hg19_v2_chr2_-_61765732_61765761	0.650824	SOX9	ENST00000443240.1|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast) 	ENST00000436018.1|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast)
hg19_v2_chr1_-_156399184_156399225	0.542127	SOX9	ENST00000368243.1|C1orf61|ENSG00000125462.12|chromosome 1 open reading frame 61 	ENST00000357975.4|C1orf61|ENSG00000125462.12|chromosome 1 open reading frame 61 	ENST00000310027.5|C1orf61|ENSG00000125462.12|chromosome 1 open reading frame 61 	ENST00000400991.2|C1orf61|ENSG00000125462.12|chromosome 1 open reading frame 61
hg19_v2_chr12_+_95611536_95611543	0.540444	SOX9	ENST00000549002.1|VEZT|ENSG00000028203.13|vezatin, adherens junctions transmembrane protein
hg19_v2_chr2_-_240322685_240322738	0.516998	SOX9	ENST00000544989.1|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chr2_-_70475701_70475717	0.475176	SOX9	ENST00000282574.4|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr11_-_95522639_95522725	0.465363	SOX9	ENST00000536839.1|FAM76B|ENSG00000077458.8|family with sequence similarity 76, member B
hg19_v2_chr4_-_110723335_110723356	0.460538	SOX9	ENST00000394634.2|CFI|ENSG00000205403.8|complement factor I
hg19_v2_chr17_-_57232596_57232630	0.441656	SOX9	ENST00000581068.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000330137.7|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr2_-_70475730_70475798	0.429206	SOX9	ENST00000445587.1|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000433529.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000415783.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chrX_+_78003204_78003248	0.423195	SOX9	ENST00000435339.3|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4 	ENST00000514744.1|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4
hg19_v2_chr22_-_42739533_42739622	0.394014	SOX9	ENST00000515426.1|TCF20|ENSG00000100207.14|transcription factor 20 (AR1)
hg19_v2_chr7_+_129710350_129710434	0.383515	SOX9	ENST00000335420.5|KLHDC10|ENSG00000128607.9|kelch domain containing 10 	ENST00000463413.1|KLHDC10|ENSG00000128607.9|kelch domain containing 10
hg19_v2_chr10_-_99094458_99094500	0.380769	SOX9	ENST00000371019.2|FRAT2|ENSG00000181274.5|frequently rearranged in advanced T-cell lymphomas 2
hg19_v2_chr1_-_93645818_93645918	0.378245	SOX9	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr4_+_95128748_95128794	0.371754	SOX9	ENST00000359052.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr1_+_173991633_173991655	0.36963	SOX9	ENST00000424181.1|RP11-160H22.3|ENSG00000224977.1|RP11-160H22.3
hg19_v2_chr16_+_30934376_30934392	0.363492	SOX9	ENST00000562798.1|FBXL19|ENSG00000099364.12|F-box and leucine-rich repeat protein 19 	ENST00000471231.2|FBXL19|ENSG00000099364.12|F-box and leucine-rich repeat protein 19
hg19_v2_chr5_+_40841410_40841489	0.347715	SOX9	ENST00000381677.3|CARD6|ENSG00000132357.9|caspase recruitment domain family, member 6
hg19_v2_chr1_+_228337553_228337602	0.344886	SOX9	ENST00000366714.2|GJC2|ENSG00000198835.3|gap junction protein, gamma 2, 47kDa
hg19_v2_chrX_-_106959631_106959775	0.344457	SOX9	ENST00000486554.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372390.4|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr6_-_86353510_86353595	0.341571	SOX9	ENST00000444272.1|SYNCRIP|ENSG00000135316.13|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v2_chr2_+_46926326_46926452	0.338161	SOX9	ENST00000394861.2|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr2_-_175202151_175202151	0.3349	SOX9	ENST00000595354.1|AC018470.1|ENSG00000268241.1|Uncharacterized protein FLJ46347
hg19_v2_chr2_-_160568918_160568979	0.33369	SOX9	ENST00000453016.1|AC009961.3|ENSG00000226266.2|AC009961.3	ENST00000607836.1|AC009961.3|ENSG00000226266.2|AC009961.3
hg19_v2_chr4_+_175204818_175204833	0.32687	SOX9	ENST00000503780.1|CEP44|ENSG00000164118.8|centrosomal protein 44kDa
hg19_v2_chr4_+_95128996_95129056	0.322147	SOX9	ENST00000457823.2|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr6_-_134861089_134861168	0.322076	SOX9	ENST00000606039.1|RP11-557H15.4|ENSG00000232310.2|RP11-557H15.4
hg19_v2_chr6_-_27782548_27782607	0.316738	SOX9	ENST00000333151.3|HIST1H2AJ|ENSG00000182611.3|histone cluster 1, H2aj
hg19_v2_chr5_+_76012009_76012024	0.31645	SOX9	ENST00000505600.1|F2R|ENSG00000181104.6|coagulation factor II (thrombin) receptor
hg19_v2_chr1_-_243418650_243418664	0.313255	SOX9	ENST00000522995.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr15_+_98503922_98503964	0.312788	SOX9	ENST00000268042.6|ARRDC4|ENSG00000140450.7|arrestin domain containing 4
hg19_v2_chr16_-_3068171_3068191	0.311045	SOX9	ENST00000572154.1|CLDN6|ENSG00000184697.6|claudin 6 	ENST00000328796.4|CLDN6|ENSG00000184697.6|claudin 6
hg19_v2_chr2_-_37501692_37501747	0.307539	SOX9	ENST00000443977.1|PRKD3|ENSG00000115825.5|protein kinase D3
hg19_v2_chr15_-_80695917_80695917	0.306102	SOX9	ENST00000559008.1|RP11-210M15.2|ENSG00000259495.1|Uncharacterized protein
