hg19_v2_chr5_+_162864575_162864620	1.14118	UCACAUU	ENST00000512163.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000393929.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000340828.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511683.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510097.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511490.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510664.1|CCNG1|ENSG00000113328.14|cyclin G1
hg19_v2_chr4_-_78740511_78740544	1.05206	UCACAUU	ENST00000504123.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000264903.4|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000515441.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like
hg19_v2_chr6_-_39197226_39197258	0.697877	UCACAUU	ENST00000359534.3|KCNK5|ENSG00000164626.8|potassium channel, subfamily K, member 5
hg19_v2_chr11_-_76091986_76092038	0.637954	UCACAUU	ENST00000260045.3|PRKRIR|ENSG00000137492.3|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
hg19_v2_chr13_+_73302047_73302073	0.604714	UCACAUU	ENST00000377814.2|BORA|ENSG00000136122.11|bora, aurora kinase A activator 	ENST00000377815.3|BORA|ENSG00000136122.11|bora, aurora kinase A activator 	ENST00000390667.5|BORA|ENSG00000136122.11|bora, aurora kinase A activator
hg19_v2_chr13_+_98605902_98605968	0.585173	UCACAUU	ENST00000460070.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481455.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000261574.5|IPO5|ENSG00000065150.14|importin 5 	ENST00000493281.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000463157.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000471898.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000489058.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481689.1|IPO5|ENSG00000065150.14|importin 5
hg19_v2_chrX_+_16804544_16804613	0.550591	UCACAUU	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr3_-_161090660_161090673	0.532244	UCACAUU	ENST00000359175.4|SPTSSB|ENSG00000196542.4|serine palmitoyltransferase, small subunit B
hg19_v2_chr12_+_20522179_20522203	0.518818	UCACAUU	ENST00000359062.3|PDE3A|ENSG00000172572.6|phosphodiesterase 3A, cGMP-inhibited
hg19_v2_chr6_-_136871957_136872006	0.501978	UCACAUU	ENST00000354570.3|MAP7|ENSG00000135525.14|microtubule-associated protein 7
hg19_v2_chr2_+_159313452_159313624	0.500969	UCACAUU	ENST00000389757.3|PKP4|ENSG00000144283.17|plakophilin 4 	ENST00000389759.3|PKP4|ENSG00000144283.17|plakophilin 4
hg19_v2_chr3_+_187930719_187930729	0.489745	UCACAUU	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr11_+_34073195_34073266	0.482763	UCACAUU	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr9_+_33817461_33817565	0.478039	UCACAUU	ENST00000263228.3|UBE2R2|ENSG00000107341.4|ubiquitin-conjugating enzyme E2R 2
hg19_v2_chr5_+_82767284_82767310	0.475661	UCACAUU	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr5_-_73937244_73937274	0.421147	UCACAUU	ENST00000302351.4|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000510316.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000508331.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain)
hg19_v2_chr13_+_80055284_80055295	0.409245	UCACAUU	ENST00000218652.7|NDFIP2|ENSG00000102471.9|Nedd4 family interacting protein 2
hg19_v2_chr8_-_103876965_103877012	0.400494	UCACAUU	ENST00000337198.5|AZIN1|ENSG00000155096.9|antizyme inhibitor 1
hg19_v2_chrX_-_19140677_19140760	0.390177	UCACAUU	ENST00000357544.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379869.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000360279.4|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379873.2|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379878.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000354791.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379876.1|GPR64|ENSG00000173698.13|G protein-coupled receptor 64
hg19_v2_chr12_-_46662772_46662835	0.38539	UCACAUU	ENST00000549049.1|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1 	ENST00000439706.1|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1 	ENST00000398637.5|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1
hg19_v2_chr10_+_89622870_89622870	0.383103	UCACAUU	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr6_+_87865262_87865339	0.378971	UCACAUU	ENST00000369577.3|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000518845.1|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000339907.4|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000496806.2|ZNF292|ENSG00000188994.8|zinc finger protein 292
hg19_v2_chr3_+_31574189_31574282	0.374912	UCACAUU	ENST00000295770.2|STT3B|ENSG00000163527.5|STT3B, subunit of the oligosaccharyltransferase complex (catalytic)
hg19_v2_chr10_+_93558069_93558154	0.372511	UCACAUU	ENST00000371627.4|TNKS2|ENSG00000107854.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v2_chr5_+_40679584_40679600	0.371777	UCACAUU	ENST00000302472.3|PTGER4|ENSG00000171522.5|prostaglandin E receptor 4 (subtype EP4)
hg19_v2_chr15_-_37390482_37390572	0.369979	UCACAUU	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr2_-_228028829_228028858	0.369541	UCACAUU	ENST00000396625.3|COL4A4|ENSG00000081052.10|collagen, type IV, alpha 4 	ENST00000329662.7|COL4A4|ENSG00000081052.10|collagen, type IV, alpha 4
hg19_v2_chr11_-_96076334_96076419	0.366448	UCACAUU	ENST00000524717.1|MAML2|ENSG00000184384.9|mastermind-like 2 (Drosophila)
hg19_v2_chr1_+_154377669_154377699	0.358	UCACAUU	ENST00000368485.3|IL6R|ENSG00000160712.8|interleukin 6 receptor 	ENST00000344086.4|IL6R|ENSG00000160712.8|interleukin 6 receptor
hg19_v2_chr10_+_121652204_121652286	0.354308	UCACAUU	ENST00000369075.3|SEC23IP|ENSG00000107651.8|SEC23 interacting protein 	ENST00000543134.1|SEC23IP|ENSG00000107651.8|SEC23 interacting protein
hg19_v2_chr1_+_24286287_24286326	0.353988	UCACAUU	ENST00000334351.7|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2 	ENST00000374468.1|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2
hg19_v2_chr4_+_155665123_155665158	0.342069	UCACAUU	ENST00000336356.3|LRAT|ENSG00000121207.7|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)
hg19_v2_chr5_+_127419449_127419540	0.340647	UCACAUU	ENST00000262461.2|SLC12A2|ENSG00000064651.9|solute carrier family 12 (sodium/potassium/chloride transporter), member 2 	ENST00000343225.4|SLC12A2|ENSG00000064651.9|solute carrier family 12 (sodium/potassium/chloride transporter), member 2
hg19_v2_chr13_-_100624012_100624163	0.336915	UCACAUU	ENST00000267294.4|ZIC5|ENSG00000139800.8|Zic family member 5
hg19_v2_chr13_+_108921977_108922082	0.330388	UCACAUU	ENST00000430559.1|TNFSF13B|ENSG00000102524.7|tumor necrosis factor (ligand) superfamily, member 13b 	ENST00000375887.4|TNFSF13B|ENSG00000102524.7|tumor necrosis factor (ligand) superfamily, member 13b
hg19_v2_chr4_+_15004165_15004298	0.325807	UCACAUU	ENST00000538197.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000541112.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000442003.2|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2
hg19_v2_chr17_-_46657473_46657473	0.325158	UCACAUU	ENST00000332503.5|HOXB4|ENSG00000182742.5|homeobox B4
hg19_v2_chr3_-_182698381_182698431	0.319441	UCACAUU	ENST00000292782.4|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr1_+_198126093_198126207	0.317811	UCACAUU	ENST00000367385.4|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000442588.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000538004.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7
hg19_v2_chr1_+_93913713_93913839	0.316783	UCACAUU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr8_-_91658303_91658327	0.31529	UCACAUU	ENST00000458549.2|TMEM64|ENSG00000180694.9|transmembrane protein 64
hg19_v2_chr4_-_140098339_140098392	0.314017	UCACAUU	ENST00000394235.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr4_-_141677267_141677291	0.311183	UCACAUU	ENST00000442267.2|TBC1D9|ENSG00000109436.7|TBC1 domain family, member 9 (with GRAM domain)
hg19_v2_chr5_-_41510656_41510713	0.308552	UCACAUU	ENST00000377801.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chr2_+_148778570_148778589	0.307421	UCACAUU	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr16_+_2587998_2588011	0.303611	UCACAUU	ENST00000441549.3|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1 	ENST00000268673.7|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1
hg19_v2_chr4_-_76598296_76598318	0.298536	UCACAUU	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr12_-_88974236_88974256	0.297792	UCACAUU	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chr1_+_26798955_26799010	0.296337	UCACAUU	ENST00000361427.5|HMGN2|ENSG00000198830.6|high mobility group nucleosomal binding domain 2
hg19_v2_chr6_-_166755995_166756091	0.292117	UCACAUU	ENST00000361731.3|SFT2D1|ENSG00000198818.5|SFT2 domain containing 1
hg19_v2_chr6_+_119215308_119215391	0.288381	UCACAUU	ENST00000229595.5|ASF1A|ENSG00000111875.7|anti-silencing function 1A histone chaperone
hg19_v2_chr3_+_30648066_30648167	0.28729	UCACAUU	ENST00000359013.4|TGFBR2|ENSG00000163513.13|transforming growth factor, beta receptor II (70/80kDa)
hg19_v2_chr2_+_26915584_26915634	0.286698	UCACAUU	ENST00000302909.3|KCNK3|ENSG00000171303.5|potassium channel, subfamily K, member 3
hg19_v2_chr10_-_99094458_99094500	0.284934	UCACAUU	ENST00000371019.2|FRAT2|ENSG00000181274.5|frequently rearranged in advanced T-cell lymphomas 2
hg19_v2_chr1_-_92351769_92351787	0.284895	UCACAUU	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr7_+_38217818_38217882	0.280641	UCACAUU	ENST00000009041.7|STARD3NL|ENSG00000010270.9|STARD3 N-terminal like 	ENST00000544203.1|STARD3NL|ENSG00000010270.9|STARD3 N-terminal like 	ENST00000434197.1|STARD3NL|ENSG00000010270.9|STARD3 N-terminal like
hg19_v2_chr15_+_52043758_52043809	0.278319	UCACAUU	ENST00000249700.4|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal) 	ENST00000539962.2|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal)
hg19_v2_chr4_+_159131346_159131401	0.27696	UCACAUU	ENST00000508243.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000296529.6|TMEM144|ENSG00000164124.6|transmembrane protein 144
hg19_v2_chr9_+_91003271_91003386	0.274932	UCACAUU	ENST00000375859.3|SPIN1|ENSG00000106723.12|spindlin 1 	ENST00000541629.1|SPIN1|ENSG00000106723.12|spindlin 1
hg19_v2_chr1_+_28099683_28099694	0.273621	UCACAUU	ENST00000373943.4|STX12|ENSG00000117758.9|syntaxin 12
