hg19_v2_chr11_+_95523621_95523710	0.460408	UGAAAUG	ENST00000325542.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000325486.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000544522.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000541365.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr8_-_82598511_82598570	0.451542	UGAAAUG	ENST00000449740.2|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000311489.4|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000521360.1|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000519964.1|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000518202.1|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1
hg19_v2_chr7_-_11871815_11871831	0.415883	UGAAAUG	ENST00000423059.4|THSD7A|ENSG00000005108.11|thrombospondin, type I, domain containing 7A
hg19_v2_chr1_+_65613217_65613331	0.409019	UGAAAUG	ENST00000545314.1|AK4|ENSG00000162433.10|adenylate kinase 4
hg19_v2_chr5_+_82767284_82767310	0.393946	UGAAAUG	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr6_+_143772060_143772117	0.393173	UGAAAUG	ENST00000367591.4|PEX3|ENSG00000034693.10|peroxisomal biogenesis factor 3
hg19_v2_chr18_+_52495426_52495430	0.365115	UGAAAUG	ENST00000262094.5|RAB27B|ENSG00000041353.5|RAB27B, member RAS oncogene family
hg19_v2_chr4_-_140477928_140477990	0.361391	UGAAAUG	ENST00000274031.3|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7
hg19_v2_chr8_+_95732095_95732159	0.350149	UGAAAUG	ENST00000414645.2|DPY19L4|ENSG00000156162.12|dpy-19-like 4 (C. elegans)
hg19_v2_chr3_+_178866199_178866311	0.348183	UGAAAUG	ENST00000263967.3|PIK3CA|ENSG00000121879.3|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
hg19_v2_chr6_+_64281906_64281922	0.340919	UGAAAUG	ENST00000370651.3|PTP4A1|ENSG00000112245.6|protein tyrosine phosphatase type IVA, member 1
hg19_v2_chr4_+_174089904_174089921	0.334092	UGAAAUG	ENST00000265000.4|GALNT7|ENSG00000109586.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)
hg19_v2_chr14_-_50319758_50319921	0.309424	UGAAAUG	ENST00000298310.5|NEMF|ENSG00000165525.13|nuclear export mediator factor
hg19_v2_chr4_-_155533787_155534119	0.299478	UGAAAUG	ENST00000407946.1|FGG|ENSG00000171557.12|fibrinogen gamma chain 	ENST00000405164.1|FGG|ENSG00000171557.12|fibrinogen gamma chain 	ENST00000336098.3|FGG|ENSG00000171557.12|fibrinogen gamma chain 	ENST00000393846.2|FGG|ENSG00000171557.12|fibrinogen gamma chain 	ENST00000404648.3|FGG|ENSG00000171557.12|fibrinogen gamma chain 	ENST00000443553.1|FGG|ENSG00000171557.12|fibrinogen gamma chain
hg19_v2_chr3_-_123304017_123304040	0.286678	UGAAAUG	ENST00000383657.5|PTPLB|ENSG00000206527.5|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b
hg19_v2_chr3_-_178790057_178790072	0.285766	UGAAAUG	ENST00000311417.2|ZMAT3|ENSG00000172667.6|zinc finger, matrin-type 3
hg19_v2_chr18_+_657578_657604	0.278364	UGAAAUG	ENST00000323274.10|TYMS|ENSG00000176890.11|thymidylate synthetase
hg19_v2_chr6_+_80341000_80341025	0.272595	UGAAAUG	ENST00000369838.4|SH3BGRL2|ENSG00000198478.6|SH3 domain binding glutamic acid-rich protein like 2
hg19_v2_chr11_+_34073195_34073266	0.272415	UGAAAUG	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr13_-_67804445_67804475	0.26693	UGAAAUG	ENST00000456367.1|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000377861.3|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000544246.1|PCDH9|ENSG00000184226.10|protocadherin 9
hg19_v2_chr1_-_70671216_70671303	0.266851	UGAAAUG	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr3_+_45636219_45636351	0.263917	UGAAAUG	ENST00000273317.4|LIMD1|ENSG00000144791.5|LIM domains containing 1
hg19_v2_chr5_-_89770582_89770603	0.262807	UGAAAUG	ENST00000316610.6|MBLAC2|ENSG00000176055.9|metallo-beta-lactamase domain containing 2
hg19_v2_chr18_+_42260861_42260882	0.262266	UGAAAUG	ENST00000282030.5|SETBP1|ENSG00000152217.12|SET binding protein 1
hg19_v2_chr15_+_57210818_57210930	0.261154	UGAAAUG	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr6_-_52859046_52859201	0.259888	UGAAAUG	ENST00000457564.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4 	ENST00000541324.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4 	ENST00000370960.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4
hg19_v2_chr20_+_56884752_56884799	0.258725	UGAAAUG	ENST00000244040.3|RAB22A|ENSG00000124209.3|RAB22A, member RAS oncogene family
hg19_v2_chr1_+_117910047_117910131	0.251089	UGAAAUG	ENST00000356554.3|MAN1A2|ENSG00000198162.8|mannosidase, alpha, class 1A, member 2
hg19_v2_chr5_+_162864575_162864620	0.239628	UGAAAUG	ENST00000512163.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000393929.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000340828.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511683.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510097.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511490.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510664.1|CCNG1|ENSG00000113328.14|cyclin G1
hg19_v2_chr12_-_15374343_15374416	0.238522	UGAAAUG	ENST00000256953.2|RERG|ENSG00000134533.2|RAS-like, estrogen-regulated, growth inhibitor 	ENST00000546331.1|RERG|ENSG00000134533.2|RAS-like, estrogen-regulated, growth inhibitor
hg19_v2_chr9_+_114659046_114659102	0.231371	UGAAAUG	ENST00000374279.3|UGCG|ENSG00000148154.5|UDP-glucose ceramide glucosyltransferase
hg19_v2_chr8_-_103876965_103877012	0.230392	UGAAAUG	ENST00000337198.5|AZIN1|ENSG00000155096.9|antizyme inhibitor 1
hg19_v2_chr4_+_142557717_142557757	0.229748	UGAAAUG	ENST00000320650.4|IL15|ENSG00000164136.12|interleukin 15 	ENST00000296545.7|IL15|ENSG00000164136.12|interleukin 15
hg19_v2_chr1_+_62902308_62902335	0.2263	UGAAAUG	ENST00000339950.4|USP1|ENSG00000162607.8|ubiquitin specific peptidase 1
hg19_v2_chr20_+_33814457_33814506	0.223862	UGAAAUG	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr6_+_147830063_147830063	0.223503	UGAAAUG	ENST00000367474.1|SAMD5|ENSG00000203727.3|sterile alpha motif domain containing 5
hg19_v2_chr5_+_78908233_78908316	0.223243	UGAAAUG	ENST00000453514.1|PAPD4|ENSG00000164329.9|PAP associated domain containing 4 	ENST00000423041.2|PAPD4|ENSG00000164329.9|PAP associated domain containing 4 	ENST00000504233.1|PAPD4|ENSG00000164329.9|PAP associated domain containing 4 	ENST00000428308.2|PAPD4|ENSG00000164329.9|PAP associated domain containing 4
hg19_v2_chr6_+_116892530_116892592	0.217987	UGAAAUG	ENST00000466444.2|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000368590.5|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000392526.1|RWDD1|ENSG00000111832.8|RWD domain containing 1
hg19_v2_chr11_+_61976137_61976152	0.217873	UGAAAUG	ENST00000244930.4|SCGB2A1|ENSG00000124939.4|secretoglobin, family 2A, member 1
hg19_v2_chr5_-_132299313_132299334	0.215401	UGAAAUG	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr1_+_35734562_35734573	0.211003	UGAAAUG	ENST00000314607.6|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4 	ENST00000373297.2|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4
hg19_v2_chr1_-_108507631_108507809	0.210063	UGAAAUG	ENST00000527011.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000370056.4|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr6_-_99395787_99395878	0.207068	UGAAAUG	ENST00000369244.2|FBXL4|ENSG00000112234.4|F-box and leucine-rich repeat protein 4 	ENST00000229971.1|FBXL4|ENSG00000112234.4|F-box and leucine-rich repeat protein 4
