hg19_v2_chr14_-_31495569_31495636	0.468647	UACAGUA	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chr15_-_37390482_37390572	0.416361	UACAGUA	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr15_+_52311398_52311461	0.39618	UACAGUA	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr8_-_103876965_103877012	0.349646	UACAGUA	ENST00000337198.5|AZIN1|ENSG00000155096.9|antizyme inhibitor 1
hg19_v2_chr1_-_169455169_169455241	0.334535	UACAGUA	ENST00000367804.4|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2 	ENST00000236137.5|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2
hg19_v2_chr10_+_93558069_93558154	0.323225	UACAGUA	ENST00000371627.4|TNKS2|ENSG00000107854.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v2_chr10_+_60094735_60094749	0.319542	UACAGUA	ENST00000373910.4|UBE2D1|ENSG00000072401.10|ubiquitin-conjugating enzyme E2D 1
hg19_v2_chr14_-_53162361_53162513	0.313507	UACAGUA	ENST00000395686.3|ERO1L|ENSG00000197930.8|ERO1-like (S. cerevisiae)
hg19_v2_chr22_+_50247449_50247515	0.311015	UACAGUA	ENST00000216268.5|ZBED4|ENSG00000100426.6|zinc finger, BED-type containing 4
hg19_v2_chr8_+_17354587_17354610	0.295667	UACAGUA	ENST00000494857.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 	ENST00000522656.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
hg19_v2_chr1_-_63988846_63988908	0.295255	UACAGUA	ENST00000283568.8|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin) 	ENST00000371092.3|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin) 	ENST00000271002.10|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin)
hg19_v2_chr1_-_235491462_235491534	0.283153	UACAGUA	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr6_-_130031358_130031378	0.276896	UACAGUA	ENST00000368149.2|ARHGAP18|ENSG00000146376.6|Rho GTPase activating protein 18
hg19_v2_chr15_+_57210818_57210930	0.268636	UACAGUA	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr10_-_98346801_98346812	0.266048	UACAGUA	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr10_+_112327425_112327516	0.263653	UACAGUA	ENST00000361804.4|SMC3|ENSG00000108055.9|structural maintenance of chromosomes 3
hg19_v2_chr9_+_91003271_91003386	0.252258	UACAGUA	ENST00000375859.3|SPIN1|ENSG00000106723.12|spindlin 1 	ENST00000541629.1|SPIN1|ENSG00000106723.12|spindlin 1
hg19_v2_chr8_-_82598511_82598570	0.251851	UACAGUA	ENST00000449740.2|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000311489.4|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000521360.1|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000519964.1|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000518202.1|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1
hg19_v2_chr3_-_98620500_98620547	0.25026	UACAGUA	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr1_+_200708671_200708744	0.246905	UACAGUA	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr2_-_43453734_43453751	0.239236	UACAGUA	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chrX_-_77041685_77041716	0.236585	UACAGUA	ENST00000373344.5|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked 	ENST00000395603.3|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked
hg19_v2_chr4_-_78740511_78740544	0.233706	UACAGUA	ENST00000504123.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000264903.4|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000515441.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like
hg19_v2_chr16_-_10674528_10674555	0.228636	UACAGUA	ENST00000359543.3|EMP2|ENSG00000213853.5|epithelial membrane protein 2
hg19_v2_chr9_-_123476719_123476810	0.226692	UACAGUA	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr9_+_116638562_116638606	0.219349	UACAGUA	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr12_-_76478686_76478813	0.217664	UACAGUA	ENST00000261182.8|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr11_-_95657231_95657459	0.216385	UACAGUA	ENST00000409459.1|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000352297.7|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000393223.3|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000346299.5|MTMR2|ENSG00000087053.14|myotubularin related protein 2
hg19_v2_chr12_-_30848914_30848948	0.212621	UACAGUA	ENST00000256079.4|IPO8|ENSG00000133704.5|importin 8
hg19_v2_chr3_+_23986748_23986761	0.211627	UACAGUA	ENST00000312521.4|NR1D2|ENSG00000174738.8|nuclear receptor subfamily 1, group D, member 2
hg19_v2_chr3_+_105085734_105085760	0.210885	UACAGUA	ENST00000306107.5|ALCAM|ENSG00000170017.8|activated leukocyte cell adhesion molecule
hg19_v2_chr3_-_178790057_178790072	0.210505	UACAGUA	ENST00000311417.2|ZMAT3|ENSG00000172667.6|zinc finger, matrin-type 3
hg19_v2_chr21_-_34144157_34144175	0.209961	UACAGUA	ENST00000331923.4|PAXBP1|ENSG00000159086.10|PAX3 and PAX7 binding protein 1
hg19_v2_chr5_+_60628074_60628100	0.208933	UACAGUA	ENST00000252744.5|ZSWIM6|ENSG00000130449.5|zinc finger, SWIM-type containing 6
hg19_v2_chr4_+_106816592_106816608	0.203217	UACAGUA	ENST00000379987.2|NPNT|ENSG00000168743.8|nephronectin 	ENST00000453617.2|NPNT|ENSG00000168743.8|nephronectin 	ENST00000427316.2|NPNT|ENSG00000168743.8|nephronectin 	ENST00000514622.1|NPNT|ENSG00000168743.8|nephronectin 	ENST00000305572.8|NPNT|ENSG00000168743.8|nephronectin
hg19_v2_chr10_+_115674530_115674530	0.199701	UACAGUA	ENST00000451472.1|AL162407.1|ENSG00000234631.1|CDNA FLJ20147 fis, clone COL07954; HCG1781466; Uncharacterized protein
hg19_v2_chr6_-_85474219_85474237	0.197714	UACAGUA	ENST00000369663.5|TBX18|ENSG00000112837.12|T-box 18
hg19_v2_chr12_+_104359576_104359601	0.193741	UACAGUA	ENST00000392872.3|TDG|ENSG00000139372.10|thymine-DNA glycosylase 	ENST00000436021.2|TDG|ENSG00000139372.10|thymine-DNA glycosylase
hg19_v2_chr5_+_127419449_127419540	0.192189	UACAGUA	ENST00000262461.2|SLC12A2|ENSG00000064651.9|solute carrier family 12 (sodium/potassium/chloride transporter), member 2 	ENST00000343225.4|SLC12A2|ENSG00000064651.9|solute carrier family 12 (sodium/potassium/chloride transporter), member 2
hg19_v2_chr4_-_99851766_99851788	0.191195	UACAGUA	ENST00000450253.2|EIF4E|ENSG00000151247.8|eukaryotic translation initiation factor 4E
hg19_v2_chr3_-_138553594_138553684	0.187139	UACAGUA	ENST00000477593.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta 	ENST00000483968.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
hg19_v2_chr5_-_142783175_142783297	0.184593	UACAGUA	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr12_-_88974236_88974256	0.184218	UACAGUA	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chr4_+_95679072_95679125	0.181583	UACAGUA	ENST00000515059.1|BMPR1B|ENSG00000138696.6|bone morphogenetic protein receptor, type IB
hg19_v2_chr3_+_152017181_152017229	0.181471	UACAGUA	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr18_+_9136758_9136852	0.180526	UACAGUA	ENST00000383440.2|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000262126.4|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000577992.1|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12
hg19_v2_chr4_+_140222609_140222742	0.175365	UACAGUA	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr15_+_39873268_39873294	0.174373	UACAGUA	ENST00000397591.2|THBS1|ENSG00000137801.9|thrombospondin 1 	ENST00000260356.5|THBS1|ENSG00000137801.9|thrombospondin 1
hg19_v2_chr10_+_95256356_95256408	0.173983	UACAGUA	ENST00000371485.3|CEP55|ENSG00000138180.11|centrosomal protein 55kDa
hg19_v2_chr19_-_4066890_4066943	0.172548	UACAGUA	ENST00000322357.4|ZBTB7A|ENSG00000178951.4|zinc finger and BTB domain containing 7A
hg19_v2_chr14_-_64010046_64010107	0.16976	UACAGUA	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr1_-_93645818_93645918	0.167364	UACAGUA	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr15_+_96873921_96873946	0.165107	UACAGUA	ENST00000394166.3|NR2F2|ENSG00000185551.8|nuclear receptor subfamily 2, group F, member 2
hg19_v2_chr2_-_182545603_182545603	0.16241	UACAGUA	ENST00000295108.3|NEUROD1|ENSG00000162992.3|neuronal differentiation 1
hg19_v2_chr2_+_60983361_60983418	0.15952	UACAGUA	ENST00000238714.3|PAPOLG|ENSG00000115421.8|poly(A) polymerase gamma
hg19_v2_chr5_+_82767284_82767310	0.157706	UACAGUA	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr2_+_118846008_118846100	0.155607	UACAGUA	ENST00000245787.4|INSIG2|ENSG00000125629.10|insulin induced gene 2
hg19_v2_chr16_-_70719925_70719989	0.154159	UACAGUA	ENST00000338779.6|MTSS1L|ENSG00000132613.10|metastasis suppressor 1-like
hg19_v2_chr3_-_176914238_176914277	0.153326	UACAGUA	ENST00000430069.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1 	ENST00000428970.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1
hg19_v2_chr10_+_98592009_98592061	0.153053	UACAGUA	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr1_+_198126093_198126207	0.150897	UACAGUA	ENST00000367385.4|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000442588.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000538004.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7
hg19_v2_chrX_+_21857717_21857763	0.150484	UACAGUA	ENST00000379484.5|MBTPS2|ENSG00000012174.7|membrane-bound transcription factor peptidase, site 2
hg19_v2_chr17_+_28705921_28706000	0.149355	UACAGUA	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr4_-_76598296_76598318	0.148642	UACAGUA	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr8_+_104311059_104311132	0.147797	UACAGUA	ENST00000358755.4|FZD6|ENSG00000164930.7|frizzled family receptor 6 	ENST00000523739.1|FZD6|ENSG00000164930.7|frizzled family receptor 6 	ENST00000540287.1|FZD6|ENSG00000164930.7|frizzled family receptor 6
hg19_v2_chr15_-_83876758_83876770	0.147275	UACAGUA	ENST00000299633.4|HDGFRP3|ENSG00000166503.4|Hepatoma-derived growth factor-related protein 3
hg19_v2_chr5_+_86564739_86564791	0.145738	UACAGUA	ENST00000456692.2|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000512763.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000506290.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1
hg19_v2_chr11_+_82868030_82868179	0.145721	UACAGUA	ENST00000298281.4|PCF11|ENSG00000165494.6|PCF11 cleavage and polyadenylation factor subunit 	ENST00000530660.1|PCF11|ENSG00000165494.6|PCF11 cleavage and polyadenylation factor subunit
hg19_v2_chr12_+_68042495_68042508	0.144801	UACAGUA	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chrX_-_100604184_100604184	0.143981	UACAGUA	ENST00000372902.3|TIMM8A|ENSG00000126953.5|translocase of inner mitochondrial membrane 8 homolog A (yeast)