hg19_v2_chr4_-_110723194_110723207	0.302991	SOX9	ENST00000394635.3|CFI|ENSG00000205403.8|complement factor I
hg19_v2_chr4_+_95129061_95129198	0.302099	SOX9	ENST00000354268.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr2_-_175869936_175869954	0.295949	SOX9	ENST00000409900.3|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr20_+_48884002_48884088	0.295779	SOX9	ENST00000425497.1|RP11-290F20.3|ENSG00000224397.1|RP11-290F20.3	ENST00000445003.1|RP11-290F20.3|ENSG00000224397.1|RP11-290F20.3
hg19_v2_chr4_+_113152978_113152989	0.293534	SOX9	ENST00000309703.6|AP1AR|ENSG00000138660.7|adaptor-related protein complex 1 associated regulatory protein
hg19_v2_chr2_-_107503558_107503580	0.287375	SOX9	ENST00000361686.4|ST6GAL2|ENSG00000144057.11|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 	ENST00000409087.3|ST6GAL2|ENSG00000144057.11|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
hg19_v2_chr12_+_124457746_124457842	0.2849	SOX9	ENST00000392404.3|ZNF664|ENSG00000179195.11|zinc finger protein 664 	ENST00000538932.2|ZNF664|ENSG00000179195.11|zinc finger protein 664 	ENST00000540762.2|FAM101A|ENSG00000178882.9|family with sequence similarity 101, member A 	ENST00000337815.4|ZNF664|ENSG00000179195.11|zinc finger protein 664
hg19_v2_chr8_+_79578282_79578334	0.274503	SOX9	ENST00000263849.4|ZC2HC1A|ENSG00000104427.7|zinc finger, C2HC-type containing 1A
hg19_v2_chr2_-_61765315_61765422	0.270858	SOX9	ENST00000406957.1|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast) 	ENST00000401558.2|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast)
hg19_v2_chr14_+_102276192_102276208	0.260886	SOX9	ENST00000557714.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr11_-_111649015_111649030	0.257525	SOX9	ENST00000529841.1|RP11-108O10.2|ENSG00000254990.1|RP11-108O10.2
hg19_v2_chr18_+_7946839_7946903	0.254565	SOX9	ENST00000578916.1|PTPRM|ENSG00000173482.12|protein tyrosine phosphatase, receptor type, M
hg19_v2_chr1_-_53018654_53018777	0.251039	SOX9	ENST00000257177.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000355809.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000528642.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000470626.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000371544.3|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11
hg19_v2_chr3_+_187871659_187871779	0.248767	SOX9	ENST00000416784.1|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma 	ENST00000430340.1|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma 	ENST00000414139.1|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma 	ENST00000454789.1|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr15_-_34502197_34502212	0.248738	SOX9	ENST00000557877.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1
hg19_v2_chr6_+_64282447_64282586	0.248381	SOX9	ENST00000370650.2|PTP4A1|ENSG00000112245.6|protein tyrosine phosphatase type IVA, member 1 	ENST00000578299.1|PTP4A1|ENSG00000112245.6|protein tyrosine phosphatase type IVA, member 1
hg19_v2_chr3_+_181429704_181429722	0.247441	SOX9	ENST00000431565.2|SOX2|ENSG00000181449.2|SRY (sex determining region Y)-box 2 	ENST00000325404.1|SOX2|ENSG00000181449.2|SRY (sex determining region Y)-box 2
hg19_v2_chr9_-_99064429_99064442	0.246576	SOX9	ENST00000375263.3|HSD17B3|ENSG00000130948.5|hydroxysteroid (17-beta) dehydrogenase 3
hg19_v2_chr9_-_130517522_130517583	0.245371	SOX9	ENST00000373274.3|SH2D3C|ENSG00000095370.15|SH2 domain containing 3C 	ENST00000420366.1|SH2D3C|ENSG00000095370.15|SH2 domain containing 3C
hg19_v2_chr14_-_95236551_95236576	0.238052	SOX9	ENST00000238558.3|GSC|ENSG00000133937.3|goosecoid homeobox
hg19_v2_chr11_+_110225855_110226016	0.235053	SOX9	ENST00000526605.1|RP11-347E10.1|ENSG00000254416.1|RP11-347E10.1	ENST00000526703.1|RP11-347E10.1|ENSG00000254416.1|RP11-347E10.1
hg19_v2_chr1_-_221915418_221915518	0.233928	SOX9	ENST00000323825.3|DUSP10|ENSG00000143507.13|dual specificity phosphatase 10 	ENST00000366899.3|DUSP10|ENSG00000143507.13|dual specificity phosphatase 10
hg19_v2_chr1_-_26232951_26232959	0.229681	SOX9	ENST00000426559.2|STMN1|ENSG00000117632.16|stathmin 1 	ENST00000455785.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr4_+_54243798_54243854	0.229678	SOX9	ENST00000337488.6|FIP1L1|ENSG00000145216.11|factor interacting with PAPOLA and CPSF1 	ENST00000358575.5|FIP1L1|ENSG00000145216.11|factor interacting with PAPOLA and CPSF1 	ENST00000507922.1|FIP1L1|ENSG00000145216.11|factor interacting with PAPOLA and CPSF1
hg19_v2_chr13_+_110958124_110958159	0.228755	SOX9	ENST00000400163.2|COL4A2|ENSG00000134871.13|collagen, type IV, alpha 2
hg19_v2_chr16_+_68573640_68573698	0.226324	SOX9	ENST00000398253.2|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein 	ENST00000573161.1|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein
hg19_v2_chr14_-_31495569_31495636	0.225819	SOX9	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chr10_+_97803151_97803348	0.224995	SOX9	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr6_+_56911336_56911347	0.223364	SOX9	ENST00000370733.4|KIAA1586|ENSG00000168116.9|KIAA1586
