hg19_v2_chr10_+_112631547_112631596	0.030709	UAAGACU	ENST00000280154.7|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor) 	ENST00000393104.2|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor)
hg19_v2_chr3_+_186501336_186501386	0.0279356	UAAGACU	ENST00000323963.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000440191.2|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000356531.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2
hg19_v2_chr15_+_57210818_57210930	0.0262962	UAAGACU	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr21_-_16437255_16437340	0.0252785	UAAGACU	ENST00000400199.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1 	ENST00000400202.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1
hg19_v2_chr16_+_54964740_54964789	0.022693	UAAGACU	ENST00000394636.4|IRX5|ENSG00000176842.10|iroquois homeobox 5
hg19_v2_chr2_-_64881018_64881064	0.0223901	UAAGACU	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chr3_-_15374033_15374136	0.0214173	UAAGACU	ENST00000253688.5|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated) 	ENST00000383791.3|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated)
hg19_v2_chr8_+_48920960_48921011	0.0204551	UAAGACU	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr10_-_32345305_32345376	0.0191359	UAAGACU	ENST00000302418.4|KIF5B|ENSG00000170759.10|kinesin family member 5B
hg19_v2_chr10_-_89577910_89578010	0.0187185	UAAGACU	ENST00000308448.7|ATAD1|ENSG00000138138.9|ATPase family, AAA domain containing 1 	ENST00000541004.1|ATAD1|ENSG00000138138.9|ATPase family, AAA domain containing 1
hg19_v2_chr15_+_52311398_52311461	0.0179856	UAAGACU	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr1_-_108507631_108507809	0.0178129	UAAGACU	ENST00000527011.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000370056.4|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr5_+_60628074_60628100	0.0166288	UAAGACU	ENST00000252744.5|ZSWIM6|ENSG00000130449.5|zinc finger, SWIM-type containing 6
hg19_v2_chr5_-_131132614_131132648	0.0162119	UAAGACU	ENST00000307968.7|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000307954.8|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr5_+_122110691_122110898	0.0156011	UAAGACU	ENST00000379516.2|SNX2|ENSG00000205302.2|sorting nexin 2 	ENST00000505934.1|SNX2|ENSG00000205302.2|sorting nexin 2 	ENST00000514949.1|SNX2|ENSG00000205302.2|sorting nexin 2
hg19_v2_chr5_-_114880533_114880591	0.0154875	UAAGACU	ENST00000274457.3|FEM1C|ENSG00000145780.6|fem-1 homolog c (C. elegans)
hg19_v2_chr10_-_75255724_75255792	0.014764	UAAGACU	ENST00000342558.3|PPP3CB|ENSG00000107758.11|protein phosphatase 3, catalytic subunit, beta isozyme 	ENST00000360663.5|PPP3CB|ENSG00000107758.11|protein phosphatase 3, catalytic subunit, beta isozyme 	ENST00000394829.2|PPP3CB|ENSG00000107758.11|protein phosphatase 3, catalytic subunit, beta isozyme 	ENST00000394828.2|PPP3CB|ENSG00000107758.11|protein phosphatase 3, catalytic subunit, beta isozyme 	ENST00000394822.2|PPP3CB|ENSG00000107758.11|protein phosphatase 3, catalytic subunit, beta isozyme
hg19_v2_chr10_-_27149792_27149850	0.0141272	UAAGACU	ENST00000376140.3|ABI1|ENSG00000136754.12|abl-interactor 1 	ENST00000376170.4|ABI1|ENSG00000136754.12|abl-interactor 1
hg19_v2_chr5_-_76788317_76788421	0.0140185	UAAGACU	ENST00000296679.4|WDR41|ENSG00000164253.8|WD repeat domain 41
hg19_v2_chr14_-_50698276_50698304	0.0134065	UAAGACU	ENST00000216373.5|SOS2|ENSG00000100485.7|son of sevenless homolog 2 (Drosophila)
hg19_v2_chr1_+_97187318_97187380	0.0122486	UAAGACU	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr1_+_90098606_90098635	0.0119131	UAAGACU	ENST00000370454.4|LRRC8C|ENSG00000171488.10|leucine rich repeat containing 8 family, member C
hg19_v2_chrY_+_15016725_15016769	0.0118477	UAAGACU	ENST00000336079.3|DDX3Y|ENSG00000067048.12|DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
hg19_v2_chr13_-_107220455_107220517	0.011696	UAAGACU	ENST00000400198.3|ARGLU1|ENSG00000134884.9|arginine and glutamate rich 1
hg19_v2_chr5_-_79287060_79287093	0.0114766	UAAGACU	ENST00000512560.1|MTX3|ENSG00000177034.10|metaxin 3 	ENST00000509852.1|MTX3|ENSG00000177034.10|metaxin 3 	ENST00000512528.1|MTX3|ENSG00000177034.10|metaxin 3
hg19_v2_chr2_+_42396472_42396563	0.011316	UAAGACU	ENST00000318522.5|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4 	ENST00000402711.2|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4
hg19_v2_chr13_+_50571155_50571229	0.0111405	UAAGACU	ENST00000420995.2|TRIM13|ENSG00000204977.5|tripartite motif containing 13 	ENST00000378182.3|TRIM13|ENSG00000204977.5|tripartite motif containing 13 	ENST00000356017.4|TRIM13|ENSG00000204977.5|tripartite motif containing 13 	ENST00000457662.2|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr9_-_72374848_72374894	0.0105519	UAAGACU	ENST00000377200.5|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000340434.4|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000472967.2|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1