hg19_v2_chr17_+_38278530_38278605	0.204457	UGAAAUG	ENST00000398532.4|MSL1|ENSG00000188895.7|male-specific lethal 1 homolog (Drosophila)
hg19_v2_chr2_-_227664474_227664508	0.202277	UGAAAUG	ENST00000305123.5|IRS1|ENSG00000169047.5|insulin receptor substrate 1
hg19_v2_chr2_-_9770706_9770753	0.200629	UGAAAUG	ENST00000381844.4|YWHAQ|ENSG00000134308.9|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta
hg19_v2_chr14_+_57735614_57735629	0.200104	UGAAAUG	ENST00000261558.3|AP5M1|ENSG00000053770.7|adaptor-related protein complex 5, mu 1 subunit
hg19_v2_chrX_+_16804544_16804613	0.199682	UGAAAUG	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chrX_-_41782249_41782287	0.199206	UGAAAUG	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr1_+_101361626_101361698	0.196914	UGAAAUG	ENST00000370112.4|SLC30A7|ENSG00000162695.7|solute carrier family 30 (zinc transporter), member 7
hg19_v2_chrX_-_15872914_15873054	0.196232	UGAAAUG	ENST00000380291.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000545766.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000421527.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000329235.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit
hg19_v2_chr2_+_26467762_26467817	0.195538	UGAAAUG	ENST00000317799.5|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000405867.3|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000537713.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
hg19_v2_chr19_+_1249869_1249894	0.193432	UGAAAUG	ENST00000591446.2|MIDN|ENSG00000167470.8|midnolin
hg19_v2_chr6_+_74405501_74405515	0.192601	UGAAAUG	ENST00000437994.2|CD109|ENSG00000156535.9|CD109 molecule 	ENST00000422508.2|CD109|ENSG00000156535.9|CD109 molecule
hg19_v2_chr14_-_58894332_58894380	0.19142	UGAAAUG	ENST00000395159.2|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v2_chr1_+_26798955_26799010	0.189275	UGAAAUG	ENST00000361427.5|HMGN2|ENSG00000198830.6|high mobility group nucleosomal binding domain 2
hg19_v2_chr14_-_39639523_39639617	0.188011	UGAAAUG	ENST00000330149.5|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B 	ENST00000554018.1|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B 	ENST00000347691.5|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B
hg19_v2_chr1_+_178062855_178062903	0.187222	UGAAAUG	ENST00000448150.3|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chr10_+_98592009_98592061	0.184525	UGAAAUG	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr3_+_72937182_72937270	0.179713	UGAAAUG	ENST00000389617.4|GXYLT2|ENSG00000172986.8|glucoside xylosyltransferase 2
hg19_v2_chr7_-_35734730_35734777	0.179446	UGAAAUG	ENST00000396081.1|HERPUD2|ENSG00000122557.5|HERPUD family member 2 	ENST00000311350.3|HERPUD2|ENSG00000122557.5|HERPUD family member 2
hg19_v2_chr5_-_95297678_95297775	0.176853	UGAAAUG	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr9_-_117568365_117568406	0.175435	UGAAAUG	ENST00000374045.4|TNFSF15|ENSG00000181634.7|tumor necrosis factor (ligand) superfamily, member 15
hg19_v2_chr4_-_40631859_40631889	0.170009	UGAAAUG	ENST00000295971.7|RBM47|ENSG00000163694.10|RNA binding motif protein 47 	ENST00000319592.4|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr20_-_49575081_49575092	0.168145	UGAAAUG	ENST00000371588.5|DPM1|ENSG00000000419.8|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit 	ENST00000371582.4|DPM1|ENSG00000000419.8|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
hg19_v2_chr4_-_99851766_99851788	0.165796	UGAAAUG	ENST00000450253.2|EIF4E|ENSG00000151247.8|eukaryotic translation initiation factor 4E
hg19_v2_chr14_+_73525144_73525224	0.165658	UGAAAUG	ENST00000261973.7|RBM25|ENSG00000119707.9|RNA binding motif protein 25 	ENST00000540173.1|RBM25|ENSG00000119707.9|RNA binding motif protein 25
hg19_v2_chr15_-_42749711_42749754	0.165295	UGAAAUG	ENST00000565611.1|ZNF106|ENSG00000103994.12|zinc finger protein 106 	ENST00000263805.4|ZNF106|ENSG00000103994.12|zinc finger protein 106 	ENST00000565948.1|ZNF106|ENSG00000103994.12|zinc finger protein 106
hg19_v2_chrX_-_77395186_77395203	0.16509	UGAAAUG	ENST00000341864.5|TAF9B|ENSG00000187325.4|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
hg19_v2_chr3_+_150126101_150126122	0.164381	UGAAAUG	ENST00000361875.3|TSC22D2|ENSG00000196428.8|TSC22 domain family, member 2 	ENST00000361136.2|TSC22D2|ENSG00000196428.8|TSC22 domain family, member 2
hg19_v2_chr15_-_45670924_45670991	0.164118	UGAAAUG	ENST00000396659.3|GATM|ENSG00000171766.11|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg19_v2_chr2_+_69969106_69969243	0.162948	UGAAAUG	ENST00000409920.1|ANXA4|ENSG00000196975.10|annexin A4 	ENST00000394295.4|ANXA4|ENSG00000196975.10|annexin A4 	ENST00000536030.1|ANXA4|ENSG00000196975.10|annexin A4
hg19_v2_chr14_-_74485960_74486035	0.161271	UGAAAUG	ENST00000556242.1|ENTPD5|ENSG00000187097.8|ectonucleoside triphosphate diphosphohydrolase 5 	ENST00000334696.6|ENTPD5|ENSG00000187097.8|ectonucleoside triphosphate diphosphohydrolase 5
hg19_v2_chr7_-_27239703_27239725	0.156378	UGAAAUG	ENST00000222753.4|HOXA13|ENSG00000106031.6|homeobox A13
hg19_v2_chr19_-_41196534_41196568	0.156227	UGAAAUG	ENST00000252891.4|NUMBL|ENSG00000105245.5|numb homolog (Drosophila)-like
hg19_v2_chr11_-_105892937_105893130	0.154316	UGAAAUG	ENST00000301919.4|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000534458.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530108.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530788.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
hg19_v2_chr7_-_141401951_141401985	0.153326	UGAAAUG	ENST00000536163.1|KIAA1147|ENSG00000257093.2|KIAA1147
hg19_v2_chr8_+_75262612_75262622	0.152882	UGAAAUG	ENST00000220822.7|GDAP1|ENSG00000104381.8|ganglioside induced differentiation associated protein 1
hg19_v2_chr21_+_40177143_40177231	0.148584	UGAAAUG	ENST00000360214.3|ETS2|ENSG00000157557.7|v-ets avian erythroblastosis virus E26 oncogene homolog 2
hg19_v2_chr1_-_150208291_150208309	0.147757	UGAAAUG	ENST00000533654.1|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
hg19_v2_chr2_+_28974668_28974729	0.146709	UGAAAUG	ENST00000296122.6|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme 	ENST00000395366.2|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr17_+_57697216_57697235	0.146588	UGAAAUG	ENST00000393043.1|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc) 	ENST00000269122.3|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc)
hg19_v2_chr5_+_145583156_145583180	0.143508	UGAAAUG	ENST00000265271.5|RBM27|ENSG00000091009.6|RNA binding motif protein 27
hg19_v2_chr13_-_22033392_22033510	0.142806	UGAAAUG	ENST00000320220.9|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20 	ENST00000415724.1|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20 	ENST00000422251.1|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20 	ENST00000382466.3|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20 	ENST00000542645.1|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20 	ENST00000400590.3|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20
hg19_v2_chr3_+_152017181_152017229	0.140766	UGAAAUG	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr11_-_76091986_76092038	0.140528	UGAAAUG	ENST00000260045.3|PRKRIR|ENSG00000137492.3|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
hg19_v2_chr12_-_110318263_110318320	0.139715	UGAAAUG	ENST00000318348.4|GLTP|ENSG00000139433.5|glycolipid transfer protein
