hg19_v2_chr5_-_179780312_179780387	1.09979	UCACAGU	ENST00000253778.8|GFPT2|ENSG00000131459.8|glutamine-fructose-6-phosphate transaminase 2
hg19_v2_chr15_+_41221536_41221591	1.02946	UCACAGU	ENST00000249749.5|DLL4|ENSG00000128917.5|delta-like 4 (Drosophila)
hg19_v2_chr16_+_1031762_1031808	0.851351	UCACAGU	ENST00000293894.3|SOX8|ENSG00000005513.9|SRY (sex determining region Y)-box 8
hg19_v2_chr6_+_19837592_19837621	0.786956	UCACAGU	ENST00000378700.3|ID4|ENSG00000172201.6|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
hg19_v2_chr2_+_155554797_155554837	0.7372	UCACAGU	ENST00000295101.2|KCNJ3|ENSG00000162989.3|potassium inwardly-rectifying channel, subfamily J, member 3
hg19_v2_chr5_+_52285144_52285166	0.70499	UCACAGU	ENST00000296585.5|ITGA2|ENSG00000164171.6|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
hg19_v2_chr4_-_177713788_177713881	0.68884	UCACAGU	ENST00000280193.2|VEGFC|ENSG00000150630.2|vascular endothelial growth factor C
hg19_v2_chr6_+_126112001_126112062	0.624895	UCACAGU	ENST00000392477.2|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7
hg19_v2_chr1_+_40420802_40420836	0.612819	UCACAGU	ENST00000372811.5|MFSD2A|ENSG00000168389.13|major facilitator superfamily domain containing 2A 	ENST00000420632.2|MFSD2A|ENSG00000168389.13|major facilitator superfamily domain containing 2A 	ENST00000434861.1|MFSD2A|ENSG00000168389.13|major facilitator superfamily domain containing 2A 	ENST00000372809.5|MFSD2A|ENSG00000168389.13|major facilitator superfamily domain containing 2A
hg19_v2_chr19_+_51815102_51815102	0.593343	UCACAGU	ENST00000270642.8|IGLON5|ENSG00000142549.9|IgLON family member 5
hg19_v2_chr9_-_38069208_38069267	0.554101	UCACAGU	ENST00000377707.3|SHB|ENSG00000107338.8|Src homology 2 domain containing adaptor protein B 	ENST00000377700.4|SHB|ENSG00000107338.8|Src homology 2 domain containing adaptor protein B
hg19_v2_chr3_+_51575596_51575596	0.549348	UCACAGU	ENST00000409535.2|RAD54L2|ENSG00000164080.9|RAD54-like 2 (S. cerevisiae)
hg19_v2_chr2_+_5832799_5832799	0.543443	UCACAGU	ENST00000322002.3|SOX11|ENSG00000176887.5|SRY (sex determining region Y)-box 11
hg19_v2_chr19_+_48898132_48898132	0.535963	UCACAGU	ENST00000263269.3|GRIN2D|ENSG00000105464.3|glutamate receptor, ionotropic, N-methyl D-aspartate 2D
hg19_v2_chr5_-_121413974_121413986	0.513031	UCACAGU	ENST00000231004.4|LOX|ENSG00000113083.8|lysyl oxidase
hg19_v2_chr12_-_93835665_93835750	0.479426	UCACAGU	ENST00000552442.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N 	ENST00000550657.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N
hg19_v2_chr1_+_205473720_205473732	0.475314	UCACAGU	ENST00000429964.2|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18 	ENST00000506784.1|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18 	ENST00000360066.2|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18
hg19_v2_chr16_-_48644061_48644141	0.466863	UCACAGU	ENST00000262384.3|N4BP1|ENSG00000102921.3|NEDD4 binding protein 1
hg19_v2_chr19_+_1286097_1286153	0.459774	UCACAGU	ENST00000215368.2|EFNA2|ENSG00000099617.2|ephrin-A2
hg19_v2_chr8_+_40010989_40011008	0.447233	UCACAGU	ENST00000315792.3|C8orf4|ENSG00000176907.3|chromosome 8 open reading frame 4
hg19_v2_chr5_-_38595498_38595514	0.446976	UCACAGU	ENST00000263409.4|LIFR|ENSG00000113594.5|leukemia inhibitory factor receptor alpha
hg19_v2_chr1_+_15736359_15736463	0.446774	UCACAGU	ENST00000375980.4|EFHD2|ENSG00000142634.8|EF-hand domain family, member D2
hg19_v2_chr12_-_26278030_26278060	0.441723	UCACAGU	ENST00000242728.4|BHLHE41|ENSG00000123095.5|basic helix-loop-helix family, member e41
hg19_v2_chr1_-_200992827_200992867	0.429317	UCACAGU	ENST00000332129.2|KIF21B|ENSG00000116852.10|kinesin family member 21B 	ENST00000422435.2|KIF21B|ENSG00000116852.10|kinesin family member 21B
hg19_v2_chr9_+_137533615_137533660	0.424445	UCACAGU	ENST00000371817.3|COL5A1|ENSG00000130635.11|collagen, type V, alpha 1
hg19_v2_chr14_+_55034599_55034637	0.421542	UCACAGU	ENST00000392067.3|SAMD4A|ENSG00000020577.9|sterile alpha motif domain containing 4A 	ENST00000357634.3|SAMD4A|ENSG00000020577.9|sterile alpha motif domain containing 4A
hg19_v2_chr7_+_116312411_116312502	0.408457	UCACAGU	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr5_-_157002775_157002790	0.406114	UCACAGU	ENST00000257527.4|ADAM19|ENSG00000135074.11|ADAM metallopeptidase domain 19
hg19_v2_chr21_-_39288743_39288765	0.402777	UCACAGU	ENST00000609713.1|KCNJ6|ENSG00000157542.8|potassium inwardly-rectifying channel, subfamily J, member 6
hg19_v2_chr2_-_235405679_235405739	0.400686	UCACAGU	ENST00000390645.2|ARL4C|ENSG00000188042.5|ADP-ribosylation factor-like 4C
hg19_v2_chr17_+_45608430_45608490	0.39428	UCACAGU	ENST00000322157.4|NPEPPS|ENSG00000141279.11|aminopeptidase puromycin sensitive
hg19_v2_chr13_+_52158610_52158654	0.378634	UCACAGU	ENST00000298125.5|WDFY2|ENSG00000139668.7|WD repeat and FYVE domain containing 2
hg19_v2_chr15_-_56209306_56209344	0.377734	UCACAGU	ENST00000506154.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000338963.2|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000508342.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
hg19_v2_chr12_-_54779511_54779577	0.37751	UCACAGU	ENST00000551109.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A 	ENST00000546970.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A
hg19_v2_chr12_-_54813229_54813273	0.367633	UCACAGU	ENST00000293379.4|ITGA5|ENSG00000161638.6|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
hg19_v2_chr3_+_152879985_152880038	0.365915	UCACAGU	ENST00000323534.2|RAP2B|ENSG00000181467.2|RAP2B, member of RAS oncogene family
hg19_v2_chr19_-_46234119_46234189	0.365373	UCACAGU	ENST00000317683.3|FBXO46|ENSG00000177051.5|F-box protein 46
hg19_v2_chr19_+_51152702_51152702	0.359458	UCACAGU	ENST00000425202.1|C19orf81|ENSG00000235034.2|chromosome 19 open reading frame 81
hg19_v2_chr8_-_141645645_141645783	0.356708	UCACAGU	ENST00000519980.1|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2 	ENST00000220592.5|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2
hg19_v2_chr2_-_200322723_200322819	0.352754	UCACAGU	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr7_+_100210133_100210214	0.349808	UCACAGU	ENST00000393950.2|MOSPD3|ENSG00000106330.7|motile sperm domain containing 3 	ENST00000424091.2|MOSPD3|ENSG00000106330.7|motile sperm domain containing 3
hg19_v2_chr11_-_45687128_45687214	0.349198	UCACAGU	ENST00000308064.2|CHST1|ENSG00000175264.3|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
hg19_v2_chr16_-_73082274_73082274	0.346222	UCACAGU	ENST00000268489.5|ZFHX3|ENSG00000140836.10|zinc finger homeobox 3
hg19_v2_chr9_+_129622904_129622956	0.345271	UCACAGU	ENST00000319119.4|ZBTB34|ENSG00000177125.5|zinc finger and BTB domain containing 34
hg19_v2_chr4_+_160188889_160188968	0.341519	UCACAGU	ENST00000264431.4|RAPGEF2|ENSG00000109756.4|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr22_+_46067678_46067771	0.341071	UCACAGU	ENST00000381061.4|ATXN10|ENSG00000130638.11|ataxin 10 	ENST00000252934.5|ATXN10|ENSG00000130638.11|ataxin 10
hg19_v2_chr2_+_192542850_192542872	0.339549	UCACAGU	ENST00000410026.2|NABP1|ENSG00000173559.8|nucleic acid binding protein 1
hg19_v2_chr2_-_27718052_27718127	0.337735	UCACAGU	ENST00000264703.3|FNDC4|ENSG00000115226.5|fibronectin type III domain containing 4
hg19_v2_chr5_-_111093406_111093458	0.335993	UCACAGU	ENST00000379671.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr6_-_37665751_37665781	0.333786	UCACAGU	ENST00000297153.7|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1 	ENST00000434837.3|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1
hg19_v2_chr12_-_49351303_49351334	0.330358	UCACAGU	ENST00000256682.4|ARF3|ENSG00000134287.5|ADP-ribosylation factor 3
hg19_v2_chr8_-_127570603_127570648	0.330293	UCACAGU	ENST00000304916.3|FAM84B|ENSG00000168672.3|family with sequence similarity 84, member B
hg19_v2_chr8_-_10588010_10588030	0.328793	UCACAGU	ENST00000304501.1|SOX7|ENSG00000171056.6|SRY (sex determining region Y)-box 7
hg19_v2_chr1_+_39456895_39456986	0.328747	UCACAGU	ENST00000432648.3|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000446189.2|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000372984.4|AKIRIN1|ENSG00000174574.11|akirin 1
hg19_v2_chr11_-_115375107_115375283	0.324178	UCACAGU	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr2_+_23608064_23608088	0.324163	UCACAGU	ENST00000486442.1|KLHL29|ENSG00000119771.10|kelch-like family member 29
hg19_v2_chr20_-_48770174_48770243	0.322055	UCACAGU	ENST00000341698.2|TMEM189-UBE2V1|ENSG00000124208.16|TMEM189-UBE2V1 readthrough
hg19_v2_chr4_-_80994210_80994284	0.318909	UCACAGU	ENST00000403729.2|ANTXR2|ENSG00000163297.12|anthrax toxin receptor 2
hg19_v2_chr8_-_41166953_41167016	0.310496	UCACAGU	ENST00000220772.3|SFRP1|ENSG00000104332.7|secreted frizzled-related protein 1
hg19_v2_chr14_+_67999999_68000036	0.309611	UCACAGU	ENST00000329153.5|PLEKHH1|ENSG00000054690.9|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
hg19_v2_chr10_+_8096631_8096660	0.308819	UCACAGU	ENST00000379328.3|GATA3|ENSG00000107485.11|GATA binding protein 3
hg19_v2_chr1_-_179198702_179198741	0.306755	UCACAGU	ENST00000502732.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chr1_-_222885770_222885866	0.300307	UCACAGU	ENST00000355727.2|AIDA|ENSG00000186063.8|axin interactor, dorsalization associated 	ENST00000340020.6|AIDA|ENSG00000186063.8|axin interactor, dorsalization associated
hg19_v2_chr12_+_70760056_70760085	0.297941	UCACAGU	ENST00000258111.4|KCNMB4|ENSG00000135643.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg19_v2_chr6_-_99873145_99873207	0.296142	UCACAGU	ENST00000369239.5|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein 	ENST00000438806.1|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein
hg19_v2_chr12_-_95611149_95611249	0.292591	UCACAGU	ENST00000549499.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000343958.4|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000546711.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6
hg19_v2_chr8_-_37756972_37757022	0.290693	UCACAGU	ENST00000330843.4|RAB11FIP1|ENSG00000156675.11|RAB11 family interacting protein 1 (class I) 	ENST00000522727.1|RAB11FIP1|ENSG00000156675.11|RAB11 family interacting protein 1 (class I) 	ENST00000287263.4|RAB11FIP1|ENSG00000156675.11|RAB11 family interacting protein 1 (class I)
hg19_v2_chr19_-_43969796_43969813	0.290134	UCACAGU	ENST00000244333.3|LYPD3|ENSG00000124466.8|LY6/PLAUR domain containing 3
hg19_v2_chr14_-_61116168_61116180	0.285947	UCACAGU	ENST00000247182.6|SIX1|ENSG00000126778.7|SIX homeobox 1
hg19_v2_chr19_+_2164126_2164168	0.285168	UCACAGU	ENST00000398665.3|DOT1L|ENSG00000104885.13|DOT1-like histone H3K79 methyltransferase
hg19_v2_chr16_-_12009735_12009793	0.283948	UCACAGU	ENST00000439887.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1 	ENST00000434724.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1
hg19_v2_chr8_-_74791051_74791145	0.282976	UCACAGU	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr1_+_206680879_206680896	0.282561	UCACAGU	ENST00000355294.4|RASSF5|ENSG00000136653.15|Ras association (RalGDS/AF-6) domain family member 5 	ENST00000367117.3|RASSF5|ENSG00000136653.15|Ras association (RalGDS/AF-6) domain family member 5
hg19_v2_chr2_+_206547215_206547232	0.28206	UCACAGU	ENST00000360409.3|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000540178.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000540841.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000355117.4|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000450507.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000417189.1|NRP2|ENSG00000118257.12|neuropilin 2
hg19_v2_chr9_-_127905736_127905815	0.281177	UCACAGU	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr3_-_128212016_128212051	0.278474	UCACAGU	ENST00000498200.1|GATA2|ENSG00000179348.7|GATA binding protein 2 	ENST00000341105.2|GATA2|ENSG00000179348.7|GATA binding protein 2
hg19_v2_chr5_+_156887027_156887059	0.276761	UCACAGU	ENST00000435489.2|NIPAL4|ENSG00000172548.10|NIPA-like domain containing 4 	ENST00000311946.7|NIPAL4|ENSG00000172548.10|NIPA-like domain containing 4
hg19_v2_chr15_+_64680003_64680063	0.275723	UCACAGU	ENST00000261884.3|TRIP4|ENSG00000103671.5|thyroid hormone receptor interactor 4
hg19_v2_chr8_-_124553437_124553453	0.273226	UCACAGU	ENST00000517956.1|FBXO32|ENSG00000156804.3|F-box protein 32 	ENST00000443022.2|FBXO32|ENSG00000156804.3|F-box protein 32
hg19_v2_chr16_-_4292071_4292088	0.270999	UCACAGU	ENST00000399609.3|SRL|ENSG00000185739.9|sarcalumenin