hg19_v2_chr14_+_39735411_39735502	0.271999	UCACAUU	ENST00000603904.1|RP11-407N17.3|ENSG00000258941.2|cTAGE family member 5 isoform 4
hg19_v2_chr8_+_76452097_76452126	0.270504	UCACAUU	ENST00000396423.2|HNF4G|ENSG00000164749.7|hepatocyte nuclear factor 4, gamma
hg19_v2_chr10_+_60094735_60094749	0.268313	UCACAUU	ENST00000373910.4|UBE2D1|ENSG00000072401.10|ubiquitin-conjugating enzyme E2D 1
hg19_v2_chr1_-_114355083_114355123	0.26379	UCACAUU	ENST00000261441.5|RSBN1|ENSG00000081019.9|round spermatid basic protein 1
hg19_v2_chr10_+_93683519_93683594	0.262164	UCACAUU	ENST00000265990.6|BTAF1|ENSG00000095564.9|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
hg19_v2_chr4_+_38665810_38665827	0.261576	UCACAUU	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr3_-_28390581_28390618	0.260339	UCACAUU	ENST00000479665.1|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr7_-_37956409_37956517	0.260243	UCACAUU	ENST00000436072.2|SFRP4|ENSG00000106483.7|secreted frizzled-related protein 4
hg19_v2_chr9_+_101569944_101569981	0.259899	UCACAUU	ENST00000375011.3|GALNT12|ENSG00000119514.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)
hg19_v2_chr14_-_64010046_64010107	0.258385	UCACAUU	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr3_-_98620500_98620547	0.257018	UCACAUU	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr10_+_90750378_90750444	0.256973	UCACAUU	ENST00000355740.2|FAS|ENSG00000026103.15|Fas cell surface death receptor 	ENST00000352159.4|FAS|ENSG00000026103.15|Fas cell surface death receptor
hg19_v2_chr14_-_53162361_53162513	0.256973	UCACAUU	ENST00000395686.3|ERO1L|ENSG00000197930.8|ERO1-like (S. cerevisiae)
hg19_v2_chr2_-_37193606_37193633	0.251375	UCACAUU	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr7_+_27779714_27779819	0.250417	UCACAUU	ENST00000265393.6|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1 	ENST00000409980.1|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1 	ENST00000433216.2|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1 	ENST00000396319.2|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v2_chr4_-_53525406_53525502	0.248462	UCACAUU	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr13_-_79233314_79233331	0.246591	UCACAUU	ENST00000282003.6|RNF219|ENSG00000152193.7|ring finger protein 219
hg19_v2_chr12_-_100536608_100536667	0.245838	UCACAUU	ENST00000356828.3|UHRF1BP1L|ENSG00000111647.8|UHRF1 binding protein 1-like 	ENST00000279907.7|UHRF1BP1L|ENSG00000111647.8|UHRF1 binding protein 1-like
hg19_v2_chr9_+_100395891_100395922	0.245089	UCACAUU	ENST00000375147.3|NCBP1|ENSG00000136937.8|nuclear cap binding protein subunit 1, 80kDa
hg19_v2_chr4_-_40631859_40631889	0.243562	UCACAUU	ENST00000295971.7|RBM47|ENSG00000163694.10|RNA binding motif protein 47 	ENST00000319592.4|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr15_-_80695917_80695917	0.237095	UCACAUU	ENST00000559008.1|RP11-210M15.2|ENSG00000259495.1|Uncharacterized protein
hg19_v2_chr4_+_72204755_72204778	0.235833	UCACAUU	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr5_+_76506706_76506787	0.233503	UCACAUU	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chrX_+_115567767_115567790	0.22838	UCACAUU	ENST00000371900.4|SLC6A14|ENSG00000087916.7|solute carrier family 6 (amino acid transporter), member 14
hg19_v2_chr1_-_93645818_93645918	0.227436	UCACAUU	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr12_+_107349497_107349578	0.227094	UCACAUU	ENST00000548125.1|C12orf23|ENSG00000151135.5|chromosome 12 open reading frame 23 	ENST00000280756.4|C12orf23|ENSG00000151135.5|chromosome 12 open reading frame 23
hg19_v2_chr1_-_51984908_51984952	0.224074	UCACAUU	ENST00000371730.2|EPS15|ENSG00000085832.12|epidermal growth factor receptor pathway substrate 15
hg19_v2_chr4_+_140222609_140222742	0.222444	UCACAUU	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr1_-_150669500_150669602	0.222097	UCACAUU	ENST00000271732.3|GOLPH3L|ENSG00000143457.6|golgi phosphoprotein 3-like
hg19_v2_chr2_-_183903133_183903210	0.217874	UCACAUU	ENST00000361354.4|NCKAP1|ENSG00000061676.10|NCK-associated protein 1
hg19_v2_chr14_+_73525144_73525224	0.216509	UCACAUU	ENST00000261973.7|RBM25|ENSG00000119707.9|RNA binding motif protein 25 	ENST00000540173.1|RBM25|ENSG00000119707.9|RNA binding motif protein 25
hg19_v2_chr11_+_32914579_32914724	0.213313	UCACAUU	ENST00000399302.2|QSER1|ENSG00000060749.10|glutamine and serine rich 1
hg19_v2_chr5_-_79551858_79551907	0.207844	UCACAUU	ENST00000507668.2|SERINC5|ENSG00000164300.11|serine incorporator 5 	ENST00000512721.1|SERINC5|ENSG00000164300.11|serine incorporator 5
hg19_v2_chr3_-_87040233_87040257	0.207568	UCACAUU	ENST00000398399.2|VGLL3|ENSG00000206538.3|vestigial like 3 (Drosophila)
hg19_v2_chr4_+_41937131_41937211	0.204012	UCACAUU	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr3_+_196466710_196466824	0.200737	UCACAUU	ENST00000327134.3|PAK2|ENSG00000180370.6|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v2_chr5_+_118407053_118407239	0.197885	UCACAUU	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr5_+_65222299_65222361	0.195958	UCACAUU	ENST00000284037.5|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein
hg19_v2_chr2_-_200322723_200322819	0.194563	UCACAUU	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr14_-_39639523_39639617	0.193367	UCACAUU	ENST00000330149.5|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B 	ENST00000554018.1|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B 	ENST00000347691.5|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B
hg19_v2_chr2_+_42396472_42396563	0.192953	UCACAUU	ENST00000318522.5|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4 	ENST00000402711.2|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4
hg19_v2_chr11_-_129872712_129872755	0.192867	UCACAUU	ENST00000358825.5|PRDM10|ENSG00000170325.10|PR domain containing 10 	ENST00000360871.3|PRDM10|ENSG00000170325.10|PR domain containing 10 	ENST00000528746.1|PRDM10|ENSG00000170325.10|PR domain containing 10
hg19_v2_chr3_-_113465065_113465147	0.190557	UCACAUU	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr4_-_76439596_76439643	0.186549	UCACAUU	ENST00000451788.1|RCHY1|ENSG00000163743.9|ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase 	ENST00000512706.1|RCHY1|ENSG00000163743.9|ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
hg19_v2_chr7_+_99613195_99613206	0.185991	UCACAUU	ENST00000324306.6|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chr19_+_45973120_45973171	0.185378	UCACAUU	ENST00000592811.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000586615.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v2_chr1_+_78470530_78470551	0.183764	UCACAUU	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr17_-_49337392_49337465	0.183111	UCACAUU	ENST00000376381.2|MBTD1|ENSG00000011258.11|mbt domain containing 1 	ENST00000586178.1|MBTD1|ENSG00000011258.11|mbt domain containing 1
hg19_v2_chr2_+_135676381_135676435	0.177281	UCACAUU	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr1_-_150849208_150849244	0.175681	UCACAUU	ENST00000358595.5|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr6_+_89790490_89790506	0.172882	UCACAUU	ENST00000336032.3|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr10_-_119806085_119806114	0.172795	UCACAUU	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr14_-_38064198_38064239	0.170896	UCACAUU	ENST00000250448.2|FOXA1|ENSG00000129514.4|forkhead box A1
hg19_v2_chr3_-_138553594_138553684	0.170784	UCACAUU	ENST00000477593.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta 	ENST00000483968.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
hg19_v2_chr17_+_28705921_28706000	0.16972	UCACAUU	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr5_+_133984462_133984514	0.167649	UCACAUU	ENST00000398844.2|SEC24A|ENSG00000113615.8|SEC24 family member A 	ENST00000322887.4|SEC24A|ENSG00000113615.8|SEC24 family member A
hg19_v2_chr17_+_25799008_25799036	0.167452	UCACAUU	ENST00000583370.1|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000398988.3|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000268763.6|KSR1|ENSG00000141068.9|kinase suppressor of ras 1
hg19_v2_chr6_-_82462425_82462491	0.167001	UCACAUU	ENST00000369754.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000320172.6|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000369756.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A
hg19_v2_chr7_-_95225768_95225967	0.166006	UCACAUU	ENST00000005178.5|PDK4|ENSG00000004799.7|pyruvate dehydrogenase kinase, isozyme 4
hg19_v2_chr4_-_68566832_68566897	0.164139	UCACAUU	ENST00000420827.2|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6 	ENST00000322244.5|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6
hg19_v2_chr7_+_90032667_90032793	0.162078	UCACAUU	ENST00000496677.1|CLDN12|ENSG00000157224.11|claudin 12 	ENST00000287916.4|CLDN12|ENSG00000157224.11|claudin 12 	ENST00000535571.1|CLDN12|ENSG00000157224.11|claudin 12 	ENST00000394604.1|CLDN12|ENSG00000157224.11|claudin 12 	ENST00000394605.2|CLDN12|ENSG00000157224.11|claudin 12
hg19_v2_chr4_+_41992489_41992561	0.161795	UCACAUU	ENST00000264451.7|SLC30A9|ENSG00000014824.9|solute carrier family 30 (zinc transporter), member 9
hg19_v2_chr2_+_196521458_196521491	0.160986	UCACAUU	ENST00000409086.3|SLC39A10|ENSG00000196950.9|solute carrier family 39 (zinc transporter), member 10
hg19_v2_chr9_+_4490394_4490446	0.159616	UCACAUU	ENST00000262352.3|SLC1A1|ENSG00000106688.7|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v2_chr3_-_88108192_88108203	0.158139	UCACAUU	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chrX_-_135056216_135056227	0.156658	UCACAUU	ENST00000305963.2|MMGT1|ENSG00000169446.4|membrane magnesium transporter 1
hg19_v2_chr10_+_73724123_73724206	0.156653	UCACAUU	ENST00000373115.4|CHST3|ENSG00000122863.5|carbohydrate (chondroitin 6) sulfotransferase 3
hg19_v2_chr16_+_53468332_53468414	0.15658	UCACAUU	ENST00000262133.6|RBL2|ENSG00000103479.10|retinoblastoma-like 2 (p130)
hg19_v2_chr10_-_105615164_105615323	0.156336	UCACAUU	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr12_-_105478339_105478361	0.156142	UCACAUU	ENST00000424857.2|ALDH1L2|ENSG00000136010.9|aldehyde dehydrogenase 1 family, member L2 	ENST00000258494.9|ALDH1L2|ENSG00000136010.9|aldehyde dehydrogenase 1 family, member L2
hg19_v2_chr2_-_172017343_172017391	0.15494	UCACAUU	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr14_-_57735528_57735726	0.154804	UCACAUU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr2_+_43864387_43864472	0.154562	UCACAUU	ENST00000282406.4|PLEKHH2|ENSG00000152527.9|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