hg19_v2_chr4_-_71705590_71705662	0.139713	UGAAAUG	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chrX_+_64708615_64708615	0.13897	UGAAAUG	ENST00000338957.4|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B 	ENST00000423889.3|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B
hg19_v2_chr5_+_76506706_76506787	0.137148	UGAAAUG	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chr10_+_62538089_62538244	0.136655	UGAAAUG	ENST00000519078.2|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1 	ENST00000395284.3|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1 	ENST00000316629.4|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1
hg19_v2_chr7_-_107204337_107204485	0.135163	UGAAAUG	ENST00000605888.1|COG5|ENSG00000164597.9|component of oligomeric golgi complex 5 	ENST00000347053.3|COG5|ENSG00000164597.9|component of oligomeric golgi complex 5
hg19_v2_chr12_+_62654119_62654142	0.134837	UGAAAUG	ENST00000353364.3|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000549523.1|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000280377.5|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15
hg19_v2_chr18_-_21977748_21977823	0.130901	UGAAAUG	ENST00000399441.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A 	ENST00000319481.3|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr14_-_31676964_31677017	0.129152	UGAAAUG	ENST00000553700.1|HECTD1|ENSG00000092148.8|HECT domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr3_-_24536253_24536328	0.128244	UGAAAUG	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr12_-_81331697_81331733	0.127672	UGAAAUG	ENST00000552864.1|LIN7A|ENSG00000111052.3|lin-7 homolog A (C. elegans)
hg19_v2_chr11_+_14665263_14665274	0.127537	UGAAAUG	ENST00000282096.4|PDE3B|ENSG00000152270.4|phosphodiesterase 3B, cGMP-inhibited
hg19_v2_chrX_-_106959631_106959775	0.126316	UGAAAUG	ENST00000486554.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372390.4|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr2_-_43453734_43453751	0.12618	UGAAAUG	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr17_+_55333876_55333939	0.125714	UGAAAUG	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr4_+_75858290_75858305	0.124577	UGAAAUG	ENST00000513238.1|PARM1|ENSG00000169116.7|prostate androgen-regulated mucin-like protein 1
hg19_v2_chr9_-_115818951_115819011	0.123472	UGAAAUG	ENST00000553380.1|ZFP37|ENSG00000136866.9|ZFP37 zinc finger protein 	ENST00000374227.3|ZFP37|ENSG00000136866.9|ZFP37 zinc finger protein
hg19_v2_chr14_+_56585048_56585150	0.121882	UGAAAUG	ENST00000267460.4|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chr1_+_87794150_87794172	0.121803	UGAAAUG	ENST00000370544.5|LMO4|ENSG00000143013.8|LIM domain only 4
hg19_v2_chr1_+_64239657_64239724	0.120651	UGAAAUG	ENST00000371080.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1 	ENST00000371079.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1
hg19_v2_chr1_+_24645807_24645819	0.117689	UGAAAUG	ENST00000361548.4|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr1_+_145477060_145477116	0.117381	UGAAAUG	ENST00000369308.3|LIX1L|ENSG00000152022.7|Lix1 homolog (mouse)-like
hg19_v2_chr18_+_22006580_22006614	0.117373	UGAAAUG	ENST00000284202.4|IMPACT|ENSG00000154059.5|impact RWD domain protein
hg19_v2_chr11_+_120894781_120894840	0.1165	UGAAAUG	ENST00000529397.1|TBCEL|ENSG00000154114.8|tubulin folding cofactor E-like 	ENST00000528512.1|TBCEL|ENSG00000154114.8|tubulin folding cofactor E-like 	ENST00000422003.2|TBCEL|ENSG00000154114.8|tubulin folding cofactor E-like
hg19_v2_chr11_-_57417405_57417423	0.115823	UGAAAUG	ENST00000524669.1|YPEL4|ENSG00000166793.6|yippee-like 4 (Drosophila) 	ENST00000300022.3|YPEL4|ENSG00000166793.6|yippee-like 4 (Drosophila)
hg19_v2_chr1_-_166028709_166028709	0.115613	UGAAAUG	ENST00000595430.1|AL626787.1|ENSG00000267884.1|AL626787.1
hg19_v2_chr8_+_94712732_94712739	0.114022	UGAAAUG	ENST00000518322.1|FAM92A1|ENSG00000188343.8|family with sequence similarity 92, member A1
hg19_v2_chr20_-_48099182_48099214	0.113629	UGAAAUG	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr12_+_67663056_67663067	0.112643	UGAAAUG	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr15_-_27018175_27018241	0.11155	UGAAAUG	ENST00000311550.5|GABRB3|ENSG00000166206.9|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg19_v2_chr1_-_182369751_182369777	0.111546	UGAAAUG	ENST00000367565.1|TEDDM1|ENSG00000203730.2|transmembrane epididymal protein 1
hg19_v2_chr4_+_52709229_52709345	0.109859	UGAAAUG	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr3_+_130569429_130569479	0.108706	UGAAAUG	ENST00000505330.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000504381.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000507488.2|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000393221.4|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr14_+_102196739_102196774	0.108532	UGAAAUG	ENST00000556973.1|RP11-796G6.2|ENSG00000258512.1|Uncharacterized protein
hg19_v2_chr11_+_108093839_108093850	0.107882	UGAAAUG	ENST00000452508.2|ATM|ENSG00000149311.13|ataxia telangiectasia mutated
hg19_v2_chr3_-_123603137_123603203	0.107034	UGAAAUG	ENST00000360304.3|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000359169.1|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000346322.5|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000360772.3|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr16_-_56485257_56485287	0.103907	UGAAAUG	ENST00000300291.5|NUDT21|ENSG00000167005.9|nudix (nucleoside diphosphate linked moiety X)-type motif 21
hg19_v2_chr3_-_15374033_15374136	0.103659	UGAAAUG	ENST00000253688.5|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated) 	ENST00000383791.3|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated)
hg19_v2_chr11_-_89956461_89956532	0.102715	UGAAAUG	ENST00000320585.6|CHORDC1|ENSG00000110172.7|cysteine and histidine-rich domain (CHORD) containing 1
hg19_v2_chr2_+_148778570_148778589	0.102648	UGAAAUG	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr5_+_56205081_56205092	0.101338	UGAAAUG	ENST00000285947.2|SETD9|ENSG00000155542.7|SET domain containing 9 	ENST00000541720.1|SETD9|ENSG00000155542.7|SET domain containing 9
hg19_v2_chr7_+_17338239_17338262	0.101142	UGAAAUG	ENST00000242057.4|AHR|ENSG00000106546.8|aryl hydrocarbon receptor
hg19_v2_chr9_+_15553055_15553101	0.100871	UGAAAUG	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr11_+_120195992_120196023	0.100839	UGAAAUG	ENST00000314475.2|TMEM136|ENSG00000181264.4|transmembrane protein 136 	ENST00000529187.1|TMEM136|ENSG00000181264.4|transmembrane protein 136
hg19_v2_chr1_+_112162381_112162431	0.0985582	UGAAAUG	ENST00000433097.1|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000369709.3|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000436150.2|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family
hg19_v2_chr17_-_31404_31427	0.0968405	UGAAAUG	ENST00000343572.7|DOC2B|ENSG00000272636.1|double C2-like domains, beta
hg19_v2_chr11_+_111807863_111807937	0.095924	UGAAAUG	ENST00000440460.2|DIXDC1|ENSG00000150764.9|DIX domain containing 1
hg19_v2_chr12_-_102513843_102513908	0.0951317	UGAAAUG	ENST00000551744.2|NUP37|ENSG00000075188.4|nucleoporin 37kDa 	ENST00000552283.1|NUP37|ENSG00000075188.4|nucleoporin 37kDa
hg19_v2_chr1_+_65210772_65210840	0.0951231	UGAAAUG	ENST00000371072.4|RAVER2|ENSG00000162437.10|ribonucleoprotein, PTB-binding 2 	ENST00000294428.3|RAVER2|ENSG00000162437.10|ribonucleoprotein, PTB-binding 2