hg19_v2_chr1_-_23886285_23886336	0.269274	UCACAGU	ENST00000374561.5|ID3|ENSG00000117318.8|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg19_v2_chr11_-_31839488_31839515	0.266242	UCACAGU	ENST00000419022.1|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379132.3|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379129.2|PAX6|ENSG00000007372.16|paired box 6
hg19_v2_chr1_+_955448_955508	0.265963	UCACAGU	ENST00000379370.2|AGRN|ENSG00000188157.9|agrin
hg19_v2_chrX_+_17393543_17393543	0.263471	UCACAGU	ENST00000380060.3|NHS|ENSG00000188158.10|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg19_v2_chr11_+_72929319_72929344	0.262985	UCACAGU	ENST00000393597.2|P2RY2|ENSG00000175591.7|purinergic receptor P2Y, G-protein coupled, 2 	ENST00000311131.2|P2RY2|ENSG00000175591.7|purinergic receptor P2Y, G-protein coupled, 2
hg19_v2_chr6_+_138188551_138188719	0.261628	UCACAGU	ENST00000237289.4|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3 	ENST00000433680.1|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3
hg19_v2_chr5_+_32585605_32585706	0.258304	UCACAGU	ENST00000265073.4|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000515355.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000502897.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000510442.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae)
hg19_v2_chr7_+_155250824_155250824	0.25676	UCACAGU	ENST00000297375.4|EN2|ENSG00000164778.4|engrailed homeobox 2
hg19_v2_chr2_+_74881355_74881397	0.25626	UCACAGU	ENST00000357877.2|SEMA4F|ENSG00000135622.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F
hg19_v2_chr2_-_39348137_39348212	0.25464	UCACAGU	ENST00000426016.1|SOS1|ENSG00000115904.8|son of sevenless homolog 1 (Drosophila)
hg19_v2_chr3_+_150804676_150804697	0.253865	UCACAGU	ENST00000474524.1|MED12L|ENSG00000144893.8|mediator complex subunit 12-like 	ENST00000273432.4|MED12L|ENSG00000144893.8|mediator complex subunit 12-like
hg19_v2_chr2_+_7057523_7057613	0.253483	UCACAGU	ENST00000320892.6|RNF144A|ENSG00000151692.10|ring finger protein 144A
hg19_v2_chr22_-_39239987_39240041	0.251679	UCACAGU	ENST00000333039.2|NPTXR|ENSG00000221890.2|neuronal pentraxin receptor
hg19_v2_chr1_+_199996702_199996732	0.246369	UCACAGU	ENST00000367362.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr3_-_129407535_129407575	0.244503	UCACAGU	ENST00000432054.2|TMCC1|ENSG00000172765.12|transmembrane and coiled-coil domain family 1
hg19_v2_chr19_+_4229495_4229539	0.244414	UCACAGU	ENST00000221847.5|EBI3|ENSG00000105246.5|Epstein-Barr virus induced 3
hg19_v2_chr10_+_22605304_22605372	0.241617	UCACAGU	ENST00000475460.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000602390.1|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000456711.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000444869.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000489125.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough
hg19_v2_chr3_+_14444063_14444133	0.241128	UCACAGU	ENST00000454876.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000360861.3|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000416216.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6
hg19_v2_chr7_-_139876812_139876860	0.238893	UCACAGU	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr20_-_48729670_48729694	0.237869	UCACAGU	ENST00000371657.5|UBE2V1|ENSG00000244687.7|ubiquitin-conjugating enzyme E2 variant 1
hg19_v2_chr10_+_64893039_64893128	0.235193	UCACAGU	ENST00000277746.6|NRBF2|ENSG00000148572.10|nuclear receptor binding factor 2 	ENST00000435510.2|NRBF2|ENSG00000148572.10|nuclear receptor binding factor 2
hg19_v2_chr13_-_79177673_79177701	0.233768	UCACAGU	ENST00000377208.5|POU4F1|ENSG00000152192.6|POU class 4 homeobox 1
hg19_v2_chr20_+_49348081_49348096	0.230984	UCACAGU	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr17_-_76713100_76713122	0.229652	UCACAGU	ENST00000585509.1|CYTH1|ENSG00000108669.12|cytohesin 1
hg19_v2_chr4_+_39699664_39699772	0.228231	UCACAGU	ENST00000261427.5|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000510934.1|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000295963.6|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K
hg19_v2_chr20_-_48770244_48770335	0.225621	UCACAGU	ENST00000371650.5|TMEM189|ENSG00000240849.6|transmembrane protein 189 	ENST00000371652.4|TMEM189|ENSG00000240849.6|transmembrane protein 189 	ENST00000557021.1|TMEM189|ENSG00000240849.6|transmembrane protein 189
hg19_v2_chr7_-_75368248_75368265	0.225564	UCACAGU	ENST00000434438.2|HIP1|ENSG00000127946.12|huntingtin interacting protein 1 	ENST00000336926.6|HIP1|ENSG00000127946.12|huntingtin interacting protein 1
hg19_v2_chr20_+_10199468_10199516	0.224058	UCACAGU	ENST00000254976.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa 	ENST00000304886.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa
hg19_v2_chr6_-_24911195_24911343	0.223989	UCACAGU	ENST00000259698.4|FAM65B|ENSG00000111913.11|family with sequence similarity 65, member B
hg19_v2_chr12_+_40787194_40787197	0.223462	UCACAGU	ENST00000425730.2|MUC19|ENSG00000205592.9|mucin 19, oligomeric 	ENST00000454784.4|MUC19|ENSG00000205592.9|mucin 19, oligomeric
hg19_v2_chr11_+_120081475_120081488	0.22147	UCACAGU	ENST00000328965.4|OAF|ENSG00000184232.4|OAF homolog (Drosophila)
hg19_v2_chr16_+_1756162_1756241	0.219453	UCACAGU	ENST00000250894.4|MAPK8IP3|ENSG00000138834.8|mitogen-activated protein kinase 8 interacting protein 3 	ENST00000356010.5|MAPK8IP3|ENSG00000138834.8|mitogen-activated protein kinase 8 interacting protein 3
hg19_v2_chr17_-_71228357_71228533	0.218606	UCACAGU	ENST00000583024.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000403627.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000405159.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000581110.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chr19_-_7293942_7294045	0.218488	UCACAGU	ENST00000341500.5|INSR|ENSG00000171105.9|insulin receptor 	ENST00000302850.5|INSR|ENSG00000171105.9|insulin receptor
hg19_v2_chr18_+_19749386_19749404	0.217915	UCACAGU	ENST00000269216.3|GATA6|ENSG00000141448.4|GATA binding protein 6
hg19_v2_chr20_+_23342783_23342957	0.215706	UCACAGU	ENST00000544236.1|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1 	ENST00000338121.5|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1 	ENST00000542987.1|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1 	ENST00000424216.1|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1
hg19_v2_chr14_+_33408449_33408525	0.215431	UCACAGU	ENST00000346562.2|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000341321.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000548645.1|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000356141.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000357798.5|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3
hg19_v2_chr17_+_27717415_27717618	0.215404	UCACAGU	ENST00000583121.1|TAOK1|ENSG00000160551.5|TAO kinase 1 	ENST00000261716.3|TAOK1|ENSG00000160551.5|TAO kinase 1
hg19_v2_chr22_-_37099555_37099603	0.211348	UCACAGU	ENST00000300105.6|CACNG2|ENSG00000166862.6|calcium channel, voltage-dependent, gamma subunit 2
hg19_v2_chrX_-_67653614_67653657	0.210635	UCACAGU	ENST00000355520.5|OPHN1|ENSG00000079482.11|oligophrenin 1
hg19_v2_chr11_+_35684288_35684353	0.210196	UCACAGU	ENST00000299413.5|TRIM44|ENSG00000166326.5|tripartite motif containing 44
hg19_v2_chr3_+_14989076_14989113	0.21005	UCACAGU	ENST00000413118.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2 	ENST00000425241.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2
hg19_v2_chr2_+_232260254_232260274	0.20855	UCACAGU	ENST00000287590.5|B3GNT7|ENSG00000156966.6|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
hg19_v2_chr1_+_23037323_23037463	0.205964	UCACAGU	ENST00000544305.1|EPHB2|ENSG00000133216.12|EPH receptor B2 	ENST00000374630.3|EPHB2|ENSG00000133216.12|EPH receptor B2 	ENST00000400191.3|EPHB2|ENSG00000133216.12|EPH receptor B2 	ENST00000374632.3|EPHB2|ENSG00000133216.12|EPH receptor B2
hg19_v2_chr6_+_37787262_37787291	0.205187	UCACAGU	ENST00000287218.4|ZFAND3|ENSG00000156639.7|zinc finger, AN1-type domain 3
hg19_v2_chr20_+_46130601_46130613	0.203627	UCACAGU	ENST00000341724.6|NCOA3|ENSG00000124151.14|nuclear receptor coactivator 3
hg19_v2_chr17_+_60536002_60536040	0.202713	UCACAGU	ENST00000582809.1|TLK2|ENSG00000146872.13|tousled-like kinase 2
hg19_v2_chr1_-_57045228_57045242	0.199459	UCACAGU	ENST00000371250.3|PPAP2B|ENSG00000162407.8|phosphatidic acid phosphatase type 2B
hg19_v2_chr10_-_91403625_91403649	0.19883	UCACAGU	ENST00000322191.6|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000342512.3|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000371774.2|PANK1|ENSG00000152782.12|pantothenate kinase 1
hg19_v2_chr13_+_49550015_49550070	0.197404	UCACAGU	ENST00000492622.2|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chrX_-_54384425_54384495	0.197076	UCACAGU	ENST00000375169.3|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3 	ENST00000354646.2|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3
hg19_v2_chr8_-_122653630_122653661	0.194191	UCACAGU	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr8_+_81397876_81397902	0.194079	UCACAGU	ENST00000430430.1|ZBTB10|ENSG00000205189.7|zinc finger and BTB domain containing 10
hg19_v2_chr9_-_134145880_134145952	0.193403	UCACAGU	ENST00000372269.3|FAM78A|ENSG00000126882.8|family with sequence similarity 78, member A 	ENST00000464831.1|FAM78A|ENSG00000126882.8|family with sequence similarity 78, member A
hg19_v2_chr5_-_139726181_139726216	0.192184	UCACAGU	ENST00000507104.1|HBEGF|ENSG00000113070.6|heparin-binding EGF-like growth factor 	ENST00000230990.6|HBEGF|ENSG00000113070.6|heparin-binding EGF-like growth factor
hg19_v2_chr1_+_206557366_206557368	0.190702	UCACAGU	ENST00000414007.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2 	ENST00000419187.2|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr22_+_21771656_21771693	0.190532	UCACAGU	ENST00000407464.2|HIC2|ENSG00000169635.5|hypermethylated in cancer 2
hg19_v2_chr9_+_137218362_137218426	0.189172	UCACAGU	ENST00000481739.1|RXRA|ENSG00000186350.8|retinoid X receptor, alpha
hg19_v2_chr17_+_38375574_38375615	0.187374	UCACAGU	ENST00000323571.4|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000585043.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000394103.3|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000536600.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2
hg19_v2_chr11_-_1771797_1771832	0.185844	UCACAGU	ENST00000340134.4|IFITM10|ENSG00000244242.1|interferon induced transmembrane protein 10
hg19_v2_chr2_-_9143786_9143942	0.185115	UCACAGU	ENST00000462696.1|MBOAT2|ENSG00000143797.7|membrane bound O-acyltransferase domain containing 2 	ENST00000305997.3|MBOAT2|ENSG00000143797.7|membrane bound O-acyltransferase domain containing 2
hg19_v2_chr17_+_56833184_56833249	0.185008	UCACAGU	ENST00000308249.2|PPM1E|ENSG00000175175.4|protein phosphatase, Mg2+/Mn2+ dependent, 1E
hg19_v2_chr18_-_45456930_45456970	0.184788	UCACAGU	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr19_-_6424783_6424805	0.183465	UCACAGU	ENST00000398148.3|KHSRP|ENSG00000088247.11|KH-type splicing regulatory protein
hg19_v2_chr12_-_75905374_75905420	0.18317	UCACAGU	ENST00000438169.2|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast) 	ENST00000229214.4|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast)
hg19_v2_chr17_-_80056099_80056208	0.183074	UCACAGU	ENST00000306749.2|FASN|ENSG00000169710.6|fatty acid synthase
hg19_v2_chr3_-_124774802_124774852	0.182125	UCACAGU	ENST00000311127.4|HEG1|ENSG00000173706.8|heart development protein with EGF-like domains 1
hg19_v2_chr16_+_69599861_69599887	0.180781	UCACAGU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr2_+_113403434_113403496	0.180139	UCACAGU	ENST00000272542.3|SLC20A1|ENSG00000144136.6|solute carrier family 20 (phosphate transporter), member 1
hg19_v2_chr2_+_108443388_108443393	0.179041	UCACAGU	ENST00000354986.4|RGPD4|ENSG00000196862.8|RANBP2-like and GRIP domain containing 4 	ENST00000408999.3|RGPD4|ENSG00000196862.8|RANBP2-like and GRIP domain containing 4
hg19_v2_chrX_+_49687216_49687265	0.178482	UCACAGU	ENST00000376088.3|CLCN5|ENSG00000171365.11|chloride channel, voltage-sensitive 5
hg19_v2_chr15_-_41408409_41408552	0.178091	UCACAGU	ENST00000361937.3|INO80|ENSG00000128908.11|INO80 complex subunit
hg19_v2_chr16_+_2587998_2588011	0.177583	UCACAGU	ENST00000441549.3|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1 	ENST00000268673.7|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1
hg19_v2_chr1_+_76540386_76540445	0.176591	UCACAGU	ENST00000328299.3|ST6GALNAC3|ENSG00000184005.9|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg19_v2_chr12_+_8234807_8234855	0.175037	UCACAGU	ENST00000339754.5|NECAP1|ENSG00000089818.12|NECAP endocytosis associated 1