hg19_v2_chr12_-_31744031_31744059	0.142926	UACAGUA	ENST00000389082.5|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr7_+_139044621_139044725	0.142739	UACAGUA	ENST00000354926.4|C7orf55-LUC7L2|ENSG00000146963.13|C7orf55-LUC7L2 readthrough
hg19_v2_chr4_-_71705590_71705662	0.142392	UACAGUA	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr11_-_95522907_95522989	0.14143	UACAGUA	ENST00000358780.5|FAM76B|ENSG00000077458.8|family with sequence similarity 76, member B 	ENST00000542135.1|FAM76B|ENSG00000077458.8|family with sequence similarity 76, member B
hg19_v2_chr2_+_61108650_61108687	0.141339	UACAGUA	ENST00000295025.8|REL|ENSG00000162924.9|v-rel avian reticuloendotheliosis viral oncogene homolog
hg19_v2_chr4_+_108745711_108745726	0.140436	UACAGUA	ENST00000394684.4|SGMS2|ENSG00000164023.10|sphingomyelin synthase 2
hg19_v2_chr17_+_70117153_70117174	0.140153	UACAGUA	ENST00000245479.2|SOX9|ENSG00000125398.5|SRY (sex determining region Y)-box 9
hg19_v2_chr8_+_125486939_125487026	0.139995	UACAGUA	ENST00000303545.3|RNF139|ENSG00000170881.4|ring finger protein 139
hg19_v2_chr21_-_27542972_27543138	0.13932	UACAGUA	ENST00000346798.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000439274.2|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000354192.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000348990.5|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000357903.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000358918.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000359726.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr5_-_79287060_79287093	0.138998	UACAGUA	ENST00000512560.1|MTX3|ENSG00000177034.10|metaxin 3 	ENST00000509852.1|MTX3|ENSG00000177034.10|metaxin 3 	ENST00000512528.1|MTX3|ENSG00000177034.10|metaxin 3
hg19_v2_chr15_+_77223960_77223994	0.13795	UACAGUA	ENST00000394885.3|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain
hg19_v2_chrX_+_103411189_103411301	0.136929	UACAGUA	ENST00000493442.1|FAM199X|ENSG00000123575.8|family with sequence similarity 199, X-linked
hg19_v2_chr15_+_59279851_59279880	0.136657	UACAGUA	ENST00000348370.4|RNF111|ENSG00000157450.11|ring finger protein 111 	ENST00000434298.1|RNF111|ENSG00000157450.11|ring finger protein 111 	ENST00000559160.1|RNF111|ENSG00000157450.11|ring finger protein 111
hg19_v2_chr6_-_53213780_53213947	0.136257	UACAGUA	ENST00000304434.6|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370918.4|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr11_-_96076334_96076419	0.134638	UACAGUA	ENST00000524717.1|MAML2|ENSG00000184384.9|mastermind-like 2 (Drosophila)
hg19_v2_chr3_+_15247686_15247784	0.134129	UACAGUA	ENST00000253693.2|CAPN7|ENSG00000131375.5|calpain 7
hg19_v2_chr12_-_31479045_31479074	0.133279	UACAGUA	ENST00000539409.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A 	ENST00000395766.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr12_+_4430371_4430429	0.132703	UACAGUA	ENST00000179259.4|C12orf5|ENSG00000078237.4|chromosome 12 open reading frame 5
hg19_v2_chr9_-_14693417_14693469	0.132423	UACAGUA	ENST00000380916.4|ZDHHC21|ENSG00000175893.7|zinc finger, DHHC-type containing 21
hg19_v2_chr4_-_53525406_53525502	0.131719	UACAGUA	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr10_+_120789223_120789231	0.130523	UACAGUA	ENST00000425699.1|NANOS1|ENSG00000188613.5|nanos homolog 1 (Drosophila)
hg19_v2_chr5_-_111093406_111093458	0.130224	UACAGUA	ENST00000379671.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr7_+_115850547_115850626	0.12733	UACAGUA	ENST00000358204.4|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains) 	ENST00000455989.1|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains) 	ENST00000537767.1|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains)
hg19_v2_chr2_+_56411131_56411258	0.127088	UACAGUA	ENST00000407595.2|CCDC85A|ENSG00000055813.5|coiled-coil domain containing 85A
hg19_v2_chr6_-_82462425_82462491	0.126737	UACAGUA	ENST00000369754.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000320172.6|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000369756.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A
hg19_v2_chr8_-_105601134_105601252	0.126656	UACAGUA	ENST00000276654.5|LRP12|ENSG00000147650.7|low density lipoprotein receptor-related protein 12 	ENST00000424843.2|LRP12|ENSG00000147650.7|low density lipoprotein receptor-related protein 12
hg19_v2_chr9_-_95527079_95527148	0.126324	UACAGUA	ENST00000356884.6|BICD2|ENSG00000185963.9|bicaudal D homolog 2 (Drosophila) 	ENST00000375512.3|BICD2|ENSG00000185963.9|bicaudal D homolog 2 (Drosophila)
hg19_v2_chr8_-_125384927_125384952	0.124844	UACAGUA	ENST00000297632.6|TMEM65|ENSG00000164983.6|transmembrane protein 65
hg19_v2_chr7_-_124405681_124405709	0.124606	UACAGUA	ENST00000303921.2|GPR37|ENSG00000170775.2|G protein-coupled receptor 37 (endothelin receptor type B-like)
hg19_v2_chr4_+_38665810_38665827	0.124347	UACAGUA	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr2_+_28974668_28974729	0.123446	UACAGUA	ENST00000296122.6|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme 	ENST00000395366.2|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr7_-_127032741_127032777	0.122759	UACAGUA	ENST00000393313.1|ZNF800|ENSG00000048405.5|zinc finger protein 800 	ENST00000265827.3|ZNF800|ENSG00000048405.5|zinc finger protein 800 	ENST00000434602.1|ZNF800|ENSG00000048405.5|zinc finger protein 800
hg19_v2_chr2_+_135676381_135676435	0.122749	UACAGUA	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr16_-_46723066_46723121	0.122686	UACAGUA	ENST00000299138.7|VPS35|ENSG00000069329.11|vacuolar protein sorting 35 homolog (S. cerevisiae)
hg19_v2_chr4_+_72204755_72204778	0.121957	UACAGUA	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr5_+_52776228_52776245	0.121136	UACAGUA	ENST00000256759.3|FST|ENSG00000134363.7|follistatin
hg19_v2_chr3_+_150321068_150321123	0.119512	UACAGUA	ENST00000471696.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000477889.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000485923.1|SELT|ENSG00000198843.8|Selenoprotein T
hg19_v2_chr7_-_92463210_92463231	0.118806	UACAGUA	ENST00000265734.4|CDK6|ENSG00000105810.5|cyclin-dependent kinase 6
hg19_v2_chr18_-_52626622_52626739	0.118525	UACAGUA	ENST00000591504.1|CCDC68|ENSG00000166510.9|coiled-coil domain containing 68
hg19_v2_chr3_-_88108192_88108203	0.118512	UACAGUA	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr10_-_105615164_105615323	0.116797	UACAGUA	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr4_+_99916765_99916776	0.115511	UACAGUA	ENST00000296411.6|METAP1|ENSG00000164024.7|methionyl aminopeptidase 1
hg19_v2_chr1_+_178062855_178062903	0.113445	UACAGUA	ENST00000448150.3|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chr4_+_78078304_78078406	0.112759	UACAGUA	ENST00000316355.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000354403.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000502280.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr8_-_74791051_74791145	0.111545	UACAGUA	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr4_+_144434584_144434709	0.110962	UACAGUA	ENST00000283131.3|SMARCA5|ENSG00000153147.5|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg19_v2_chr2_+_201676256_201676323	0.11089	UACAGUA	ENST00000452206.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000410110.2|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000409600.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1
hg19_v2_chr8_-_95961578_95961639	0.110728	UACAGUA	ENST00000448464.2|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1 	ENST00000342697.4|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1
hg19_v2_chr18_-_18691739_18691812	0.110271	UACAGUA	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr2_+_191273052_191273121	0.109067	UACAGUA	ENST00000417958.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000432036.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000392328.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr2_-_55844720_55844772	0.108901	UACAGUA	ENST00000345102.5|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium) 	ENST00000272313.5|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium) 	ENST00000407823.3|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium)
hg19_v2_chr17_-_4269768_4269835	0.108023	UACAGUA	ENST00000396981.2|UBE2G1|ENSG00000132388.8|ubiquitin-conjugating enzyme E2G 1
hg19_v2_chr12_-_15942309_15942330	0.107823	UACAGUA	ENST00000544064.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8 	ENST00000543523.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8 	ENST00000536793.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8
hg19_v2_chr17_-_58603568_58603610	0.107147	UACAGUA	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr10_+_93683519_93683594	0.105176	UACAGUA	ENST00000265990.6|BTAF1|ENSG00000095564.9|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
hg19_v2_chr19_-_47735918_47736023	0.105133	UACAGUA	ENST00000449228.1|BBC3|ENSG00000105327.11|BCL2 binding component 3 	ENST00000300880.7|BBC3|ENSG00000105327.11|BCL2 binding component 3 	ENST00000341983.4|BBC3|ENSG00000105327.11|BCL2 binding component 3
hg19_v2_chr10_-_5855350_5855512	0.105041	UACAGUA	ENST00000456041.1|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000380181.3|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000418688.1|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000380132.4|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000609712.1|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000380191.4|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2
hg19_v2_chr17_-_7832753_7832753	0.10484	UACAGUA	ENST00000303790.2|KCNAB3|ENSG00000170049.5|potassium voltage-gated channel, shaker-related subfamily, beta member 3
hg19_v2_chr5_+_145583156_145583180	0.10447	UACAGUA	ENST00000265271.5|RBM27|ENSG00000091009.6|RNA binding motif protein 27
hg19_v2_chr14_-_53619816_53620056	0.103242	UACAGUA	ENST00000323669.5|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000395606.1|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000357758.3|DDHD1|ENSG00000100523.10|DDHD domain containing 1