hg19_v2_chr11_+_130318869_130318869	0.0949128	UGAAAUG	ENST00000299164.2|ADAMTS15|ENSG00000166106.2|ADAM metallopeptidase with thrombospondin type 1 motif, 15
hg19_v2_chr6_+_111580508_111580575	0.0941851	UGAAAUG	ENST00000368847.4|KIAA1919|ENSG00000173214.5|KIAA1919
hg19_v2_chr19_+_30433110_30433214	0.093999	UGAAAUG	ENST00000542441.2|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone 	ENST00000392271.1|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone
hg19_v2_chr2_-_180129484_180129574	0.0937051	UGAAAUG	ENST00000428443.3|SESTD1|ENSG00000187231.9|SEC14 and spectrin domains 1
hg19_v2_chr5_-_100238956_100238994	0.092618	UGAAAUG	ENST00000231461.5|ST8SIA4|ENSG00000113532.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v2_chr4_+_41937131_41937211	0.0926136	UGAAAUG	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr9_-_13279589_13279629	0.0900294	UGAAAUG	ENST00000319217.7|MPDZ|ENSG00000107186.12|multiple PDZ domain protein
hg19_v2_chr9_-_94186131_94186174	0.0897886	UGAAAUG	ENST00000297689.3|NFIL3|ENSG00000165030.3|nuclear factor, interleukin 3 regulated
hg19_v2_chr2_+_46769798_46769867	0.0891572	UGAAAUG	ENST00000238738.4|RHOQ|ENSG00000119729.6|ras homolog family member Q
hg19_v2_chr7_-_108166505_108166762	0.0886798	UGAAAUG	ENST00000426128.2|PNPLA8|ENSG00000135241.12|patatin-like phospholipase domain containing 8 	ENST00000427008.1|PNPLA8|ENSG00000135241.12|patatin-like phospholipase domain containing 8 	ENST00000388728.5|PNPLA8|ENSG00000135241.12|patatin-like phospholipase domain containing 8 	ENST00000257694.8|PNPLA8|ENSG00000135241.12|patatin-like phospholipase domain containing 8 	ENST00000422087.1|PNPLA8|ENSG00000135241.12|patatin-like phospholipase domain containing 8 	ENST00000453144.1|PNPLA8|ENSG00000135241.12|patatin-like phospholipase domain containing 8 	ENST00000436062.1|PNPLA8|ENSG00000135241.12|patatin-like phospholipase domain containing 8
hg19_v2_chr17_-_16118835_16118867	0.0884007	UGAAAUG	ENST00000582357.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000436828.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000411510.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000268712.3|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1
hg19_v2_chr9_-_123639600_123639627	0.0875382	UGAAAUG	ENST00000373896.3|PHF19|ENSG00000119403.9|PHD finger protein 19
hg19_v2_chr1_-_231560790_231560790	0.0871851	UGAAAUG	ENST00000366641.3|EGLN1|ENSG00000135766.8|egl-9 family hypoxia-inducible factor 1
hg19_v2_chr12_-_65146636_65146651	0.0865465	UGAAAUG	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr3_-_113465065_113465147	0.0860732	UGAAAUG	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr2_+_42795651_42795676	0.0852413	UGAAAUG	ENST00000407270.3|MTA3|ENSG00000057935.9|metastasis associated 1 family, member 3
hg19_v2_chr14_+_62037287_62037314	0.0846173	UGAAAUG	ENST00000556569.1|RP11-47I22.3|ENSG00000232774.3|Uncharacterized protein
hg19_v2_chr12_+_8850471_8850534	0.084472	UGAAAUG	ENST00000535829.1|RIMKLB|ENSG00000166532.11|ribosomal modification protein rimK-like family member B 	ENST00000357529.3|RIMKLB|ENSG00000166532.11|ribosomal modification protein rimK-like family member B
hg19_v2_chr3_+_25469724_25469773	0.0831995	UGAAAUG	ENST00000437042.2|RARB|ENSG00000077092.14|retinoic acid receptor, beta
hg19_v2_chrX_-_102942961_102943011	0.0818373	UGAAAUG	ENST00000434230.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000418819.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000360458.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2
hg19_v2_chr2_-_136743169_136743254	0.0813927	UGAAAUG	ENST00000264161.4|DARS|ENSG00000115866.6|aspartyl-tRNA synthetase
hg19_v2_chr10_+_111967345_111967442	0.0805601	UGAAAUG	ENST00000332674.5|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein 	ENST00000453116.1|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr2_+_120517174_120517207	0.0790233	UGAAAUG	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr1_+_213123915_213123955	0.078593	UGAAAUG	ENST00000366968.4|VASH2|ENSG00000143494.11|vasohibin 2 	ENST00000490792.1|VASH2|ENSG00000143494.11|vasohibin 2
hg19_v2_chr3_+_98451275_98451361	0.0772241	UGAAAUG	ENST00000265261.6|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6 	ENST00000497008.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr15_+_50716576_50716624	0.0771616	UGAAAUG	ENST00000560297.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000307179.4|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000396444.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000433963.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000425032.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8
hg19_v2_chr12_+_120884222_120884380	0.0770596	UGAAAUG	ENST00000551765.1|GATC|ENSG00000257218.1|glutamyl-tRNA(Gln) amidotransferase, subunit C 	ENST00000229384.5|GATC|ENSG00000257218.1|glutamyl-tRNA(Gln) amidotransferase, subunit C
hg19_v2_chr14_-_53019211_53019269	0.0768109	UGAAAUG	ENST00000557374.1|TXNDC16|ENSG00000087301.4|thioredoxin domain containing 16 	ENST00000281741.4|TXNDC16|ENSG00000087301.4|thioredoxin domain containing 16
hg19_v2_chr3_+_133293278_133293492	0.0766072	UGAAAUG	ENST00000508481.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000420115.2|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000504867.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000507408.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000511392.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000515421.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse)
hg19_v2_chr5_+_56469775_56469837	0.0761227	UGAAAUG	ENST00000424459.3|GPBP1|ENSG00000062194.11|GC-rich promoter binding protein 1
hg19_v2_chr17_+_56160768_56160786	0.0756186	UGAAAUG	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr8_+_94767072_94767105	0.0743397	UGAAAUG	ENST00000452276.1|TMEM67|ENSG00000164953.11|transmembrane protein 67 	ENST00000453321.3|TMEM67|ENSG00000164953.11|transmembrane protein 67 	ENST00000498673.1|TMEM67|ENSG00000164953.11|transmembrane protein 67 	ENST00000518319.1|TMEM67|ENSG00000164953.11|transmembrane protein 67
hg19_v2_chr17_-_26941179_26941228	0.0725492	UGAAAUG	ENST00000301037.5|SGK494|ENSG00000167524.10|uncharacterized serine/threonine-protein kinase SgK494  	ENST00000577790.1|RP11-192H23.4|ENSG00000258472.4|Uncharacterized protein  	ENST00000530121.1|SGK494|ENSG00000167524.10|uncharacterized serine/threonine-protein kinase SgK494  	ENST00000531839.1|RP11-192H23.4|ENSG00000258472.4|Uncharacterized protein  	ENST00000534850.1|RP11-192H23.4|ENSG00000258472.4|Uncharacterized protein  	ENST00000525510.1|SGK494|ENSG00000167524.10|uncharacterized serine/threonine-protein kinase SgK494
hg19_v2_chrX_-_119603138_119603220	0.0723211	UGAAAUG	ENST00000200639.4|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000371335.4|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000538785.1|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000434600.2|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2
hg19_v2_chr1_-_86174065_86174134	0.0718308	UGAAAUG	ENST00000370574.3|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6 	ENST00000431532.2|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6
hg19_v2_chr8_+_41386761_41386787	0.0712275	UGAAAUG	ENST00000523277.2|GINS4|ENSG00000147536.7|GINS complex subunit 4 (Sld5 homolog)