hg19_v2_chr10_-_94003003_94003013	0.175011	UCACAGU	ENST00000412050.4|CPEB3|ENSG00000107864.10|cytoplasmic polyadenylation element binding protein 3
hg19_v2_chr5_-_115910630_115910657	0.174634	UCACAGU	ENST00000343348.6|SEMA6A|ENSG00000092421.12|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg19_v2_chr2_-_37193606_37193633	0.17463	UCACAGU	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr2_+_238875597_238875724	0.174583	UCACAGU	ENST00000272930.4|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000448502.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000416292.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000409633.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000414443.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000409953.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative) 	ENST00000409332.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative)
hg19_v2_chr1_+_160370344_160370406	0.172997	UCACAGU	ENST00000368061.2|VANGL2|ENSG00000162738.5|VANGL planar cell polarity protein 2
hg19_v2_chr1_-_47655686_47655743	0.172586	UCACAGU	ENST00000294338.2|PDZK1IP1|ENSG00000162366.3|PDZK1 interacting protein 1
hg19_v2_chr3_-_134093395_134093436	0.171871	UCACAGU	ENST00000249883.5|AMOTL2|ENSG00000114019.10|angiomotin like 2
hg19_v2_chr6_+_391739_391759	0.170167	UCACAGU	ENST00000380956.4|IRF4|ENSG00000137265.10|interferon regulatory factor 4
hg19_v2_chr15_+_54305101_54305101	0.166924	UCACAGU	ENST00000260323.11|UNC13C|ENSG00000137766.12|unc-13 homolog C (C. elegans) 	ENST00000545554.1|UNC13C|ENSG00000137766.12|unc-13 homolog C (C. elegans) 	ENST00000537900.1|UNC13C|ENSG00000137766.12|unc-13 homolog C (C. elegans)
hg19_v2_chr2_+_46524537_46524553	0.166018	UCACAGU	ENST00000263734.3|EPAS1|ENSG00000116016.9|endothelial PAS domain protein 1
hg19_v2_chr18_-_29522989_29523104	0.164646	UCACAGU	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr19_-_13617247_13617319	0.163634	UCACAGU	ENST00000573710.2|CACNA1A|ENSG00000141837.14|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
hg19_v2_chr13_-_41240717_41240735	0.16363	UCACAGU	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr12_+_50135588_50135605	0.162963	UCACAGU	ENST00000423828.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000550445.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6
hg19_v2_chr4_-_7873981_7874044	0.16182	UCACAGU	ENST00000360265.4|AFAP1|ENSG00000196526.6|actin filament associated protein 1
hg19_v2_chrX_-_46618490_46618622	0.159426	UCACAGU	ENST00000328306.4|SLC9A7|ENSG00000065923.5|solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7
hg19_v2_chr17_+_11924129_11924200	0.159348	UCACAGU	ENST00000353533.5|MAP2K4|ENSG00000065559.10|mitogen-activated protein kinase kinase 4 	ENST00000415385.3|MAP2K4|ENSG00000065559.10|mitogen-activated protein kinase kinase 4
hg19_v2_chr7_-_5463175_5463195	0.15904	UCACAGU	ENST00000399537.4|TNRC18|ENSG00000182095.10|trinucleotide repeat containing 18 	ENST00000430969.1|TNRC18|ENSG00000182095.10|trinucleotide repeat containing 18
hg19_v2_chr3_-_53381539_53381654	0.157275	UCACAGU	ENST00000606822.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000294241.6|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000607628.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A
hg19_v2_chr1_-_78148324_78148365	0.156808	UCACAGU	ENST00000370801.3|ZZZ3|ENSG00000036549.8|zinc finger, ZZ-type containing 3 	ENST00000433749.1|ZZZ3|ENSG00000036549.8|zinc finger, ZZ-type containing 3
hg19_v2_chr14_+_51706886_51707006	0.156511	UCACAGU	ENST00000457354.2|TMX1|ENSG00000139921.8|thioredoxin-related transmembrane protein 1
hg19_v2_chr19_+_7968728_7968781	0.156331	UCACAGU	ENST00000397981.3|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7 	ENST00000545011.1|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7 	ENST00000397983.3|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7 	ENST00000397979.3|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7
hg19_v2_chr14_+_50359773_50359850	0.156191	UCACAGU	ENST00000298316.5|ARF6|ENSG00000165527.5|ADP-ribosylation factor 6
hg19_v2_chr17_-_37557846_37557920	0.155265	UCACAGU	ENST00000394294.3|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000583610.1|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000264658.6|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20
hg19_v2_chr10_+_112257596_112257634	0.154957	UCACAGU	ENST00000369583.3|DUSP5|ENSG00000138166.5|dual specificity phosphatase 5
hg19_v2_chr21_+_33245548_33245628	0.15466	UCACAGU	ENST00000270112.2|HUNK|ENSG00000142149.4|hormonally up-regulated Neu-associated kinase
hg19_v2_chr10_-_32636106_32636150	0.154108	UCACAGU	ENST00000263062.8|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila) 	ENST00000319778.6|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr2_-_232645977_232646009	0.153323	UCACAGU	ENST00000409772.1|PDE6D|ENSG00000156973.9|phosphodiesterase 6D, cGMP-specific, rod, delta
hg19_v2_chr12_+_133066137_133066137	0.153139	UCACAGU	ENST00000434748.2|FBRSL1|ENSG00000112787.8|fibrosin-like 1
hg19_v2_chr5_+_65440032_65440099	0.152892	UCACAGU	ENST00000334121.6|SREK1|ENSG00000153914.11|splicing regulatory glutamine/lysine-rich protein 1
hg19_v2_chr3_+_137906109_137906153	0.152883	UCACAGU	ENST00000481646.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000469044.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000491704.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000461600.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8
hg19_v2_chr8_-_98290087_98290197	0.152663	UCACAGU	ENST00000322128.3|TSPYL5|ENSG00000180543.3|TSPY-like 5
hg19_v2_chr2_+_85132749_85132788	0.15238	UCACAGU	ENST00000233143.4|TMSB10|ENSG00000034510.4|thymosin beta 10
hg19_v2_chr19_-_2721412_2721419	0.152201	UCACAGU	ENST00000323469.4|DIRAS1|ENSG00000176490.4|DIRAS family, GTP-binding RAS-like 1
hg19_v2_chr17_-_73389737_73389765	0.152124	UCACAGU	ENST00000392563.1|GRB2|ENSG00000177885.9|growth factor receptor-bound protein 2
hg19_v2_chr12_-_120687948_120687971	0.147448	UCACAGU	ENST00000458477.2|PXN|ENSG00000089159.11|paxillin
hg19_v2_chr17_+_57970469_57970600	0.146955	UCACAGU	ENST00000443572.2|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000406116.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000225577.4|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000393021.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1
hg19_v2_chr4_+_52709229_52709345	0.1467	UCACAGU	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr1_-_95007193_95007356	0.142462	UCACAGU	ENST00000370207.4|F3|ENSG00000117525.9|coagulation factor III (thromboplastin, tissue factor) 	ENST00000334047.7|F3|ENSG00000117525.9|coagulation factor III (thromboplastin, tissue factor)
hg19_v2_chr17_-_36831156_36831187	0.140869	UCACAGU	ENST00000325814.5|C17orf96|ENSG00000179294.5|chromosome 17 open reading frame 96
hg19_v2_chr9_-_37576226_37576250	0.140374	UCACAGU	ENST00000432825.2|FBXO10|ENSG00000147912.8|F-box protein 10
hg19_v2_chr8_+_134203273_134203289	0.139499	UCACAGU	ENST00000250160.6|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1
hg19_v2_chr16_-_75467318_75467408	0.138521	UCACAGU	ENST00000283882.3|CFDP1|ENSG00000153774.4|craniofacial development protein 1
hg19_v2_chr5_+_138678131_138678169	0.13831	UCACAGU	ENST00000394795.2|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000510080.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr10_-_62149433_62149488	0.136301	UCACAGU	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr13_+_28813645_28813770	0.13422	UCACAGU	ENST00000282391.5|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr3_+_122785895_122786001	0.133706	UCACAGU	ENST00000316218.7|PDIA5|ENSG00000065485.13|protein disulfide isomerase family A, member 5
hg19_v2_chr5_+_143584814_143584840	0.133547	UCACAGU	ENST00000507359.3|KCTD16|ENSG00000183775.6|potassium channel tetramerization domain containing 16
hg19_v2_chr6_-_42419649_42419789	0.133437	UCACAGU	ENST00000372922.4|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000541110.1|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000372917.4|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1
hg19_v2_chr17_+_45727204_45727220	0.132863	UCACAGU	ENST00000290158.4|KPNB1|ENSG00000108424.5|karyopherin (importin) beta 1
hg19_v2_chr7_+_127881325_127881337	0.13211	UCACAGU	ENST00000308868.4|LEP|ENSG00000174697.4|leptin
hg19_v2_chr2_-_201936302_201936416	0.132086	UCACAGU	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr19_+_17581253_17581352	0.132034	UCACAGU	ENST00000252595.7|SLC27A1|ENSG00000130304.12|solute carrier family 27 (fatty acid transporter), member 1 	ENST00000598424.1|SLC27A1|ENSG00000130304.12|solute carrier family 27 (fatty acid transporter), member 1
hg19_v2_chr1_-_154842741_154842772	0.131703	UCACAGU	ENST00000271915.4|KCNN3|ENSG00000143603.14|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v2_chr6_-_53530474_53530508	0.131492	UCACAGU	ENST00000370905.3|KLHL31|ENSG00000124743.5|kelch-like family member 31
hg19_v2_chr16_+_85646763_85646822	0.131332	UCACAGU	ENST00000411612.1|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein 	ENST00000253458.7|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein
hg19_v2_chr3_+_139654018_139654039	0.131231	UCACAGU	ENST00000458420.3|CLSTN2|ENSG00000158258.11|calsyntenin 2
hg19_v2_chrX_+_102631248_102631335	0.13119	UCACAGU	ENST00000361298.4|NGFRAP1|ENSG00000166681.9|nerve growth factor receptor (TNFRSF16) associated protein 1 	ENST00000372645.3|NGFRAP1|ENSG00000166681.9|nerve growth factor receptor (TNFRSF16) associated protein 1 	ENST00000372635.1|NGFRAP1|ENSG00000166681.9|nerve growth factor receptor (TNFRSF16) associated protein 1
hg19_v2_chr3_-_21792838_21792927	0.130088	UCACAGU	ENST00000281523.2|ZNF385D|ENSG00000151789.5|zinc finger protein 385D
hg19_v2_chr17_+_30264014_30264086	0.129959	UCACAGU	ENST00000322652.5|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit 	ENST00000580398.1|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit
hg19_v2_chr19_+_47104493_47104549	0.128698	UCACAGU	ENST00000291295.9|CALM3|ENSG00000160014.12|calmodulin 3 (phosphorylase kinase, delta) 	ENST00000597743.1|CALM3|ENSG00000160014.12|calmodulin 3 (phosphorylase kinase, delta)
hg19_v2_chr1_+_113161778_113161820	0.128578	UCACAGU	ENST00000263168.3|CAPZA1|ENSG00000116489.8|capping protein (actin filament) muscle Z-line, alpha 1
hg19_v2_chr4_+_81951957_81952119	0.128209	UCACAGU	ENST00000282701.2|BMP3|ENSG00000152785.6|bone morphogenetic protein 3
hg19_v2_chr16_-_70472946_70473024	0.12671	UCACAGU	ENST00000342907.2|ST3GAL2|ENSG00000157350.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 2
hg19_v2_chr9_-_34126730_34126771	0.126688	UCACAGU	ENST00000361264.4|DCAF12|ENSG00000198876.8|DDB1 and CUL4 associated factor 12
hg19_v2_chr12_+_53774423_53774658	0.126644	UCACAGU	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
hg19_v2_chr14_-_59932044_59932114	0.126208	UCACAGU	ENST00000395116.1|GPR135|ENSG00000181619.11|G protein-coupled receptor 135
hg19_v2_chr1_-_85725316_85725367	0.126045	UCACAGU	ENST00000344356.5|C1orf52|ENSG00000162642.9|chromosome 1 open reading frame 52 	ENST00000471115.1|C1orf52|ENSG00000162642.9|chromosome 1 open reading frame 52
hg19_v2_chr11_+_48002076_48002132	0.125692	UCACAGU	ENST00000418331.2|PTPRJ|ENSG00000149177.8|protein tyrosine phosphatase, receptor type, J 	ENST00000440289.2|PTPRJ|ENSG00000149177.8|protein tyrosine phosphatase, receptor type, J
hg19_v2_chr3_+_132136331_132136378	0.123182	UCACAGU	ENST00000260818.6|DNAJC13|ENSG00000138246.11|DnaJ (Hsp40) homolog, subfamily C, member 13
hg19_v2_chr3_+_50649302_50649339	0.122545	UCACAGU	ENST00000446044.1|MAPKAPK3|ENSG00000114738.6|mitogen-activated protein kinase-activated protein kinase 3
hg19_v2_chr19_+_45251804_45251840	0.121693	UCACAGU	ENST00000164227.5|BCL3|ENSG00000069399.8|B-cell CLL/lymphoma 3
hg19_v2_chrX_-_55515635_55515635	0.12154	UCACAGU	ENST00000500968.3|USP51|ENSG00000247746.4|ubiquitin specific peptidase 51
hg19_v2_chr10_-_21786179_21786228	0.12094	UCACAGU	ENST00000377113.5|CASC10|ENSG00000204682.5|cancer susceptibility candidate 10
hg19_v2_chr2_-_71454185_71454242	0.120244	UCACAGU	ENST00000244221.8|PAIP2B|ENSG00000124374.8|poly(A) binding protein interacting protein 2B
hg19_v2_chr10_-_113943447_113943536	0.119576	UCACAGU	ENST00000369425.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000348367.4|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000423155.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial
hg19_v2_chr5_-_142065612_142065638	0.118606	UCACAGU	ENST00000360966.5|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic) 	ENST00000411960.1|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic)
hg19_v2_chr1_-_35395178_35395265	0.118277	UCACAGU	ENST00000373347.1|DLGAP3|ENSG00000116544.7|discs, large (Drosophila) homolog-associated protein 3
hg19_v2_chr21_+_45138941_45139084	0.117659	UCACAGU	ENST00000398081.1|PDXK|ENSG00000160209.14|pyridoxal (pyridoxine, vitamin B6) kinase 	ENST00000468090.1|PDXK|ENSG00000160209.14|pyridoxal (pyridoxine, vitamin B6) kinase 	ENST00000291565.4|PDXK|ENSG00000160209.14|pyridoxal (pyridoxine, vitamin B6) kinase
hg19_v2_chr6_-_30712313_30712332	0.116873	UCACAGU	ENST00000376377.2|IER3|ENSG00000137331.11|immediate early response 3 	ENST00000259874.5|IER3|ENSG00000137331.11|immediate early response 3
hg19_v2_chr9_-_107690420_107690518	0.116311	UCACAGU	ENST00000423487.2|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374733.1|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374736.3|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v2_chr4_+_26862400_26862416	0.114905	UCACAGU	ENST00000467011.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000412829.2|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr11_-_86666427_86666450	0.114375	UCACAGU	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr4_+_55095264_55095390	0.113758	UCACAGU	ENST00000257290.5|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chr16_-_65155833_65155976	0.113662	UCACAGU	ENST00000566827.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000394156.3|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000562998.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast)
hg19_v2_chr20_-_48532019_48532045	0.113646	UCACAGU	ENST00000289431.5|SPATA2|ENSG00000158480.6|spermatogenesis associated 2
hg19_v2_chr15_+_80987617_80987720	0.113402	UCACAGU	ENST00000258884.4|ABHD17C|ENSG00000136379.7|abhydrolase domain containing 17C 	ENST00000558464.1|ABHD17C|ENSG00000136379.7|abhydrolase domain containing 17C
hg19_v2_chr12_+_132195617_132195682	0.113382	UCACAGU	ENST00000261674.4|SFSWAP|ENSG00000061936.5|splicing factor, suppressor of white-apricot homolog (Drosophila) 	ENST00000535236.1|SFSWAP|ENSG00000061936.5|splicing factor, suppressor of white-apricot homolog (Drosophila) 	ENST00000541286.1|SFSWAP|ENSG00000061936.5|splicing factor, suppressor of white-apricot homolog (Drosophila)
hg19_v2_chr2_+_24163281_24163363	0.1127	UCACAGU	ENST00000309033.4|UBXN2A|ENSG00000173960.8|UBX domain protein 2A
hg19_v2_chr19_-_36391434_36391564	0.111886	UCACAGU	ENST00000396901.1|NFKBID|ENSG00000167604.9|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta 	ENST00000585925.1|NFKBID|ENSG00000167604.9|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
hg19_v2_chr6_+_36164487_36164559	0.111496	UCACAGU	ENST00000357641.6|BRPF3|ENSG00000096070.15|bromodomain and PHD finger containing, 3
hg19_v2_chr19_-_11450249_11450350	0.111458	UCACAGU	ENST00000222120.3|RAB3D|ENSG00000105514.3|RAB3D, member RAS oncogene family
hg19_v2_chr14_-_91526922_91527001	0.110504	UCACAGU	ENST00000418736.2|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5 	ENST00000261991.3|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5
hg19_v2_chr3_+_155588300_155588369	0.110135	UCACAGU	ENST00000496455.2|GMPS|ENSG00000163655.11|guanine monphosphate synthase
hg19_v2_chr1_-_41131326_41131400	0.109699	UCACAGU	ENST00000372684.3|RIMS3|ENSG00000117016.5|regulating synaptic membrane exocytosis 3
hg19_v2_chr20_-_43150601_43150751	0.109539	UCACAGU	ENST00000541235.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000255175.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000342374.4|SERINC3|ENSG00000132824.9|serine incorporator 3
hg19_v2_chr13_+_26828275_26828312	0.108754	UCACAGU	ENST00000381527.3|CDK8|ENSG00000132964.7|cyclin-dependent kinase 8
hg19_v2_chrX_-_80065146_80065250	0.1082	UCACAGU	ENST00000373275.4|BRWD3|ENSG00000165288.10|bromodomain and WD repeat domain containing 3
hg19_v2_chr2_+_162272605_162272753	0.10743	UCACAGU	ENST00000389554.3|TBR1|ENSG00000136535.10|T-box, brain, 1
hg19_v2_chr12_-_124457371_124457387	0.107404	UCACAGU	ENST00000238156.3|CCDC92|ENSG00000119242.4|coiled-coil domain containing 92 	ENST00000545037.1|CCDC92|ENSG00000119242.4|coiled-coil domain containing 92
hg19_v2_chr17_-_3461092_3461126	0.104616	UCACAGU	ENST00000301365.4|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3 	ENST00000572519.1|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3
hg19_v2_chr4_-_89744457_89744512	0.104215	UCACAGU	ENST00000395002.2|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr20_+_3776371_3776506	0.103984	UCACAGU	ENST00000245960.5|CDC25B|ENSG00000101224.13|cell division cycle 25B
hg19_v2_chr5_+_14664762_14664868	0.1036	UCACAGU	ENST00000284274.4|FAM105B|ENSG00000154124.4|family with sequence similarity 105, member B
hg19_v2_chr16_+_577697_577856	0.103192	UCACAGU	ENST00000562370.1|CAPN15|ENSG00000103326.6|calpain 15 	ENST00000568988.1|CAPN15|ENSG00000103326.6|calpain 15 	ENST00000219611.2|CAPN15|ENSG00000103326.6|calpain 15
hg19_v2_chr12_+_105501487_105501562	0.101623	UCACAGU	ENST00000332180.5|KIAA1033|ENSG00000136051.9|KIAA1033
hg19_v2_chr5_+_109025067_109025146	0.101419	UCACAGU	ENST00000261483.4|MAN2A1|ENSG00000112893.5|mannosidase, alpha, class 2A, member 1
hg19_v2_chr1_-_78444776_78444800	0.101199	UCACAGU	ENST00000370767.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1 	ENST00000421641.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1
hg19_v2_chr2_-_169104651_169104651	0.100338	UCACAGU	ENST00000355999.4|STK39|ENSG00000198648.6|serine threonine kinase 39
hg19_v2_chr10_+_97803151_97803348	0.100278	UCACAGU	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr9_+_112403088_112403142	0.0989876	UCACAGU	ENST00000448454.2|PALM2|ENSG00000243444.3|paralemmin 2
hg19_v2_chr1_+_204494618_204494676	0.09867	UCACAGU	ENST00000367180.1|MDM4|ENSG00000198625.8|Mdm4 p53 binding protein homolog (mouse) 	ENST00000391947.2|MDM4|ENSG00000198625.8|Mdm4 p53 binding protein homolog (mouse)
hg19_v2_chr18_+_54318616_54318640	0.0981626	UCACAGU	ENST00000254442.3|WDR7|ENSG00000091157.9|WD repeat domain 7
hg19_v2_chr10_-_52383644_52383743	0.0977777	UCACAGU	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr1_-_154531095_154531119	0.0976662	UCACAGU	ENST00000292211.4|UBE2Q1|ENSG00000160714.5|ubiquitin-conjugating enzyme E2Q family member 1
hg19_v2_chr2_+_172778952_172779004	0.0976325	UCACAGU	ENST00000392584.1|HAT1|ENSG00000128708.8|histone acetyltransferase 1 	ENST00000264108.4|HAT1|ENSG00000128708.8|histone acetyltransferase 1
hg19_v2_chr14_+_103243813_103243955	0.0970167	UCACAGU	ENST00000560371.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000347662.4|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000392745.2|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000539721.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000560463.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3
hg19_v2_chr3_-_164913777_164913790	0.0968436	UCACAGU	ENST00000475390.1|SLITRK3|ENSG00000121871.3|SLIT and NTRK-like family, member 3
hg19_v2_chr8_-_8751068_8751158	0.0963313	UCACAGU	ENST00000276282.6|MFHAS1|ENSG00000147324.6|malignant fibrous histiocytoma amplified sequence 1
hg19_v2_chr17_+_38474489_38474548	0.0962259	UCACAGU	ENST00000394089.2|RARA|ENSG00000131759.13|retinoic acid receptor, alpha 	ENST00000425707.3|RARA|ENSG00000131759.13|retinoic acid receptor, alpha
hg19_v2_chrX_+_51486481_51486549	0.0957744	UCACAGU	ENST00000340438.4|GSPT2|ENSG00000189369.7|G1 to S phase transition 2
hg19_v2_chr11_+_73087309_73087452	0.0957554	UCACAGU	ENST00000064780.2|RELT|ENSG00000054967.8|RELT tumor necrosis factor receptor 	ENST00000545687.1|RELT|ENSG00000054967.8|RELT tumor necrosis factor receptor
hg19_v2_chr3_-_52931557_52931623	0.095734	UCACAGU	ENST00000504329.1|TMEM110-MUSTN1|ENSG00000248592.3|TMEM110-MUSTN1 readthrough 	ENST00000355083.5|TMEM110|ENSG00000213533.7|transmembrane protein 110
hg19_v2_chr2_+_228336849_228336904	0.0957264	UCACAGU	ENST00000409979.2|AGFG1|ENSG00000173744.13|ArfGAP with FG repeats 1 	ENST00000310078.8|AGFG1|ENSG00000173744.13|ArfGAP with FG repeats 1
hg19_v2_chr1_+_6266228_6266239	0.0955353	UCACAGU	ENST00000377939.4|RNF207|ENSG00000158286.8|ring finger protein 207
hg19_v2_chr17_-_42143963_42144103	0.0948106	UCACAGU	ENST00000585388.1|LSM12|ENSG00000161654.5|LSM12 homolog (S. cerevisiae) 	ENST00000293406.3|LSM12|ENSG00000161654.5|LSM12 homolog (S. cerevisiae)
hg19_v2_chr1_-_206945830_206945845	0.0941174	UCACAGU	ENST00000423557.1|IL10|ENSG00000136634.5|interleukin 10
hg19_v2_chr12_-_31945172_31945178	0.0940728	UCACAGU	ENST00000340398.3|H3F3C|ENSG00000188375.3|H3 histone, family 3C
hg19_v2_chr7_-_27213893_27213954	0.0932396	UCACAGU	ENST00000283921.4|HOXA10|ENSG00000253293.3|homeobox A10
hg19_v2_chr14_-_81687197_81687280	0.0929322	UCACAGU	ENST00000553612.1|GTF2A1|ENSG00000165417.7|general transcription factor IIA, 1, 19/37kDa
hg19_v2_chr2_+_148778570_148778589	0.092028	UCACAGU	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr2_-_208030647_208030689	0.0907997	UCACAGU	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr17_+_30813576_30813637	0.0905961	UCACAGU	ENST00000313401.3|CDK5R1|ENSG00000176749.4|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg19_v2_chr5_+_112043186_112043225	0.0905893	UCACAGU	ENST00000509732.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000457016.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000507379.1|APC|ENSG00000134982.12|adenomatous polyposis coli
hg19_v2_chr16_-_58663720_58663790	0.0902014	UCACAGU	ENST00000564557.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569240.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000441024.2|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569020.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000317147.5|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1
hg19_v2_chr4_+_20255123_20255213	0.0899155	UCACAGU	ENST00000504154.1|SLIT2|ENSG00000145147.15|slit homolog 2 (Drosophila) 	ENST00000273739.5|SLIT2|ENSG00000145147.15|slit homolog 2 (Drosophila)
hg19_v2_chr16_-_23160591_23160787	0.0893866	UCACAGU	ENST00000219689.7|USP31|ENSG00000103404.10|ubiquitin specific peptidase 31
hg19_v2_chr5_+_76326187_76326300	0.088888	UCACAGU	ENST00000312916.7|AGGF1|ENSG00000164252.8|angiogenic factor with G patch and FHA domains 1 	ENST00000506806.1|AGGF1|ENSG00000164252.8|angiogenic factor with G patch and FHA domains 1
hg19_v2_chr9_-_130533615_130533717	0.0879428	UCACAGU	ENST00000373277.4|SH2D3C|ENSG00000095370.15|SH2 domain containing 3C
hg19_v2_chr12_-_57400227_57400245	0.0876057	UCACAGU	ENST00000300101.2|ZBTB39|ENSG00000166860.2|zinc finger and BTB domain containing 39
hg19_v2_chr3_+_122513642_122513664	0.0874904	UCACAGU	ENST00000261038.5|DIRC2|ENSG00000138463.8|disrupted in renal carcinoma 2
hg19_v2_chr1_+_113010056_113010056	0.0873813	UCACAGU	ENST00000369686.5|WNT2B|ENSG00000134245.13|wingless-type MMTV integration site family, member 2B
hg19_v2_chr2_-_68479614_68479685	0.0872679	UCACAGU	ENST00000234310.3|PPP3R1|ENSG00000221823.6|protein phosphatase 3, regulatory subunit B, alpha
hg19_v2_chr7_-_150780609_150780633	0.0863778	UCACAGU	ENST00000297533.4|TMUB1|ENSG00000164897.8|transmembrane and ubiquitin-like domain containing 1
hg19_v2_chr17_+_6939362_6939410	0.0860488	UCACAGU	ENST00000308027.6|SLC16A13|ENSG00000174327.6|solute carrier family 16, member 13
hg19_v2_chr12_-_102874416_102874425	0.0859358	UCACAGU	ENST00000392904.1|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C) 	ENST00000337514.6|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C)
hg19_v2_chr15_-_73661605_73661605	0.085351	UCACAGU	ENST00000261917.3|HCN4|ENSG00000138622.3|hyperpolarization activated cyclic nucleotide-gated potassium channel 4
hg19_v2_chr3_+_67048721_67048760	0.0852751	UCACAGU	ENST00000295568.4|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000484414.1|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000460576.1|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000417314.2|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8
hg19_v2_chr8_+_61591337_61591393	0.0852746	UCACAGU	ENST00000423902.2|CHD7|ENSG00000171316.7|chromodomain helicase DNA binding protein 7
hg19_v2_chr17_-_62658186_62658231	0.0847823	UCACAGU	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr17_+_12569306_12569344	0.0846724	UCACAGU	ENST00000425538.1|MYOCD|ENSG00000141052.13|myocardin
hg19_v2_chr2_+_173420697_173420873	0.0836981	UCACAGU	ENST00000282077.3|PDK1|ENSG00000152256.9|pyruvate dehydrogenase kinase, isozyme 1 	ENST00000392571.2|PDK1|ENSG00000152256.9|pyruvate dehydrogenase kinase, isozyme 1 	ENST00000410055.1|PDK1|ENSG00000152256.9|pyruvate dehydrogenase kinase, isozyme 1