hg19_v2_chr15_-_52861394_52861436	0.151297	UCACAUU	ENST00000563277.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa 	ENST00000566423.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa
hg19_v2_chr10_+_112836779_112836797	0.148609	UCACAUU	ENST00000280155.2|ADRA2A|ENSG00000150594.5|adrenoceptor alpha 2A
hg19_v2_chr4_+_154387480_154387536	0.14826	UCACAUU	ENST00000409663.3|KIAA0922|ENSG00000121210.11|KIAA0922 	ENST00000440693.1|KIAA0922|ENSG00000121210.11|KIAA0922 	ENST00000409959.3|KIAA0922|ENSG00000121210.11|KIAA0922
hg19_v2_chr14_+_74318513_74318562	0.147515	UCACAUU	ENST00000555228.1|PTGR2|ENSG00000140043.7|prostaglandin reductase 2 	ENST00000555661.1|PTGR2|ENSG00000140043.7|prostaglandin reductase 2
hg19_v2_chr1_-_225615599_225615802	0.146838	UCACAUU	ENST00000421383.1|LBR|ENSG00000143815.10|lamin B receptor 	ENST00000272163.4|LBR|ENSG00000143815.10|lamin B receptor
hg19_v2_chr14_+_39736299_39736412	0.145238	UCACAUU	ENST00000341502.5|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000396158.2|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000280083.3|CTAGE5|ENSG00000150527.12|CTAGE family, member 5
hg19_v2_chr3_-_24536253_24536328	0.14523	UCACAUU	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr1_+_82266053_82266082	0.14476	UCACAUU	ENST00000370715.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370713.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000319517.6|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370717.2|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000394879.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000271029.4|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000335786.5|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr1_+_185126291_185126307	0.144746	UCACAUU	ENST00000367500.4|SWT1|ENSG00000116668.8|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg19_v2_chr21_-_15755446_15755508	0.144474	UCACAUU	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr10_-_102046098_102046122	0.142481	UCACAUU	ENST00000441611.1|BLOC1S2|ENSG00000196072.7|biogenesis of lysosomal organelles complex-1, subunit 2
hg19_v2_chr2_-_70475730_70475798	0.141827	UCACAUU	ENST00000445587.1|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000433529.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000415783.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr20_-_31071239_31071307	0.141802	UCACAUU	ENST00000359676.5|C20orf112|ENSG00000197183.8|chromosome 20 open reading frame 112
hg19_v2_chr14_-_31495569_31495636	0.141334	UCACAUU	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chr14_-_74485960_74486035	0.14006	UCACAUU	ENST00000556242.1|ENTPD5|ENSG00000187097.8|ectonucleoside triphosphate diphosphohydrolase 5 	ENST00000334696.6|ENTPD5|ENSG00000187097.8|ectonucleoside triphosphate diphosphohydrolase 5
hg19_v2_chr1_-_120190396_120190396	0.139296	UCACAUU	ENST00000421812.2|ZNF697|ENSG00000143067.4|zinc finger protein 697
hg19_v2_chr1_+_200708671_200708744	0.138862	UCACAUU	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr11_+_86748863_86748948	0.138035	UCACAUU	ENST00000340353.7|TMEM135|ENSG00000166575.12|transmembrane protein 135
hg19_v2_chr4_+_123747834_123747863	0.135479	UCACAUU	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr10_-_95462265_95462378	0.134355	UCACAUU	ENST00000536233.1|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 	ENST00000359204.4|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 	ENST00000371430.2|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 	ENST00000394100.2|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
hg19_v2_chr18_+_9913977_9914088	0.133884	UCACAUU	ENST00000400000.2|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 	ENST00000340541.4|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
hg19_v2_chr9_+_102668915_102669024	0.133601	UCACAUU	ENST00000259400.6|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000531035.1|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000525640.1|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000534052.1|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000526607.1|STX17|ENSG00000136874.6|syntaxin 17
hg19_v2_chr3_-_15374033_15374136	0.132687	UCACAUU	ENST00000253688.5|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated) 	ENST00000383791.3|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated)
hg19_v2_chr4_-_125633876_125633897	0.132177	UCACAUU	ENST00000504087.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50 	ENST00000515641.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50
hg19_v2_chr2_+_24714729_24714927	0.130051	UCACAUU	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr8_-_94753229_94753263	0.129968	UCACAUU	ENST00000518597.1|RBM12B|ENSG00000183808.7|RNA binding motif protein 12B 	ENST00000399300.2|RBM12B|ENSG00000183808.7|RNA binding motif protein 12B 	ENST00000517700.1|RBM12B|ENSG00000183808.7|RNA binding motif protein 12B
hg19_v2_chr9_+_15553055_15553101	0.129234	UCACAUU	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr10_+_112631547_112631596	0.12838	UCACAUU	ENST00000280154.7|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor) 	ENST00000393104.2|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor)
hg19_v2_chr14_-_35182994_35183034	0.127695	UCACAUU	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr12_+_862089_862343	0.12758	UCACAUU	ENST00000315939.6|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000537687.1|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000447667.2|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1
hg19_v2_chr12_-_93323013_93323112	0.127023	UCACAUU	ENST00000322349.8|EEA1|ENSG00000102189.12|early endosome antigen 1
hg19_v2_chr4_+_128554081_128554121	0.126947	UCACAUU	ENST00000335251.6|INTU|ENSG00000164066.8|inturned planar cell polarity protein 	ENST00000296461.5|INTU|ENSG00000164066.8|inturned planar cell polarity protein
hg19_v2_chr5_+_145583156_145583180	0.12645	UCACAUU	ENST00000265271.5|RBM27|ENSG00000091009.6|RNA binding motif protein 27
hg19_v2_chr5_-_76383133_76383186	0.126192	UCACAUU	ENST00000255198.2|ZBED3|ENSG00000132846.5|zinc finger, BED-type containing 3
hg19_v2_chrX_+_70316005_70316047	0.124498	UCACAUU	ENST00000374259.3|FOXO4|ENSG00000184481.12|forkhead box O4
hg19_v2_chr2_-_96781984_96781984	0.124112	UCACAUU	ENST00000409345.3|ADRA2B|ENSG00000222040.3|adrenoceptor alpha 2B
hg19_v2_chr8_+_37620097_37620146	0.123953	UCACAUU	ENST00000328195.3|PROSC|ENSG00000147471.7|proline synthetase co-transcribed homolog (bacterial) 	ENST00000523358.1|PROSC|ENSG00000147471.7|proline synthetase co-transcribed homolog (bacterial) 	ENST00000523187.1|PROSC|ENSG00000147471.7|proline synthetase co-transcribed homolog (bacterial)
hg19_v2_chr2_-_208634287_208634439	0.122041	UCACAUU	ENST00000295417.3|FZD5|ENSG00000163251.3|frizzled family receptor 5
hg19_v2_chr12_+_70636765_70636817	0.119977	UCACAUU	ENST00000552231.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000229195.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000547780.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000418359.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2
hg19_v2_chr4_-_23891693_23891706	0.119666	UCACAUU	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr2_+_60983361_60983418	0.119251	UCACAUU	ENST00000238714.3|PAPOLG|ENSG00000115421.8|poly(A) polymerase gamma
hg19_v2_chrX_-_30885319_30885319	0.119021	UCACAUU	ENST00000378933.1|TAB3|ENSG00000157625.11|TGF-beta activated kinase 1/MAP3K7 binding protein 3
hg19_v2_chr10_-_65225722_65225755	0.118214	UCACAUU	ENST00000399251.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chrX_-_138914394_138914447	0.117488	UCACAUU	ENST00000327569.3|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000361648.2|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000370543.1|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000359686.2|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C
hg19_v2_chr17_-_62658186_62658231	0.113984	UCACAUU	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr1_-_68962782_68962801	0.112219	UCACAUU	ENST00000456315.2|DEPDC1|ENSG00000024526.12|DEP domain containing 1
hg19_v2_chr20_+_31407692_31407709	0.111247	UCACAUU	ENST00000375571.5|MAPRE1|ENSG00000101367.8|microtubule-associated protein, RP/EB family, member 1
hg19_v2_chr13_-_52027134_52027343	0.110313	UCACAUU	ENST00000311234.4|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000425000.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000463928.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000442263.3|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000398119.2|INTS6|ENSG00000102786.10|integrator complex subunit 6
hg19_v2_chr17_-_46671323_46671323	0.109749	UCACAUU	ENST00000239151.5|HOXB5|ENSG00000120075.5|homeobox B5
hg19_v2_chr2_-_153574480_153574552	0.107096	UCACAUU	ENST00000410080.1|PRPF40A|ENSG00000196504.11|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg19_v2_chr20_-_48099182_48099214	0.106645	UCACAUU	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr6_+_110501344_110501412	0.106507	UCACAUU	ENST00000368932.1|CDC40|ENSG00000168438.10|cell division cycle 40
hg19_v2_chrX_-_64196307_64196338	0.103459	UCACAUU	ENST00000545618.1|ZC4H2|ENSG00000126970.11|zinc finger, C4H2 domain containing
hg19_v2_chr16_-_56485257_56485287	0.103021	UCACAUU	ENST00000300291.5|NUDT21|ENSG00000167005.9|nudix (nucleoside diphosphate linked moiety X)-type motif 21
hg19_v2_chr17_-_58603568_58603610	0.102769	UCACAUU	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr2_+_28974668_28974729	0.102282	UCACAUU	ENST00000296122.6|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme 	ENST00000395366.2|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr6_-_64029879_64029891	0.101718	UCACAUU	ENST00000370658.5|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain 	ENST00000485906.2|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain 	ENST00000370657.4|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain
hg19_v2_chr13_+_20532807_20532841	0.101265	UCACAUU	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr14_+_50234309_50234330	0.101179	UCACAUU	ENST00000298307.5|KLHDC2|ENSG00000165516.6|kelch domain containing 2
hg19_v2_chr2_+_139259324_139259389	0.100886	UCACAUU	ENST00000280098.4|SPOPL|ENSG00000144228.4|speckle-type POZ protein-like