hg19_v2_chrX_+_40944871_40944888	0.101854	UACAGUA	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr9_+_78505581_78505621	0.10176	UACAGUA	ENST00000376767.3|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5 	ENST00000376752.4|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5
hg19_v2_chr3_+_141106643_141106681	0.10122	UACAGUA	ENST00000514251.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr1_-_225615599_225615802	0.0994727	UACAGUA	ENST00000421383.1|LBR|ENSG00000143815.10|lamin B receptor 	ENST00000272163.4|LBR|ENSG00000143815.10|lamin B receptor
hg19_v2_chr16_-_71843047_71843104	0.0994248	UACAGUA	ENST00000299980.4|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000393512.3|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr15_+_44719394_44719579	0.099135	UACAGUA	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr1_-_45672221_45672260	0.0990687	UACAGUA	ENST00000359600.5|ZSWIM5|ENSG00000162415.6|zinc finger, SWIM-type containing 5
hg19_v2_chr1_+_229406847_229406935	0.0990423	UACAGUA	ENST00000366690.4|RAB4A|ENSG00000168118.7|RAB4A, member RAS oncogene family
hg19_v2_chr5_-_114880533_114880591	0.0989845	UACAGUA	ENST00000274457.3|FEM1C|ENSG00000145780.6|fem-1 homolog c (C. elegans)
hg19_v2_chr2_-_24149977_24150007	0.0983739	UACAGUA	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr2_-_228028829_228028858	0.098354	UACAGUA	ENST00000396625.3|COL4A4|ENSG00000081052.10|collagen, type IV, alpha 4 	ENST00000329662.7|COL4A4|ENSG00000081052.10|collagen, type IV, alpha 4
hg19_v2_chr10_-_118032697_118032796	0.0978573	UACAGUA	ENST00000439649.3|GFRA1|ENSG00000151892.10|GDNF family receptor alpha 1
hg19_v2_chr7_+_138145076_138145116	0.0977717	UACAGUA	ENST00000343526.4|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr4_-_102268628_102268693	0.0974719	UACAGUA	ENST00000323055.6|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000512215.1|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000394854.3|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr2_+_198380289_198380305	0.0974604	UACAGUA	ENST00000233892.4|MOB4|ENSG00000115540.10|MOB family member 4, phocein 	ENST00000409916.1|MOB4|ENSG00000115540.10|MOB family member 4, phocein
hg19_v2_chr1_-_186649543_186649563	0.0973945	UACAGUA	ENST00000367468.5|PTGS2|ENSG00000073756.7|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr19_+_32836499_32836625	0.0971992	UACAGUA	ENST00000311921.4|ZNF507|ENSG00000168813.12|zinc finger protein 507 	ENST00000544431.1|ZNF507|ENSG00000168813.12|zinc finger protein 507 	ENST00000355898.5|ZNF507|ENSG00000168813.12|zinc finger protein 507
hg19_v2_chr6_-_53409890_53409927	0.0970848	UACAGUA	ENST00000229416.6|GCLC|ENSG00000001084.6|glutamate-cysteine ligase, catalytic subunit
hg19_v2_chr3_-_121468602_121468617	0.0965096	UACAGUA	ENST00000340645.5|GOLGB1|ENSG00000173230.11|golgin B1
hg19_v2_chr5_+_172483347_172483407	0.0962714	UACAGUA	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr3_+_110790590_110790603	0.0962311	UACAGUA	ENST00000485303.1|PVRL3|ENSG00000177707.6|poliovirus receptor-related 3
hg19_v2_chr14_+_73525144_73525224	0.0962228	UACAGUA	ENST00000261973.7|RBM25|ENSG00000119707.9|RNA binding motif protein 25 	ENST00000540173.1|RBM25|ENSG00000119707.9|RNA binding motif protein 25
hg19_v2_chr4_-_114682936_114683083	0.0958733	UACAGUA	ENST00000454265.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000429180.1|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000418639.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000394526.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000296402.5|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta
hg19_v2_chr8_-_101965146_101965236	0.0953809	UACAGUA	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr7_-_75988321_75988348	0.095357	UACAGUA	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr1_+_116184566_116184633	0.0949575	UACAGUA	ENST00000355485.2|VANGL1|ENSG00000173218.10|VANGL planar cell polarity protein 1 	ENST00000369510.4|VANGL1|ENSG00000173218.10|VANGL planar cell polarity protein 1
hg19_v2_chr14_-_82000140_82000229	0.0938112	UACAGUA	ENST00000555824.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000557372.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000336735.4|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans)
hg19_v2_chr2_-_65357225_65357267	0.0936242	UACAGUA	ENST00000398529.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409751.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000356214.7|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409892.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409784.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family
hg19_v2_chr12_+_52203789_52203789	0.0930403	UACAGUA	ENST00000599343.1|AC068987.1|ENSG00000260415.3|HCG1997999; cDNA FLJ33996 fis, clone DFNES2008881
hg19_v2_chr18_-_47721447_47721474	0.0928482	UACAGUA	ENST00000285039.7|MYO5B|ENSG00000167306.14|myosin VB
hg19_v2_chr3_+_37284668_37284771	0.0928398	UACAGUA	ENST00000361924.2|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000444882.1|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000356847.4|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000450863.2|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000429018.1|GOLGA4|ENSG00000144674.12|golgin A4
hg19_v2_chr3_+_19988566_19988648	0.0926403	UACAGUA	ENST00000273047.4|RAB5A|ENSG00000144566.6|RAB5A, member RAS oncogene family
hg19_v2_chr21_-_43430440_43430496	0.0925475	UACAGUA	ENST00000398505.3|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21 	ENST00000310826.5|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21 	ENST00000449949.1|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21 	ENST00000398499.1|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21 	ENST00000398497.2|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21 	ENST00000398511.3|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21
hg19_v2_chr17_+_55333876_55333939	0.0924359	UACAGUA	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr6_+_64345698_64345750	0.0922743	UACAGUA	ENST00000506783.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000481385.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000515594.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000494284.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000262043.3|PHF3|ENSG00000118482.7|PHD finger protein 3
hg19_v2_chr10_+_96162242_96162283	0.0918605	UACAGUA	ENST00000225235.4|TBC1D12|ENSG00000108239.8|TBC1 domain family, member 12
hg19_v2_chr2_+_113033164_113033219	0.0913273	UACAGUA	ENST00000409871.1|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6 	ENST00000343936.4|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6
hg19_v2_chr2_+_46926048_46926095	0.0910522	UACAGUA	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr12_+_56401268_56401443	0.0906636	UACAGUA	ENST00000262032.5|IKZF4|ENSG00000123411.10|IKAROS family zinc finger 4 (Eos)
hg19_v2_chr3_+_150126101_150126122	0.0899077	UACAGUA	ENST00000361875.3|TSC22D2|ENSG00000196428.8|TSC22 domain family, member 2 	ENST00000361136.2|TSC22D2|ENSG00000196428.8|TSC22 domain family, member 2
hg19_v2_chr8_+_79578282_79578334	0.0898842	UACAGUA	ENST00000263849.4|ZC2HC1A|ENSG00000104427.7|zinc finger, C2HC-type containing 1A
hg19_v2_chr12_+_19592602_19592648	0.0898249	UACAGUA	ENST00000398864.3|AEBP2|ENSG00000139154.10|AE binding protein 2 	ENST00000266508.9|AEBP2|ENSG00000139154.10|AE binding protein 2
hg19_v2_chr8_+_26149007_26149061	0.0892573	UACAGUA	ENST00000380737.3|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000524169.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chr17_-_49198216_49198236	0.0888549	UACAGUA	ENST00000262013.7|SPAG9|ENSG00000008294.16|sperm associated antigen 9 	ENST00000357122.4|SPAG9|ENSG00000008294.16|sperm associated antigen 9
hg19_v2_chr5_+_141488070_141488094	0.0882271	UACAGUA	ENST00000253814.4|NDFIP1|ENSG00000131507.9|Nedd4 family interacting protein 1
hg19_v2_chr2_+_178257372_178257523	0.0879071	UACAGUA	ENST00000264167.4|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase 	ENST00000409888.1|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase
hg19_v2_chr5_+_74632993_74633028	0.0878559	UACAGUA	ENST00000287936.4|HMGCR|ENSG00000113161.11|3-hydroxy-3-methylglutaryl-CoA reductase
hg19_v2_chr4_-_40631859_40631889	0.087834	UACAGUA	ENST00000295971.7|RBM47|ENSG00000163694.10|RNA binding motif protein 47 	ENST00000319592.4|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr9_+_4985228_4985245	0.0878301	UACAGUA	ENST00000381652.3|JAK2|ENSG00000096968.8|Janus kinase 2
hg19_v2_chr20_-_14318248_14318264	0.0877094	UACAGUA	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr7_+_116502527_116502558	0.0874754	UACAGUA	ENST00000361183.3|CAPZA2|ENSG00000198898.8|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v2_chr4_+_15004165_15004298	0.0873165	UACAGUA	ENST00000538197.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000541112.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000442003.2|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2
hg19_v2_chr5_+_115177178_115177178	0.0870126	UACAGUA	ENST00000316788.7|AP3S1|ENSG00000177879.10|adaptor-related protein complex 3, sigma 1 subunit
hg19_v2_chr1_+_78245303_78245351	0.0868781	UACAGUA	ENST00000370791.3|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A 	ENST00000443751.2|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A
hg19_v2_chr1_+_155829286_155829340	0.0848954	UACAGUA	ENST00000368324.4|SYT11|ENSG00000132718.7|synaptotagmin XI
hg19_v2_chr3_-_141944398_141944465	0.0846906	UACAGUA	ENST00000544571.1|GK5|ENSG00000175066.11|glycerol kinase 5 (putative) 	ENST00000392993.2|GK5|ENSG00000175066.11|glycerol kinase 5 (putative)
hg19_v2_chr18_-_29522989_29523104	0.0839369	UACAGUA	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr11_+_9406169_9406210	0.0839348	UACAGUA	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr8_+_22224811_22224822	0.0833492	UACAGUA	ENST00000381237.1|SLC39A14|ENSG00000104635.9|solute carrier family 39 (zinc transporter), member 14
hg19_v2_chr1_+_113933581_113933611	0.0829523	UACAGUA	ENST00000307546.9|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369615.1|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369611.4|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3
hg19_v2_chr1_-_10003372_10003465	0.0827141	UACAGUA	ENST00000377223.1|LZIC|ENSG00000162441.7|leucine zipper and CTNNBIP1 domain containing 	ENST00000541052.1|LZIC|ENSG00000162441.7|leucine zipper and CTNNBIP1 domain containing 	ENST00000377213.1|LZIC|ENSG00000162441.7|leucine zipper and CTNNBIP1 domain containing