hg19_v2_chr5_+_56469775_56469837	0.0104673	UAAGACU	ENST00000424459.3|GPBP1|ENSG00000062194.11|GC-rich promoter binding protein 1
hg19_v2_chr12_-_93323013_93323112	0.00916201	UAAGACU	ENST00000322349.8|EEA1|ENSG00000102189.12|early endosome antigen 1
hg19_v2_chr15_-_49338748_49338765	0.0090967	UAAGACU	ENST00000559471.1|SECISBP2L|ENSG00000138593.4|SECIS binding protein 2-like
hg19_v2_chr15_-_64648273_64648442	0.0085387	UAAGACU	ENST00000607537.1|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303052.7|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303032.6|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1
hg19_v2_chr6_-_166075557_166075588	0.00840075	UAAGACU	ENST00000539869.2|PDE10A|ENSG00000112541.9|phosphodiesterase 10A 	ENST00000366882.1|PDE10A|ENSG00000112541.9|phosphodiesterase 10A
hg19_v2_chr18_-_21977748_21977823	0.00762544	UAAGACU	ENST00000399441.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A 	ENST00000319481.3|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr9_+_101867359_101867376	0.00752889	UAAGACU	ENST00000374994.4|TGFBR1|ENSG00000106799.8|transforming growth factor, beta receptor 1
hg19_v2_chr2_-_68290106_68290157	0.00670312	UAAGACU	ENST00000407324.1|C1D|ENSG00000197223.7|C1D nuclear receptor corepressor 	ENST00000355848.3|C1D|ENSG00000197223.7|C1D nuclear receptor corepressor 	ENST00000409302.1|C1D|ENSG00000197223.7|C1D nuclear receptor corepressor 	ENST00000410067.3|C1D|ENSG00000197223.7|C1D nuclear receptor corepressor
hg19_v2_chr12_-_12419703_12419811	0.00660928	UAAGACU	ENST00000543091.1|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6 	ENST00000261349.4|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6
hg19_v2_chr10_+_98592009_98592061	0.00659961	UAAGACU	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr8_+_42752053_42752154	0.0065424	UAAGACU	ENST00000307602.4|HOOK3|ENSG00000168172.4|hook microtubule-tethering protein 3
hg19_v2_chr12_+_68042495_68042508	0.0064867	UAAGACU	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr15_+_101142722_101142816	0.00643527	UAAGACU	ENST00000332783.7|ASB7|ENSG00000183475.8|ankyrin repeat and SOCS box containing 7 	ENST00000558747.1|ASB7|ENSG00000183475.8|ankyrin repeat and SOCS box containing 7 	ENST00000343276.4|ASB7|ENSG00000183475.8|ankyrin repeat and SOCS box containing 7
hg19_v2_chr6_+_133562472_133562556	0.00626926	UAAGACU	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chr2_+_120517174_120517207	0.00622085	UAAGACU	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr5_+_112043186_112043225	0.00616474	UAAGACU	ENST00000509732.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000457016.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000507379.1|APC|ENSG00000134982.12|adenomatous polyposis coli
hg19_v2_chr7_-_120498357_120498456	0.00599763	UAAGACU	ENST00000415871.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000222747.3|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000430985.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chr15_+_44829255_44829331	0.00561457	UAAGACU	ENST00000261868.5|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J 	ENST00000424492.3|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J
hg19_v2_chr9_-_34126730_34126771	0.00539211	UAAGACU	ENST00000361264.4|DCAF12|ENSG00000198876.8|DDB1 and CUL4 associated factor 12
hg19_v2_chr9_+_96793076_96793128	0.00527106	UAAGACU	ENST00000375360.3|PTPDC1|ENSG00000158079.10|protein tyrosine phosphatase domain containing 1
hg19_v2_chr4_+_123747834_123747863	0.00525646	UAAGACU	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr6_+_163835669_163835693	0.0052313	UAAGACU	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr22_-_46933067_46933067	0.005227	UAAGACU	ENST00000262738.3|CELSR1|ENSG00000075275.12|cadherin, EGF LAG seven-pass G-type receptor 1 	ENST00000395964.1|CELSR1|ENSG00000075275.12|cadherin, EGF LAG seven-pass G-type receptor 1
hg19_v2_chr4_+_159690218_159690290	0.00472075	UAAGACU	ENST00000264433.6|FNIP2|ENSG00000052795.8|folliculin interacting protein 2
hg19_v2_chr17_-_45266542_45266683	0.00447535	UAAGACU	ENST00000531206.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000527547.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000446365.2|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000575483.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000066544.3|CDC27|ENSG00000004897.7|cell division cycle 27
hg19_v2_chr2_+_228029281_228029330	0.0042671	UAAGACU	ENST00000396578.3|COL4A3|ENSG00000169031.14|collagen, type IV, alpha 3 (Goodpasture antigen)