hg19_v2_chr12_-_106641728_106641805	0.0832564	UCACAGU	ENST00000378026.4|CKAP4|ENSG00000136026.9|cytoskeleton-associated protein 4
hg19_v2_chr17_+_25621102_25621157	0.0828133	UCACAGU	ENST00000581440.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000262394.2|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000583742.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000579733.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000583193.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000581185.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000427287.2|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000348811.2|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1
hg19_v2_chr20_-_60982330_60982375	0.0826761	UCACAGU	ENST00000279101.5|CABLES2|ENSG00000149679.7|Cdk5 and Abl enzyme substrate 2
hg19_v2_chr9_-_23821273_23821313	0.0826022	UCACAGU	ENST00000380110.4|ELAVL2|ENSG00000107105.10|ELAV like neuron-specific RNA binding protein 2
hg19_v2_chr12_-_58240470_58240522	0.0822527	UCACAGU	ENST00000548823.1|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 	ENST00000398073.2|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
hg19_v2_chr10_+_104678032_104678094	0.0810432	UCACAGU	ENST00000369878.4|CNNM2|ENSG00000148842.13|cyclin M2 	ENST00000369875.3|CNNM2|ENSG00000148842.13|cyclin M2
hg19_v2_chr7_-_27239703_27239725	0.0794153	UCACAGU	ENST00000222753.4|HOXA13|ENSG00000106031.6|homeobox A13
hg19_v2_chr21_+_35445827_35445886	0.0793584	UCACAGU	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chr3_-_113465065_113465147	0.0791327	UCACAGU	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr16_+_77822427_77822469	0.0788449	UCACAGU	ENST00000302536.2|VAT1L|ENSG00000171724.2|vesicle amine transport 1-like
hg19_v2_chr2_+_210636697_210636763	0.078573	UCACAGU	ENST00000439458.1|UNC80|ENSG00000144406.14|unc-80 homolog (C. elegans) 	ENST00000272845.6|UNC80|ENSG00000144406.14|unc-80 homolog (C. elegans)
hg19_v2_chr1_+_180199393_180199426	0.0784334	UCACAGU	ENST00000263726.2|LHX4|ENSG00000121454.4|LIM homeobox 4
hg19_v2_chr2_-_178128528_178128574	0.0777469	UCACAGU	ENST00000397063.4|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2 	ENST00000421929.1|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2
hg19_v2_chr3_+_119187785_119187863	0.0771439	UCACAGU	ENST00000295588.4|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1 	ENST00000476573.1|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1
hg19_v2_chr9_-_135819987_135820020	0.0771412	UCACAGU	ENST00000298552.3|TSC1|ENSG00000165699.9|tuberous sclerosis 1 	ENST00000403810.1|TSC1|ENSG00000165699.9|tuberous sclerosis 1
hg19_v2_chr3_+_11034403_11034492	0.0761912	UCACAGU	ENST00000287766.4|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1 	ENST00000425938.1|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1
hg19_v2_chr1_+_32930647_32930684	0.0761087	UCACAGU	ENST00000609129.1|ZBTB8B|ENSG00000273274.1|zinc finger and BTB domain containing 8B
hg19_v2_chr1_-_155881156_155881210	0.0758981	UCACAGU	ENST00000539040.1|RIT1|ENSG00000143622.6|Ras-like without CAAX 1 	ENST00000368323.3|RIT1|ENSG00000143622.6|Ras-like without CAAX 1
hg19_v2_chr22_+_41956767_41956852	0.0756006	UCACAGU	ENST00000306149.7|CSDC2|ENSG00000172346.10|cold shock domain containing C2, RNA binding
hg19_v2_chr8_+_1922024_1922069	0.0755898	UCACAGU	ENST00000320248.3|KBTBD11|ENSG00000176595.3|kelch repeat and BTB (POZ) domain containing 11
hg19_v2_chr3_-_135914615_135914701	0.0754671	UCACAGU	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr12_+_83080659_83080693	0.0749788	UCACAGU	ENST00000321196.3|TMTC2|ENSG00000179104.4|transmembrane and tetratricopeptide repeat containing 2
hg19_v2_chr8_-_75233563_75233681	0.0746801	UCACAGU	ENST00000342232.4|JPH1|ENSG00000104369.4|junctophilin 1
hg19_v2_chr16_-_3493528_3493542	0.074481	UCACAGU	ENST00000301744.4|ZNF597|ENSG00000167981.4|zinc finger protein 597
hg19_v2_chr18_-_31803435_31803515	0.07429	UCACAGU	ENST00000589544.1|NOL4|ENSG00000101746.11|nucleolar protein 4 	ENST00000269185.4|NOL4|ENSG00000101746.11|nucleolar protein 4 	ENST00000261592.5|NOL4|ENSG00000101746.11|nucleolar protein 4
hg19_v2_chr7_+_6144514_6144614	0.0733516	UCACAGU	ENST00000306177.5|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42 	ENST00000465073.2|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42
hg19_v2_chr1_-_174992544_174992576	0.0732628	UCACAGU	ENST00000476371.1|MRPS14|ENSG00000120333.4|mitochondrial ribosomal protein S14
hg19_v2_chr1_+_6673745_6673830	0.0728758	UCACAGU	ENST00000377648.4|PHF13|ENSG00000116273.5|PHD finger protein 13
hg19_v2_chr12_-_53730147_53730177	0.0724295	UCACAGU	ENST00000536324.2|SP7|ENSG00000170374.4|Sp7 transcription factor
hg19_v2_chr6_+_13925098_13925163	0.0719633	UCACAGU	ENST00000488300.1|RNF182|ENSG00000180537.8|ring finger protein 182 	ENST00000544682.1|RNF182|ENSG00000180537.8|ring finger protein 182 	ENST00000420478.2|RNF182|ENSG00000180537.8|ring finger protein 182
hg19_v2_chr6_-_119399895_119399915	0.0715862	UCACAGU	ENST00000338891.7|FAM184A|ENSG00000111879.14|family with sequence similarity 184, member A
hg19_v2_chr20_+_48599506_48599536	0.0714248	UCACAGU	ENST00000244050.2|SNAI1|ENSG00000124216.3|snail family zinc finger 1
hg19_v2_chr12_-_48119340_48119350	0.0709121	UCACAGU	ENST00000229003.3|ENDOU|ENSG00000111405.4|endonuclease, polyU-specific
hg19_v2_chr11_-_30038490_30038590	0.0701027	UCACAGU	ENST00000328224.6|KCNA4|ENSG00000182255.6|potassium voltage-gated channel, shaker-related subfamily, member 4
hg19_v2_chr12_+_3600356_3600406	0.0695146	UCACAGU	ENST00000382622.3|PRMT8|ENSG00000111218.7|protein arginine methyltransferase 8
hg19_v2_chr12_-_82153087_82153138	0.0692661	UCACAGU	ENST00000547623.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000549396.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr13_-_77900814_77900935	0.0683212	UCACAGU	ENST00000544440.2|MYCBP2|ENSG00000005810.13|MYC binding protein 2, E3 ubiquitin protein ligase
hg19_v2_chr16_+_30087288_30087360	0.0679824	UCACAGU	ENST00000279387.7|PPP4C|ENSG00000149923.9|protein phosphatase 4, catalytic subunit 	ENST00000562664.1|PPP4C|ENSG00000149923.9|protein phosphatase 4, catalytic subunit 	ENST00000562222.1|PPP4C|ENSG00000149923.9|protein phosphatase 4, catalytic subunit
hg19_v2_chr15_+_72766651_72766680	0.0678755	UCACAGU	ENST00000379887.4|ARIH1|ENSG00000166233.8|ariadne RBR E3 ubiquitin protein ligase 1
hg19_v2_chrX_-_30885319_30885319	0.066792	UCACAGU	ENST00000378933.1|TAB3|ENSG00000157625.11|TGF-beta activated kinase 1/MAP3K7 binding protein 3
hg19_v2_chr13_-_49018789_49018840	0.0667801	UCACAGU	ENST00000378434.4|LPAR6|ENSG00000139679.11|lysophosphatidic acid receptor 6
hg19_v2_chr4_+_56815102_56815147	0.0664538	UCACAGU	ENST00000257287.4|CEP135|ENSG00000174799.6|centrosomal protein 135kDa
hg19_v2_chr7_-_103629963_103630056	0.0657957	UCACAGU	ENST00000428762.1|RELN|ENSG00000189056.9|reelin 	ENST00000343529.5|RELN|ENSG00000189056.9|reelin 	ENST00000424685.2|RELN|ENSG00000189056.9|reelin
hg19_v2_chr17_-_58603568_58603610	0.0657869	UCACAGU	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr10_+_18549645_18549698	0.0650175	UCACAGU	ENST00000396576.2|CACNB2|ENSG00000165995.14|calcium channel, voltage-dependent, beta 2 subunit
hg19_v2_chrX_+_64887512_64887537	0.0650109	UCACAGU	ENST00000360270.5|MSN|ENSG00000147065.12|moesin
hg19_v2_chr17_+_11144580_11144740	0.0648609	UCACAGU	ENST00000441885.3|SHISA6|ENSG00000188803.10|shisa family member 6 	ENST00000432116.3|SHISA6|ENSG00000188803.10|shisa family member 6 	ENST00000409168.3|SHISA6|ENSG00000188803.10|shisa family member 6
hg19_v2_chr2_+_148602058_148602185	0.0641921	UCACAGU	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr2_-_158485387_158485517	0.0640718	UCACAGU	ENST00000243349.8|ACVR1C|ENSG00000123612.11|activin A receptor, type IC
hg19_v2_chr15_-_63674218_63674360	0.0639823	UCACAGU	ENST00000178638.3|CA12|ENSG00000074410.9|carbonic anhydrase XII
hg19_v2_chrX_+_16964794_16964861	0.06317	UCACAGU	ENST00000357277.3|REPS2|ENSG00000169891.13|RALBP1 associated Eps domain containing 2
hg19_v2_chr4_-_74124502_74124523	0.0629821	UCACAGU	ENST00000358602.4|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000330838.6|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000561029.1|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17
hg19_v2_chrX_-_40594755_40594809	0.0627738	UCACAGU	ENST00000324817.1|MED14|ENSG00000180182.6|mediator complex subunit 14
hg19_v2_chr2_-_206950781_206950947	0.0626798	UCACAGU	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr3_-_56502375_56502428	0.0625173	UCACAGU	ENST00000288221.6|ERC2|ENSG00000187672.8|ELKS/RAB6-interacting/CAST family member 2
hg19_v2_chr4_-_153457197_153457268	0.0621431	UCACAGU	ENST00000281708.4|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chr17_-_56084578_56084707	0.061137	UCACAGU	ENST00000582730.2|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000584773.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000585096.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000258962.4|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1
hg19_v2_chr6_+_99282570_99282591	0.0603614	UCACAGU	ENST00000328345.5|POU3F2|ENSG00000184486.7|POU class 3 homeobox 2
hg19_v2_chr16_-_71758602_71758604	0.0582131	UCACAGU	ENST00000568954.1|PHLPP2|ENSG00000040199.14|PH domain and leucine rich repeat protein phosphatase 2
hg19_v2_chr2_-_113191096_113191222	0.0572799	UCACAGU	ENST00000496537.1|RGPD8|ENSG00000169629.7|RANBP2-like and GRIP domain containing 8 	ENST00000330575.5|RGPD8|ENSG00000169629.7|RANBP2-like and GRIP domain containing 8 	ENST00000302558.3|RGPD8|ENSG00000169629.7|RANBP2-like and GRIP domain containing 8
hg19_v2_chr20_+_57226284_57226345	0.0568883	UCACAGU	ENST00000458280.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000355957.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000361770.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000312283.8|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000412911.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000359617.4|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000371141.4|STX16|ENSG00000124222.17|syntaxin 16
hg19_v2_chr4_-_151936865_151936891	0.0564714	UCACAGU	ENST00000535741.1|LRBA|ENSG00000198589.6|LPS-responsive vesicle trafficking, beach and anchor containing
hg19_v2_chr4_+_113970772_113970885	0.0563851	UCACAGU	ENST00000504454.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000394537.3|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000357077.4|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000264366.6|ANK2|ENSG00000145362.12|ankyrin 2, neuronal
hg19_v2_chr5_+_173315283_173315335	0.0558458	UCACAGU	ENST00000265085.5|CPEB4|ENSG00000113742.8|cytoplasmic polyadenylation element binding protein 4
hg19_v2_chr12_-_48499591_48499663	0.0558263	UCACAGU	ENST00000551330.1|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000004980.5|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000339976.6|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000448372.1|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1
hg19_v2_chr16_-_89007491_89007608	0.0555329	UCACAGU	ENST00000327483.5|CBFA2T3|ENSG00000129993.10|core-binding factor, runt domain, alpha subunit 2; translocated to, 3 	ENST00000564416.1|CBFA2T3|ENSG00000129993.10|core-binding factor, runt domain, alpha subunit 2; translocated to, 3
hg19_v2_chr21_+_45285050_45285069	0.055255	UCACAGU	ENST00000291572.8|AGPAT3|ENSG00000160216.14|1-acylglycerol-3-phosphate O-acyltransferase 3
hg19_v2_chr15_-_79383102_79383127	0.05523	UCACAGU	ENST00000558480.2|RASGRF1|ENSG00000058335.11|Ras protein-specific guanine nucleotide-releasing factor 1 	ENST00000419573.3|RASGRF1|ENSG00000058335.11|Ras protein-specific guanine nucleotide-releasing factor 1
hg19_v2_chr2_-_50574856_50574892	0.0551894	UCACAGU	ENST00000342183.5|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chr3_-_142682178_142682178	0.0551438	UCACAGU	ENST00000340634.3|PAQR9|ENSG00000188582.4|progestin and adipoQ receptor family member IX
hg19_v2_chr20_-_50419055_50419066	0.0548018	UCACAGU	ENST00000217086.4|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr16_+_86612112_86612123	0.054609	UCACAGU	ENST00000320241.3|FOXL1|ENSG00000176678.4|forkhead box L1
hg19_v2_chr20_-_30795511_30795594	0.0539274	UCACAGU	ENST00000246229.4|PLAGL2|ENSG00000126003.6|pleiomorphic adenoma gene-like 2
hg19_v2_chr16_-_57219966_57220028	0.0537175	UCACAGU	ENST00000565760.1|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A 	ENST00000309137.8|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A 	ENST00000570184.1|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A 	ENST00000562324.1|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A