hg19_v2_chr7_-_11871815_11871831	0.0998218	UCACAUU	ENST00000423059.4|THSD7A|ENSG00000005108.11|thrombospondin, type I, domain containing 7A
hg19_v2_chr1_-_231473578_231473619	0.0994178	UCACAUU	ENST00000360394.2|EXOC8|ENSG00000116903.6|exocyst complex component 8 	ENST00000366645.1|EXOC8|ENSG00000116903.6|exocyst complex component 8
hg19_v2_chr20_+_47662805_47662907	0.0983873	UCACAUU	ENST00000262982.2|CSE1L|ENSG00000124207.12|CSE1 chromosome segregation 1-like (yeast) 	ENST00000542325.1|CSE1L|ENSG00000124207.12|CSE1 chromosome segregation 1-like (yeast)
hg19_v2_chr18_+_67956135_67956144	0.0974775	UCACAUU	ENST00000397942.3|SOCS6|ENSG00000170677.5|suppressor of cytokine signaling 6
hg19_v2_chr12_+_72233487_72233563	0.0969192	UCACAUU	ENST00000482439.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000550746.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000491063.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000319106.8|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000485960.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000393309.3|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15
hg19_v2_chr21_+_44394620_44394737	0.0961848	UCACAUU	ENST00000291547.5|PKNOX1|ENSG00000160199.10|PBX/knotted 1 homeobox 1
hg19_v2_chr3_+_88188254_88188254	0.0954629	UCACAUU	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr8_-_8751068_8751158	0.0951056	UCACAUU	ENST00000276282.6|MFHAS1|ENSG00000147324.6|malignant fibrous histiocytoma amplified sequence 1
hg19_v2_chr9_-_125027079_125027130	0.0946291	UCACAUU	ENST00000417201.3|RBM18|ENSG00000119446.9|RNA binding motif protein 18
hg19_v2_chr10_+_70480963_70481010	0.0934555	UCACAUU	ENST00000265872.6|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000535016.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000538031.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543719.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000539539.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543225.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000536012.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000494903.2|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1
hg19_v2_chr10_+_126490354_126490395	0.0929729	UCACAUU	ENST00000298492.5|FAM175B|ENSG00000165660.7|family with sequence similarity 175, member B
hg19_v2_chr4_+_39046615_39046680	0.0923404	UCACAUU	ENST00000261425.3|KLHL5|ENSG00000109790.12|kelch-like family member 5 	ENST00000508137.2|KLHL5|ENSG00000109790.12|kelch-like family member 5
hg19_v2_chr4_-_174256276_174256303	0.0922471	UCACAUU	ENST00000296503.5|HMGB2|ENSG00000164104.7|high mobility group box 2
hg19_v2_chr7_-_87505658_87505717	0.0920728	UCACAUU	ENST00000341119.5|SLC25A40|ENSG00000075303.8|solute carrier family 25, member 40
hg19_v2_chr10_-_101491828_101491900	0.0912564	UCACAUU	ENST00000370483.5|COX15|ENSG00000014919.8|cytochrome c oxidase assembly homolog 15 (yeast) 	ENST00000016171.5|COX15|ENSG00000014919.8|cytochrome c oxidase assembly homolog 15 (yeast)
hg19_v2_chr17_-_65241281_65241326	0.0903739	UCACAUU	ENST00000358691.5|HELZ|ENSG00000198265.7|helicase with zinc finger 	ENST00000580168.1|HELZ|ENSG00000198265.7|helicase with zinc finger
hg19_v2_chr4_-_25162188_25162208	0.0896029	UCACAUU	ENST00000302922.3|SEPSECS|ENSG00000109618.7|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
hg19_v2_chr7_+_94139105_94139197	0.0892895	UCACAUU	ENST00000297273.4|CASD1|ENSG00000127995.12|CAS1 domain containing 1
hg19_v2_chrX_-_119077695_119077757	0.0890384	UCACAUU	ENST00000371410.3|NKAP|ENSG00000101882.5|NFKB activating protein
hg19_v2_chr11_+_82868030_82868179	0.0887528	UCACAUU	ENST00000298281.4|PCF11|ENSG00000165494.6|PCF11 cleavage and polyadenylation factor subunit 	ENST00000530660.1|PCF11|ENSG00000165494.6|PCF11 cleavage and polyadenylation factor subunit
hg19_v2_chr7_-_155604967_155605105	0.0884778	UCACAUU	ENST00000297261.2|SHH|ENSG00000164690.3|sonic hedgehog
hg19_v2_chr10_-_70166946_70166950	0.0879821	UCACAUU	ENST00000388768.2|RUFY2|ENSG00000204130.8|RUN and FYVE domain containing 2
hg19_v2_chr12_+_31812602_31812645	0.0879135	UCACAUU	ENST00000538463.1|METTL20|ENSG00000139160.9|methyltransferase like 20 	ENST00000357721.3|METTL20|ENSG00000139160.9|methyltransferase like 20 	ENST00000539633.1|METTL20|ENSG00000139160.9|methyltransferase like 20
hg19_v2_chr1_+_171810606_171810649	0.0877134	UCACAUU	ENST00000358155.4|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367733.2|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000355305.5|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367731.1|DNM3|ENSG00000197959.9|dynamin 3
hg19_v2_chr2_+_172950227_172950264	0.0875092	UCACAUU	ENST00000341900.6|DLX1|ENSG00000144355.10|distal-less homeobox 1
hg19_v2_chr2_-_54087066_54087297	0.0873093	UCACAUU	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr4_-_102268628_102268693	0.0868503	UCACAUU	ENST00000323055.6|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000512215.1|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000394854.3|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr20_+_43595115_43595220	0.0868147	UCACAUU	ENST00000372806.3|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000396731.4|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000372801.1|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000499879.2|STK4|ENSG00000101109.7|serine/threonine kinase 4
hg19_v2_chr3_+_101292939_101293063	0.0866819	UCACAUU	ENST00000265260.3|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000469941.1|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000296024.5|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein
hg19_v2_chr17_+_43224684_43224684	0.0863751	UCACAUU	ENST00000332499.2|HEXIM1|ENSG00000186834.2|hexamethylene bis-acetamide inducible 1
hg19_v2_chr2_+_178977143_178977211	0.086182	UCACAUU	ENST00000286070.5|RBM45|ENSG00000155636.10|RNA binding motif protein 45
hg19_v2_chr1_-_108742957_108743003	0.085814	UCACAUU	ENST00000565488.1|SLC25A24|ENSG00000085491.11|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
hg19_v2_chr7_-_75988321_75988348	0.0856814	UCACAUU	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr20_+_13202418_13202418	0.085434	UCACAUU	ENST00000262487.4|ISM1|ENSG00000101230.5|isthmin 1, angiogenesis inhibitor
hg19_v2_chr6_+_117996621_117996665	0.0851595	UCACAUU	ENST00000368494.3|NUS1|ENSG00000153989.7|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
hg19_v2_chr12_+_112856690_112856731	0.0849752	UCACAUU	ENST00000392597.1|PTPN11|ENSG00000179295.11|protein tyrosine phosphatase, non-receptor type 11 	ENST00000351677.2|PTPN11|ENSG00000179295.11|protein tyrosine phosphatase, non-receptor type 11
hg19_v2_chr17_+_1958388_1958404	0.0847473	UCACAUU	ENST00000399849.3|HIC1|ENSG00000177374.8|hypermethylated in cancer 1
hg19_v2_chr7_-_44924939_44924993	0.0840791	UCACAUU	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr16_+_15068955_15068991	0.0839534	UCACAUU	ENST00000396410.4|PDXDC1|ENSG00000179889.14|pyridoxal-dependent decarboxylase domain containing 1 	ENST00000569715.1|PDXDC1|ENSG00000179889.14|pyridoxal-dependent decarboxylase domain containing 1 	ENST00000450288.2|PDXDC1|ENSG00000179889.14|pyridoxal-dependent decarboxylase domain containing 1
hg19_v2_chr15_-_31283798_31283851	0.0837128	UCACAUU	ENST00000435680.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10 	ENST00000425768.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10
hg19_v2_chr1_-_20812690_20812763	0.0836289	UCACAUU	ENST00000375078.3|CAMK2N1|ENSG00000162545.5|calcium/calmodulin-dependent protein kinase II inhibitor 1
hg19_v2_chr6_+_71998506_71998522	0.0834623	UCACAUU	ENST00000370435.4|OGFRL1|ENSG00000119900.7|opioid growth factor receptor-like 1
hg19_v2_chr10_+_134351319_134351353	0.0834412	UCACAUU	ENST00000368594.3|INPP5A|ENSG00000068383.14|inositol polyphosphate-5-phosphatase, 40kDa 	ENST00000368593.3|INPP5A|ENSG00000068383.14|inositol polyphosphate-5-phosphatase, 40kDa
hg19_v2_chr4_-_24586140_24586188	0.0832755	UCACAUU	ENST00000336812.4|DHX15|ENSG00000109606.8|DEAH (Asp-Glu-Ala-His) box helicase 15
hg19_v2_chr6_+_4021554_4021656	0.0831996	UCACAUU	ENST00000337659.6|PRPF4B|ENSG00000112739.12|pre-mRNA processing factor 4B
hg19_v2_chr13_+_43597269_43597339	0.0829048	UCACAUU	ENST00000379221.2|DNAJC15|ENSG00000120675.4|DnaJ (Hsp40) homolog, subfamily C, member 15
hg19_v2_chr4_-_103748880_103749047	0.0823548	UCACAUU	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr16_-_46723066_46723121	0.0819497	UCACAUU	ENST00000299138.7|VPS35|ENSG00000069329.11|vacuolar protein sorting 35 homolog (S. cerevisiae)
hg19_v2_chr3_+_140660634_140660729	0.0816494	UCACAUU	ENST00000446041.2|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000507429.1|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000324194.6|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36
hg19_v2_chr21_+_39628655_39628672	0.0807641	UCACAUU	ENST00000398925.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15 	ENST00000398928.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15 	ENST00000328656.4|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15 	ENST00000443341.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
hg19_v2_chr3_+_134204881_134204913	0.0807538	UCACAUU	ENST00000511574.1|CEP63|ENSG00000182923.12|centrosomal protein 63kDa 	ENST00000337090.3|CEP63|ENSG00000182923.12|centrosomal protein 63kDa 	ENST00000383229.3|CEP63|ENSG00000182923.12|centrosomal protein 63kDa
hg19_v2_chr7_-_123389104_123389161	0.0800882	UCACAUU	ENST00000223023.4|WASL|ENSG00000106299.7|Wiskott-Aldrich syndrome-like
hg19_v2_chr6_-_151712673_151712709	0.0796316	UCACAUU	ENST00000325144.4|ZBTB2|ENSG00000181472.4|zinc finger and BTB domain containing 2
hg19_v2_chr5_+_56469775_56469837	0.0793982	UCACAUU	ENST00000424459.3|GPBP1|ENSG00000062194.11|GC-rich promoter binding protein 1
hg19_v2_chr1_+_28586006_28586044	0.0790562	UCACAUU	ENST00000253063.3|SESN2|ENSG00000130766.4|sestrin 2
hg19_v2_chrX_-_63425561_63425624	0.0781659	UCACAUU	ENST00000374869.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1 	ENST00000330258.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1
hg19_v2_chrX_+_146993449_146993498	0.0778887	UCACAUU	ENST00000218200.8|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370471.3|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370477.1|FMR1|ENSG00000102081.9|fragile X mental retardation 1