hg19_v2_chr6_+_100054606_100054606	0.22115	SOX9	ENST00000369215.4|PRDM13|ENSG00000112238.11|PR domain containing 13
hg19_v2_chr10_+_91461337_91461380	0.218436	SOX9	ENST00000260753.4|KIF20B|ENSG00000138182.10|kinesin family member 20B 	ENST00000416354.1|KIF20B|ENSG00000138182.10|kinesin family member 20B 	ENST00000394289.2|KIF20B|ENSG00000138182.10|kinesin family member 20B 	ENST00000371728.3|KIF20B|ENSG00000138182.10|kinesin family member 20B
hg19_v2_chr18_-_24128496_24128554	0.216628	SOX9	ENST00000417602.1|KCTD1|ENSG00000134504.8|potassium channel tetramerization domain containing 1
hg19_v2_chr4_+_54243862_54243874	0.216509	SOX9	ENST00000306932.6|FIP1L1|ENSG00000145216.11|factor interacting with PAPOLA and CPSF1
hg19_v2_chr6_+_89790459_89790479	0.212609	SOX9	ENST00000369472.1|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr2_-_158182322_158182358	0.211389	SOX9	ENST00000420719.2|ERMN|ENSG00000136541.10|ermin, ERM-like protein 	ENST00000409216.1|ERMN|ENSG00000136541.10|ermin, ERM-like protein
hg19_v2_chr6_-_135375921_135375969	0.210969	SOX9	ENST00000367820.2|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae) 	ENST00000314674.3|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae) 	ENST00000524715.1|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae) 	ENST00000415177.2|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae) 	ENST00000367826.2|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae)
hg19_v2_chr10_+_69644404_69644427	0.209405	SOX9	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr11_-_8892464_8892677	0.203509	SOX9	ENST00000527347.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5 	ENST00000526241.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5 	ENST00000526126.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5 	ENST00000530938.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5 	ENST00000526057.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5
hg19_v2_chr4_+_113152881_113152912	0.2022	SOX9	ENST00000274000.5|AP1AR|ENSG00000138660.7|adaptor-related protein complex 1 associated regulatory protein
hg19_v2_chr2_-_201828356_201828412	0.20188	SOX9	ENST00000234296.2|ORC2|ENSG00000115942.4|origin recognition complex, subunit 2
hg19_v2_chr6_-_41040195_41040263	0.201449	SOX9	ENST00000463088.1|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1 	ENST00000469104.1|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1 	ENST00000486443.1|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1
hg19_v2_chr10_+_49514698_49514736	0.200096	SOX9	ENST00000432379.1|MAPK8|ENSG00000107643.11|mitogen-activated protein kinase 8 	ENST00000429041.1|MAPK8|ENSG00000107643.11|mitogen-activated protein kinase 8 	ENST00000374189.1|MAPK8|ENSG00000107643.11|mitogen-activated protein kinase 8
hg19_v2_chrX_-_15872914_15873054	0.199953	SOX9	ENST00000380291.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000545766.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000421527.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000329235.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit
hg19_v2_chr11_-_95522907_95522989	0.199892	SOX9	ENST00000358780.5|FAM76B|ENSG00000077458.8|family with sequence similarity 76, member B 	ENST00000542135.1|FAM76B|ENSG00000077458.8|family with sequence similarity 76, member B
hg19_v2_chr8_-_101965559_101965570	0.198479	SOX9	ENST00000353245.3|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr3_-_149688502_149688526	0.198404	SOX9	ENST00000481767.1|PFN2|ENSG00000070087.9|profilin 2 	ENST00000475518.1|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr7_-_27239703_27239725	0.196594	SOX9	ENST00000222753.4|HOXA13|ENSG00000106031.6|homeobox A13
hg19_v2_chr17_-_57232525_57232584	0.195413	SOX9	ENST00000583380.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000580541.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000578105.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000437036.2|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr1_+_93913713_93913839	0.192993	SOX9	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr21_-_40720974_40720994	0.191726	SOX9	ENST00000380748.1|HMGN1|ENSG00000205581.6|high mobility group nucleosome binding domain 1
hg19_v2_chr11_+_28724129_28724184	0.191032	SOX9	ENST00000513853.1|RP11-115J23.1|ENSG00000249867.1|RP11-115J23.1
hg19_v2_chr3_-_182698381_182698431	0.190518	SOX9	ENST00000292782.4|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr21_-_40720995_40721126	0.189926	SOX9	ENST00000380749.5|HMGN1|ENSG00000205581.6|high mobility group nucleosome binding domain 1