hg19_v2_chr10_+_126630692_126630692	0.0531979	UCACAGU	ENST00000359653.4|ZRANB1|ENSG00000019995.6|zinc finger, RAN-binding domain containing 1
hg19_v2_chr1_-_154474589_154474589	0.053034	UCACAGU	ENST00000304760.2|SHE|ENSG00000169291.5|Src homology 2 domain containing E
hg19_v2_chr8_+_28747884_28747938	0.0524493	UCACAGU	ENST00000287701.10|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000444075.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000403668.2|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000519662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000558662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000523613.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000560599.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000397358.3|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr14_+_55493920_55494013	0.0524026	UCACAGU	ENST00000395472.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4 	ENST00000555846.1|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr12_-_47219733_47219785	0.0518359	UCACAGU	ENST00000547477.1|SLC38A4|ENSG00000139209.11|solute carrier family 38, member 4 	ENST00000447411.1|SLC38A4|ENSG00000139209.11|solute carrier family 38, member 4 	ENST00000266579.4|SLC38A4|ENSG00000139209.11|solute carrier family 38, member 4
hg19_v2_chr1_-_35658736_35658754	0.0515386	UCACAGU	ENST00000357214.5|SFPQ|ENSG00000116560.6|splicing factor proline/glutamine-rich
hg19_v2_chr3_+_54156664_54156694	0.0515072	UCACAGU	ENST00000474759.1|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3 	ENST00000288197.5|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3
hg19_v2_chr16_-_75498553_75498635	0.0513319	UCACAGU	ENST00000569276.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000357613.4|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000561878.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000567194.1|RP11-77K12.1|ENSG00000261717.1|Uncharacterized protein  	ENST00000566980.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A
hg19_v2_chr11_-_123525289_123525341	0.0510149	UCACAGU	ENST00000392770.2|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit 	ENST00000299333.3|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit 	ENST00000530277.1|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit
hg19_v2_chr17_+_29421900_29421951	0.0502959	UCACAGU	ENST00000358273.4|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000356175.3|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr2_-_151344172_151344243	0.0495996	UCACAGU	ENST00000375734.2|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000263895.4|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000454202.1|RND3|ENSG00000115963.9|Rho family GTPase 3
hg19_v2_chr2_-_111334678_111334762	0.0490199	UCACAGU	ENST00000329516.3|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000330331.5|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000446930.1|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6
hg19_v2_chr20_+_60718785_60718853	0.048686	UCACAGU	ENST00000421564.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000450482.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000331758.3|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1
hg19_v2_chr14_+_36003248_36003378	0.0483127	UCACAGU	ENST00000307169.3|INSM2|ENSG00000168348.3|insulinoma-associated 2
hg19_v2_chr3_+_9439400_9439414	0.0477305	UCACAGU	ENST00000450326.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402198.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402466.1|SETD5|ENSG00000168137.11|SET domain containing 5
hg19_v2_chr13_+_42622781_42622889	0.0474133	UCACAGU	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr11_+_125034586_125034604	0.0471808	UCACAGU	ENST00000298282.9|PKNOX2|ENSG00000165495.11|PBX/knotted 1 homeobox 2
hg19_v2_chr2_-_54087066_54087297	0.0471224	UCACAGU	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr14_+_73603126_73603255	0.0470724	UCACAGU	ENST00000557356.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556864.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556533.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556951.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000557293.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000553719.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000553599.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556011.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000394157.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000357710.4|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000324501.5|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000560005.2|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000555254.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000261970.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000344094.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000554131.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000557037.1|PSEN1|ENSG00000080815.14|presenilin 1
hg19_v2_chr11_+_73882144_73882276	0.0470685	UCACAGU	ENST00000328257.8|PPME1|ENSG00000214517.4|protein phosphatase methylesterase 1
hg19_v2_chr1_+_32666188_32666274	0.0468586	UCACAGU	ENST00000421922.2|CCDC28B|ENSG00000160050.10|coiled-coil domain containing 28B
hg19_v2_chr16_+_22019404_22019604	0.0466922	UCACAGU	ENST00000542527.2|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000569656.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000562695.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52
hg19_v2_chr3_+_32859510_32859546	0.0466344	UCACAGU	ENST00000383763.5|TRIM71|ENSG00000206557.5|tripartite motif containing 71, E3 ubiquitin protein ligase
hg19_v2_chr17_-_73775839_73775868	0.0461283	UCACAGU	ENST00000592643.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000591890.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000587171.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000254810.4|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000589599.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B)
hg19_v2_chr4_+_115519577_115519631	0.0461054	UCACAGU	ENST00000310836.6|UGT8|ENSG00000174607.6|UDP glycosyltransferase 8
hg19_v2_chr1_-_31712401_31712401	0.0455167	UCACAGU	ENST00000373736.2|NKAIN1|ENSG00000084628.5|Na+/K+ transporting ATPase interacting 1
hg19_v2_chr5_+_53813536_53813613	0.0454421	UCACAGU	ENST00000343017.6|SNX18|ENSG00000178996.8|sorting nexin 18 	ENST00000381410.4|SNX18|ENSG00000178996.8|sorting nexin 18 	ENST00000326277.3|SNX18|ENSG00000178996.8|sorting nexin 18
hg19_v2_chr12_+_60083118_60083157	0.045431	UCACAGU	ENST00000261187.4|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000543448.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chrX_+_142967173_142967173	0.0437463	UCACAGU	ENST00000370494.1|UBE2NL|ENSG00000102069.3|ubiquitin-conjugating enzyme E2N-like
hg19_v2_chr1_-_33502441_33502500	0.0436528	UCACAGU	ENST00000548033.1|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000487289.1|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000373449.2|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000480134.1|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000467905.1|AK2|ENSG00000004455.12|adenylate kinase 2
hg19_v2_chr1_-_85156216_85156240	0.0435273	UCACAGU	ENST00000342203.3|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein 	ENST00000370612.4|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein
hg19_v2_chr6_-_46293378_46293415	0.0433288	UCACAGU	ENST00000330430.6|RCAN2|ENSG00000172348.10|regulator of calcineurin 2
hg19_v2_chr4_+_71587669_71587752	0.0429473	UCACAGU	ENST00000381006.3|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3 	ENST00000226328.4|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr16_+_66878814_66878843	0.0418325	UCACAGU	ENST00000394069.3|CA7|ENSG00000168748.9|carbonic anhydrase VII
hg19_v2_chr6_-_71666732_71666769	0.0414461	UCACAGU	ENST00000230053.6|B3GAT2|ENSG00000112309.6|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
hg19_v2_chr13_-_20357057_20357105	0.0414223	UCACAGU	ENST00000338910.4|PSPC1|ENSG00000121390.13|paraspeckle component 1
hg19_v2_chr16_-_25269134_25269252	0.0413947	UCACAGU	ENST00000328086.7|ZKSCAN2|ENSG00000155592.11|zinc finger with KRAB and SCAN domains 2
hg19_v2_chr9_-_140196703_140196744	0.0405229	UCACAGU	ENST00000356628.2|NRARP|ENSG00000198435.2|NOTCH-regulated ankyrin repeat protein
hg19_v2_chr15_+_81293254_81293304	0.0403303	UCACAGU	ENST00000267984.2|MESDC1|ENSG00000140406.2|mesoderm development candidate 1
hg19_v2_chr18_+_13218769_13218792	0.0402216	UCACAGU	ENST00000399848.3|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4 	ENST00000361205.4|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr12_+_120875910_120876001	0.0398619	UCACAGU	ENST00000551806.1|AL021546.6|ENSG00000111780.8|Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial
hg19_v2_chr12_-_120806960_120806985	0.039625	UCACAGU	ENST00000257552.2|MSI1|ENSG00000135097.2|musashi RNA-binding protein 1
hg19_v2_chr21_+_22370608_22370638	0.0394278	UCACAGU	ENST00000400546.1|NCAM2|ENSG00000154654.10|neural cell adhesion molecule 2
hg19_v2_chr3_+_36421826_36421844	0.0392405	UCACAGU	ENST00000273183.3|STAC|ENSG00000144681.6|SH3 and cysteine rich domain
hg19_v2_chr15_+_101142722_101142816	0.0386139	UCACAGU	ENST00000332783.7|ASB7|ENSG00000183475.8|ankyrin repeat and SOCS box containing 7 	ENST00000558747.1|ASB7|ENSG00000183475.8|ankyrin repeat and SOCS box containing 7 	ENST00000343276.4|ASB7|ENSG00000183475.8|ankyrin repeat and SOCS box containing 7
hg19_v2_chr14_+_100259666_100259685	0.038592	UCACAGU	ENST00000262233.6|EML1|ENSG00000066629.12|echinoderm microtubule associated protein like 1 	ENST00000334192.4|EML1|ENSG00000066629.12|echinoderm microtubule associated protein like 1
hg19_v2_chr12_-_104350898_104351051	0.0382035	UCACAGU	ENST00000552940.1|C12orf73|ENSG00000204954.5|chromosome 12 open reading frame 73 	ENST00000547975.1|C12orf73|ENSG00000204954.5|chromosome 12 open reading frame 73 	ENST00000549478.1|C12orf73|ENSG00000204954.5|chromosome 12 open reading frame 73 	ENST00000546540.1|C12orf73|ENSG00000204954.5|chromosome 12 open reading frame 73 	ENST00000546819.1|C12orf73|ENSG00000204954.5|chromosome 12 open reading frame 73 	ENST00000378090.4|C12orf73|ENSG00000204954.5|chromosome 12 open reading frame 73 	ENST00000547945.1|C12orf73|ENSG00000204954.5|chromosome 12 open reading frame 73
hg19_v2_chr17_+_1958388_1958404	0.0371843	UCACAGU	ENST00000399849.3|HIC1|ENSG00000177374.8|hypermethylated in cancer 1
hg19_v2_chr2_-_160472952_160473080	0.0361097	UCACAGU	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr19_+_18794470_18794512	0.0356539	UCACAGU	ENST00000321949.8|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1 	ENST00000338797.6|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1
hg19_v2_chr2_+_110551851_110551977	0.0356208	UCACAGU	ENST00000272454.6|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5 	ENST00000430736.1|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5 	ENST00000016946.3|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5 	ENST00000441344.1|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5
hg19_v2_chr18_+_49866496_49866548	0.0355875	UCACAGU	ENST00000442544.2|DCC|ENSG00000187323.7|deleted in colorectal carcinoma
hg19_v2_chr2_+_24714729_24714927	0.0352442	UCACAGU	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr11_+_120107344_120107351	0.035199	UCACAGU	ENST00000260264.4|POU2F3|ENSG00000137709.5|POU class 2 homeobox 3
hg19_v2_chr1_-_36022979_36023014	0.0350659	UCACAGU	ENST00000469892.1|KIAA0319L|ENSG00000142687.13|KIAA0319-like 	ENST00000325722.3|KIAA0319L|ENSG00000142687.13|KIAA0319-like
hg19_v2_chr12_-_120907459_120907596	0.0346185	UCACAGU	ENST00000229390.3|SRSF9|ENSG00000111786.4|serine/arginine-rich splicing factor 9
hg19_v2_chr19_+_57154508_57154517	0.0346148	UCACAGU	ENST00000598409.1|SMIM17|ENSG00000268182.1|small integral membrane protein 17
hg19_v2_chrX_+_48916497_48916557	0.0345101	UCACAGU	ENST00000496529.2|CCDC120|ENSG00000147144.8|coiled-coil domain containing 120 	ENST00000376396.3|CCDC120|ENSG00000147144.8|coiled-coil domain containing 120 	ENST00000422185.2|CCDC120|ENSG00000147144.8|coiled-coil domain containing 120 	ENST00000603986.1|CCDC120|ENSG00000147144.8|coiled-coil domain containing 120 	ENST00000536628.2|CCDC120|ENSG00000147144.8|coiled-coil domain containing 120
hg19_v2_chr22_+_51112800_51112852	0.0334411	UCACAGU	ENST00000414786.2|SHANK3|ENSG00000251322.3|SH3 and multiple ankyrin repeat domains 3