hg19_v2_chr2_-_183903133_183903210	0.0826728	UACAGUA	ENST00000361354.4|NCKAP1|ENSG00000061676.10|NCK-associated protein 1
hg19_v2_chr3_+_130569429_130569479	0.0820675	UACAGUA	ENST00000505330.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000504381.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000507488.2|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000393221.4|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chrX_-_119694538_119694555	0.081574	UACAGUA	ENST00000371322.5|CUL4B|ENSG00000158290.12|cullin 4B
hg19_v2_chr1_-_20812690_20812763	0.0813933	UACAGUA	ENST00000375078.3|CAMK2N1|ENSG00000162545.5|calcium/calmodulin-dependent protein kinase II inhibitor 1
hg19_v2_chr3_-_56835967_56835995	0.0810364	UACAGUA	ENST00000495373.1|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3 	ENST00000296315.3|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3
hg19_v2_chr17_-_65241281_65241326	0.0805172	UACAGUA	ENST00000358691.5|HELZ|ENSG00000198265.7|helicase with zinc finger 	ENST00000580168.1|HELZ|ENSG00000198265.7|helicase with zinc finger
hg19_v2_chr20_-_5591626_5591677	0.0799913	UACAGUA	ENST00000379019.4|GPCPD1|ENSG00000125772.8|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg19_v2_chr5_+_112043186_112043225	0.0797906	UACAGUA	ENST00000509732.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000457016.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000507379.1|APC|ENSG00000134982.12|adenomatous polyposis coli
hg19_v2_chr4_+_37892682_37892757	0.0793523	UACAGUA	ENST00000508802.1|TBC1D1|ENSG00000065882.11|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 	ENST00000261439.4|TBC1D1|ENSG00000065882.11|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 	ENST00000402522.1|TBC1D1|ENSG00000065882.11|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
hg19_v2_chr20_-_57617831_57617964	0.0791313	UACAGUA	ENST00000371033.5|SLMO2|ENSG00000101166.11|slowmo homolog 2 (Drosophila) 	ENST00000355937.4|SLMO2|ENSG00000101166.11|slowmo homolog 2 (Drosophila)
hg19_v2_chr1_-_220445757_220445819	0.0786597	UACAGUA	ENST00000358951.2|RAB3GAP2|ENSG00000118873.11|RAB3 GTPase activating protein subunit 2 (non-catalytic)
hg19_v2_chr15_-_83316254_83316368	0.0777619	UACAGUA	ENST00000567678.1|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1 	ENST00000450751.2|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1
hg19_v2_chr5_+_96271141_96271168	0.0773769	UACAGUA	ENST00000231368.5|LNPEP|ENSG00000113441.11|leucyl/cystinyl aminopeptidase
hg19_v2_chrX_-_131352152_131352204	0.0761535	UACAGUA	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr5_+_138940742_138940769	0.075936	UACAGUA	ENST00000398733.3|UBE2D2|ENSG00000131508.11|ubiquitin-conjugating enzyme E2D 2 	ENST00000253815.2|UBE2D2|ENSG00000131508.11|ubiquitin-conjugating enzyme E2D 2 	ENST00000505007.1|UBE2D2|ENSG00000131508.11|ubiquitin-conjugating enzyme E2D 2
hg19_v2_chr7_-_107204337_107204485	0.0755744	UACAGUA	ENST00000605888.1|COG5|ENSG00000164597.9|component of oligomeric golgi complex 5 	ENST00000347053.3|COG5|ENSG00000164597.9|component of oligomeric golgi complex 5
hg19_v2_chr18_-_19180681_19180711	0.0753388	UACAGUA	ENST00000269214.5|ESCO1|ENSG00000141446.6|establishment of sister chromatid cohesion N-acetyltransferase 1
hg19_v2_chr5_-_40798263_40798300	0.0752575	UACAGUA	ENST00000296800.4|PRKAA1|ENSG00000132356.7|protein kinase, AMP-activated, alpha 1 catalytic subunit 	ENST00000397128.2|PRKAA1|ENSG00000132356.7|protein kinase, AMP-activated, alpha 1 catalytic subunit
hg19_v2_chr3_-_15901278_15901354	0.0750172	UACAGUA	ENST00000399451.2|ANKRD28|ENSG00000206560.6|ankyrin repeat domain 28
hg19_v2_chr1_-_26232951_26232959	0.0740857	UACAGUA	ENST00000426559.2|STMN1|ENSG00000117632.16|stathmin 1 	ENST00000455785.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr10_+_63661053_63661079	0.0740737	UACAGUA	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr13_+_113622810_113622830	0.0739468	UACAGUA	ENST00000397030.1|MCF2L|ENSG00000126217.16|MCF.2 cell line derived transforming sequence-like
hg19_v2_chr15_-_68498376_68498417	0.0739196	UACAGUA	ENST00000540479.1|CALML4|ENSG00000129007.10|calmodulin-like 4 	ENST00000395465.3|CALML4|ENSG00000129007.10|calmodulin-like 4
hg19_v2_chr4_-_23891693_23891706	0.0733988	UACAGUA	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr3_+_88188254_88188254	0.0733916	UACAGUA	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr6_+_33387868_33387941	0.0730738	UACAGUA	ENST00000418600.2|SYNGAP1|ENSG00000197283.8|synaptic Ras GTPase activating protein 1
hg19_v2_chr2_-_180129484_180129574	0.0723716	UACAGUA	ENST00000428443.3|SESTD1|ENSG00000187231.9|SEC14 and spectrin domains 1
hg19_v2_chr15_+_80987617_80987720	0.071622	UACAGUA	ENST00000258884.4|ABHD17C|ENSG00000136379.7|abhydrolase domain containing 17C 	ENST00000558464.1|ABHD17C|ENSG00000136379.7|abhydrolase domain containing 17C
hg19_v2_chr9_-_74525658_74525658	0.0715339	UACAGUA	ENST00000333421.6|ABHD17B|ENSG00000107362.9|abhydrolase domain containing 17B
hg19_v2_chr3_+_120461484_120461600	0.0714968	UACAGUA	ENST00000484715.1|GTF2E1|ENSG00000153767.5|general transcription factor IIE, polypeptide 1, alpha 56kDa 	ENST00000469772.1|GTF2E1|ENSG00000153767.5|general transcription factor IIE, polypeptide 1, alpha 56kDa 	ENST00000283875.5|GTF2E1|ENSG00000153767.5|general transcription factor IIE, polypeptide 1, alpha 56kDa 	ENST00000492959.1|GTF2E1|ENSG00000153767.5|general transcription factor IIE, polypeptide 1, alpha 56kDa
hg19_v2_chr12_-_111021110_111021142	0.0714818	UACAGUA	ENST00000354300.3|PPTC7|ENSG00000196850.4|PTC7 protein phosphatase homolog (S. cerevisiae)
hg19_v2_chrX_+_100663243_100663283	0.0700125	UACAGUA	ENST00000316594.5|HNRNPH2|ENSG00000126945.8|heterogeneous nuclear ribonucleoprotein H2 (H')
hg19_v2_chr6_+_107811162_107811196	0.0696707	UACAGUA	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chr10_+_115614370_115614436	0.0695781	UACAGUA	ENST00000369301.3|NHLRC2|ENSG00000196865.4|NHL repeat containing 2
hg19_v2_chr20_+_58508817_58508867	0.0694443	UACAGUA	ENST00000358293.3|FAM217B|ENSG00000196227.6|family with sequence similarity 217, member B
hg19_v2_chr12_+_69004619_69004699	0.0688972	UACAGUA	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chrX_-_128657457_128657477	0.0688845	UACAGUA	ENST00000371121.3|SMARCA1|ENSG00000102038.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 	ENST00000371123.1|SMARCA1|ENSG00000102038.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 	ENST00000371122.4|SMARCA1|ENSG00000102038.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
hg19_v2_chr3_+_69812877_69812962	0.0686229	UACAGUA	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr14_+_57857262_57857334	0.0685914	UACAGUA	ENST00000555166.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000556492.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000554703.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg19_v2_chr12_-_57824739_57824834	0.0678352	UACAGUA	ENST00000347140.3|R3HDM2|ENSG00000179912.15|R3H domain containing 2 	ENST00000402412.1|R3HDM2|ENSG00000179912.15|R3H domain containing 2
hg19_v2_chr21_+_30671189_30671207	0.0677067	UACAGUA	ENST00000286800.3|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr11_+_9685604_9685706	0.0676745	UACAGUA	ENST00000447399.2|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit 	ENST00000318950.6|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit
hg19_v2_chr5_+_77656339_77656362	0.0676275	UACAGUA	ENST00000538629.1|SCAMP1|ENSG00000085365.13|secretory carrier membrane protein 1
hg19_v2_chr22_-_37823468_37823528	0.0673879	UACAGUA	ENST00000402918.2|ELFN2|ENSG00000166897.10|extracellular leucine-rich repeat and fibronectin type III domain containing 2
hg19_v2_chr6_-_86352642_86352709	0.0668326	UACAGUA	ENST00000355238.6|SYNCRIP|ENSG00000135316.13|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v2_chr4_-_125633876_125633897	0.0662957	UACAGUA	ENST00000504087.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50 	ENST00000515641.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50
hg19_v2_chr1_-_68299130_68299160	0.0652451	UACAGUA	ENST00000370982.3|GNG12|ENSG00000172380.5|guanine nucleotide binding protein (G protein), gamma 12
hg19_v2_chr18_-_21977748_21977823	0.0649383	UACAGUA	ENST00000399441.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A 	ENST00000319481.3|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr10_-_115904361_115904375	0.0646151	UACAGUA	ENST00000428953.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118 	ENST00000543782.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118
hg19_v2_chr2_-_42180940_42180951	0.0642263	UACAGUA	ENST00000378711.2|C2orf91|ENSG00000205086.5|chromosome 2 open reading frame 91
hg19_v2_chr14_+_75745477_75745680	0.0641397	UACAGUA	ENST00000303562.4|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000554617.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000554212.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000535987.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000555242.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog
hg19_v2_chr2_-_37193606_37193633	0.063529	UACAGUA	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr1_+_193028552_193028589	0.0632407	UACAGUA	ENST00000400968.2|TROVE2|ENSG00000116747.8|TROVE domain family, member 2 	ENST00000432079.1|TROVE2|ENSG00000116747.8|TROVE domain family, member 2
hg19_v2_chr10_+_76586348_76586400	0.0628495	UACAGUA	ENST00000372724.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000287239.4|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000372714.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B
hg19_v2_chr10_+_94352956_94353043	0.0628003	UACAGUA	ENST00000260731.3|KIF11|ENSG00000138160.4|kinesin family member 11
hg19_v2_chr6_+_89790490_89790506	0.0626439	UACAGUA	ENST00000336032.3|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr16_+_53468332_53468414	0.0625155	UACAGUA	ENST00000262133.6|RBL2|ENSG00000103479.10|retinoblastoma-like 2 (p130)
hg19_v2_chr2_-_71221942_71222075	0.0624133	UACAGUA	ENST00000272438.4|TEX261|ENSG00000144043.7|testis expressed 261
hg19_v2_chr10_-_3827417_3827473	0.0623763	UACAGUA	ENST00000497571.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6 	ENST00000542957.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6