hg19_v2_chr14_-_65569186_65569243	0.18969	SOX9	ENST00000555932.1|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000358664.4|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000284165.6|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000358402.4|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000246163.2|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000556979.1|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000555667.1|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000557746.1|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000556443.1|MAX|ENSG00000125952.14|MYC associated factor X
hg19_v2_chr1_+_24286287_24286326	0.188927	SOX9	ENST00000334351.7|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2 	ENST00000374468.1|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2
hg19_v2_chr7_-_11871815_11871831	0.188744	SOX9	ENST00000423059.4|THSD7A|ENSG00000005108.11|thrombospondin, type I, domain containing 7A
hg19_v2_chr2_+_74212073_74212259	0.188709	SOX9	ENST00000441217.1|AC073046.25|ENSG00000235499.1|AC073046.25
hg19_v2_chr10_+_94050913_94050965	0.188061	SOX9	ENST00000358935.2|MARCH5|ENSG00000198060.5|membrane-associated ring finger (C3HC4) 5
hg19_v2_chr10_+_70748487_70748498	0.188024	SOX9	ENST00000361983.4|KIAA1279|ENSG00000198954.4|KIAA1279
hg19_v2_chr6_+_119215308_119215391	0.187859	SOX9	ENST00000229595.5|ASF1A|ENSG00000111875.7|anti-silencing function 1A histone chaperone
hg19_v2_chr19_+_7660716_7660802	0.18724	SOX9	ENST00000160298.4|CAMSAP3|ENSG00000076826.5|calmodulin regulated spectrin-associated protein family, member 3 	ENST00000446248.2|CAMSAP3|ENSG00000076826.5|calmodulin regulated spectrin-associated protein family, member 3
hg19_v2_chr17_-_16472483_16472533	0.186769	SOX9	ENST00000395824.1|ZNF287|ENSG00000141040.10|zinc finger protein 287 	ENST00000448349.2|ZNF287|ENSG00000141040.10|zinc finger protein 287 	ENST00000395825.3|ZNF287|ENSG00000141040.10|zinc finger protein 287
hg19_v2_chr19_+_58514229_58514289	0.185002	SOX9	ENST00000546949.1|CTD-2368P22.1|ENSG00000176593.3|HCG1811579; Uncharacterized protein  	ENST00000553254.1|CTD-2368P22.1|ENSG00000176593.3|HCG1811579; Uncharacterized protein  	ENST00000547364.1|CTD-2368P22.1|ENSG00000176593.3|HCG1811579; Uncharacterized protein
hg19_v2_chr16_-_75590114_75590184	0.179536	SOX9	ENST00000568377.1|TMEM231|ENSG00000205084.6|transmembrane protein 231 	ENST00000565067.1|TMEM231|ENSG00000205084.6|transmembrane protein 231 	ENST00000258173.6|TMEM231|ENSG00000205084.6|transmembrane protein 231
hg19_v2_chr18_-_44497308_44497499	0.177702	SOX9	ENST00000585916.1|PIAS2|ENSG00000078043.11|protein inhibitor of activated STAT, 2 	ENST00000324794.7|PIAS2|ENSG00000078043.11|protein inhibitor of activated STAT, 2 	ENST00000545673.1|PIAS2|ENSG00000078043.11|protein inhibitor of activated STAT, 2
hg19_v2_chr7_+_77167376_77167395	0.177562	SOX9	ENST00000435495.2|PTPN12|ENSG00000127947.11|protein tyrosine phosphatase, non-receptor type 12
hg19_v2_chr6_-_24877490_24877583	0.174672	SOX9	ENST00000540914.1|FAM65B|ENSG00000111913.11|family with sequence similarity 65, member B 	ENST00000378023.4|FAM65B|ENSG00000111913.11|family with sequence similarity 65, member B
hg19_v2_chr18_-_74728998_74729051	0.173702	SOX9	ENST00000359645.3|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397875.3|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397869.3|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000578193.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000578873.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397866.4|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000528160.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000527041.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000526111.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397865.5|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000382582.3|MBP|ENSG00000197971.10|myelin basic protein
hg19_v2_chr12_-_88974236_88974256	0.173346	SOX9	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chr7_+_94537542_94537591	0.171268	SOX9	ENST00000433881.1|PPP1R9A|ENSG00000158528.7|protein phosphatase 1, regulatory subunit 9A
hg19_v2_chr7_-_107968999_107969099	0.169308	SOX9	ENST00000456431.1|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule
hg19_v2_chr12_-_122985067_122985268	0.169234	SOX9	ENST00000540586.1|ZCCHC8|ENSG00000033030.9|zinc finger, CCHC domain containing 8 	ENST00000543897.1|ZCCHC8|ENSG00000033030.9|zinc finger, CCHC domain containing 8
hg19_v2_chr14_-_103989033_103989176	0.168375	SOX9	ENST00000553878.1|CKB|ENSG00000166165.8|creatine kinase, brain 	ENST00000557530.1|CKB|ENSG00000166165.8|creatine kinase, brain
hg19_v2_chr1_+_244998918_244998975	0.167537	SOX9	ENST00000366528.3|COX20|ENSG00000203667.5|COX20 cytochrome C oxidase assembly factor
hg19_v2_chr5_+_172068232_172068320	0.167323	SOX9	ENST00000520919.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000522853.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000369800.5|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B
hg19_v2_chr7_+_16793160_16793160	0.166027	SOX9	ENST00000262067.4|TSPAN13|ENSG00000106537.7|tetraspanin 13