hg19_v2_chr1_+_220701456_220701574	0.0330669	UCACAGU	ENST00000366918.4|MARK1|ENSG00000116141.11|MAP/microtubule affinity-regulating kinase 1 	ENST00000402574.1|MARK1|ENSG00000116141.11|MAP/microtubule affinity-regulating kinase 1
hg19_v2_chr16_+_28303804_28303864	0.0328848	UCACAGU	ENST00000341901.4|SBK1|ENSG00000188322.4|SH3 domain binding kinase 1
hg19_v2_chr8_-_89339705_89339721	0.0323897	UCACAGU	ENST00000286614.6|MMP16|ENSG00000156103.11|matrix metallopeptidase 16 (membrane-inserted)
hg19_v2_chr8_+_16884740_16884804	0.0316194	UCACAGU	ENST00000318063.5|MICU3|ENSG00000155970.7|mitochondrial calcium uptake family, member 3
hg19_v2_chr5_-_56247935_56247959	0.0313615	UCACAGU	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr15_-_73925651_73925773	0.0313238	UCACAGU	ENST00000545878.1|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000287226.8|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000345330.4|NPTN|ENSG00000156642.12|neuroplastin
hg19_v2_chr2_+_85198216_85198305	0.0312056	UCACAGU	ENST00000456682.1|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1 	ENST00000409785.4|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1
hg19_v2_chr11_+_13299186_13299432	0.0300385	UCACAGU	ENST00000527998.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000396441.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000533520.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529825.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389707.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000401424.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529388.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000530357.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403290.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000361003.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389708.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403510.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000482049.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like
hg19_v2_chr5_+_50678921_50678921	0.0300272	UCACAGU	ENST00000230658.7|ISL1|ENSG00000016082.10|ISL LIM homeobox 1
hg19_v2_chrX_+_56259316_56259480	0.0298385	UCACAGU	ENST00000468660.1|KLF8|ENSG00000102349.10|Kruppel-like factor 8
hg19_v2_chr9_-_127533519_127533576	0.0294968	UCACAGU	ENST00000487099.2|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000344523.4|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000373584.3|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1
hg19_v2_chr1_-_149889382_149889434	0.0294219	UCACAGU	ENST00000369145.1|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A 	ENST00000369146.3|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A
hg19_v2_chr15_+_84904525_84904525	0.0293047	UCACAGU	ENST00000510439.2|GOLGA6L4|ENSG00000184206.7|golgin A6 family-like 4
hg19_v2_chr3_+_142838091_142838173	0.0291349	UCACAGU	ENST00000309575.3|CHST2|ENSG00000175040.4|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2
hg19_v2_chr19_+_4969116_4969143	0.0290519	UCACAGU	ENST00000588337.1|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000159111.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000381759.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B
hg19_v2_chr9_-_19786926_19786926	0.0288576	UCACAGU	ENST00000341998.2|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 	ENST00000286344.3|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg19_v2_chr5_+_132149017_132149073	0.0288064	UCACAGU	ENST00000378693.2|SOWAHA|ENSG00000198944.4|sosondowah ankyrin repeat domain family member A
hg19_v2_chr10_+_43572475_43572527	0.0285146	UCACAGU	ENST00000355710.3|RET|ENSG00000165731.13|ret proto-oncogene 	ENST00000498820.1|RET|ENSG00000165731.13|ret proto-oncogene 	ENST00000340058.5|RET|ENSG00000165731.13|ret proto-oncogene
hg19_v2_chr12_-_110318263_110318320	0.0284841	UCACAGU	ENST00000318348.4|GLTP|ENSG00000139433.5|glycolipid transfer protein
hg19_v2_chr15_-_49255632_49255650	0.0279606	UCACAGU	ENST00000332408.4|SHC4|ENSG00000185634.7|SHC (Src homology 2 domain containing) family, member 4
hg19_v2_chr16_-_30107491_30107569	0.0279107	UCACAGU	ENST00000566134.1|YPEL3|ENSG00000090238.7|yippee-like 3 (Drosophila) 	ENST00000565110.1|YPEL3|ENSG00000090238.7|yippee-like 3 (Drosophila) 	ENST00000398841.1|YPEL3|ENSG00000090238.7|yippee-like 3 (Drosophila) 	ENST00000398838.4|YPEL3|ENSG00000090238.7|yippee-like 3 (Drosophila)
hg19_v2_chr15_+_72947079_72947079	0.027908	UCACAGU	ENST00000421285.3|GOLGA6B|ENSG00000215186.6|golgin A6 family, member B
hg19_v2_chr2_-_128643496_128643496	0.0273141	UCACAGU	ENST00000272647.5|AMMECR1L|ENSG00000144233.5|AMMECR1-like
hg19_v2_chrX_-_74145273_74145319	0.0272726	UCACAGU	ENST00000055682.6|KIAA2022|ENSG00000050030.9|KIAA2022
hg19_v2_chr6_-_8064567_8064652	0.0269043	UCACAGU	ENST00000543936.1|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted 	ENST00000397457.2|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted
hg19_v2_chr22_-_44708731_44708746	0.0262193	UCACAGU	ENST00000381176.4|KIAA1644|ENSG00000138944.7|KIAA1644
hg19_v2_chr5_+_10353780_10353890	0.0262097	UCACAGU	ENST00000449913.2|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000503788.1|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000274140.5|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
hg19_v2_chr2_+_163200598_163200667	0.0257388	UCACAGU	ENST00000437150.2|GCA|ENSG00000115271.6|grancalcin, EF-hand calcium binding protein 	ENST00000453113.2|GCA|ENSG00000115271.6|grancalcin, EF-hand calcium binding protein
hg19_v2_chr19_-_56092187_56092248	0.0252263	UCACAGU	ENST00000325421.4|ZNF579|ENSG00000218891.2|zinc finger protein 579 	ENST00000592239.1|ZNF579|ENSG00000218891.2|zinc finger protein 579
hg19_v2_chr5_+_135468516_135468621	0.0250351	UCACAGU	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr12_+_32112340_32112358	0.0249176	UCACAGU	ENST00000540924.1|KIAA1551|ENSG00000174718.7|KIAA1551 	ENST00000312561.4|KIAA1551|ENSG00000174718.7|KIAA1551
hg19_v2_chr10_-_97321112_97321163	0.0245944	UCACAGU	ENST00000607232.1|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371227.4|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371249.2|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371247.2|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371246.2|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000393949.1|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000353505.5|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000347291.4|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1
hg19_v2_chr9_-_91793675_91793698	0.0245565	UCACAGU	ENST00000375835.4|SHC3|ENSG00000148082.5|SHC (Src homology 2 domain containing) transforming protein 3 	ENST00000375830.1|SHC3|ENSG00000148082.5|SHC (Src homology 2 domain containing) transforming protein 3
hg19_v2_chr15_-_43398274_43398318	0.0243354	UCACAGU	ENST00000382177.2|UBR1|ENSG00000159459.7|ubiquitin protein ligase E3 component n-recognin 1 	ENST00000290650.4|UBR1|ENSG00000159459.7|ubiquitin protein ligase E3 component n-recognin 1
hg19_v2_chr22_-_37823468_37823528	0.0241454	UCACAGU	ENST00000402918.2|ELFN2|ENSG00000166897.10|extracellular leucine-rich repeat and fibronectin type III domain containing 2
hg19_v2_chr20_+_43514315_43514319	0.0241201	UCACAGU	ENST00000353703.4|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
hg19_v2_chr7_-_152133059_152133102	0.0238771	UCACAGU	ENST00000262189.6|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C 	ENST00000355193.2|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C
hg19_v2_chr2_+_231577532_231577639	0.0238701	UCACAGU	ENST00000258418.5|CAB39|ENSG00000135932.6|calcium binding protein 39
hg19_v2_chr9_-_14314066_14314075	0.0234945	UCACAGU	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chrX_+_30671476_30671655	0.0234176	UCACAGU	ENST00000378946.3|GK|ENSG00000198814.8|glycerol kinase 	ENST00000378943.3|GK|ENSG00000198814.8|glycerol kinase 	ENST00000378945.3|GK|ENSG00000198814.8|glycerol kinase 	ENST00000427190.1|GK|ENSG00000198814.8|glycerol kinase 	ENST00000378941.3|GK|ENSG00000198814.8|glycerol kinase
hg19_v2_chr3_+_38495333_38495422	0.0231662	UCACAGU	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr4_+_77870856_77870919	0.0231118	UCACAGU	ENST00000264893.6|SEPT11|ENSG00000138758.7|septin 11 	ENST00000502584.1|SEPT11|ENSG00000138758.7|septin 11 	ENST00000510641.1|SEPT11|ENSG00000138758.7|septin 11
hg19_v2_chr5_-_82373260_82373315	0.0226452	UCACAGU	ENST00000502346.1|TMEM167A|ENSG00000174695.5|transmembrane protein 167A
hg19_v2_chr11_-_77532050_77532066	0.0224489	UCACAGU	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr1_-_160001737_160001790	0.0210566	UCACAGU	ENST00000368090.2|PIGM|ENSG00000143315.5|phosphatidylinositol glycan anchor biosynthesis, class M
hg19_v2_chr15_+_84322827_84322861	0.0210045	UCACAGU	ENST00000286744.5|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3 	ENST00000567476.1|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3
hg19_v2_chr1_+_110453203_110453255	0.0206543	UCACAGU	ENST00000357302.4|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage) 	ENST00000344188.5|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage) 	ENST00000329608.6|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage)
hg19_v2_chr3_+_43732362_43732408	0.0206364	UCACAGU	ENST00000458276.2|ABHD5|ENSG00000011198.3|abhydrolase domain containing 5
hg19_v2_chr2_-_176032843_176032941	0.0203147	UCACAGU	ENST00000392544.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000409499.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000426833.3|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000392543.2|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000538946.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000487334.2|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000409833.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000409635.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000264110.2|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000345739.5|ATF2|ENSG00000115966.12|activating transcription factor 2
hg19_v2_chr15_+_33010175_33010211	0.0196586	UCACAGU	ENST00000300177.4|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist 	ENST00000560677.1|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist 	ENST00000560830.1|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist
hg19_v2_chr1_+_154300217_154300276	0.0196174	UCACAGU	ENST00000368489.3|ATP8B2|ENSG00000143515.12|ATPase, aminophospholipid transporter, class I, type 8B, member 2
hg19_v2_chr18_+_32073253_32073339	0.0195391	UCACAGU	ENST00000283365.9|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000596745.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000315456.6|DTNA|ENSG00000134769.17|dystrobrevin, alpha
hg19_v2_chr14_+_52118576_52118673	0.0194048	UCACAGU	ENST00000395718.2|FRMD6|ENSG00000139926.11|FERM domain containing 6 	ENST00000344768.5|FRMD6|ENSG00000139926.11|FERM domain containing 6
hg19_v2_chr13_-_107187462_107187462	0.0192187	UCACAGU	ENST00000245323.4|EFNB2|ENSG00000125266.6|ephrin-B2
hg19_v2_chr7_-_27183263_27183287	0.018858	UCACAGU	ENST00000222726.3|HOXA5|ENSG00000106004.4|homeobox A5
hg19_v2_chr15_-_75249793_75249810	0.0187713	UCACAGU	ENST00000322177.5|RPP25|ENSG00000178718.5|ribonuclease P/MRP 25kDa subunit
hg19_v2_chr13_+_24734844_24734873	0.0184781	UCACAGU	ENST00000382108.3|SPATA13|ENSG00000182957.11|spermatogenesis associated 13
hg19_v2_chr11_+_118307179_118307228	0.0182677	UCACAGU	ENST00000534358.1|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000531904.2|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000389506.5|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000354520.4|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A
hg19_v2_chr17_-_49337392_49337465	0.0182493	UCACAGU	ENST00000376381.2|MBTD1|ENSG00000011258.11|mbt domain containing 1 	ENST00000586178.1|MBTD1|ENSG00000011258.11|mbt domain containing 1
hg19_v2_chr4_+_148402069_148402099	0.0179639	UCACAGU	ENST00000358556.4|EDNRA|ENSG00000151617.11|endothelin receptor type A 	ENST00000339690.5|EDNRA|ENSG00000151617.11|endothelin receptor type A 	ENST00000511804.1|EDNRA|ENSG00000151617.11|endothelin receptor type A 	ENST00000324300.5|EDNRA|ENSG00000151617.11|endothelin receptor type A
hg19_v2_chr17_+_57408994_57409088	0.0178456	UCACAGU	ENST00000312655.4|YPEL2|ENSG00000175155.4|yippee-like 2 (Drosophila)
hg19_v2_chr14_+_71108460_71108508	0.0176831	UCACAGU	ENST00000256367.2|TTC9|ENSG00000133985.2|tetratricopeptide repeat domain 9
hg19_v2_chr12_-_92539614_92539673	0.0175728	UCACAGU	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chr12_+_67663056_67663067	0.0175416	UCACAGU	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr12_+_120884222_120884380	0.0172713	UCACAGU	ENST00000551765.1|GATC|ENSG00000257218.1|glutamyl-tRNA(Gln) amidotransferase, subunit C 	ENST00000229384.5|GATC|ENSG00000257218.1|glutamyl-tRNA(Gln) amidotransferase, subunit C