hg19_v2_chr3_+_113465866_113465925	0.0620541	UACAGUA	ENST00000273398.3|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000538620.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000496747.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000475322.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
hg19_v2_chr2_+_71558858_71558936	0.0617388	UACAGUA	ENST00000437658.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000355812.3|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000377802.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000264447.4|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000409544.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000455226.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454278.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000417778.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454122.1|ZNF638|ENSG00000075292.14|zinc finger protein 638
hg19_v2_chr2_-_179343268_179343338	0.0615091	UACAGUA	ENST00000424785.2|FKBP7|ENSG00000079150.13|FK506 binding protein 7
hg19_v2_chr3_+_38495333_38495422	0.0613615	UACAGUA	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr8_-_92053212_92053292	0.061085	UACAGUA	ENST00000285419.3|TMEM55A|ENSG00000155099.3|transmembrane protein 55A
hg19_v2_chr10_+_60272814_60272900	0.0607753	UACAGUA	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr5_+_137688285_137688429	0.0606756	UACAGUA	ENST00000314358.5|KDM3B|ENSG00000120733.9|lysine (K)-specific demethylase 3B
hg19_v2_chr5_+_139027877_139027918	0.0604922	UACAGUA	ENST00000302517.3|CXXC5|ENSG00000171604.7|CXXC finger protein 5
hg19_v2_chr1_+_100435315_100435345	0.0602658	UACAGUA	ENST00000370155.3|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 	ENST00000465289.1|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
hg19_v2_chr2_+_160568978_160569064	0.0602029	UACAGUA	ENST00000409175.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000539065.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000259050.4|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000421037.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
hg19_v2_chr7_-_44924939_44924993	0.0600366	UACAGUA	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr12_-_90049828_90049847	0.0598292	UACAGUA	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr13_-_50367057_50367142	0.0590965	UACAGUA	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr6_-_62996066_62996137	0.0590687	UACAGUA	ENST00000281156.4|KHDRBS2|ENSG00000112232.8|KH domain containing, RNA binding, signal transduction associated 2
hg19_v2_chr4_+_26585538_26585680	0.0587634	UACAGUA	ENST00000264866.4|TBC1D19|ENSG00000109680.6|TBC1 domain family, member 19
hg19_v2_chr9_+_101867359_101867376	0.0579635	UACAGUA	ENST00000374994.4|TGFBR1|ENSG00000106799.8|transforming growth factor, beta receptor 1
hg19_v2_chr15_-_35280426_35280503	0.0578976	UACAGUA	ENST00000559564.1|ZNF770|ENSG00000198146.4|zinc finger protein 770 	ENST00000356321.4|ZNF770|ENSG00000198146.4|zinc finger protein 770
hg19_v2_chr5_-_172198190_172198206	0.0578532	UACAGUA	ENST00000239223.3|DUSP1|ENSG00000120129.5|dual specificity phosphatase 1
hg19_v2_chr5_-_59189545_59189625	0.0575687	UACAGUA	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr2_-_37899323_37899374	0.0572255	UACAGUA	ENST00000295324.3|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3 	ENST00000457889.1|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3
hg19_v2_chr4_+_144106080_144106144	0.0569541	UACAGUA	ENST00000307017.4|USP38|ENSG00000170185.5|ubiquitin specific peptidase 38
hg19_v2_chr1_+_82266053_82266082	0.0565113	UACAGUA	ENST00000370715.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370713.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000319517.6|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370717.2|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000394879.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000271029.4|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000335786.5|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr7_+_116139424_116139444	0.0563038	UACAGUA	ENST00000222693.4|CAV2|ENSG00000105971.10|caveolin 2
hg19_v2_chr9_+_37800758_37800822	0.0557406	UACAGUA	ENST00000242323.7|DCAF10|ENSG00000122741.11|DDB1 and CUL4 associated factor 10
hg19_v2_chr3_-_119813264_119813272	0.0556543	UACAGUA	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr4_-_68566832_68566897	0.0549564	UACAGUA	ENST00000420827.2|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6 	ENST00000322244.5|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6
hg19_v2_chr2_-_70475730_70475798	0.054893	UACAGUA	ENST00000445587.1|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000433529.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000415783.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr13_+_20532807_20532841	0.0548633	UACAGUA	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr17_+_54671047_54671075	0.0547481	UACAGUA	ENST00000332822.4|NOG|ENSG00000183691.4|noggin
hg19_v2_chr14_+_45431379_45431465	0.054689	UACAGUA	ENST00000361577.3|FAM179B|ENSG00000198718.8|family with sequence similarity 179, member B 	ENST00000361462.2|FAM179B|ENSG00000198718.8|family with sequence similarity 179, member B 	ENST00000382233.2|FAM179B|ENSG00000198718.8|family with sequence similarity 179, member B
hg19_v2_chr4_-_36246060_36246167	0.0544408	UACAGUA	ENST00000303965.4|ARAP2|ENSG00000047365.7|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
hg19_v2_chr12_+_14518598_14518663	0.0540934	UACAGUA	ENST00000261168.4|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000538511.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000545723.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000543189.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536444.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr1_+_183605200_183605220	0.053862	UACAGUA	ENST00000304685.4|RGL1|ENSG00000143344.11|ral guanine nucleotide dissociation stimulator-like 1
hg19_v2_chr5_-_127873659_127873735	0.0537139	UACAGUA	ENST00000262464.4|FBN2|ENSG00000138829.6|fibrillin 2
hg19_v2_chr13_-_77601282_77601308	0.053212	UACAGUA	ENST00000355619.5|FBXL3|ENSG00000005812.6|F-box and leucine-rich repeat protein 3
hg19_v2_chr9_-_99180597_99180614	0.0526422	UACAGUA	ENST00000375256.4|ZNF367|ENSG00000165244.6|zinc finger protein 367
hg19_v2_chr17_+_7608511_7608538	0.0517556	UACAGUA	ENST00000226091.2|EFNB3|ENSG00000108947.4|ephrin-B3
hg19_v2_chr1_+_203764742_203764834	0.0510386	UACAGUA	ENST00000432282.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000453771.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000367214.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000367212.3|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000332127.4|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A
hg19_v2_chr15_+_89631381_89631391	0.0504061	UACAGUA	ENST00000352732.5|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr1_+_20208870_20209006	0.050256	UACAGUA	ENST00000375120.3|OTUD3|ENSG00000169914.5|OTU domain containing 3
hg19_v2_chr11_+_12695944_12695989	0.0500273	UACAGUA	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr12_-_15114603_15114631	0.0496292	UACAGUA	ENST00000228945.4|ARHGDIB|ENSG00000111348.4|Rho GDP dissociation inhibitor (GDI) beta
hg19_v2_chr8_+_67579807_67579887	0.0495781	UACAGUA	ENST00000519289.1|C8orf44-SGK3|ENSG00000270024.1|C8orf44-SGK3 readthrough 	ENST00000519561.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44 	ENST00000521889.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44
hg19_v2_chr7_-_79082867_79082900	0.0493674	UACAGUA	ENST00000419488.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2 	ENST00000354212.4|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr6_+_168227611_168227813	0.0492353	UACAGUA	ENST00000344191.4|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000351017.4|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000392108.3|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000366806.2|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000392112.1|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000400824.4|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000447894.2|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000400822.3|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4
hg19_v2_chr15_+_68570062_68570147	0.0492095	UACAGUA	ENST00000306917.4|FEM1B|ENSG00000169018.5|fem-1 homolog b (C. elegans)
hg19_v2_chr6_-_8064567_8064652	0.049118	UACAGUA	ENST00000543936.1|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted 	ENST00000397457.2|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted
hg19_v2_chr6_+_143929307_143929322	0.0487827	UACAGUA	ENST00000427704.2|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2 	ENST00000305766.6|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2
hg19_v2_chr9_+_2015335_2015374	0.0475254	UACAGUA	ENST00000349721.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000357248.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000450198.1|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
hg19_v2_chr1_+_32573636_32573673	0.0472126	UACAGUA	ENST00000373625.3|KPNA6|ENSG00000025800.9|karyopherin alpha 6 (importin alpha 7)
hg19_v2_chr3_-_13009168_13009236	0.0464366	UACAGUA	ENST00000273221.4|IQSEC1|ENSG00000144711.9|IQ motif and Sec7 domain 1
hg19_v2_chr15_-_101792137_101792159	0.0463545	UACAGUA	ENST00000254190.3|CHSY1|ENSG00000131873.5|chondroitin sulfate synthase 1
hg19_v2_chr4_-_105416039_105416065	0.0457797	UACAGUA	ENST00000394767.2|CXXC4|ENSG00000168772.9|CXXC finger protein 4
hg19_v2_chr1_+_162467595_162467655	0.0454283	UACAGUA	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr1_-_85156216_85156240	0.0453727	UACAGUA	ENST00000342203.3|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein 	ENST00000370612.4|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein
hg19_v2_chr2_-_172017343_172017391	0.0453359	UACAGUA	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr18_-_51751132_51751158	0.04533	UACAGUA	ENST00000256429.3|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr17_-_63557759_63557774	0.0449771	UACAGUA	ENST00000307078.5|AXIN2|ENSG00000168646.8|axin 2