hg19_v2_chr6_-_41040268_41040353	0.164923	SOX9	ENST00000373154.2|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1 	ENST00000244558.9|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1 	ENST00000464633.1|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1 	ENST00000424266.2|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1 	ENST00000479950.1|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1 	ENST00000482515.1|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1
hg19_v2_chr12_-_2966193_2966213	0.164838	SOX9	ENST00000382678.3|AC005841.1|ENSG00000206044.3|Uncharacterized protein ENSP00000372125
hg19_v2_chr11_+_34073195_34073266	0.16472	SOX9	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr22_+_38864041_38864150	0.164541	SOX9	ENST00000216014.4|KDELR3|ENSG00000100196.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 	ENST00000409006.3|KDELR3|ENSG00000100196.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
hg19_v2_chr1_-_243418621_243418648	0.163714	SOX9	ENST00000366544.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa 	ENST00000366543.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr6_-_64029879_64029891	0.163458	SOX9	ENST00000370658.5|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain 	ENST00000485906.2|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain 	ENST00000370657.4|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain
hg19_v2_chr11_-_102323740_102323780	0.163174	SOX9	ENST00000398136.2|TMEM123|ENSG00000152558.10|transmembrane protein 123
hg19_v2_chr9_+_19408999_19409057	0.162373	SOX9	ENST00000340967.2|ACER2|ENSG00000177076.4|alkaline ceramidase 2
hg19_v2_chr4_+_24661479_24661534	0.160314	SOX9	ENST00000569621.1|RP11-496D24.2|ENSG00000261121.1|RP11-496D24.2
hg19_v2_chr4_-_110723134_110723181	0.160232	SOX9	ENST00000510800.1|CFI|ENSG00000205403.8|complement factor I 	ENST00000512148.1|CFI|ENSG00000205403.8|complement factor I
hg19_v2_chr9_-_123476612_123476698	0.160046	SOX9	ENST00000426959.1|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chrX_+_129473859_129473904	0.159937	SOX9	ENST00000424447.1|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14
hg19_v2_chr13_+_53029564_53029650	0.159776	SOX9	ENST00000468284.1|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000378034.3|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000258607.5|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000378037.5|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2
hg19_v2_chr2_-_55277692_55277734	0.15723	SOX9	ENST00000394611.2|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr1_+_185014496_185014518	0.157188	SOX9	ENST00000367510.3|RNF2|ENSG00000121481.6|ring finger protein 2
hg19_v2_chr15_-_64673630_64673648	0.157003	SOX9	ENST00000558008.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000559519.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000380258.2|KIAA0101|ENSG00000166803.6|KIAA0101
hg19_v2_chr4_+_2819883_2819948	0.154896	SOX9	ENST00000511747.1|SH3BP2|ENSG00000087266.11|SH3-domain binding protein 2 	ENST00000503393.2|SH3BP2|ENSG00000087266.11|SH3-domain binding protein 2
hg19_v2_chr8_+_42195972_42195991	0.154653	SOX9	ENST00000532157.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta 	ENST00000265421.4|POLB|ENSG00000070501.7|polymerase (DNA directed), beta 	ENST00000520008.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta
hg19_v2_chr1_+_200708671_200708744	0.154497	SOX9	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr3_+_25469724_25469773	0.153577	SOX9	ENST00000437042.2|RARB|ENSG00000077092.14|retinoic acid receptor, beta
hg19_v2_chr13_-_107214291_107214305	0.153475	SOX9	ENST00000375926.1|ARGLU1|ENSG00000134884.9|arginine and glutamate rich 1
hg19_v2_chr3_-_123339343_123339401	0.151873	SOX9	ENST00000578202.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr21_+_30671690_30671762	0.151283	SOX9	ENST00000399921.1|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr4_-_40516560_40516605	0.150666	SOX9	ENST00000513473.1|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr18_+_56530794_56530845	0.14938	SOX9	ENST00000590285.1|ZNF532|ENSG00000074657.9|zinc finger protein 532 	ENST00000586085.1|ZNF532|ENSG00000074657.9|zinc finger protein 532 	ENST00000589288.1|ZNF532|ENSG00000074657.9|zinc finger protein 532
hg19_v2_chr3_-_128294929_128294929	0.149368	SOX9	ENST00000356020.2|C3orf27|ENSG00000198685.2|chromosome 3 open reading frame 27
hg19_v2_chr16_-_15736881_15736928	0.146529	SOX9	ENST00000540441.2|KIAA0430|ENSG00000166783.15|KIAA0430
hg19_v2_chr12_-_71003568_71003629	0.146221	SOX9	ENST00000547715.1|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B 	ENST00000451516.2|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B 	ENST00000538708.1|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B 	ENST00000550857.1|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B 	ENST00000261266.5|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B
hg19_v2_chrX_+_84498989_84499003	0.146048	SOX9	ENST00000395402.1|ZNF711|ENSG00000147180.12|zinc finger protein 711