hg19_v2_chrY_+_15016725_15016769	0.0712113	UGAAAUG	ENST00000336079.3|DDX3Y|ENSG00000067048.12|DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
hg19_v2_chr20_+_60718785_60718853	0.0694268	UGAAAUG	ENST00000421564.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000450482.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000331758.3|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1
hg19_v2_chr10_+_76586348_76586400	0.0687694	UGAAAUG	ENST00000372724.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000287239.4|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000372714.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B
hg19_v2_chr6_+_71998506_71998522	0.0687004	UGAAAUG	ENST00000370435.4|OGFRL1|ENSG00000119900.7|opioid growth factor receptor-like 1
hg19_v2_chr2_-_179343268_179343338	0.0683001	UGAAAUG	ENST00000424785.2|FKBP7|ENSG00000079150.13|FK506 binding protein 7
hg19_v2_chr2_+_148602058_148602185	0.0682668	UGAAAUG	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr11_+_58346584_58346607	0.0674406	UGAAAUG	ENST00000316059.6|ZFP91|ENSG00000186660.14|ZFP91 zinc finger protein
hg19_v2_chr12_-_111021110_111021142	0.0662353	UGAAAUG	ENST00000354300.3|PPTC7|ENSG00000196850.4|PTC7 protein phosphatase homolog (S. cerevisiae)
hg19_v2_chr15_+_44719394_44719579	0.0643721	UGAAAUG	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr12_+_124118366_124118392	0.0630366	UGAAAUG	ENST00000539994.1|GTF2H3|ENSG00000111358.9|general transcription factor IIH, polypeptide 3, 34kDa 	ENST00000538845.1|GTF2H3|ENSG00000111358.9|general transcription factor IIH, polypeptide 3, 34kDa 	ENST00000228955.7|GTF2H3|ENSG00000111358.9|general transcription factor IIH, polypeptide 3, 34kDa 	ENST00000543341.2|GTF2H3|ENSG00000111358.9|general transcription factor IIH, polypeptide 3, 34kDa 	ENST00000536375.1|GTF2H3|ENSG00000111358.9|general transcription factor IIH, polypeptide 3, 34kDa
hg19_v2_chr5_+_138629417_138629467	0.0627143	UGAAAUG	ENST00000510056.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511249.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000503811.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511378.1|MATR3|ENSG00000015479.13|matrin 3
hg19_v2_chr5_-_124080203_124080258	0.0618264	UGAAAUG	ENST00000504926.1|ZNF608|ENSG00000168916.11|zinc finger protein 608
hg19_v2_chr8_+_67579807_67579887	0.0618237	UGAAAUG	ENST00000519289.1|C8orf44-SGK3|ENSG00000270024.1|C8orf44-SGK3 readthrough 	ENST00000519561.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44 	ENST00000521889.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44
hg19_v2_chr15_+_79165151_79165218	0.0614979	UGAAAUG	ENST00000331268.5|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1
hg19_v2_chr1_+_6845497_6845561	0.0604027	UGAAAUG	ENST00000473578.1|CAMTA1|ENSG00000171735.14|calmodulin binding transcription activator 1 	ENST00000557126.1|CAMTA1|ENSG00000171735.14|calmodulin binding transcription activator 1
hg19_v2_chr7_+_155089486_155089599	0.060351	UGAAAUG	ENST00000340368.4|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000344756.4|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000425172.1|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000342407.5|INSIG1|ENSG00000186480.8|insulin induced gene 1
hg19_v2_chr2_+_175199674_175199688	0.0600036	UGAAAUG	ENST00000394967.2|SP9|ENSG00000217236.1|Sp9 transcription factor
hg19_v2_chr8_-_25315905_25315983	0.0593304	UGAAAUG	ENST00000221200.4|KCTD9|ENSG00000104756.11|potassium channel tetramerization domain containing 9
hg19_v2_chr8_-_41909496_41909512	0.0592896	UGAAAUG	ENST00000265713.2|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000406337.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000396930.3|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000485568.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000426524.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A
hg19_v2_chr4_+_146402925_146402957	0.0586923	UGAAAUG	ENST00000302085.4|SMAD1|ENSG00000170365.5|SMAD family member 1
hg19_v2_chr7_-_91875358_91875480	0.0574556	UGAAAUG	ENST00000458177.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394507.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000340022.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000444960.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing
hg19_v2_chr20_-_5591626_5591677	0.0573212	UGAAAUG	ENST00000379019.4|GPCPD1|ENSG00000125772.8|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg19_v2_chr4_+_155665123_155665158	0.0570054	UGAAAUG	ENST00000336356.3|LRAT|ENSG00000121207.7|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)
hg19_v2_chr9_-_33076652_33076697	0.0564281	UGAAAUG	ENST00000397149.3|SMU1|ENSG00000122692.7|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) 	ENST00000536631.1|SMU1|ENSG00000122692.7|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
hg19_v2_chr6_+_42749759_42749780	0.0563451	UGAAAUG	ENST00000314073.5|GLTSCR1L|ENSG00000112624.8|GLTSCR1-like
hg19_v2_chr3_+_150321068_150321123	0.0560487	UGAAAUG	ENST00000471696.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000477889.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000485923.1|SELT|ENSG00000198843.8|Selenoprotein T
hg19_v2_chr2_-_54087066_54087297	0.0549299	UGAAAUG	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr20_+_31407692_31407709	0.0540549	UGAAAUG	ENST00000375571.5|MAPRE1|ENSG00000101367.8|microtubule-associated protein, RP/EB family, member 1
hg19_v2_chr14_+_60715928_60716007	0.0538603	UGAAAUG	ENST00000395076.4|PPM1A|ENSG00000100614.13|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v2_chr16_-_4166186_4166186	0.0529031	UGAAAUG	ENST00000294016.3|ADCY9|ENSG00000162104.5|adenylate cyclase 9
hg19_v2_chr15_-_43398274_43398318	0.0521674	UGAAAUG	ENST00000382177.2|UBR1|ENSG00000159459.7|ubiquitin protein ligase E3 component n-recognin 1 	ENST00000290650.4|UBR1|ENSG00000159459.7|ubiquitin protein ligase E3 component n-recognin 1
hg19_v2_chr10_-_79686284_79686527	0.0516736	UGAAAUG	ENST00000372391.2|DLG5|ENSG00000151208.12|discs, large homolog 5 (Drosophila) 	ENST00000372388.2|DLG5|ENSG00000151208.12|discs, large homolog 5 (Drosophila)
hg19_v2_chr15_+_77223960_77223994	0.0511879	UGAAAUG	ENST00000394885.3|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain
hg19_v2_chr11_-_9482010_9482185	0.0511626	UGAAAUG	ENST00000596206.1|AC132192.1|ENSG00000268403.1|LOC644656 protein; Uncharacterized protein
hg19_v2_chr13_-_45915221_45915347	0.0509551	UGAAAUG	ENST00000309246.5|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379060.4|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379055.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000527226.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379056.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1
hg19_v2_chr7_+_8008418_8008443	0.0499932	UGAAAUG	ENST00000223145.5|GLCCI1|ENSG00000106415.8|glucocorticoid induced transcript 1
hg19_v2_chr11_+_9406169_9406210	0.0489736	UGAAAUG	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr7_-_72936531_72936602	0.0486685	UGAAAUG	ENST00000339594.4|BAZ1B|ENSG00000009954.6|bromodomain adjacent to zinc finger domain, 1B
hg19_v2_chrX_-_119077695_119077757	0.0467322	UGAAAUG	ENST00000371410.3|NKAP|ENSG00000101882.5|NFKB activating protein
hg19_v2_chr11_-_117186946_117186981	0.0465933	UGAAAUG	ENST00000313005.6|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1 	ENST00000528053.1|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1