hg19_v2_chr12_+_62860581_62860629	0.0446322	UACAGUA	ENST00000393632.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393630.3|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000280379.6|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000546600.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552738.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393629.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552115.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae)
hg19_v2_chr17_-_38821373_38821440	0.0445961	UACAGUA	ENST00000394052.3|KRT222|ENSG00000213424.4|keratin 222
hg19_v2_chr9_+_4490394_4490446	0.0444399	UACAGUA	ENST00000262352.3|SLC1A1|ENSG00000106688.7|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v2_chr2_-_114036488_114036527	0.0444043	UACAGUA	ENST00000263335.7|PAX8|ENSG00000125618.12|paired box 8 	ENST00000397647.3|PAX8|ENSG00000125618.12|paired box 8 	ENST00000348715.5|PAX8|ENSG00000125618.12|paired box 8 	ENST00000429538.3|PAX8|ENSG00000125618.12|paired box 8
hg19_v2_chr7_-_105752651_105752777	0.0440998	UACAGUA	ENST00000470347.1|SYPL1|ENSG00000008282.3|synaptophysin-like 1 	ENST00000455385.2|SYPL1|ENSG00000008282.3|synaptophysin-like 1
hg19_v2_chr13_+_46039037_46039126	0.0440272	UACAGUA	ENST00000349995.5|COG3|ENSG00000136152.10|component of oligomeric golgi complex 3
hg19_v2_chr20_+_32951041_32951067	0.0437848	UACAGUA	ENST00000374864.4|ITCH|ENSG00000078747.8|itchy E3 ubiquitin protein ligase
hg19_v2_chr1_-_217804377_217804446	0.0435026	UACAGUA	ENST00000366935.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2 	ENST00000366934.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2
hg19_v2_chr8_-_17104356_17104395	0.043477	UACAGUA	ENST00000361272.4|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7 	ENST00000523917.1|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7
hg19_v2_chr6_+_71998506_71998522	0.0433794	UACAGUA	ENST00000370435.4|OGFRL1|ENSG00000119900.7|opioid growth factor receptor-like 1
hg19_v2_chr15_-_51914996_51915035	0.0431094	UACAGUA	ENST00000251076.5|DMXL2|ENSG00000104093.9|Dmx-like 2
hg19_v2_chr3_+_50712672_50712703	0.0429687	UACAGUA	ENST00000266037.9|DOCK3|ENSG00000088538.12|dedicator of cytokinesis 3
hg19_v2_chrX_+_146993449_146993498	0.042819	UACAGUA	ENST00000218200.8|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370471.3|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370477.1|FMR1|ENSG00000102081.9|fragile X mental retardation 1
hg19_v2_chr4_+_128554081_128554121	0.0405442	UACAGUA	ENST00000335251.6|INTU|ENSG00000164066.8|inturned planar cell polarity protein 	ENST00000296461.5|INTU|ENSG00000164066.8|inturned planar cell polarity protein
hg19_v2_chr16_-_47177874_47177922	0.0403594	UACAGUA	ENST00000562435.1|NETO2|ENSG00000171208.5|neuropilin (NRP) and tolloid (TLL)-like 2
hg19_v2_chr3_+_188889737_188889767	0.0402421	UACAGUA	ENST00000345063.3|TPRG1|ENSG00000188001.5|tumor protein p63 regulated 1
hg19_v2_chr1_+_112162381_112162431	0.0397074	UACAGUA	ENST00000433097.1|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000369709.3|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000436150.2|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family
hg19_v2_chr22_-_22221900_22221970	0.0395803	UACAGUA	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chrX_-_154493791_154493874	0.0395179	UACAGUA	ENST00000369454.3|RAB39B|ENSG00000155961.4|RAB39B, member RAS oncogene family
hg19_v2_chr9_-_98279241_98279339	0.0386328	UACAGUA	ENST00000437951.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000375274.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000430669.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000468211.2|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chrX_-_109561294_109561467	0.0383481	UACAGUA	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr15_-_65809581_65809617	0.0379347	UACAGUA	ENST00000341861.5|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8
hg19_v2_chr1_-_84464780_84464862	0.0377519	UACAGUA	ENST00000260505.8|TTLL7|ENSG00000137941.12|tubulin tyrosine ligase-like family, member 7
hg19_v2_chr1_+_110091189_110091268	0.0376954	UACAGUA	ENST00000369851.4|GNAI3|ENSG00000065135.7|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
hg19_v2_chr21_+_44394620_44394737	0.0372284	UACAGUA	ENST00000291547.5|PKNOX1|ENSG00000160199.10|PBX/knotted 1 homeobox 1
hg19_v2_chr1_+_43124087_43124183	0.0372043	UACAGUA	ENST00000304979.3|PPIH|ENSG00000171960.6|peptidylprolyl isomerase H (cyclophilin H) 	ENST00000372550.1|PPIH|ENSG00000171960.6|peptidylprolyl isomerase H (cyclophilin H) 	ENST00000440068.1|PPIH|ENSG00000171960.6|peptidylprolyl isomerase H (cyclophilin H)
hg19_v2_chr9_-_123964114_123964210	0.0368952	UACAGUA	ENST00000373840.4|RAB14|ENSG00000119396.6|RAB14, member RAS oncogene family
hg19_v2_chr8_+_133787586_133787673	0.0366434	UACAGUA	ENST00000395379.1|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000395386.2|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000337920.4|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1
hg19_v2_chr10_-_735553_735683	0.0364577	UACAGUA	ENST00000280886.6|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila) 	ENST00000423550.1|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v2_chr12_-_111126910_111126962	0.0359052	UACAGUA	ENST00000242607.8|HVCN1|ENSG00000122986.9|hydrogen voltage-gated channel 1
hg19_v2_chr2_+_120517174_120517207	0.0358461	UACAGUA	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr10_-_94333784_94333860	0.0358338	UACAGUA	ENST00000265986.6|IDE|ENSG00000119912.11|insulin-degrading enzyme
hg19_v2_chr1_+_51701924_51702001	0.0356961	UACAGUA	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chr1_+_67390578_67390698	0.035519	UACAGUA	ENST00000371018.3|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000355977.6|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000357692.2|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000401041.1|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000371016.1|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000371014.1|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000371012.2|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator
hg19_v2_chr9_-_115095883_115095947	0.0354241	UACAGUA	ENST00000450374.1|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000374255.2|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000334318.6|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000374257.1|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3
hg19_v2_chr2_-_122042770_122042785	0.0346057	UACAGUA	ENST00000263707.5|TFCP2L1|ENSG00000115112.7|transcription factor CP2-like 1
hg19_v2_chrX_+_133507327_133507386	0.0345862	UACAGUA	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chr11_-_86666427_86666450	0.0342889	UACAGUA	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr20_-_40247133_40247194	0.033985	UACAGUA	ENST00000373233.3|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6 	ENST00000309279.7|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6
hg19_v2_chr2_+_148778570_148778589	0.033631	UACAGUA	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr6_+_17600576_17600642	0.0335025	UACAGUA	ENST00000259963.3|FAM8A1|ENSG00000137414.5|family with sequence similarity 8, member A1
hg19_v2_chr2_+_204192942_204193038	0.0334733	UACAGUA	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chrX_-_30885319_30885319	0.0334048	UACAGUA	ENST00000378933.1|TAB3|ENSG00000157625.11|TGF-beta activated kinase 1/MAP3K7 binding protein 3
hg19_v2_chr18_+_76829385_76829438	0.033398	UACAGUA	ENST00000426216.2|ATP9B|ENSG00000166377.15|ATPase, class II, type 9B 	ENST00000307671.7|ATP9B|ENSG00000166377.15|ATPase, class II, type 9B 	ENST00000586672.1|ATP9B|ENSG00000166377.15|ATPase, class II, type 9B 	ENST00000586722.1|ATP9B|ENSG00000166377.15|ATPase, class II, type 9B
hg19_v2_chr6_+_35995488_35995528	0.0331307	UACAGUA	ENST00000229795.3|MAPK14|ENSG00000112062.6|mitogen-activated protein kinase 14
hg19_v2_chr1_+_179923873_179923954	0.0330452	UACAGUA	ENST00000367607.3|CEP350|ENSG00000135837.11|centrosomal protein 350kDa 	ENST00000491495.2|CEP350|ENSG00000135837.11|centrosomal protein 350kDa
hg19_v2_chr5_-_133512683_133512729	0.0329785	UACAGUA	ENST00000353411.6|SKP1|ENSG00000113558.14|S-phase kinase-associated protein 1
hg19_v2_chr17_+_29718642_29718656	0.0327567	UACAGUA	ENST00000325874.8|RAB11FIP4|ENSG00000131242.11|RAB11 family interacting protein 4 (class II)
hg19_v2_chr20_+_19867150_19867175	0.0323477	UACAGUA	ENST00000255006.6|RIN2|ENSG00000132669.8|Ras and Rab interactor 2
hg19_v2_chr4_+_144257915_144258009	0.0317767	UACAGUA	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr8_-_38239732_38239796	0.0317003	UACAGUA	ENST00000534155.1|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000433384.2|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000317025.8|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000316985.3|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1
hg19_v2_chr1_+_12290121_12290141	0.0314476	UACAGUA	ENST00000358136.3|VPS13D|ENSG00000048707.9|vacuolar protein sorting 13 homolog D (S. cerevisiae) 	ENST00000356315.4|VPS13D|ENSG00000048707.9|vacuolar protein sorting 13 homolog D (S. cerevisiae)
hg19_v2_chr7_-_112579869_112579971	0.0307069	UACAGUA	ENST00000297145.4|C7orf60|ENSG00000164603.7|chromosome 7 open reading frame 60
hg19_v2_chr12_+_119419294_119419308	0.0304402	UACAGUA	ENST00000267260.4|SRRM4|ENSG00000139767.4|serine/arginine repetitive matrix 4
hg19_v2_chr6_+_163835669_163835693	0.0304033	UACAGUA	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chrX_-_122866874_122866911	0.0301503	UACAGUA	ENST00000245838.8|THOC2|ENSG00000125676.15|THO complex 2 	ENST00000355725.4|THOC2|ENSG00000125676.15|THO complex 2
hg19_v2_chr1_+_25071848_25071944	0.0301263	UACAGUA	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chr12_-_42877764_42877803	0.0297348	UACAGUA	ENST00000455697.1|PRICKLE1|ENSG00000139174.6|prickle homolog 1 (Drosophila)
hg19_v2_chr9_+_22446814_22446840	0.0294647	UACAGUA	ENST00000325870.2|DMRTA1|ENSG00000176399.3|DMRT-like family A1
hg19_v2_chr16_-_4323015_4323076	0.0294071	UACAGUA	ENST00000204517.6|TFAP4|ENSG00000090447.7|transcription factor AP-4 (activating enhancer binding protein 4)