hg19_v2_chr7_+_102389434_102389497	0.145639	SOX9	ENST00000409231.3|FAM185A|ENSG00000222011.4|family with sequence similarity 185, member A 	ENST00000418198.1|FAM185A|ENSG00000222011.4|family with sequence similarity 185, member A
hg19_v2_chr11_-_102323489_102323576	0.144747	SOX9	ENST00000361236.3|TMEM123|ENSG00000152558.10|transmembrane protein 123
hg19_v2_chr16_-_53737722_53737790	0.143996	SOX9	ENST00000569716.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000562588.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000562230.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000379925.3|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000563746.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000568653.3|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like
hg19_v2_chr1_-_243418344_243418356	0.143426	SOX9	ENST00000366542.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr17_+_74723031_74723047	0.143372	SOX9	ENST00000586200.1|METTL23|ENSG00000181038.9|methyltransferase like 23
hg19_v2_chr19_+_42254885_42254970	0.143036	SOX9	ENST00000595740.1|CEACAM6|ENSG00000086548.8|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)
hg19_v2_chr11_+_125703204_125703221	0.141682	SOX9	ENST00000534411.1|PATE4|ENSG00000237353.2|prostate and testis expressed 4 	ENST00000457514.2|PATE4|ENSG00000237353.2|prostate and testis expressed 4
hg19_v2_chr3_-_149688896_149688970	0.14079	SOX9	ENST00000239940.7|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr20_-_1317555_1317555	0.139923	SOX9	ENST00000537552.1|AL136531.1|ENSG00000203630.3|HCG2043693; Uncharacterized protein
hg19_v2_chr3_+_25469802_25469866	0.139536	SOX9	ENST00000330688.4|RARB|ENSG00000077092.14|retinoic acid receptor, beta
hg19_v2_chr8_+_42196000_42196021	0.139524	SOX9	ENST00000518925.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta 	ENST00000538005.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta
hg19_v2_chr5_+_140593509_140593509	0.139134	SOX9	ENST00000341948.4|PCDHB13|ENSG00000187372.9|protocadherin beta 13
hg19_v2_chr2_+_30569506_30569525	0.139025	SOX9	ENST00000421976.2|AC109642.1|ENSG00000235997.2|AC109642.1
hg19_v2_chr2_-_55276320_55276334	0.137452	SOX9	ENST00000357376.3|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr15_+_101402041_101402067	0.137276	SOX9	ENST00000558475.1|RP11-66B24.1|ENSG00000259604.1|RP11-66B24.1	ENST00000558641.1|RP11-66B24.1|ENSG00000259604.1|RP11-66B24.1	ENST00000559673.1|RP11-66B24.1|ENSG00000259604.1|RP11-66B24.1
hg19_v2_chrX_-_135962876_135962896	0.136904	SOX9	ENST00000431446.3|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000570135.1|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000320676.7|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000562646.1|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked
hg19_v2_chrX_+_84499038_84499078	0.136444	SOX9	ENST00000373165.3|ZNF711|ENSG00000147180.12|zinc finger protein 711
hg19_v2_chr14_+_32546274_32546295	0.136438	SOX9	ENST00000396582.2|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5
hg19_v2_chr1_-_151689259_151689290	0.136304	SOX9	ENST00000420342.1|CELF3|ENSG00000159409.10|CUGBP, Elav-like family member 3 	ENST00000290583.4|CELF3|ENSG00000159409.10|CUGBP, Elav-like family member 3
hg19_v2_chr5_+_138677515_138677581	0.135958	SOX9	ENST00000265192.4|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000511706.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr5_+_94890840_94890871	0.134876	SOX9	ENST00000504763.1|ARSK|ENSG00000164291.12|arylsulfatase family, member K
hg19_v2_chr14_-_69619823_69619879	0.13452	SOX9	ENST00000341516.5|DCAF5|ENSG00000139990.13|DDB1 and CUL4 associated factor 5
hg19_v2_chr3_-_8686479_8686486	0.133532	SOX9	ENST00000544814.1|SSUH2|ENSG00000125046.10|ssu-2 homolog (C. elegans) 	ENST00000427408.1|SSUH2|ENSG00000125046.10|ssu-2 homolog (C. elegans)
hg19_v2_chr1_+_14075865_14075898	0.133468	SOX9	ENST00000413440.1|PRDM2|ENSG00000116731.18|PR domain containing 2, with ZNF domain
hg19_v2_chr4_-_76598326_76598346	0.132553	SOX9	ENST00000503660.1|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr1_-_184723942_184724047	0.132268	SOX9	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr14_+_102276209_102276242	0.13158	SOX9	ENST00000445439.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000334743.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557095.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr6_-_127840048_127840074	0.131092	SOX9	ENST00000467753.1|SOGA3|ENSG00000214338.6|SOGA family member 3
hg19_v2_chr9_-_85882145_85882202	0.130826	SOX9	ENST00000328788.1|FRMD3|ENSG00000172159.11|FERM domain containing 3
hg19_v2_chr17_-_49124230_49124248	0.130802	SOX9	ENST00000510283.1|SPAG9|ENSG00000008294.16|sperm associated antigen 9 	ENST00000510855.1|SPAG9|ENSG00000008294.16|sperm associated antigen 9
hg19_v2_chr9_-_139658965_139658975	0.129839	SOX9	ENST00000316144.5|LCN15|ENSG00000177984.6|lipocalin 15