hg19_v2_chr7_+_89975979_89976052	0.0769096	UCACAUU	ENST00000257659.8|GTPBP10|ENSG00000105793.11|GTP-binding protein 10 (putative) 	ENST00000222511.6|GTPBP10|ENSG00000105793.11|GTP-binding protein 10 (putative) 	ENST00000417207.1|GTPBP10|ENSG00000105793.11|GTP-binding protein 10 (putative)
hg19_v2_chr17_+_57784826_57784883	0.0765889	UCACAUU	ENST00000262291.4|VMP1|ENSG00000062716.6|vacuole membrane protein 1
hg19_v2_chr20_+_39657454_39657470	0.0765341	UCACAUU	ENST00000361337.2|TOP1|ENSG00000198900.5|topoisomerase (DNA) I
hg19_v2_chr16_-_4987065_4987156	0.0764003	UCACAUU	ENST00000590782.2|PPL|ENSG00000118898.11|periplakin 	ENST00000345988.2|PPL|ENSG00000118898.11|periplakin
hg19_v2_chr8_+_74206829_74206847	0.0762162	UCACAUU	ENST00000240285.5|RDH10|ENSG00000121039.5|retinol dehydrogenase 10 (all-trans)
hg19_v2_chr1_+_218519577_218519594	0.0757558	UCACAUU	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr3_+_69812877_69812962	0.0757402	UCACAUU	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr20_+_60718785_60718853	0.0756793	UCACAUU	ENST00000421564.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000450482.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000331758.3|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1
hg19_v2_chr2_-_55844720_55844772	0.0750432	UCACAUU	ENST00000345102.5|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium) 	ENST00000272313.5|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium) 	ENST00000407823.3|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium)
hg19_v2_chr8_-_28243934_28243993	0.0749812	UCACAUU	ENST00000521185.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000520290.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000344423.5|ZNF395|ENSG00000186918.9|zinc finger protein 395
hg19_v2_chr3_-_133380731_133380834	0.0744492	UCACAUU	ENST00000260810.5|TOPBP1|ENSG00000163781.8|topoisomerase (DNA) II binding protein 1
hg19_v2_chr11_+_14665263_14665274	0.0743827	UCACAUU	ENST00000282096.4|PDE3B|ENSG00000152270.4|phosphodiesterase 3B, cGMP-inhibited
hg19_v2_chr17_-_33814851_33814890	0.0740759	UCACAUU	ENST00000449046.1|SLFN12L|ENSG00000205045.4|schlafen family member 12-like 	ENST00000260908.7|SLFN12L|ENSG00000205045.4|schlafen family member 12-like
hg19_v2_chr8_-_117886955_117887105	0.0740415	UCACAUU	ENST00000297338.2|RAD21|ENSG00000164754.8|RAD21 homolog (S. pombe)
hg19_v2_chr5_+_32788945_32788945	0.0738407	UCACAUU	ENST00000326958.1|AC026703.1|ENSG00000181495.1|AC026703.1
hg19_v2_chr15_+_41709302_41709348	0.0736118	UCACAUU	ENST00000389629.4|RTF1|ENSG00000137815.10|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg19_v2_chr17_+_4901199_4901291	0.0736068	UCACAUU	ENST00000320785.5|KIF1C|ENSG00000129250.7|kinesin family member 1C 	ENST00000574165.1|KIF1C|ENSG00000129250.7|kinesin family member 1C
hg19_v2_chr11_-_85780086_85780161	0.0728774	UCACAUU	ENST00000532317.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000528256.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000526033.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein
hg19_v2_chr19_+_1249869_1249894	0.0725038	UCACAUU	ENST00000591446.2|MIDN|ENSG00000167470.8|midnolin
hg19_v2_chr3_+_5163905_5164039	0.0721061	UCACAUU	ENST00000256496.3|ARL8B|ENSG00000134108.8|ADP-ribosylation factor-like 8B 	ENST00000419534.2|ARL8B|ENSG00000134108.8|ADP-ribosylation factor-like 8B
hg19_v2_chr15_-_64648273_64648442	0.0718495	UCACAUU	ENST00000607537.1|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303052.7|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303032.6|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1
hg19_v2_chr3_-_119813264_119813272	0.0709232	UCACAUU	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr14_-_59932044_59932114	0.0704186	UCACAUU	ENST00000395116.1|GPR135|ENSG00000181619.11|G protein-coupled receptor 135
hg19_v2_chr17_-_3749515_3749551	0.0698813	UCACAUU	ENST00000158149.3|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85 	ENST00000389005.4|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85
hg19_v2_chr2_-_179343268_179343338	0.0694654	UCACAUU	ENST00000424785.2|FKBP7|ENSG00000079150.13|FK506 binding protein 7
hg19_v2_chr14_-_89259080_89259096	0.0691657	UCACAUU	ENST00000554922.1|EML5|ENSG00000165521.11|echinoderm microtubule associated protein like 5 	ENST00000352093.5|EML5|ENSG00000165521.11|echinoderm microtubule associated protein like 5
hg19_v2_chr13_-_31736027_31736064	0.0688424	UCACAUU	ENST00000380406.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000320027.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000380405.4|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1
hg19_v2_chr15_-_30114622_30114706	0.0684608	UCACAUU	ENST00000495972.2|TJP1|ENSG00000104067.12|tight junction protein 1 	ENST00000346128.6|TJP1|ENSG00000104067.12|tight junction protein 1
hg19_v2_chr3_+_50712672_50712703	0.0681585	UCACAUU	ENST00000266037.9|DOCK3|ENSG00000088538.12|dedicator of cytokinesis 3
hg19_v2_chr12_+_68042495_68042508	0.0675391	UCACAUU	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr5_-_40755987_40756077	0.0672828	UCACAUU	ENST00000337702.4|TTC33|ENSG00000113638.8|tetratricopeptide repeat domain 33
hg19_v2_chr21_-_40685477_40685496	0.0669175	UCACAUU	ENST00000342449.3|BRWD1|ENSG00000185658.9|bromodomain and WD repeat domain containing 1
hg19_v2_chr15_-_27018175_27018241	0.0640815	UCACAUU	ENST00000311550.5|GABRB3|ENSG00000166206.9|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg19_v2_chr14_-_68141535_68141574	0.0640278	UCACAUU	ENST00000554659.1|VTI1B|ENSG00000100568.6|vesicle transport through interaction with t-SNAREs 1B
hg19_v2_chr1_+_33283043_33283198	0.0640014	UCACAUU	ENST00000373476.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000373475.5|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000529027.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000398243.3|S100PBP|ENSG00000116497.13|S100P binding protein
hg19_v2_chr12_+_69004619_69004699	0.0636137	UCACAUU	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chr1_+_162467595_162467655	0.0626567	UCACAUU	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr6_+_33422343_33422394	0.0621605	UCACAUU	ENST00000395064.2|ZBTB9|ENSG00000213588.4|zinc finger and BTB domain containing 9
hg19_v2_chr7_+_116312411_116312502	0.0617984	UCACAUU	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr5_+_140254884_140255058	0.0615171	UCACAUU	ENST00000398631.2|PCDHA12|ENSG00000251664.2|protocadherin alpha 12
hg19_v2_chr2_-_175113301_175113426	0.0611738	UCACAUU	ENST00000344357.5|OLA1|ENSG00000138430.11|Obg-like ATPase 1 	ENST00000284719.3|OLA1|ENSG00000138430.11|Obg-like ATPase 1
hg19_v2_chr3_+_188889737_188889767	0.0611472	UCACAUU	ENST00000345063.3|TPRG1|ENSG00000188001.5|tumor protein p63 regulated 1
hg19_v2_chr5_+_32711419_32711540	0.0592679	UCACAUU	ENST00000265074.8|NPR3|ENSG00000113389.11|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)
hg19_v2_chr8_+_26240414_26240631	0.0586408	UCACAUU	ENST00000380629.2|BNIP3L|ENSG00000104765.10|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg19_v2_chr6_-_116575226_116575278	0.0585217	UCACAUU	ENST00000420283.1|TSPYL4|ENSG00000187189.9|TSPY-like 4
hg19_v2_chr4_+_129730779_129730826	0.0584696	UCACAUU	ENST00000226319.6|PHF17|ENSG00000077684.11|jade family PHD finger 1
hg19_v2_chrX_-_20284958_20285039	0.0584657	UCACAUU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr5_+_135468516_135468621	0.0583051	UCACAUU	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr6_-_8064567_8064652	0.0575846	UCACAUU	ENST00000543936.1|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted 	ENST00000397457.2|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted
hg19_v2_chr10_-_120840309_120840338	0.0571885	UCACAUU	ENST00000369144.3|EIF3A|ENSG00000107581.8|eukaryotic translation initiation factor 3, subunit A
hg19_v2_chr3_-_135914615_135914701	0.0567755	UCACAUU	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr4_+_124320665_124320702	0.0566249	UCACAUU	ENST00000394339.2|SPRY1|ENSG00000164056.6|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg19_v2_chr12_+_104682496_104682651	0.0563767	UCACAUU	ENST00000378070.4|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1
hg19_v2_chr1_+_61547894_61547980	0.0562977	UCACAUU	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr1_-_84464780_84464862	0.0559946	UCACAUU	ENST00000260505.8|TTLL7|ENSG00000137941.12|tubulin tyrosine ligase-like family, member 7
hg19_v2_chr18_+_60190226_60190314	0.0554762	UCACAUU	ENST00000269499.5|ZCCHC2|ENSG00000141664.5|zinc finger, CCHC domain containing 2
hg19_v2_chr6_-_137113604_137113666	0.0554152	UCACAUU	ENST00000359015.4|MAP3K5|ENSG00000197442.8|mitogen-activated protein kinase kinase kinase 5
hg19_v2_chr8_-_26371608_26371608	0.0553171	UCACAUU	ENST00000522362.2|PNMA2|ENSG00000240694.4|paraneoplastic Ma antigen 2
hg19_v2_chr8_-_67579418_67579498	0.0546999	UCACAUU	ENST00000310421.4|VCPIP1|ENSG00000175073.7|valosin containing protein (p97)/p47 complex interacting protein 1
hg19_v2_chr5_-_162887071_162887166	0.0538691	UCACAUU	ENST00000302764.4|NUDCD2|ENSG00000170584.6|NudC domain containing 2
hg19_v2_chr2_+_173940442_173940625	0.0536358	UCACAUU	ENST00000409176.2|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT  	ENST00000338983.3|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT  	ENST00000431503.2|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT
hg19_v2_chr1_-_65432171_65432252	0.0534698	UCACAUU	ENST00000342505.4|JAK1|ENSG00000162434.7|Janus kinase 1
hg19_v2_chrX_+_64708615_64708615	0.0529235	UCACAUU	ENST00000338957.4|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B 	ENST00000423889.3|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B
hg19_v2_chr18_-_43547223_43547312	0.0525614	UCACAUU	ENST00000282041.5|EPG5|ENSG00000152223.8|ectopic P-granules autophagy protein 5 homolog (C. elegans)
hg19_v2_chr17_+_34900737_34900821	0.0523107	UCACAUU	ENST00000304718.4|GGNBP2|ENSG00000005955.8|gametogenetin binding protein 2 	ENST00000485685.2|GGNBP2|ENSG00000005955.8|gametogenetin binding protein 2
hg19_v2_chr15_-_71055878_71055932	0.0517268	UCACAUU	ENST00000322954.6|UACA|ENSG00000137831.10|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg19_v2_chr6_+_168227611_168227813	0.0517055	UCACAUU	ENST00000344191.4|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000351017.4|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000392108.3|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000366806.2|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000392112.1|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000400824.4|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000447894.2|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000400822.3|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4