hg19_v2_chr12_-_82752565_82752579	0.0460539	UGAAAUG	ENST00000256151.7|CCDC59|ENSG00000133773.7|coiled-coil domain containing 59
hg19_v2_chr6_-_116381918_116381977	0.045645	UGAAAUG	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr12_-_109125285_109125372	0.0455425	UGAAAUG	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chr12_+_62860581_62860629	0.04541	UGAAAUG	ENST00000393632.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393630.3|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000280379.6|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000546600.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552738.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393629.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552115.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae)
hg19_v2_chr1_-_120190396_120190396	0.045125	UGAAAUG	ENST00000421812.2|ZNF697|ENSG00000143067.4|zinc finger protein 697
hg19_v2_chr9_+_107526443_107526477	0.0448449	UGAAAUG	ENST00000374762.3|NIPSNAP3B|ENSG00000165028.7|nipsnap homolog 3B (C. elegans)
hg19_v2_chr7_+_106809406_106809460	0.0444151	UGAAAUG	ENST00000468410.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000478930.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000464009.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000222574.4|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr9_+_125133315_125133359	0.0438101	UGAAAUG	ENST00000223423.4|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 	ENST00000362012.2|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr6_+_146864829_146864881	0.0424434	UGAAAUG	ENST00000367495.3|RAB32|ENSG00000118508.4|RAB32, member RAS oncogene family
hg19_v2_chr9_+_32384617_32384709	0.0423115	UGAAAUG	ENST00000379923.1|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000309951.6|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000541043.1|ACO1|ENSG00000122729.14|aconitase 1, soluble
hg19_v2_chr11_+_34642656_34642682	0.0420596	UGAAAUG	ENST00000257831.3|EHF|ENSG00000135373.8|ets homologous factor 	ENST00000450654.2|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr2_-_174830430_174830563	0.0413269	UGAAAUG	ENST00000310015.6|SP3|ENSG00000172845.9|Sp3 transcription factor 	ENST00000455789.2|SP3|ENSG00000172845.9|Sp3 transcription factor
hg19_v2_chr17_+_28804380_28804460	0.0403523	UGAAAUG	ENST00000225724.5|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000451249.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000467337.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000581721.1|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000414833.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1
hg19_v2_chr1_+_113161778_113161820	0.0400635	UGAAAUG	ENST00000263168.3|CAPZA1|ENSG00000116489.8|capping protein (actin filament) muscle Z-line, alpha 1
hg19_v2_chr22_+_42372931_42372947	0.0400518	UGAAAUG	ENST00000328414.8|SEPT3|ENSG00000100167.15|septin 3 	ENST00000396425.3|SEPT3|ENSG00000100167.15|septin 3
hg19_v2_chr18_-_46987000_46987172	0.0399411	UGAAAUG	ENST00000442713.2|DYM|ENSG00000141627.9|dymeclin 	ENST00000269445.6|DYM|ENSG00000141627.9|dymeclin
hg19_v2_chr7_+_66386204_66386249	0.0399151	UGAAAUG	ENST00000341567.4|TMEM248|ENSG00000106609.12|transmembrane protein 248 	ENST00000607045.1|TMEM248|ENSG00000106609.12|transmembrane protein 248
hg19_v2_chr11_-_18656028_18656040	0.0395386	UGAAAUG	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr2_+_223725652_223725705	0.0388027	UGAAAUG	ENST00000357430.3|ACSL3|ENSG00000123983.9|acyl-CoA synthetase long-chain family member 3 	ENST00000392066.3|ACSL3|ENSG00000123983.9|acyl-CoA synthetase long-chain family member 3
hg19_v2_chr19_-_40030861_40030873	0.0386093	UGAAAUG	ENST00000390658.2|EID2|ENSG00000176396.9|EP300 interacting inhibitor of differentiation 2
hg19_v2_chr19_-_2456922_2456994	0.0386052	UGAAAUG	ENST00000582871.1|LMNB2|ENSG00000176619.6|lamin B2 	ENST00000325327.3|LMNB2|ENSG00000176619.6|lamin B2
hg19_v2_chr8_-_81083731_81083813	0.0382498	UGAAAUG	ENST00000379096.5|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr18_+_9913977_9914088	0.0376837	UGAAAUG	ENST00000400000.2|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 	ENST00000340541.4|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
hg19_v2_chr10_-_735553_735683	0.037211	UGAAAUG	ENST00000280886.6|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila) 	ENST00000423550.1|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v2_chr14_+_58666824_58666902	0.0363187	UGAAAUG	ENST00000254286.4|ACTR10|ENSG00000131966.9|actin-related protein 10 homolog (S. cerevisiae)
hg19_v2_chr2_+_231577532_231577639	0.0361061	UGAAAUG	ENST00000258418.5|CAB39|ENSG00000135932.6|calcium binding protein 39
hg19_v2_chr11_-_46722117_46722183	0.0349495	UGAAAUG	ENST00000311956.4|ARHGAP1|ENSG00000175220.7|Rho GTPase activating protein 1
hg19_v2_chr14_+_23775971_23776000	0.0348463	UGAAAUG	ENST00000250405.5|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr17_+_45727204_45727220	0.0347906	UGAAAUG	ENST00000290158.4|KPNB1|ENSG00000108424.5|karyopherin (importin) beta 1
hg19_v2_chr18_-_5296001_5296045	0.0342192	UGAAAUG	ENST00000357006.4|ZBTB14|ENSG00000198081.6|zinc finger and BTB domain containing 14
hg19_v2_chr9_-_98279241_98279339	0.033805	UGAAAUG	ENST00000437951.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000375274.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000430669.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000468211.2|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr1_+_43291220_43291239	0.0331575	UGAAAUG	ENST00000372514.3|ERMAP|ENSG00000164010.9|erythroblast membrane-associated protein (Scianna blood group)
hg19_v2_chr10_-_95462265_95462378	0.0314023	UGAAAUG	ENST00000536233.1|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 	ENST00000359204.4|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 	ENST00000371430.2|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 	ENST00000394100.2|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
hg19_v2_chr20_+_39657454_39657470	0.0313426	UGAAAUG	ENST00000361337.2|TOP1|ENSG00000198900.5|topoisomerase (DNA) I
hg19_v2_chr6_+_56954867_56954882	0.0312704	UGAAAUG	ENST00000370708.4|ZNF451|ENSG00000112200.12|zinc finger protein 451 	ENST00000370702.1|ZNF451|ENSG00000112200.12|zinc finger protein 451
hg19_v2_chr17_+_27920486_27920525	0.0311827	UGAAAUG	ENST00000394859.3|ANKRD13B|ENSG00000198720.8|ankyrin repeat domain 13B
hg19_v2_chr11_+_13299186_13299432	0.0310733	UGAAAUG	ENST00000527998.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000396441.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000533520.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529825.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389707.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000401424.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529388.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000530357.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403290.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000361003.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389708.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403510.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000482049.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like