hg19_v2_chr10_+_63661053_63661079	0.00379391	UAAGACU	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr16_+_53088885_53088961	0.00371469	UAAGACU	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr3_-_15563229_15563265	0.00369978	UAAGACU	ENST00000383786.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383787.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383785.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383788.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000603808.1|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v2_chr11_-_86666427_86666450	0.00339862	UAAGACU	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr1_-_21113105_21113186	0.00328128	UAAGACU	ENST00000375000.1|HP1BP3|ENSG00000127483.13|heterochromatin protein 1, binding protein 3 	ENST00000419490.1|HP1BP3|ENSG00000127483.13|heterochromatin protein 1, binding protein 3 	ENST00000414993.1|HP1BP3|ENSG00000127483.13|heterochromatin protein 1, binding protein 3 	ENST00000443615.1|HP1BP3|ENSG00000127483.13|heterochromatin protein 1, binding protein 3 	ENST00000312239.5|HP1BP3|ENSG00000127483.13|heterochromatin protein 1, binding protein 3
hg19_v2_chr8_-_67579418_67579498	0.00310868	UAAGACU	ENST00000310421.4|VCPIP1|ENSG00000175073.7|valosin containing protein (p97)/p47 complex interacting protein 1
hg19_v2_chr17_-_36762095_36762212	0.00289198	UAAGACU	ENST00000578925.1|SRCIN1|ENSG00000017373.11|SRC kinase signaling inhibitor 1 	ENST00000264659.7|SRCIN1|ENSG00000017373.11|SRC kinase signaling inhibitor 1
hg19_v2_chr13_+_49550015_49550070	0.00286489	UAAGACU	ENST00000492622.2|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr7_+_155089486_155089599	0.00269787	UAAGACU	ENST00000340368.4|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000344756.4|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000425172.1|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000342407.5|INSIG1|ENSG00000186480.8|insulin induced gene 1
hg19_v2_chr17_+_38219063_38219154	0.00249293	UAAGACU	ENST00000584985.1|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000264637.4|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000450525.2|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha
hg19_v2_chr7_-_105029329_105029376	0.00235472	UAAGACU	ENST00000393651.3|SRPK2|ENSG00000135250.12|SRSF protein kinase 2 	ENST00000460391.1|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr13_-_50367057_50367142	0.00192147	UAAGACU	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr17_-_8534067_8534088	0.00177639	UAAGACU	ENST00000360416.3|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle 	ENST00000269243.4|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle
hg19_v2_chr15_-_56535464_56535521	0.00160899	UAAGACU	ENST00000559447.2|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000422057.1|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000317318.6|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000423270.1|RFX7|ENSG00000181827.10|regulatory factor X, 7
hg19_v2_chr11_-_118047376_118047388	0.00159412	UAAGACU	ENST00000278947.5|SCN2B|ENSG00000149575.5|sodium channel, voltage-gated, type II, beta subunit
hg19_v2_chr2_+_176987088_176987088	0.001494	UAAGACU	ENST00000249499.6|HOXD9|ENSG00000128709.10|homeobox D9
hg19_v2_chrX_+_41192595_41192651	0.00125663	UAAGACU	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr7_-_44924939_44924993	0.00123453	UAAGACU	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr12_+_72148614_72148699	0.00109027	UAAGACU	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr14_-_61116168_61116180	0.00102197	UAAGACU	ENST00000247182.6|SIX1|ENSG00000126778.7|SIX homeobox 1
hg19_v2_chr13_+_100258907_100258953	0.0009358	UAAGACU	ENST00000376355.3|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000376360.1|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000444838.2|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000376354.1|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000339105.4|CLYBL|ENSG00000125246.11|citrate lyase beta like
hg19_v2_chr5_+_55033845_55033870	0.000763438	UAAGACU	ENST00000353507.5|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 	ENST00000514278.2|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 	ENST00000505374.1|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 	ENST00000506511.1|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg19_v2_chr12_-_99548270_99548295	0.0006857	UAAGACU	ENST00000546568.1|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000332712.7|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000546960.1|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v2_chr14_-_105487381_105487485	0.000510958	UAAGACU	ENST00000392590.3|CDCA4|ENSG00000170779.10|cell division cycle associated 4 	ENST00000336219.3|CDCA4|ENSG00000170779.10|cell division cycle associated 4
hg19_v2_chr16_-_46655538_46655538	0.000336384	UAAGACU	ENST00000303383.3|SHCBP1|ENSG00000171241.4|SHC SH2-domain binding protein 1