hg19_v2_chr12_+_67663056_67663067	0.0293014	UACAGUA	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr10_+_24755416_24755470	0.0285965	UACAGUA	ENST00000396446.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000396445.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000376451.2|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr1_-_35395178_35395265	0.0283255	UACAGUA	ENST00000373347.1|DLGAP3|ENSG00000116544.7|discs, large (Drosophila) homolog-associated protein 3
hg19_v2_chrX_-_19988382_19988416	0.0281362	UACAGUA	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr3_+_23847394_23847423	0.0280431	UACAGUA	ENST00000306627.3|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr22_-_28315115_28315260	0.0275984	UACAGUA	ENST00000455418.3|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000436663.1|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000320996.10|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000335272.5|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta
hg19_v2_chr4_-_54930790_54930857	0.0275011	UACAGUA	ENST00000263921.3|CHIC2|ENSG00000109220.6|cysteine-rich hydrophobic domain 2
hg19_v2_chr12_+_27396901_27397108	0.0272217	UACAGUA	ENST00000541191.1|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like 	ENST00000389032.3|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like
hg19_v2_chr2_+_182756615_182756698	0.0267654	UACAGUA	ENST00000431877.2|SSFA2|ENSG00000138434.12|sperm specific antigen 2 	ENST00000320370.7|SSFA2|ENSG00000138434.12|sperm specific antigen 2
hg19_v2_chr5_+_142149955_142150000	0.0262619	UACAGUA	ENST00000378004.3|ARHGAP26|ENSG00000145819.11|Rho GTPase activating protein 26
hg19_v2_chr16_+_475599_475672	0.0261266	UACAGUA	ENST00000262305.4|RAB11FIP3|ENSG00000090565.11|RAB11 family interacting protein 3 (class II) 	ENST00000457159.1|RAB11FIP3|ENSG00000090565.11|RAB11 family interacting protein 3 (class II)
hg19_v2_chr15_-_30114622_30114706	0.0251108	UACAGUA	ENST00000495972.2|TJP1|ENSG00000104067.12|tight junction protein 1 	ENST00000346128.6|TJP1|ENSG00000104067.12|tight junction protein 1
hg19_v2_chr4_+_123747834_123747863	0.0249025	UACAGUA	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr1_-_94374946_94374994	0.0247982	UACAGUA	ENST00000370238.3|GCLM|ENSG00000023909.5|glutamate-cysteine ligase, modifier subunit
hg19_v2_chr9_-_37465396_37465454	0.0247917	UACAGUA	ENST00000307750.4|ZBTB5|ENSG00000168795.4|zinc finger and BTB domain containing 5
hg19_v2_chr19_+_10527449_10527619	0.0245999	UACAGUA	ENST00000592685.1|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific 	ENST00000380702.2|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr10_-_79686284_79686527	0.0242598	UACAGUA	ENST00000372391.2|DLG5|ENSG00000151208.12|discs, large homolog 5 (Drosophila) 	ENST00000372388.2|DLG5|ENSG00000151208.12|discs, large homolog 5 (Drosophila)
hg19_v2_chr8_-_42698433_42698486	0.0239062	UACAGUA	ENST00000345117.2|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1 	ENST00000254250.3|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1
hg19_v2_chr3_-_52713729_52713784	0.0238155	UACAGUA	ENST00000296302.7|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000356770.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000337303.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409057.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000410007.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409114.3|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409767.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000423351.1|PBRM1|ENSG00000163939.14|polybromo 1
hg19_v2_chr4_+_48343339_48343414	0.0237835	UACAGUA	ENST00000264313.6|SLAIN2|ENSG00000109171.10|SLAIN motif family, member 2
hg19_v2_chr7_-_120498357_120498456	0.0234764	UACAGUA	ENST00000415871.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000222747.3|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000430985.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chrX_-_40594755_40594809	0.0234276	UACAGUA	ENST00000324817.1|MED14|ENSG00000180182.6|mediator complex subunit 14
hg19_v2_chr15_+_85923856_85923987	0.0221608	UACAGUA	ENST00000560302.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000394518.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000361243.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000560256.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr4_+_177241094_177241173	0.0219022	UACAGUA	ENST00000503362.1|SPCS3|ENSG00000129128.8|signal peptidase complex subunit 3 homolog (S. cerevisiae)
hg19_v2_chr3_-_187388173_187388189	0.0217837	UACAGUA	ENST00000287641.3|SST|ENSG00000157005.3|somatostatin
hg19_v2_chr8_+_98656336_98656535	0.0214241	UACAGUA	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr15_+_59063478_59063561	0.0213957	UACAGUA	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr2_-_216300784_216300895	0.021081	UACAGUA	ENST00000421182.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000432072.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000323926.6|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000336916.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357867.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000359671.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000346544.3|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000345488.5|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357009.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000446046.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000356005.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000443816.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000426059.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000354785.4|FN1|ENSG00000115414.14|fibronectin 1
hg19_v2_chr10_+_31608054_31608156	0.0210053	UACAGUA	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr14_+_96000930_96001053	0.0207773	UACAGUA	ENST00000331334.4|GLRX5|ENSG00000182512.4|glutaredoxin 5
hg19_v2_chr2_-_166651191_166651213	0.0203011	UACAGUA	ENST00000392701.3|GALNT3|ENSG00000115339.9|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)
hg19_v2_chrX_+_24167746_24167811	0.0201311	UACAGUA	ENST00000428571.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000539115.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked
hg19_v2_chr5_+_54455946_54456019	0.0193891	UACAGUA	ENST00000503787.1|GPX8|ENSG00000164294.9|glutathione peroxidase 8 (putative) 	ENST00000296734.6|GPX8|ENSG00000164294.9|glutathione peroxidase 8 (putative) 	ENST00000515370.1|GPX8|ENSG00000164294.9|glutathione peroxidase 8 (putative)
hg19_v2_chr10_-_43903217_43903267	0.0193444	UACAGUA	ENST00000357065.4|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr17_+_30677136_30677205	0.0191478	UACAGUA	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr10_+_124913793_124913927	0.0182876	UACAGUA	ENST00000368865.4|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein 	ENST00000538238.1|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein 	ENST00000368859.2|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein
hg19_v2_chr2_+_228336849_228336904	0.0180092	UACAGUA	ENST00000409979.2|AGFG1|ENSG00000173744.13|ArfGAP with FG repeats 1 	ENST00000310078.8|AGFG1|ENSG00000173744.13|ArfGAP with FG repeats 1
hg19_v2_chr12_+_52345448_52345532	0.0177662	UACAGUA	ENST00000257963.4|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000541224.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000426655.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000536420.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000415850.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB
hg19_v2_chr6_-_52926539_52926668	0.0176075	UACAGUA	ENST00000350082.5|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase 	ENST00000356971.3|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase
hg19_v2_chr2_-_214014959_214015058	0.017459	UACAGUA	ENST00000442445.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000457361.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000342002.2|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios)
hg19_v2_chr20_+_39657454_39657470	0.017353	UACAGUA	ENST00000361337.2|TOP1|ENSG00000198900.5|topoisomerase (DNA) I
hg19_v2_chr2_-_100106419_100106522	0.0167886	UACAGUA	ENST00000393445.3|REV1|ENSG00000135945.5|REV1, polymerase (DNA directed) 	ENST00000258428.3|REV1|ENSG00000135945.5|REV1, polymerase (DNA directed)
hg19_v2_chr18_+_67956135_67956144	0.0166161	UACAGUA	ENST00000397942.3|SOCS6|ENSG00000170677.5|suppressor of cytokine signaling 6
hg19_v2_chr15_-_77363513_77363570	0.0165319	UACAGUA	ENST00000267970.4|TSPAN3|ENSG00000140391.10|tetraspanin 3
hg19_v2_chr20_-_61569227_61569287	0.0162429	UACAGUA	ENST00000266070.4|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000395335.2|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000266071.5|DIDO1|ENSG00000101191.12|death inducer-obliterator 1
hg19_v2_chr2_-_164592497_164592573	0.0150574	UACAGUA	ENST00000333129.3|FIGN|ENSG00000182263.9|fidgetin 	ENST00000409634.1|FIGN|ENSG00000182263.9|fidgetin
hg19_v2_chr14_+_75230011_75230120	0.0147732	UACAGUA	ENST00000552421.1|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000325680.7|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000238571.3|YLPM1|ENSG00000119596.13|YLP motif containing 1
hg19_v2_chr3_+_9773409_9773479	0.0147303	UACAGUA	ENST00000433861.2|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000424362.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000383829.2|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000302054.3|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000420291.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1
hg19_v2_chr16_+_66400533_66400545	0.0144064	UACAGUA	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr9_+_128509624_128509658	0.0143193	UACAGUA	ENST00000342287.5|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3 	ENST00000373487.4|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3
hg19_v2_chr9_-_3525968_3526016	0.0141817	UACAGUA	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr8_-_110346614_110346722	0.0140998	UACAGUA	ENST00000239690.4|NUDCD1|ENSG00000120526.6|NudC domain containing 1
hg19_v2_chr6_-_56707943_56708013	0.0139547	UACAGUA	ENST00000370769.4|DST|ENSG00000151914.13|dystonin 	ENST00000421834.2|DST|ENSG00000151914.13|dystonin 	ENST00000312431.6|DST|ENSG00000151914.13|dystonin 	ENST00000361203.3|DST|ENSG00000151914.13|dystonin 	ENST00000523817.1|DST|ENSG00000151914.13|dystonin