hg19_v2_chr4_+_123747834_123747863	0.0301074	UGAAAUG	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr16_-_53737795_53737850	0.0299321	UGAAAUG	ENST00000262135.4|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000564374.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000566096.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like
hg19_v2_chr5_-_39425068_39425098	0.0292248	UGAAAUG	ENST00000515700.1|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 	ENST00000339788.6|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr3_-_171178157_171178225	0.028942	UGAAAUG	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr17_+_30264014_30264086	0.028934	UGAAAUG	ENST00000322652.5|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit 	ENST00000580398.1|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit
hg19_v2_chr6_+_107811162_107811196	0.0289154	UGAAAUG	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chr5_-_59189545_59189625	0.0284097	UGAAAUG	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr1_-_31538517_31538632	0.0274023	UGAAAUG	ENST00000440538.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000423018.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000424085.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000426105.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000257075.5|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373747.3|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000525843.1|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373742.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1
hg19_v2_chr3_+_142720366_142720475	0.0272036	UGAAAUG	ENST00000493782.1|U2SURP|ENSG00000163714.13|U2 snRNP-associated SURP domain containing 	ENST00000397933.2|U2SURP|ENSG00000163714.13|U2 snRNP-associated SURP domain containing 	ENST00000473835.2|U2SURP|ENSG00000163714.13|U2 snRNP-associated SURP domain containing 	ENST00000493598.2|U2SURP|ENSG00000163714.13|U2 snRNP-associated SURP domain containing
hg19_v2_chr1_-_38019878_38019905	0.0270932	UGAAAUG	ENST00000296215.6|SNIP1|ENSG00000163877.9|Smad nuclear interacting protein 1
hg19_v2_chr10_-_27443155_27443288	0.0270819	UGAAAUG	ENST00000427324.1|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase 	ENST00000326799.3|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase
hg19_v2_chr15_+_40987327_40987397	0.0262375	UGAAAUG	ENST00000423169.2|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000267868.3|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000557850.1|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000532743.1|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000382643.3|RAD51|ENSG00000051180.12|RAD51 recombinase
hg19_v2_chr16_+_67596310_67596353	0.0258146	UGAAAUG	ENST00000264010.4|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein) 	ENST00000401394.1|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein)
hg19_v2_chr3_+_38495333_38495422	0.0257351	UGAAAUG	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr3_-_141868357_141868393	0.0253807	UGAAAUG	ENST00000489671.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000475734.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000467072.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000499676.2|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr15_-_56535464_56535521	0.025266	UGAAAUG	ENST00000559447.2|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000422057.1|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000317318.6|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000423270.1|RFX7|ENSG00000181827.10|regulatory factor X, 7
hg19_v2_chr1_-_85040090_85040168	0.0243091	UGAAAUG	ENST00000370630.5|CTBS|ENSG00000117151.8|chitobiase, di-N-acetyl-
hg19_v2_chr4_-_89744457_89744512	0.0228319	UGAAAUG	ENST00000395002.2|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr21_+_34915337_34915397	0.0215931	UGAAAUG	ENST00000290239.6|SON|ENSG00000159140.13|SON DNA binding protein 	ENST00000381692.2|SON|ENSG00000159140.13|SON DNA binding protein 	ENST00000300278.4|SON|ENSG00000159140.13|SON DNA binding protein 	ENST00000381679.4|SON|ENSG00000159140.13|SON DNA binding protein
hg19_v2_chr6_-_57087042_57087128	0.0211608	UGAAAUG	ENST00000317483.3|RAB23|ENSG00000112210.7|RAB23, member RAS oncogene family
hg19_v2_chr1_-_23670817_23670829	0.0211168	UGAAAUG	ENST00000478691.1|HNRNPR|ENSG00000125944.14|heterogeneous nuclear ribonucleoprotein R
hg19_v2_chr3_+_196295482_196295559	0.0208421	UGAAAUG	ENST00000440469.1|FBXO45|ENSG00000174013.7|F-box protein 45 	ENST00000311630.6|FBXO45|ENSG00000174013.7|F-box protein 45
hg19_v2_chr2_-_197036289_197036314	0.0207346	UGAAAUG	ENST00000263955.4|STK17B|ENSG00000081320.6|serine/threonine kinase 17b
hg19_v2_chr11_-_10562710_10562782	0.0200001	UGAAAUG	ENST00000528665.1|RNF141|ENSG00000110315.2|ring finger protein 141 	ENST00000265981.2|RNF141|ENSG00000110315.2|ring finger protein 141
hg19_v2_chr14_-_75643296_75643341	0.0199673	UGAAAUG	ENST00000303575.4|TMED10|ENSG00000170348.4|transmembrane emp24-like trafficking protein 10 (yeast)
hg19_v2_chr9_-_27529726_27529827	0.0197158	UGAAAUG	ENST00000262244.5|MOB3B|ENSG00000120162.9|MOB kinase activator 3B
hg19_v2_chr6_+_167412665_167412698	0.0195839	UGAAAUG	ENST00000366847.4|FGFR1OP|ENSG00000213066.7|FGFR1 oncogene partner
hg19_v2_chr6_+_157099036_157099086	0.0189818	UGAAAUG	ENST00000350026.5|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000346085.5|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000367148.1|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000275248.4|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like)
hg19_v2_chr3_+_28283069_28283168	0.0189329	UGAAAUG	ENST00000466830.1|CMC1|ENSG00000187118.8|C-x(9)-C motif containing 1 	ENST00000423894.1|CMC1|ENSG00000187118.8|C-x(9)-C motif containing 1
hg19_v2_chr17_+_30677136_30677205	0.0187789	UGAAAUG	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr11_-_33722286_33722347	0.0185934	UGAAAUG	ENST00000451594.2|C11orf91|ENSG00000205177.5|chromosome 11 open reading frame 91 	ENST00000379011.4|C11orf91|ENSG00000205177.5|chromosome 11 open reading frame 91
hg19_v2_chr11_-_130298888_130298888	0.0184902	UGAAAUG	ENST00000257359.6|ADAMTS8|ENSG00000134917.9|ADAM metallopeptidase with thrombospondin type 1 motif, 8
hg19_v2_chr4_+_144106080_144106144	0.0170441	UGAAAUG	ENST00000307017.4|USP38|ENSG00000170185.5|ubiquitin specific peptidase 38
hg19_v2_chr6_+_138483058_138483159	0.0165951	UGAAAUG	ENST00000251691.4|KIAA1244|ENSG00000112379.8|KIAA1244
hg19_v2_chr6_-_88411911_88411928	0.0159057	UGAAAUG	ENST00000257787.5|AKIRIN2|ENSG00000135334.8|akirin 2
hg19_v2_chr3_-_125094093_125094198	0.015457	UGAAAUG	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr2_-_175351744_175351828	0.0152877	UGAAAUG	ENST00000295500.4|GPR155|ENSG00000163328.9|G protein-coupled receptor 155 	ENST00000392552.2|GPR155|ENSG00000163328.9|G protein-coupled receptor 155 	ENST00000392551.2|GPR155|ENSG00000163328.9|G protein-coupled receptor 155
hg19_v2_chr4_+_148402069_148402099	0.0148412	UGAAAUG	ENST00000358556.4|EDNRA|ENSG00000151617.11|endothelin receptor type A 	ENST00000339690.5|EDNRA|ENSG00000151617.11|endothelin receptor type A 	ENST00000511804.1|EDNRA|ENSG00000151617.11|endothelin receptor type A 	ENST00000324300.5|EDNRA|ENSG00000151617.11|endothelin receptor type A