hg19_v2_chr6_-_53213780_53213947	0.129729	SOX9	ENST00000304434.6|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370918.4|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr19_-_44123734_44123796	0.128818	SOX9	ENST00000598676.1|ZNF428|ENSG00000131116.7|zinc finger protein 428
hg19_v2_chr2_+_232573222_232573249	0.128625	SOX9	ENST00000341369.7|PTMA|ENSG00000187514.10|prothymosin, alpha 	ENST00000409683.1|PTMA|ENSG00000187514.10|prothymosin, alpha
hg19_v2_chr7_-_99277610_99277626	0.128321	SOX9	ENST00000343703.5|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5 	ENST00000222982.4|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5 	ENST00000439761.1|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5 	ENST00000339843.2|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5
hg19_v2_chr8_-_101965146_101965236	0.128222	SOX9	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr1_-_26232522_26232644	0.128139	SOX9	ENST00000399728.1|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr9_-_99064386_99064410	0.126725	SOX9	ENST00000375262.2|HSD17B3|ENSG00000130948.5|hydroxysteroid (17-beta) dehydrogenase 3
hg19_v2_chr7_+_29519486_29519549	0.126636	SOX9	ENST00000409041.4|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chrX_+_107068959_107068985	0.126536	SOX9	ENST00000451923.1|MID2|ENSG00000080561.9|midline 2
hg19_v2_chr4_-_2264015_2264041	0.126377	SOX9	ENST00000337190.2|MXD4|ENSG00000123933.10|MAX dimerization protein 4
hg19_v2_chr17_+_59489112_59489112	0.12565	SOX9	ENST00000335108.2|C17orf82|ENSG00000187013.2|chromosome 17 open reading frame 82
hg19_v2_chr15_+_89164560_89164601	0.125122	SOX9	ENST00000379231.3|AEN|ENSG00000181026.13|apoptosis enhancing nuclease 	ENST00000559528.1|AEN|ENSG00000181026.13|apoptosis enhancing nuclease
hg19_v2_chr19_+_45971246_45971265	0.124888	SOX9	ENST00000585836.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000417353.2|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000353609.3|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000591858.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000443841.2|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000590335.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v2_chr12_-_122985494_122985543	0.124793	SOX9	ENST00000336229.4|ZCCHC8|ENSG00000033030.9|zinc finger, CCHC domain containing 8
hg19_v2_chr14_+_93357749_93357769	0.124686	SOX9	ENST00000557689.1|RP11-862G15.1|ENSG00000258742.1|RP11-862G15.1
hg19_v2_chr2_+_168725458_168725458	0.124286	SOX9	ENST00000392690.3|B3GALT1|ENSG00000172318.4|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
hg19_v2_chr1_-_68698197_68698214	0.123853	SOX9	ENST00000370973.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000370971.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr14_+_32546145_32546239	0.123469	SOX9	ENST00000556611.1|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5 	ENST00000539826.2|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5
hg19_v2_chr2_+_232573208_232573219	0.122757	SOX9	ENST00000409115.3|PTMA|ENSG00000187514.10|prothymosin, alpha
hg19_v2_chr10_-_15130767_15130782	0.12239	SOX9	ENST00000356189.5|ACBD7|ENSG00000176244.6|acyl-CoA binding domain containing 7
hg19_v2_chr5_+_140557371_140557371	0.120791	SOX9	ENST00000239444.2|PCDHB8|ENSG00000120322.2|protocadherin beta 8
hg19_v2_chr13_+_51913819_51913838	0.120593	SOX9	ENST00000419898.2|SERPINE3|ENSG00000253309.2|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3
hg19_v2_chr3_+_196466710_196466824	0.120567	SOX9	ENST00000327134.3|PAK2|ENSG00000180370.6|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v2_chr9_+_80912059_80912081	0.119979	SOX9	ENST00000347159.2|PSAT1|ENSG00000135069.9|phosphoserine aminotransferase 1 	ENST00000376588.3|PSAT1|ENSG00000135069.9|phosphoserine aminotransferase 1
hg19_v2_chr6_-_27440837_27440912	0.119926	SOX9	ENST00000211936.6|ZNF184|ENSG00000096654.11|zinc finger protein 184
hg19_v2_chr5_+_40679584_40679600	0.119052	SOX9	ENST00000302472.3|PTGER4|ENSG00000171522.5|prostaglandin E receptor 4 (subtype EP4)
hg19_v2_chr7_+_69064300_69064342	0.118515	SOX9	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr4_-_83351294_83351417	0.117881	SOX9	ENST00000502762.1|HNRNPDL|ENSG00000152795.13|heterogeneous nuclear ribonucleoprotein D-like
hg19_v2_chr17_+_7761301_7761396	0.1175	SOX9	ENST00000332439.4|CYB5D1|ENSG00000182224.7|cytochrome b5 domain containing 1 	ENST00000570446.1|CYB5D1|ENSG00000182224.7|cytochrome b5 domain containing 1
hg19_v2_chr9_-_123476719_123476810	0.117323	SOX9	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr14_-_65569057_65569119	0.11728	SOX9	ENST00000555419.1|MAX|ENSG00000125952.14|MYC associated factor X 	ENST00000341653.2|MAX|ENSG00000125952.14|MYC associated factor X
hg19_v2_chr2_+_111880242_111880289	0.117088	SOX9	ENST00000393252.3|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator)