hg19_v2_chr9_+_116917807_116917840	0.0513706	UCACAUU	ENST00000356083.3|COL27A1|ENSG00000196739.10|collagen, type XXVII, alpha 1
hg19_v2_chr1_-_212004090_212004168	0.0494497	UCACAUU	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chr11_-_130184555_130184581	0.049448	UCACAUU	ENST00000525842.1|ZBTB44|ENSG00000196323.7|zinc finger and BTB domain containing 44
hg19_v2_chr17_-_41977964_41978013	0.0492373	UCACAUU	ENST00000377184.3|MPP2|ENSG00000108852.10|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
hg19_v2_chr8_+_125985531_125985571	0.0490209	UCACAUU	ENST00000319286.5|ZNF572|ENSG00000180938.5|zinc finger protein 572
hg19_v2_chr2_-_190649082_190649102	0.0478695	UCACAUU	ENST00000392350.3|ORMDL1|ENSG00000128699.9|ORM1-like 1 (S. cerevisiae) 	ENST00000392349.4|ORMDL1|ENSG00000128699.9|ORM1-like 1 (S. cerevisiae)
hg19_v2_chr6_+_33387868_33387941	0.0474466	UCACAUU	ENST00000418600.2|SYNGAP1|ENSG00000197283.8|synaptic Ras GTPase activating protein 1
hg19_v2_chr10_-_735553_735683	0.0473937	UCACAUU	ENST00000280886.6|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila) 	ENST00000423550.1|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v2_chrX_-_154493791_154493874	0.0471468	UCACAUU	ENST00000369454.3|RAB39B|ENSG00000155961.4|RAB39B, member RAS oncogene family
hg19_v2_chr10_-_60027642_60027705	0.0470834	UCACAUU	ENST00000373935.3|IPMK|ENSG00000151151.5|inositol polyphosphate multikinase
hg19_v2_chr5_-_158757895_158757895	0.0470563	UCACAUU	ENST00000231228.2|IL12B|ENSG00000113302.4|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)
hg19_v2_chr6_+_15246501_15246527	0.0470554	UCACAUU	ENST00000341776.2|JARID2|ENSG00000008083.9|jumonji, AT rich interactive domain 2
hg19_v2_chr18_+_67068228_67068291	0.0465441	UCACAUU	ENST00000382713.5|DOK6|ENSG00000206052.6|docking protein 6
hg19_v2_chr10_+_99079008_99079060	0.04644	UCACAUU	ENST00000371021.3|FRAT1|ENSG00000165879.7|frequently rearranged in advanced T-cell lymphomas
hg19_v2_chr4_+_87856129_87856186	0.0458483	UCACAUU	ENST00000395146.4|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1 	ENST00000507468.1|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1
hg19_v2_chr2_+_85766280_85766299	0.04533	UCACAUU	ENST00000306434.3|MAT2A|ENSG00000168906.8|methionine adenosyltransferase II, alpha
hg19_v2_chr19_-_46974741_46974826	0.0450038	UCACAUU	ENST00000313683.10|PNMAL1|ENSG00000182013.13|paraneoplastic Ma antigen family-like 1 	ENST00000602246.1|PNMAL1|ENSG00000182013.13|paraneoplastic Ma antigen family-like 1
hg19_v2_chr9_-_123639600_123639627	0.0448327	UCACAUU	ENST00000373896.3|PHF19|ENSG00000119403.9|PHD finger protein 19
hg19_v2_chr3_-_52713729_52713784	0.0432051	UCACAUU	ENST00000296302.7|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000356770.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000337303.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409057.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000410007.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409114.3|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409767.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000423351.1|PBRM1|ENSG00000163939.14|polybromo 1
hg19_v2_chr15_-_56209306_56209344	0.0430548	UCACAUU	ENST00000506154.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000338963.2|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000508342.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
hg19_v2_chr16_+_81069433_81069462	0.0430467	UCACAUU	ENST00000299575.4|ATMIN|ENSG00000166454.5|ATM interactor
hg19_v2_chr3_+_38495333_38495422	0.0428603	UCACAUU	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr2_+_112812778_112812800	0.0424325	UCACAUU	ENST00000283206.4|TMEM87B|ENSG00000153214.5|transmembrane protein 87B
hg19_v2_chr1_+_112162381_112162431	0.0422959	UCACAUU	ENST00000433097.1|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000369709.3|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000436150.2|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family
hg19_v2_chr4_+_113152881_113152912	0.0422751	UCACAUU	ENST00000274000.5|AP1AR|ENSG00000138660.7|adaptor-related protein complex 1 associated regulatory protein
hg19_v2_chr5_+_140261703_140261854	0.0409437	UCACAUU	ENST00000409494.1|PCDHA13|ENSG00000239389.3|protocadherin alpha 13 	ENST00000289272.2|PCDHA13|ENSG00000239389.3|protocadherin alpha 13
hg19_v2_chr10_+_43633914_43633935	0.0408971	UCACAUU	ENST00000374466.3|CSGALNACT2|ENSG00000169826.6|chondroitin sulfate N-acetylgalactosaminyltransferase 2 	ENST00000374464.1|CSGALNACT2|ENSG00000169826.6|chondroitin sulfate N-acetylgalactosaminyltransferase 2
hg19_v2_chr14_+_60715928_60716007	0.0400447	UCACAUU	ENST00000395076.4|PPM1A|ENSG00000100614.13|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v2_chr2_+_120517174_120517207	0.0400121	UCACAUU	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr12_+_72056773_72056796	0.0399024	UCACAUU	ENST00000308086.2|THAP2|ENSG00000173451.2|THAP domain containing, apoptosis associated protein 2
hg19_v2_chr12_+_62860581_62860629	0.0398723	UCACAUU	ENST00000393632.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393630.3|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000280379.6|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000546600.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552738.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393629.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552115.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae)
hg19_v2_chr17_-_36956155_36956223	0.0397687	UCACAUU	ENST00000269554.3|PIP4K2B|ENSG00000141720.7|phosphatidylinositol-5-phosphate 4-kinase, type II, beta
hg19_v2_chr5_+_140165876_140165876	0.0396211	UCACAUU	ENST00000504120.2|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000394633.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000378133.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1
hg19_v2_chr17_+_54911444_54911564	0.0394615	UCACAUU	ENST00000284061.3|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa 	ENST00000572810.1|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa
hg19_v2_chr6_+_143929307_143929322	0.0394425	UCACAUU	ENST00000427704.2|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2 	ENST00000305766.6|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2
hg19_v2_chr8_-_22550815_22550844	0.0385643	UCACAUU	ENST00000317216.2|EGR3|ENSG00000179388.8|early growth response 3
hg19_v2_chr16_-_49315731_49315754	0.0381912	UCACAUU	ENST00000219197.6|CBLN1|ENSG00000102924.7|cerebellin 1 precursor
hg19_v2_chr16_+_67596310_67596353	0.0381864	UCACAUU	ENST00000264010.4|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein) 	ENST00000401394.1|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein)
hg19_v2_chr1_-_86174065_86174134	0.0379684	UCACAUU	ENST00000370574.3|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6 	ENST00000431532.2|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6
hg19_v2_chr17_-_16472483_16472533	0.0369996	UCACAUU	ENST00000395824.1|ZNF287|ENSG00000141040.10|zinc finger protein 287 	ENST00000448349.2|ZNF287|ENSG00000141040.10|zinc finger protein 287 	ENST00000395825.3|ZNF287|ENSG00000141040.10|zinc finger protein 287
hg19_v2_chr9_+_129622904_129622956	0.0363648	UCACAUU	ENST00000319119.4|ZBTB34|ENSG00000177125.5|zinc finger and BTB domain containing 34
hg19_v2_chr7_-_120498357_120498456	0.0363318	UCACAUU	ENST00000415871.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000222747.3|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000430985.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chr17_-_19771216_19771230	0.0361793	UCACAUU	ENST00000395544.4|ULK2|ENSG00000083290.15|unc-51 like autophagy activating kinase 2
hg19_v2_chr9_+_115249100_115249358	0.0356134	UCACAUU	ENST00000337530.6|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000374244.3|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000536272.1|KIAA1958|ENSG00000165185.10|KIAA1958
hg19_v2_chr5_-_95297678_95297775	0.0353264	UCACAUU	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chrX_-_132095419_132095426	0.0340693	UCACAUU	ENST00000370836.2|HS6ST2|ENSG00000171004.13|heparan sulfate 6-O-sulfotransferase 2 	ENST00000521489.1|HS6ST2|ENSG00000171004.13|heparan sulfate 6-O-sulfotransferase 2
hg19_v2_chr13_-_50367057_50367142	0.0334816	UCACAUU	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr4_+_159690218_159690290	0.0330813	UCACAUU	ENST00000264433.6|FNIP2|ENSG00000052795.8|folliculin interacting protein 2
hg19_v2_chr3_+_9404526_9404782	0.0328423	UCACAUU	ENST00000452837.2|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000417036.1|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000419437.1|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000345094.3|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000515662.2|THUMPD3|ENSG00000134077.11|THUMP domain containing 3
hg19_v2_chr12_-_96794143_96794264	0.0327601	UCACAUU	ENST00000543119.2|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr10_+_96162242_96162283	0.0325778	UCACAUU	ENST00000225235.4|TBC1D12|ENSG00000108239.8|TBC1 domain family, member 12
hg19_v2_chr7_-_127225620_127225679	0.0322695	UCACAUU	ENST00000321407.2|GCC1|ENSG00000179562.2|GRIP and coiled-coil domain containing 1
hg19_v2_chr1_+_218458625_218458660	0.032245	UCACAUU	ENST00000366932.3|RRP15|ENSG00000067533.5|ribosomal RNA processing 15 homolog (S. cerevisiae)
hg19_v2_chr5_-_150727111_150727151	0.0308559	UCACAUU	ENST00000335244.4|SLC36A2|ENSG00000186335.4|solute carrier family 36 (proton/amino acid symporter), member 2 	ENST00000521967.1|SLC36A2|ENSG00000186335.4|solute carrier family 36 (proton/amino acid symporter), member 2
hg19_v2_chr3_+_155588300_155588369	0.0307381	UCACAUU	ENST00000496455.2|GMPS|ENSG00000163655.11|guanine monphosphate synthase
hg19_v2_chr10_-_14590644_14590669	0.0302495	UCACAUU	ENST00000378470.1|FAM107B|ENSG00000065809.9|family with sequence similarity 107, member B
hg19_v2_chr11_+_12695944_12695989	0.030164	UCACAUU	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr11_-_32452357_32452363	0.0296429	UCACAUU	ENST00000379079.2|WT1|ENSG00000184937.8|Wilms tumor 1 	ENST00000530998.1|WT1|ENSG00000184937.8|Wilms tumor 1