hg19_v2_chr17_-_53499310_53499353	0.0171146	UCACAGU	ENST00000262065.3|MMD|ENSG00000108960.3|monocyte to macrophage differentiation-associated
hg19_v2_chr12_+_120031264_120031264	0.0170055	UCACAGU	ENST00000426426.1|TMEM233|ENSG00000224982.2|transmembrane protein 233
hg19_v2_chr3_+_169684553_169684616	0.016448	UCACAGU	ENST00000337002.4|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae) 	ENST00000480708.1|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae)
hg19_v2_chrX_-_73834449_73834481	0.0162767	UCACAGU	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chr1_+_24286287_24286326	0.016229	UCACAGU	ENST00000334351.7|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2 	ENST00000374468.1|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2
hg19_v2_chr4_-_22517620_22517712	0.0160825	UCACAGU	ENST00000502482.1|GPR125|ENSG00000152990.9|G protein-coupled receptor 125 	ENST00000334304.5|GPR125|ENSG00000152990.9|G protein-coupled receptor 125
hg19_v2_chr9_+_109625378_109625458	0.0159111	UCACAGU	ENST00000277225.5|ZNF462|ENSG00000148143.8|zinc finger protein 462 	ENST00000457913.1|ZNF462|ENSG00000148143.8|zinc finger protein 462 	ENST00000472574.1|ZNF462|ENSG00000148143.8|zinc finger protein 462
hg19_v2_chr7_-_81399438_81399514	0.0154563	UCACAGU	ENST00000222390.5|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr21_-_36260980_36261011	0.015379	UCACAGU	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr20_+_62795827_62795878	0.0151049	UCACAGU	ENST00000328439.1|MYT1|ENSG00000196132.7|myelin transcription factor 1 	ENST00000536311.1|MYT1|ENSG00000196132.7|myelin transcription factor 1
hg19_v2_chr9_-_36400213_36400296	0.0147013	UCACAGU	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr2_-_100939195_100939195	0.0146357	UCACAGU	ENST00000393437.3|LONRF2|ENSG00000170500.8|LON peptidase N-terminal domain and ring finger 2
hg19_v2_chr9_+_129677039_129677119	0.0134236	UCACAGU	ENST00000259351.5|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000424082.2|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000394022.3|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000394011.3|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000319107.4|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1
hg19_v2_chr6_+_34759837_34759964	0.0125235	UCACAGU	ENST00000192788.5|UHRF1BP1|ENSG00000065060.12|UHRF1 binding protein 1 	ENST00000452449.2|UHRF1BP1|ENSG00000065060.12|UHRF1 binding protein 1
hg19_v2_chr19_-_344786_344826	0.0122869	UCACAGU	ENST00000264819.4|MIER2|ENSG00000105556.6|mesoderm induction early response 1, family member 2
hg19_v2_chr17_-_60142609_60142657	0.0122017	UCACAGU	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr6_+_117586713_117586737	0.0116056	UCACAGU	ENST00000352536.3|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila) 	ENST00000326274.5|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila)
hg19_v2_chr7_+_91875508_91875559	0.0114648	UCACAGU	ENST00000265742.3|ANKIB1|ENSG00000001629.5|ankyrin repeat and IBR domain containing 1
hg19_v2_chrX_+_37430822_37430914	0.0108087	UCACAGU	ENST00000378621.3|LANCL3|ENSG00000147036.7|LanC lantibiotic synthetase component C-like 3 (bacterial) 	ENST00000378619.3|LANCL3|ENSG00000147036.7|LanC lantibiotic synthetase component C-like 3 (bacterial)
hg19_v2_chr16_+_57126428_57126450	0.0105983	UCACAGU	ENST00000290776.8|CPNE2|ENSG00000140848.12|copine II
hg19_v2_chr2_+_208576355_208576475	0.0104583	UCACAGU	ENST00000420822.1|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000295414.3|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000339882.5|CCNYL1|ENSG00000163249.5|cyclin Y-like 1
hg19_v2_chr17_+_61627814_61627871	0.0102926	UCACAGU	ENST00000310827.4|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000431926.1|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000415273.2|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7
hg19_v2_chr6_+_168841817_168841848	0.0102716	UCACAGU	ENST00000356284.2|SMOC2|ENSG00000112562.14|SPARC related modular calcium binding 2 	ENST00000354536.5|SMOC2|ENSG00000112562.14|SPARC related modular calcium binding 2
hg19_v2_chr1_+_244214577_244214593	0.00999524	UCACAGU	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr4_-_90229142_90229217	0.00991982	UCACAGU	ENST00000609438.1|GPRIN3|ENSG00000185477.4|GPRIN family member 3
hg19_v2_chr4_+_134070439_134070470	0.00984945	UCACAGU	ENST00000264360.5|PCDH10|ENSG00000138650.7|protocadherin 10
hg19_v2_chr1_+_228194693_228194783	0.00982043	UCACAGU	ENST00000284523.1|WNT3A|ENSG00000154342.4|wingless-type MMTV integration site family, member 3A 	ENST00000366753.2|WNT3A|ENSG00000154342.4|wingless-type MMTV integration site family, member 3A
hg19_v2_chr1_-_225840747_225840860	0.00977764	UCACAGU	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr3_+_98451275_98451361	0.00971791	UCACAGU	ENST00000265261.6|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6 	ENST00000497008.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr15_-_102192567_102192597	0.00930514	UCACAGU	ENST00000333202.3|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000428002.2|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000559107.1|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000347970.3|TM2D3|ENSG00000184277.8|TM2 domain containing 3
hg19_v2_chr2_-_24149977_24150007	0.0090107	UCACAGU	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr11_+_110300607_110300692	0.00861817	UCACAGU	ENST00000260270.2|FDX1|ENSG00000137714.2|ferredoxin 1
hg19_v2_chr12_-_77272765_77272840	0.00860803	UCACAGU	ENST00000547435.1|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2 	ENST00000552330.1|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2 	ENST00000546966.1|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2 	ENST00000311083.5|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2
hg19_v2_chr19_+_11200038_11200155	0.00803396	UCACAGU	ENST00000558518.1|LDLR|ENSG00000130164.7|low density lipoprotein receptor 	ENST00000557933.1|LDLR|ENSG00000130164.7|low density lipoprotein receptor 	ENST00000455727.2|LDLR|ENSG00000130164.7|low density lipoprotein receptor 	ENST00000535915.1|LDLR|ENSG00000130164.7|low density lipoprotein receptor 	ENST00000545707.1|LDLR|ENSG00000130164.7|low density lipoprotein receptor 	ENST00000558013.1|LDLR|ENSG00000130164.7|low density lipoprotein receptor
hg19_v2_chr11_-_10315741_10315773	0.00739926	UCACAGU	ENST00000256190.8|SBF2|ENSG00000133812.10|SET binding factor 2
hg19_v2_chr1_-_93645818_93645918	0.00735143	UCACAGU	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chrX_-_25034065_25034088	0.00716913	UCACAGU	ENST00000379044.4|ARX|ENSG00000004848.6|aristaless related homeobox
hg19_v2_chrX_+_23352133_23352229	0.00711729	UCACAGU	ENST00000379361.4|PTCHD1|ENSG00000165186.9|patched domain containing 1
hg19_v2_chr6_+_170102210_170102275	0.00705844	UCACAGU	ENST00000439249.1|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120 	ENST00000332290.2|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120
hg19_v2_chr2_-_100721178_100721307	0.00704405	UCACAGU	ENST00000409236.2|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3
hg19_v2_chr15_-_85201779_85201794	0.00667156	UCACAGU	ENST00000360476.3|NMB|ENSG00000197696.5|neuromedin B 	ENST00000394588.3|NMB|ENSG00000197696.5|neuromedin B
hg19_v2_chr16_+_66914264_66914516	0.0064151	UCACAGU	ENST00000311765.2|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568869.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000561704.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568398.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000566776.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2
hg19_v2_chr3_-_119813264_119813272	0.0060272	UCACAGU	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr17_+_54911444_54911564	0.00598079	UCACAGU	ENST00000284061.3|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa 	ENST00000572810.1|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa
hg19_v2_chr8_-_97173020_97173041	0.0058171	UCACAGU	ENST00000287020.5|GDF6|ENSG00000156466.8|growth differentiation factor 6
hg19_v2_chr11_+_101981169_101981210	0.00560803	UCACAGU	ENST00000526343.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000282441.5|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000537274.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000345877.2|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr16_+_66400533_66400545	0.00549571	UCACAGU	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr3_+_141205852_141205929	0.00516973	UCACAGU	ENST00000286364.3|RASA2|ENSG00000155903.7|RAS p21 protein activator 2 	ENST00000452898.1|RASA2|ENSG00000155903.7|RAS p21 protein activator 2
hg19_v2_chr5_+_110559784_110559803	0.00510064	UCACAGU	ENST00000282356.4|CAMK4|ENSG00000152495.6|calcium/calmodulin-dependent protein kinase IV
hg19_v2_chr5_-_176981417_176981508	0.00509953	UCACAGU	ENST00000514747.1|FAM193B|ENSG00000146067.11|family with sequence similarity 193, member B 	ENST00000443375.2|FAM193B|ENSG00000146067.11|family with sequence similarity 193, member B 	ENST00000329540.5|FAM193B|ENSG00000146067.11|family with sequence similarity 193, member B
hg19_v2_chr6_+_163835669_163835693	0.0048357	UCACAGU	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr18_-_268019_268064	0.00469309	UCACAGU	ENST00000261600.6|THOC1|ENSG00000079134.7|THO complex 1
hg19_v2_chr2_+_157291953_157292003	0.00450913	UCACAGU	ENST00000310454.6|GPD2|ENSG00000115159.11|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg19_v2_chr17_-_35969409_35969544	0.00432423	UCACAGU	ENST00000394378.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585472.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000591288.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000502449.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000345615.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000346661.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585689.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000339208.6|SYNRG|ENSG00000006114.11|synergin, gamma
hg19_v2_chr6_-_33267101_33267170	0.00426133	UCACAGU	ENST00000497454.1|RGL2|ENSG00000237441.5|ral guanine nucleotide dissociation stimulator-like 2
hg19_v2_chr6_+_30524663_30524799	0.00314175	UCACAGU	ENST00000376560.3|PRR3|ENSG00000204576.7|proline rich 3
hg19_v2_chr3_-_113415441_113415500	0.00282704	UCACAGU	ENST00000491165.1|KIAA2018|ENSG00000176542.5|KIAA2018 	ENST00000316407.4|KIAA2018|ENSG00000176542.5|KIAA2018
hg19_v2_chr6_+_133562472_133562556	0.00235933	UCACAGU	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chr2_+_204571198_204571283	0.00233575	UCACAGU	ENST00000374481.3|CD28|ENSG00000178562.13|CD28 molecule 	ENST00000458610.2|CD28|ENSG00000178562.13|CD28 molecule 	ENST00000324106.8|CD28|ENSG00000178562.13|CD28 molecule
hg19_v2_chr6_-_17706618_17706666	0.00224501	UCACAGU	ENST00000262077.2|NUP153|ENSG00000124789.7|nucleoporin 153kDa 	ENST00000537253.1|NUP153|ENSG00000124789.7|nucleoporin 153kDa
hg19_v2_chr10_+_52751010_52751118	0.00192005	UCACAGU	ENST00000373985.1|PRKG1|ENSG00000185532.10|protein kinase, cGMP-dependent, type I
hg19_v2_chr12_-_63328817_63328870	0.00185498	UCACAGU	ENST00000228705.6|PPM1H|ENSG00000111110.7|protein phosphatase, Mg2+/Mn2+ dependent, 1H
hg19_v2_chr5_-_132073210_132073330	0.00162654	UCACAGU	ENST00000378735.1|KIF3A|ENSG00000131437.11|kinesin family member 3A 	ENST00000378746.4|KIF3A|ENSG00000131437.11|kinesin family member 3A
hg19_v2_chr4_-_39640700_39640712	0.000993484	UCACAGU	ENST00000295958.5|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr12_+_72056773_72056796	0.000944253	UCACAGU	ENST00000308086.2|THAP2|ENSG00000173451.2|THAP domain containing, apoptosis associated protein 2
hg19_v2_chr12_-_25403737_25403881	0.000784502	UCACAGU	ENST00000256078.4|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000556131.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000311936.3|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000557334.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog
hg19_v2_chr19_-_16653325_16653358	0.000260871	UCACAGU	ENST00000546361.2|CHERP|ENSG00000085872.10|calcium homeostasis endoplasmic reticulum protein
hg19_v2_chr6_+_118228657_118228715	0.000117021	UCACAGU	ENST00000360388.4|SLC35F1|ENSG00000196376.6|solute carrier family 35, member F1
hg19_v2_chr14_-_39901618_39901704	3.53056e-05	UCACAGU	ENST00000554932.1|FBXO33|ENSG00000165355.7|F-box protein 33 	ENST00000298097.7|FBXO33|ENSG00000165355.7|F-box protein 33