hg19_v2_chr15_+_85923856_85923987	0.014548	UGAAAUG	ENST00000560302.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000394518.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000361243.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000560256.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr4_+_147096837_147096912	0.0144552	UGAAAUG	ENST00000296581.5|LSM6|ENSG00000164167.5|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000502781.1|LSM6|ENSG00000164167.5|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr15_+_92396920_92396987	0.0137705	UGAAAUG	ENST00000318445.6|SLCO3A1|ENSG00000176463.9|solute carrier organic anion transporter family, member 3A1
hg19_v2_chr2_+_112895939_112896160	0.0136312	UGAAAUG	ENST00000331203.2|FBLN7|ENSG00000144152.8|fibulin 7 	ENST00000409903.1|FBLN7|ENSG00000144152.8|fibulin 7 	ENST00000409667.3|FBLN7|ENSG00000144152.8|fibulin 7 	ENST00000409450.3|FBLN7|ENSG00000144152.8|fibulin 7
hg19_v2_chr20_+_3869423_3869486	0.0135849	UGAAAUG	ENST00000497424.1|PANK2|ENSG00000125779.17|pantothenate kinase 2
hg19_v2_chr1_+_224301787_224301836	0.0132435	UGAAAUG	ENST00000366862.5|FBXO28|ENSG00000143756.7|F-box protein 28 	ENST00000424254.2|FBXO28|ENSG00000143756.7|F-box protein 28
hg19_v2_chr2_+_46926048_46926095	0.0124416	UGAAAUG	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr13_-_25746416_25746433	0.0122662	UGAAAUG	ENST00000515384.1|AMER2|ENSG00000165566.11|APC membrane recruitment protein 2 	ENST00000357816.2|AMER2|ENSG00000165566.11|APC membrane recruitment protein 2
hg19_v2_chr3_-_52713729_52713784	0.0122312	UGAAAUG	ENST00000296302.7|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000356770.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000337303.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409057.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000410007.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409114.3|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409767.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000423351.1|PBRM1|ENSG00000163939.14|polybromo 1
hg19_v2_chr16_+_11762270_11762344	0.011759	UGAAAUG	ENST00000329565.5|SNN|ENSG00000184602.5|stannin
hg19_v2_chr16_-_87525651_87525651	0.0112193	UGAAAUG	ENST00000268616.4|ZCCHC14|ENSG00000140948.7|zinc finger, CCHC domain containing 14
hg19_v2_chr10_-_91295304_91295329	0.0112102	UGAAAUG	ENST00000341233.4|SLC16A12|ENSG00000152779.12|solute carrier family 16, member 12 	ENST00000371790.4|SLC16A12|ENSG00000152779.12|solute carrier family 16, member 12
hg19_v2_chr1_+_86046433_86046453	0.0108049	UGAAAUG	ENST00000451137.2|CYR61|ENSG00000142871.11|cysteine-rich, angiogenic inducer, 61
hg19_v2_chr6_+_105404899_105404931	0.0107361	UGAAAUG	ENST00000345080.4|LIN28B|ENSG00000187772.6|lin-28 homolog B (C. elegans)
hg19_v2_chr17_-_18266797_18266817	0.0105837	UGAAAUG	ENST00000316694.3|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble) 	ENST00000539052.1|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble)
hg19_v2_chr12_+_72233487_72233563	0.0104338	UGAAAUG	ENST00000482439.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000550746.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000491063.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000319106.8|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000485960.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000393309.3|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15
hg19_v2_chr1_+_112938803_112938860	0.010084	UGAAAUG	ENST00000271277.6|CTTNBP2NL|ENSG00000143079.10|CTTNBP2 N-terminal like
hg19_v2_chr5_+_56111361_56111403	0.00967532	UGAAAUG	ENST00000399503.3|MAP3K1|ENSG00000095015.5|mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
hg19_v2_chr11_+_122526383_122526406	0.00931892	UGAAAUG	ENST00000284273.5|UBASH3B|ENSG00000154127.5|ubiquitin associated and SH3 domain containing B
hg19_v2_chr13_-_21476900_21476949	0.00887582	UGAAAUG	ENST00000400602.2|XPO4|ENSG00000132953.12|exportin 4 	ENST00000255305.6|XPO4|ENSG00000132953.12|exportin 4
hg19_v2_chrX_-_48980098_48980151	0.00677527	UGAAAUG	ENST00000156109.5|GPKOW|ENSG00000068394.9|G patch domain and KOW motifs
hg19_v2_chr4_+_113152881_113152912	0.00662896	UGAAAUG	ENST00000274000.5|AP1AR|ENSG00000138660.7|adaptor-related protein complex 1 associated regulatory protein
hg19_v2_chr15_+_59063478_59063561	0.00557373	UGAAAUG	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr17_+_58677539_58677610	0.0054758	UGAAAUG	ENST00000305921.3|PPM1D|ENSG00000170836.7|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v2_chr17_+_4710391_4710500	0.00461837	UGAAAUG	ENST00000263088.6|PLD2|ENSG00000129219.9|phospholipase D2 	ENST00000572940.1|PLD2|ENSG00000129219.9|phospholipase D2
hg19_v2_chr5_+_65440032_65440099	0.0036783	UGAAAUG	ENST00000334121.6|SREK1|ENSG00000153914.11|splicing regulatory glutamine/lysine-rich protein 1
hg19_v2_chr12_+_53774423_53774658	0.00301993	UGAAAUG	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
hg19_v2_chr6_+_43737939_43737956	0.00207106	UGAAAUG	ENST00000372067.3|VEGFA|ENSG00000112715.16|vascular endothelial growth factor A
hg19_v2_chr11_-_118661828_118661886	0.00203327	UGAAAUG	ENST00000264018.4|DDX6|ENSG00000110367.7|DEAD (Asp-Glu-Ala-Asp) box helicase 6
hg19_v2_chr12_+_27485823_27485868	0.00188518	UGAAAUG	ENST00000395901.2|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2 	ENST00000546179.1|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2
hg19_v2_chr9_-_112083229_112083348	0.00173209	UGAAAUG	ENST00000374566.3|EPB41L4B|ENSG00000095203.10|erythrocyte membrane protein band 4.1 like 4B 	ENST00000374557.4|EPB41L4B|ENSG00000095203.10|erythrocyte membrane protein band 4.1 like 4B
hg19_v2_chr6_-_75915757_75915775	0.00166297	UGAAAUG	ENST00000322507.8|COL12A1|ENSG00000111799.16|collagen, type XII, alpha 1
hg19_v2_chr15_+_27111510_27111644	0.00150756	UGAAAUG	ENST00000335625.5|GABRA5|ENSG00000186297.7|gamma-aminobutyric acid (GABA) A receptor, alpha 5
hg19_v2_chr14_-_27066636_27066701	0.00128651	UGAAAUG	ENST00000267422.7|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000344429.5|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000574031.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000465357.2|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000547619.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1
hg19_v2_chr6_+_13615554_13615601	0.00128473	UGAAAUG	ENST00000451315.2|NOL7|ENSG00000225921.2|nucleolar protein 7, 27kDa
hg19_v2_chr2_+_86947296_86947434	0.000741281	UGAAAUG	ENST00000283632.4|RMND5A|ENSG00000153561.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v2_chr8_-_144923112_144923168	0.000718756	UGAAAUG	ENST00000442628.2|NRBP2|ENSG00000185189.11|nuclear receptor binding protein 2
hg19_v2_chr11_-_10315741_10315773	0.000564616	UGAAAUG	ENST00000256190.8|SBF2|ENSG00000133812.10|SET binding factor 2
hg19_v2_chr1_+_14925173_14925213	0.000381536	UGAAAUG	ENST00000376030.2|KAZN|ENSG00000189337.11|kazrin, periplakin interacting protein 	ENST00000503743.1|KAZN|ENSG00000189337.11|kazrin, periplakin interacting protein 	ENST00000422387.2|KAZN|ENSG00000189337.11|kazrin, periplakin interacting protein
hg19_v2_chr6_-_52441713_52441784	0.000310737	UGAAAUG	ENST00000182527.3|TRAM2|ENSG00000065308.4|translocation associated membrane protein 2
hg19_v2_chr11_-_3013603_3013621	0.000110301	UGAAAUG	ENST00000380542.4|NAP1L4|ENSG00000205531.8|nucleosome assembly protein 1-like 4 	ENST00000526115.1|NAP1L4|ENSG00000205531.8|nucleosome assembly protein 1-like 4