hg19_v2_chr7_+_5938351_5938379	0.0291484	UCACAUU	ENST00000325974.6|CCZ1|ENSG00000122674.8|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
hg19_v2_chrX_+_9754461_9754496	0.0290802	UCACAUU	ENST00000380913.3|SHROOM2|ENSG00000146950.8|shroom family member 2
hg19_v2_chr11_-_86666427_86666450	0.0290699	UCACAUU	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr11_+_120195992_120196023	0.0289897	UCACAUU	ENST00000314475.2|TMEM136|ENSG00000181264.4|transmembrane protein 136 	ENST00000529187.1|TMEM136|ENSG00000181264.4|transmembrane protein 136
hg19_v2_chr10_-_118502070_118502085	0.0284141	UCACAUU	ENST00000369209.3|HSPA12A|ENSG00000165868.8|heat shock 70kDa protein 12A
hg19_v2_chr7_-_112430647_112430776	0.0278139	UCACAUU	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr6_-_116381918_116381977	0.0261765	UCACAUU	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr5_-_107717058_107717155	0.0259294	UCACAUU	ENST00000359660.5|FBXL17|ENSG00000145743.11|F-box and leucine-rich repeat protein 17
hg19_v2_chr4_+_144257915_144258009	0.0257979	UCACAUU	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr1_+_179923873_179923954	0.0254355	UCACAUU	ENST00000367607.3|CEP350|ENSG00000135837.11|centrosomal protein 350kDa 	ENST00000491495.2|CEP350|ENSG00000135837.11|centrosomal protein 350kDa
hg19_v2_chr1_+_100503643_100503677	0.0250636	UCACAUU	ENST00000370152.3|HIAT1|ENSG00000156875.9|hippocampus abundant transcript 1
hg19_v2_chr5_+_140201183_140201361	0.024925	UCACAUU	ENST00000529619.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000529859.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000378126.3|PCDHA5|ENSG00000204965.4|protocadherin alpha 5
hg19_v2_chr12_+_119419294_119419308	0.0248175	UCACAUU	ENST00000267260.4|SRRM4|ENSG00000139767.4|serine/arginine repetitive matrix 4
hg19_v2_chr5_-_127873659_127873735	0.0245622	UCACAUU	ENST00000262464.4|FBN2|ENSG00000138829.6|fibrillin 2
hg19_v2_chr3_-_79068594_79068627	0.0245089	UCACAUU	ENST00000436010.2|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr20_-_17949363_17949454	0.0238249	UCACAUU	ENST00000377759.4|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000606557.1|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000606602.1|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000486039.1|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000481323.1|SNX5|ENSG00000089006.12|sorting nexin 5
hg19_v2_chr2_+_179345173_179345221	0.0237269	UCACAUU	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr14_+_55518349_55518423	0.0237053	UCACAUU	ENST00000395468.4|MAPK1IP1L|ENSG00000168175.10|mitogen-activated protein kinase 1 interacting protein 1-like
hg19_v2_chr12_+_96588143_96588185	0.0235554	UCACAUU	ENST00000228741.3|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2) 	ENST00000547249.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr7_-_105029329_105029376	0.023538	UCACAUU	ENST00000393651.3|SRPK2|ENSG00000135250.12|SRSF protein kinase 2 	ENST00000460391.1|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr4_+_166248775_166248901	0.0228605	UCACAUU	ENST00000261507.6|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000507013.1|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000393766.2|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000504317.1|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1
hg19_v2_chr9_-_113800317_113800328	0.0222912	UCACAUU	ENST00000374431.3|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr9_+_36572851_36572932	0.0218936	UCACAUU	ENST00000298048.2|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000538311.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536987.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000545008.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536860.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536329.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000541717.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000543751.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase
hg19_v2_chr9_-_127905736_127905815	0.0218482	UCACAUU	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr2_-_160919112_160919162	0.0218087	UCACAUU	ENST00000283243.7|PLA2R1|ENSG00000153246.7|phospholipase A2 receptor 1, 180kDa 	ENST00000392771.1|PLA2R1|ENSG00000153246.7|phospholipase A2 receptor 1, 180kDa
hg19_v2_chr9_+_117373486_117373645	0.0216769	UCACAUU	ENST00000288502.4|C9orf91|ENSG00000157693.10|chromosome 9 open reading frame 91 	ENST00000374049.4|C9orf91|ENSG00000157693.10|chromosome 9 open reading frame 91
hg19_v2_chr9_+_32384617_32384709	0.0211177	UCACAUU	ENST00000379923.1|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000309951.6|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000541043.1|ACO1|ENSG00000122729.14|aconitase 1, soluble
hg19_v2_chr6_+_117002339_117002400	0.020825	UCACAUU	ENST00000413340.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000368564.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000356348.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6)
hg19_v2_chr1_+_164528866_164528877	0.0207665	UCACAUU	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr10_+_31608054_31608156	0.0203397	UCACAUU	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr8_+_20054878_20054950	0.0201176	UCACAUU	ENST00000276390.2|ATP6V1B2|ENSG00000147416.6|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 	ENST00000519667.1|ATP6V1B2|ENSG00000147416.6|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2
hg19_v2_chrX_+_27826107_27826107	0.0196935	UCACAUU	ENST00000356790.2|MAGEB10|ENSG00000177689.9|melanoma antigen family B, 10
hg19_v2_chr2_-_47168906_47168994	0.0196905	UCACAUU	ENST00000444761.2|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409147.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr9_+_110045537_110045572	0.0190443	UCACAUU	ENST00000358015.3|RAD23B|ENSG00000119318.8|RAD23 homolog B (S. cerevisiae)
hg19_v2_chr6_+_76458909_76458934	0.0189404	UCACAUU	ENST00000369981.3|MYO6|ENSG00000196586.9|myosin VI 	ENST00000369985.4|MYO6|ENSG00000196586.9|myosin VI
hg19_v2_chr20_-_524455_524466	0.0187365	UCACAUU	ENST00000349736.5|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide 	ENST00000217244.3|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide
hg19_v2_chr11_-_79151695_79151710	0.0186527	UCACAUU	ENST00000278550.7|TENM4|ENSG00000149256.10|teneurin transmembrane protein 4
hg19_v2_chr10_-_16563870_16564004	0.018239	UCACAUU	ENST00000298943.3|C1QL3|ENSG00000165985.8|complement component 1, q subcomponent-like 3
hg19_v2_chr5_-_141392538_141392606	0.0181927	UCACAUU	ENST00000503794.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000510194.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000504424.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000513454.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000458112.2|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000542860.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000503229.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000500692.2|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000311337.6|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000504139.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000505689.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1
hg19_v2_chr1_+_150337144_150337194	0.0175868	UCACAUU	ENST00000539519.1|RPRD2|ENSG00000163125.11|regulation of nuclear pre-mRNA domain containing 2 	ENST00000369067.3|RPRD2|ENSG00000163125.11|regulation of nuclear pre-mRNA domain containing 2 	ENST00000369068.4|RPRD2|ENSG00000163125.11|regulation of nuclear pre-mRNA domain containing 2
hg19_v2_chr1_+_24069642_24069646	0.0170279	UCACAUU	ENST00000418390.2|TCEB3|ENSG00000011007.8|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)
hg19_v2_chr6_-_52926539_52926668	0.0169426	UCACAUU	ENST00000350082.5|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase 	ENST00000356971.3|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase
hg19_v2_chr8_-_81083731_81083813	0.0168721	UCACAUU	ENST00000379096.5|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr17_-_56494713_56494851	0.0165538	UCACAUU	ENST00000407977.2|RNF43|ENSG00000108375.8|ring finger protein 43
hg19_v2_chr1_-_63153944_63154110	0.0164913	UCACAUU	ENST00000340370.5|DOCK7|ENSG00000116641.11|dedicator of cytokinesis 7 	ENST00000404627.2|DOCK7|ENSG00000116641.11|dedicator of cytokinesis 7 	ENST00000251157.5|DOCK7|ENSG00000116641.11|dedicator of cytokinesis 7
hg19_v2_chrX_-_40594755_40594809	0.0164492	UCACAUU	ENST00000324817.1|MED14|ENSG00000180182.6|mediator complex subunit 14
hg19_v2_chr5_-_76935513_76935513	0.0163015	UCACAUU	ENST00000306422.3|OTP|ENSG00000171540.6|orthopedia homeobox
hg19_v2_chr4_+_184020398_184020463	0.0157867	UCACAUU	ENST00000403733.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2 	ENST00000378925.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2
hg19_v2_chr6_-_34360413_34360453	0.0155782	UCACAUU	ENST00000607016.1|NUDT3|ENSG00000272325.1|nudix (nucleoside diphosphate linked moiety X)-type motif 3
hg19_v2_chr17_+_45608430_45608490	0.0145643	UCACAUU	ENST00000322157.4|NPEPPS|ENSG00000141279.11|aminopeptidase puromycin sensitive
hg19_v2_chr7_-_93204033_93204043	0.0145547	UCACAUU	ENST00000359558.2|CALCR|ENSG00000004948.9|calcitonin receptor 	ENST00000360249.4|CALCR|ENSG00000004948.9|calcitonin receptor 	ENST00000426151.1|CALCR|ENSG00000004948.9|calcitonin receptor
hg19_v2_chr18_-_78005231_78005435	0.0136331	UCACAUU	ENST00000470488.2|PARD6G|ENSG00000178184.11|par-6 family cell polarity regulator gamma 	ENST00000353265.3|PARD6G|ENSG00000178184.11|par-6 family cell polarity regulator gamma
hg19_v2_chr3_+_62304712_62304732	0.0133116	UCACAUU	ENST00000494481.1|C3orf14|ENSG00000114405.6|chromosome 3 open reading frame 14
hg19_v2_chr14_-_92572894_92572965	0.0130166	UCACAUU	ENST00000532032.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000506466.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000555381.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000557311.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554592.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554672.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000553491.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000556220.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000502250.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000503767.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000393287.5|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000340660.6|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000545170.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000429774.2|ATXN3|ENSG00000066427.17|ataxin 3