hg19_v2_chr18_+_8717369_8717384	0.0135471	UACAGUA	ENST00000359865.3|SOGA2|ENSG00000168502.13|SOGA family member 2 	ENST00000400050.3|SOGA2|ENSG00000168502.13|SOGA family member 2 	ENST00000306285.7|SOGA2|ENSG00000168502.13|SOGA family member 2
hg19_v2_chr4_-_1242764_1242942	0.0130576	UACAGUA	ENST00000514210.1|CTBP1|ENSG00000159692.11|C-terminal binding protein 1 	ENST00000382952.3|CTBP1|ENSG00000159692.11|C-terminal binding protein 1 	ENST00000290921.6|CTBP1|ENSG00000159692.11|C-terminal binding protein 1
hg19_v2_chr13_-_39612176_39612258	0.0121989	UACAGUA	ENST00000352251.3|PROSER1|ENSG00000120685.15|proline and serine rich 1 	ENST00000350125.3|PROSER1|ENSG00000120685.15|proline and serine rich 1
hg19_v2_chr11_-_118661828_118661886	0.0121889	UACAGUA	ENST00000264018.4|DDX6|ENSG00000110367.7|DEAD (Asp-Glu-Ala-Asp) box helicase 6
hg19_v2_chr1_+_204042723_204042784	0.0120199	UACAGUA	ENST00000367204.1|SOX13|ENSG00000143842.10|SRY (sex determining region Y)-box 13
hg19_v2_chr6_-_75915757_75915775	0.0119183	UACAGUA	ENST00000322507.8|COL12A1|ENSG00000111799.16|collagen, type XII, alpha 1
hg19_v2_chr7_+_139026057_139026130	0.0116403	UACAGUA	ENST00000541515.3|LUC7L2|ENSG00000269955.2|LUC7-like 2 (S. cerevisiae)
hg19_v2_chr7_+_104654623_104654669	0.0114432	UACAGUA	ENST00000311117.3|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334877.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000257745.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334914.7|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000478990.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000495267.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000476671.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E
hg19_v2_chr3_+_9439400_9439414	0.0108744	UACAGUA	ENST00000450326.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402198.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402466.1|SETD5|ENSG00000168137.11|SET domain containing 5
hg19_v2_chr1_-_155532484_155532605	0.0108226	UACAGUA	ENST00000368346.3|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila) 	ENST00000548830.1|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila)
hg19_v2_chr12_+_72148614_72148699	0.0103767	UACAGUA	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr1_+_147013182_147013329	0.0101983	UACAGUA	ENST00000234739.3|BCL9|ENSG00000116128.5|B-cell CLL/lymphoma 9
hg19_v2_chr16_-_62070305_62070310	0.00994961	UACAGUA	ENST00000584337.1|CDH8|ENSG00000150394.9|cadherin 8, type 2
hg19_v2_chr17_+_17584763_17584804	0.00979317	UACAGUA	ENST00000353383.1|RAI1|ENSG00000108557.13|retinoic acid induced 1
hg19_v2_chrX_-_16888448_16888537	0.00935981	UACAGUA	ENST00000468092.1|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7 	ENST00000404022.1|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7 	ENST00000380087.2|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7
hg19_v2_chr7_+_69064300_69064342	0.00935268	UACAGUA	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr9_+_133454943_133455020	0.00914988	UACAGUA	ENST00000319725.9|FUBP3|ENSG00000107164.15|far upstream element (FUSE) binding protein 3
hg19_v2_chr5_-_114961858_114961876	0.00889206	UACAGUA	ENST00000282382.4|TMED7-TICAM2|ENSG00000251201.4|TMED7-TICAM2 readthrough 	ENST00000456936.3|TMED7|ENSG00000134970.13|transmembrane emp24 protein transport domain containing 7 	ENST00000408996.4|TICAM2|ENSG00000243414.4|toll-like receptor adaptor molecule 2
hg19_v2_chr12_-_96794143_96794264	0.00856241	UACAGUA	ENST00000543119.2|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr7_+_77469439_77469497	0.00845513	UACAGUA	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr5_-_171433819_171433911	0.00832813	UACAGUA	ENST00000296933.6|FBXW11|ENSG00000072803.13|F-box and WD repeat domain containing 11
hg19_v2_chrX_+_118708493_118708506	0.00816982	UACAGUA	ENST00000371558.2|UBE2A|ENSG00000077721.11|ubiquitin-conjugating enzyme E2A
hg19_v2_chr20_+_11871371_11871428	0.00806473	UACAGUA	ENST00000254977.3|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr10_-_120101804_120101843	0.00803738	UACAGUA	ENST00000369183.4|FAM204A|ENSG00000165669.9|family with sequence similarity 204, member A 	ENST00000369172.4|FAM204A|ENSG00000165669.9|family with sequence similarity 204, member A
hg19_v2_chr6_+_36646435_36646498	0.00790206	UACAGUA	ENST00000244741.5|CDKN1A|ENSG00000124762.9|cyclin-dependent kinase inhibitor 1A (p21, Cip1) 	ENST00000405375.1|CDKN1A|ENSG00000124762.9|cyclin-dependent kinase inhibitor 1A (p21, Cip1) 	ENST00000373711.2|CDKN1A|ENSG00000124762.9|cyclin-dependent kinase inhibitor 1A (p21, Cip1)
hg19_v2_chr6_+_161412759_161412846	0.00764115	UACAGUA	ENST00000366919.2|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000392142.4|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000366920.2|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000348824.7|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4
hg19_v2_chr6_-_13711773_13711796	0.00725447	UACAGUA	ENST00000011619.3|RANBP9|ENSG00000010017.9|RAN binding protein 9
hg19_v2_chr3_-_99833333_99833357	0.00722644	UACAGUA	ENST00000354552.3|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like 	ENST00000331335.5|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like 	ENST00000398326.2|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like
hg19_v2_chr14_-_101036119_101036131	0.00702376	UACAGUA	ENST00000355173.2|BEGAIN|ENSG00000183092.11|brain-enriched guanylate kinase-associated
hg19_v2_chr2_+_179345173_179345221	0.00673732	UACAGUA	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr3_-_183735731_183735803	0.00666402	UACAGUA	ENST00000334444.6|ABCC5|ENSG00000114770.12|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
hg19_v2_chr1_+_176432298_176432319	0.00652732	UACAGUA	ENST00000367661.3|PAPPA2|ENSG00000116183.6|pappalysin 2 	ENST00000367662.3|PAPPA2|ENSG00000116183.6|pappalysin 2
hg19_v2_chr12_-_54069856_54069899	0.00615005	UACAGUA	ENST00000602871.1|ATP5G2|ENSG00000135390.13|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)
hg19_v2_chr1_-_150552006_150552093	0.00605103	UACAGUA	ENST00000307940.3|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related) 	ENST00000369026.2|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related)
hg19_v2_chr6_+_71377473_71377520	0.0059327	UACAGUA	ENST00000370452.3|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000316999.5|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000370455.3|SMAP1|ENSG00000112305.10|small ArfGAP 1
hg19_v2_chr14_-_61190754_61190852	0.00590713	UACAGUA	ENST00000216513.4|SIX4|ENSG00000100625.8|SIX homeobox 4
hg19_v2_chr9_-_127905736_127905815	0.0056686	UACAGUA	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr5_+_139175380_139175431	0.00557238	UACAGUA	ENST00000274710.3|PSD2|ENSG00000146005.3|pleckstrin and Sec7 domain containing 2
hg19_v2_chr22_+_29279552_29279586	0.00441559	UACAGUA	ENST00000544604.2|ZNRF3|ENSG00000183579.11|zinc and ring finger 3
hg19_v2_chr16_+_22019404_22019604	0.00436311	UACAGUA	ENST00000542527.2|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000569656.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000562695.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52
hg19_v2_chr12_+_121124599_121124672	0.00385197	UACAGUA	ENST00000228506.3|MLEC|ENSG00000110917.3|malectin
hg19_v2_chr4_+_87515454_87515486	0.00336191	UACAGUA	ENST00000427191.2|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000436978.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000502971.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
hg19_v2_chr20_+_57226284_57226345	0.00252415	UACAGUA	ENST00000458280.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000355957.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000361770.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000312283.8|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000412911.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000359617.4|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000371141.4|STX16|ENSG00000124222.17|syntaxin 16
hg19_v2_chr22_-_43411106_43411165	0.00200231	UACAGUA	ENST00000453643.1|PACSIN2|ENSG00000100266.13|protein kinase C and casein kinase substrate in neurons 2 	ENST00000263246.3|PACSIN2|ENSG00000100266.13|protein kinase C and casein kinase substrate in neurons 2 	ENST00000337959.4|PACSIN2|ENSG00000100266.13|protein kinase C and casein kinase substrate in neurons 2
hg19_v2_chr9_-_126030817_126030906	0.00184153	UACAGUA	ENST00000348403.5|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000447404.2|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000360998.3|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein
hg19_v2_chr2_-_9143786_9143942	0.00172255	UACAGUA	ENST00000462696.1|MBOAT2|ENSG00000143797.7|membrane bound O-acyltransferase domain containing 2 	ENST00000305997.3|MBOAT2|ENSG00000143797.7|membrane bound O-acyltransferase domain containing 2
hg19_v2_chr20_+_35201857_35201891	0.00152613	UACAGUA	ENST00000373874.2|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr18_+_60190226_60190314	0.0013783	UACAGUA	ENST00000269499.5|ZCCHC2|ENSG00000141664.5|zinc finger, CCHC domain containing 2
hg19_v2_chr18_-_35145593_35145614	0.000791778	UACAGUA	ENST00000334919.5|CELF4|ENSG00000101489.14|CUGBP, Elav-like family member 4 	ENST00000591282.1|CELF4|ENSG00000101489.14|CUGBP, Elav-like family member 4 	ENST00000588597.1|CELF4|ENSG00000101489.14|CUGBP, Elav-like family member 4
hg19_v2_chr6_+_116421976_116422054	0.000672199	UACAGUA	ENST00000319550.4|NT5DC1|ENSG00000178425.9|5'-nucleotidase domain containing 1 	ENST00000419791.1|NT5DC1|ENSG00000178425.9|5'-nucleotidase domain containing 1
hg19_v2_chr2_-_9695847_9695966	0.000520081	UACAGUA	ENST00000310823.3|ADAM17|ENSG00000151694.8|ADAM metallopeptidase domain 17 	ENST00000497134.1|ADAM17|ENSG00000151694.8|ADAM metallopeptidase domain 17
hg19_v2_chr6_-_154831779_154831801	0.000451572	UACAGUA	ENST00000607772.1|CNKSR3|ENSG00000153721.13|CNKSR family member 3
hg19_v2_chr5_-_78809950_78810040	0.000327358	UACAGUA	ENST00000334082.6|HOMER1|ENSG00000152413.10|homer homolog 1 (Drosophila)
hg19_v2_chr4_-_74124502_74124523	0.000208852	UACAGUA	ENST00000358602.4|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000330838.6|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000561029.1|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17
