000489029.1|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A
hg19_v2_chr22_-_19165917_19166034	0.0078469	ZIC2_GLI1	ENST00000451283.1|SLC25A1|ENSG00000100075.5|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
hg19_v2_chr9_+_131218408_131218487	0.00746169	ZIC2_GLI1	ENST00000351030.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000604420.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000535026.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000448249.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000393527.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr18_+_52385068_52385114	0.00654754	ZIC2_GLI1	ENST00000586570.1|RAB27B|ENSG00000041353.5|RAB27B, member RAS oncogene family
hg19_v2_chr1_+_44679159_44679189	0.00652248	ZIC2_GLI1	ENST00000315913.5|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1 	ENST00000372289.2|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1
hg19_v2_chr11_-_71810258_71810304	0.00582414	ZIC2_GLI1	ENST00000544594.1|LAMTOR1|ENSG00000149357.5|late endosomal/lysosomal adaptor, MAPK and MTOR activator 1
hg19_v2_chr9_-_139372141_139372141	0.0057112	ZIC2_GLI1	ENST00000313050.7|SEC16A|ENSG00000148396.14|SEC16 homolog A (S. cerevisiae)
hg19_v2_chr19_-_14628645_14628781	0.00490803	ZIC2_GLI1	ENST00000598235.1|DNAJB1|ENSG00000132002.3|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v2_chr20_-_62493217_62493217	0.00427925	ZIC2_GLI1	ENST00000601296.1|C20ORF135|ENSG00000268858.1|C20ORF135
hg19_v2_chr9_-_73483926_73483945	0.0040521	ZIC2_GLI1	ENST00000396283.1|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000361823.5|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3
hg19_v2_chr19_+_4969116_4969143	0.00399925	ZIC2_GLI1	ENST00000588337.1|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000159111.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000381759.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B
hg19_v2_chr5_+_157158205_157158205	0.00398725	ZIC2_GLI1	ENST00000231198.7|THG1L|ENSG00000113272.9|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
hg19_v2_chr21_-_34100341_34100359	0.00362466	ZIC2_GLI1	ENST00000382499.2|SYNJ1|ENSG00000159082.13|synaptojanin 1 	ENST00000433931.2|SYNJ1|ENSG00000159082.13|synaptojanin 1
hg19_v2_chr15_+_81591757_81591780	0.00292056	ZIC2_GLI1	ENST00000558332.1|IL16|ENSG00000172349.12|interleukin 16
hg19_v2_chr5_+_176237478_176237496	0.00244537	ZIC2_GLI1	ENST00000329542.4|UNC5A|ENSG00000113763.6|unc-5 homolog A (C. elegans)
hg19_v2_chr15_-_65282274_65282281	0.00158925	ZIC2_GLI1	ENST00000204566.2|SPG21|ENSG00000090487.6|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v2_chr11_+_45868957_45869044	0.00147742	ZIC2_GLI1	ENST00000443527.2|CRY2|ENSG00000121671.7|cryptochrome 2 (photolyase-like)
hg19_v2_chr3_-_16554403_16554429	0.00136236	ZIC2_GLI1	ENST00000449415.1|RFTN1|ENSG00000131378.9|raftlin, lipid raft linker 1 	ENST00000441460.1|RFTN1|ENSG00000131378.9|raftlin, lipid raft linker 1
hg19_v2_chr11_-_30607819_30607867	0.00116488	ZIC2_GLI1	ENST00000448418.2|MPPED2|ENSG00000066382.12|metallophosphoesterase domain containing 2
hg19_v2_chr12_-_129308041_129308100	0.000985971	ZIC2_GLI1	ENST00000376740.4|SLC15A4|ENSG00000139370.6|solute carrier family 15 (oligopeptide transporter), member 4
hg19_v2_chr20_-_50722183_50722217	0.000966188	ZIC2_GLI1	ENST00000371523.4|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein
hg19_v2_chr7_-_99679324_99679371	0.000704889	ZIC2_GLI1	ENST00000292393.5|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000413658.2|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000412947.1|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000441298.1|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000449785.1|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000299667.4|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000424697.1|ZNF3|ENSG00000166526.12|zinc finger protein 3
hg19_v2_chr12_+_72148614_72148699	0.000576213	ZIC2_GLI1	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chrX_+_54835493_54835584	0.000536216	ZIC2_GLI1	ENST00000396224.1|MAGED2|ENSG00000102316.12|melanoma antigen family D, 2