hg19_v2_chr7_+_69064300_69064342	0.0125294	UCACAUU	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr22_+_29279552_29279586	0.0125192	UCACAUU	ENST00000544604.2|ZNRF3|ENSG00000183579.11|zinc and ring finger 3
hg19_v2_chr3_-_47823298_47823423	0.0124658	UCACAUU	ENST00000254480.5|SMARCC1|ENSG00000173473.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v2_chr1_-_31196427_31196434	0.0123637	UCACAUU	ENST00000373765.4|MATN1|ENSG00000162510.5|matrilin 1, cartilage matrix protein
hg19_v2_chr4_+_128886532_128886576	0.0122882	UCACAUU	ENST00000444616.1|C4orf29|ENSG00000164074.10|chromosome 4 open reading frame 29 	ENST00000388795.5|C4orf29|ENSG00000164074.10|chromosome 4 open reading frame 29
hg19_v2_chrX_-_109561294_109561467	0.0122134	UCACAUU	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr12_+_22778009_22778112	0.012021	UCACAUU	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr15_+_40532058_40532072	0.0117623	UCACAUU	ENST00000260404.4|PAK6|ENSG00000137843.7|p21 protein (Cdc42/Rac)-activated kinase 6
hg19_v2_chr3_-_98312548_98312567	0.0117212	UCACAUU	ENST00000264193.2|CPOX|ENSG00000080819.2|coproporphyrinogen oxidase
hg19_v2_chr15_-_72410109_72410161	0.0116224	UCACAUU	ENST00000564571.1|MYO9A|ENSG00000066933.11|myosin IXA
hg19_v2_chr5_-_133747589_133747603	0.0111389	UCACAUU	ENST00000458198.2|CDKN2AIPNL|ENSG00000237190.3|CDKN2A interacting protein N-terminal like
hg19_v2_chr18_+_32558208_32558340	0.0110637	UCACAUU	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr16_+_81478775_81478895	0.010472	UCACAUU	ENST00000537098.3|CMIP|ENSG00000153815.12|c-Maf inducing protein
hg19_v2_chr12_+_27396901_27397108	0.0103305	UCACAUU	ENST00000541191.1|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like 	ENST00000389032.3|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like
hg19_v2_chr3_-_9291063_9291136	0.0102758	UCACAUU	ENST00000383836.3|SRGAP3|ENSG00000196220.11|SLIT-ROBO Rho GTPase activating protein 3
hg19_v2_chr4_+_17616253_17616275	0.010128	UCACAUU	ENST00000237380.7|MED28|ENSG00000118579.7|mediator complex subunit 28
hg19_v2_chr6_+_153019023_153019043	0.00965314	UCACAUU	ENST00000367245.5|MYCT1|ENSG00000120279.6|myc target 1 	ENST00000529453.1|MYCT1|ENSG00000120279.6|myc target 1
hg19_v2_chr1_-_240775447_240775462	0.00950421	UCACAUU	ENST00000318160.4|GREM2|ENSG00000180875.4|gremlin 2, DAN family BMP antagonist
hg19_v2_chr3_-_113233992_113234044	0.00935498	UCACAUU	ENST00000295872.4|SPICE1|ENSG00000163611.7|spindle and centriole associated protein 1 	ENST00000480527.1|SPICE1|ENSG00000163611.7|spindle and centriole associated protein 1
hg19_v2_chr4_+_84457250_84457268	0.00916618	UCACAUU	ENST00000395226.2|AGPAT9|ENSG00000138678.6|1-acylglycerol-3-phosphate O-acyltransferase 9
hg19_v2_chr10_-_125851961_125851970	0.00898142	UCACAUU	ENST00000346248.5|CHST15|ENSG00000182022.13|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
hg19_v2_chr13_-_46626847_46626899	0.00859664	UCACAUU	ENST00000242848.4|ZC3H13|ENSG00000123200.12|zinc finger CCCH-type containing 13 	ENST00000282007.3|ZC3H13|ENSG00000123200.12|zinc finger CCCH-type containing 13
hg19_v2_chr3_-_138665969_138665993	0.00850767	UCACAUU	ENST00000330315.3|FOXL2|ENSG00000183770.5|forkhead box L2
hg19_v2_chr2_-_224810070_224810104	0.00839993	UCACAUU	ENST00000429915.1|WDFY1|ENSG00000085449.10|WD repeat and FYVE domain containing 1 	ENST00000233055.4|WDFY1|ENSG00000085449.10|WD repeat and FYVE domain containing 1
hg19_v2_chr17_-_43487780_43487792	0.00823575	UCACAUU	ENST00000532038.1|ARHGAP27|ENSG00000159314.7|Rho GTPase activating protein 27 	ENST00000528677.1|ARHGAP27|ENSG00000159314.7|Rho GTPase activating protein 27
hg19_v2_chr5_+_137801160_137801179	0.00789222	UCACAUU	ENST00000239938.4|EGR1|ENSG00000120738.7|early growth response 1
hg19_v2_chr2_-_209119831_209119857	0.00751847	UCACAUU	ENST00000345146.2|IDH1|ENSG00000138413.9|isocitrate dehydrogenase 1 (NADP+), soluble
hg19_v2_chr2_+_163200598_163200667	0.0067995	UCACAUU	ENST00000437150.2|GCA|ENSG00000115271.6|grancalcin, EF-hand calcium binding protein 	ENST00000453113.2|GCA|ENSG00000115271.6|grancalcin, EF-hand calcium binding protein
hg19_v2_chr1_-_113161730_113161811	0.00673561	UCACAUU	ENST00000544629.1|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like 	ENST00000543570.1|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like 	ENST00000360743.4|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like 	ENST00000490067.1|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like 	ENST00000343210.7|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like 	ENST00000369666.1|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like
hg19_v2_chr15_+_74833518_74833567	0.00634557	UCACAUU	ENST00000346246.5|ARID3B|ENSG00000179361.13|AT rich interactive domain 3B (BRIGHT-like)
hg19_v2_chr18_+_59854480_59854551	0.00619554	UCACAUU	ENST00000256858.6|KIAA1468|ENSG00000134444.9|KIAA1468 	ENST00000398130.2|KIAA1468|ENSG00000134444.9|KIAA1468
hg19_v2_chr7_-_123197733_123197890	0.00558202	UCACAUU	ENST00000470123.1|NDUFA5|ENSG00000128609.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 	ENST00000471770.1|NDUFA5|ENSG00000128609.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
hg19_v2_chr14_-_39901618_39901704	0.00535874	UCACAUU	ENST00000554932.1|FBXO33|ENSG00000165355.7|F-box protein 33 	ENST00000298097.7|FBXO33|ENSG00000165355.7|F-box protein 33
hg19_v2_chr4_-_74124502_74124523	0.00530036	UCACAUU	ENST00000358602.4|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000330838.6|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000561029.1|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17
hg19_v2_chr12_+_19592602_19592648	0.00464341	UCACAUU	ENST00000398864.3|AEBP2|ENSG00000139154.10|AE binding protein 2 	ENST00000266508.9|AEBP2|ENSG00000139154.10|AE binding protein 2
hg19_v2_chr19_-_58662139_58662182	0.00450012	UCACAUU	ENST00000598312.1|ZNF329|ENSG00000181894.10|zinc finger protein 329
hg19_v2_chr10_+_17851362_17851362	0.00441392	UCACAUU	ENST00000331429.2|MRC1L1|ENSG00000183748.4|cDNA FLJ56855, highly similar to Macrophage mannose receptor 1  	ENST00000457317.1|MRC1L1|ENSG00000183748.4|cDNA FLJ56855, highly similar to Macrophage mannose receptor 1
hg19_v2_chr2_-_164592497_164592573	0.00438854	UCACAUU	ENST00000333129.3|FIGN|ENSG00000182263.9|fidgetin 	ENST00000409634.1|FIGN|ENSG00000182263.9|fidgetin
hg19_v2_chr10_-_102279586_102279711	0.00424271	UCACAUU	ENST00000370345.3|SEC31B|ENSG00000075826.12|SEC31 homolog B (S. cerevisiae) 	ENST00000451524.1|SEC31B|ENSG00000075826.12|SEC31 homolog B (S. cerevisiae) 	ENST00000370329.5|SEC31B|ENSG00000075826.12|SEC31 homolog B (S. cerevisiae)
hg19_v2_chr4_+_39699664_39699772	0.00416958	UCACAUU	ENST00000261427.5|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000510934.1|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000295963.6|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K
hg19_v2_chr5_+_55033845_55033870	0.00415349	UCACAUU	ENST00000353507.5|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 	ENST00000514278.2|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 	ENST00000505374.1|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 	ENST00000506511.1|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg19_v2_chr20_+_43991668_43991853	0.00410662	UCACAUU	ENST00000243918.5|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) 	ENST00000426004.1|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
hg19_v2_chr5_-_178054105_178054119	0.00389664	UCACAUU	ENST00000316308.4|CLK4|ENSG00000113240.8|CDC-like kinase 4
hg19_v2_chr5_+_126112794_126112928	0.00381043	UCACAUU	ENST00000261366.5|LMNB1|ENSG00000113368.7|lamin B1 	ENST00000395354.1|LMNB1|ENSG00000113368.7|lamin B1
hg19_v2_chr9_+_133454943_133455020	0.00356742	UCACAUU	ENST00000319725.9|FUBP3|ENSG00000107164.15|far upstream element (FUSE) binding protein 3
hg19_v2_chrX_+_46433193_46433237	0.00351751	UCACAUU	ENST00000276055.3|CHST7|ENSG00000147119.3|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7
hg19_v2_chr2_-_201936302_201936416	0.0030898	UCACAUU	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr17_-_62502639_62502849	0.00304082	UCACAUU	ENST00000225792.5|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000581697.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000584279.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000577922.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr14_-_80677970_80678051	0.00250746	UCACAUU	ENST00000438257.4|DIO2|ENSG00000211448.7|deiodinase, iodothyronine, type II
hg19_v2_chr14_+_74960423_74960479	0.00250069	UCACAUU	ENST00000556816.1|ISCA2|ENSG00000165898.9|iron-sulfur cluster assembly 2 	ENST00000298818.8|ISCA2|ENSG00000165898.9|iron-sulfur cluster assembly 2 	ENST00000554924.1|ISCA2|ENSG00000165898.9|iron-sulfur cluster assembly 2
hg19_v2_chr8_+_11141925_11141937	0.00211276	UCACAUU	ENST00000221086.3|MTMR9|ENSG00000104643.5|myotubularin related protein 9
hg19_v2_chr1_+_112938803_112938860	0.00204886	UCACAUU	ENST00000271277.6|CTTNBP2NL|ENSG00000143079.10|CTTNBP2 N-terminal like
hg19_v2_chr6_+_117586713_117586737	0.00201907	UCACAUU	ENST00000352536.3|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila) 	ENST00000326274.5|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila)
hg19_v2_chr9_+_114423615_114423661	0.0020172	UCACAUU	ENST00000374293.4|GNG10|ENSG00000242616.3|guanine nucleotide binding protein (G protein), gamma 10
hg19_v2_chr22_-_46659219_46659244	0.0019243	UCACAUU	ENST00000253255.5|PKDREJ|ENSG00000130943.5|polycystin (PKD) family receptor for egg jelly
hg19_v2_chr10_-_101989315_101989376	0.00173226	UCACAUU	ENST00000370397.7|CHUK|ENSG00000213341.6|conserved helix-loop-helix ubiquitous kinase
hg19_v2_chr10_-_98945677_98945729	0.00160579	UCACAUU	ENST00000266058.4|SLIT1|ENSG00000187122.12|slit homolog 1 (Drosophila) 	ENST00000371041.3|SLIT1|ENSG00000187122.12|slit homolog 1 (Drosophila)
hg19_v2_chr2_+_42275153_42275171	0.000979083	UCACAUU	ENST00000294964.5|PKDCC|ENSG00000162878.8|protein kinase domain containing, cytoplasmic
hg19_v2_chr3_-_47205457_47205492	0.000597317	UCACAUU	ENST00000409792.3|SETD2|ENSG00000181555.15|SET domain containing 2