hg19_v2_chr7_+_134464414_134464429	0.116487	SOX9	ENST00000361901.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr14_+_53019993_53020137	0.116195	SOX9	ENST00000542169.2|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C 	ENST00000555622.1|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C
hg19_v2_chr1_+_235491714_235491895	0.115971	SOX9	ENST00000471812.1|GGPS1|ENSG00000152904.7|geranylgeranyl diphosphate synthase 1 	ENST00000358966.2|GGPS1|ENSG00000152904.7|geranylgeranyl diphosphate synthase 1 	ENST00000282841.5|GGPS1|ENSG00000152904.7|geranylgeranyl diphosphate synthase 1 	ENST00000391855.2|GGPS1|ENSG00000152904.7|geranylgeranyl diphosphate synthase 1
hg19_v2_chr2_+_46926048_46926095	0.115905	SOX9	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr6_-_108278456_108278544	0.115473	SOX9	ENST00000429168.1|SEC63|ENSG00000025796.9|SEC63 homolog (S. cerevisiae)
hg19_v2_chr14_+_102276132_102276178	0.115458	SOX9	ENST00000350249.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557621.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556946.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr20_+_42086525_42086568	0.11532	SOX9	ENST00000244020.3|SRSF6|ENSG00000124193.10|serine/arginine-rich splicing factor 6
hg19_v2_chr17_-_56595196_56595266	0.114624	SOX9	ENST00000579921.1|MTMR4|ENSG00000108389.5|myotubularin related protein 4 	ENST00000579925.1|MTMR4|ENSG00000108389.5|myotubularin related protein 4 	ENST00000323456.5|MTMR4|ENSG00000108389.5|myotubularin related protein 4
hg19_v2_chr15_+_41136369_41136420	0.113677	SOX9	ENST00000563656.1|SPINT1|ENSG00000166145.10|serine peptidase inhibitor, Kunitz type 1
hg19_v2_chr5_+_65222500_65222601	0.112774	SOX9	ENST00000511297.1|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein 	ENST00000506030.1|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein
hg19_v2_chr19_-_44124019_44124030	0.112562	SOX9	ENST00000300811.3|ZNF428|ENSG00000131116.7|zinc finger protein 428
hg19_v2_chr2_-_37899323_37899374	0.112471	SOX9	ENST00000295324.3|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3 	ENST00000457889.1|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3
hg19_v2_chr3_-_57583052_57583079	0.112357	SOX9	ENST00000496292.1|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4 	ENST00000489843.1|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4
hg19_v2_chr18_+_20494078_20494108	0.11151	SOX9	ENST00000579124.1|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000577588.1|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000582354.1|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000581819.1|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8
hg19_v2_chr15_-_37392724_37392757	0.111315	SOX9	ENST00000424352.2|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr12_-_31479045_31479074	0.110459	SOX9	ENST00000539409.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A 	ENST00000395766.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr11_+_117103441_117103452	0.110448	SOX9	ENST00000531287.1|RNF214|ENSG00000167257.6|ring finger protein 214 	ENST00000531452.1|RNF214|ENSG00000167257.6|ring finger protein 214
hg19_v2_chr14_-_69619291_69619326	0.110269	SOX9	ENST00000554215.1|DCAF5|ENSG00000139990.13|DDB1 and CUL4 associated factor 5 	ENST00000556847.1|DCAF5|ENSG00000139990.13|DDB1 and CUL4 associated factor 5
hg19_v2_chr7_+_138145145_138145209	0.109828	SOX9	ENST00000415680.2|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr1_+_16085263_16085314	0.109559	SOX9	ENST00000483633.2|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1 	ENST00000502739.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1 	ENST00000431771.2|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1
hg19_v2_chr22_+_21987005_21987021	0.109338	SOX9	ENST00000607942.1|CCDC116|ENSG00000161180.6|coiled-coil domain containing 116 	ENST00000425975.1|CCDC116|ENSG00000161180.6|coiled-coil domain containing 116 	ENST00000292779.3|CCDC116|ENSG00000161180.6|coiled-coil domain containing 116
hg19_v2_chr16_-_67217844_67217943	0.10875	SOX9	ENST00000563902.1|KIAA0895L|ENSG00000196123.8|KIAA0895-like 	ENST00000561621.1|KIAA0895L|ENSG00000196123.8|KIAA0895-like 	ENST00000290881.7|KIAA0895L|ENSG00000196123.8|KIAA0895-like
hg19_v2_chr6_-_127840021_127840047	0.108695	SOX9	ENST00000465909.2|SOGA3|ENSG00000214338.6|SOGA family member 3
hg19_v2_chr6_+_32132360_32132437	0.108632	SOX9	ENST00000333845.6|EGFL8|ENSG00000241404.2|EGF-like-domain, multiple 8 	ENST00000395512.1|EGFL8|ENSG00000241404.2|EGF-like-domain, multiple 8 	ENST00000432129.1|EGFL8|ENSG00000241404.2|EGF-like-domain, multiple 8
hg19_v2_chr5_-_141338377_141338377	0.108312	SOX9	ENST00000510041.1|PCDH12|ENSG00000113555.4|protocadherin 12
hg19_v2_chr9_+_22446814_22446840	0.107686	SOX9	ENST00000325870.2|DMRTA1|ENSG00000176399.3|DMRT-like family A1
hg19_v2_chr1_-_40367668_40367687	0.10762	SOX9	ENST00000397332.2|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog 	ENST00000429311.1|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
hg19_v2_chr16_+_82660635_82660698	0.105959	SOX9	ENST00000567445.1|CDH13|ENSG00000140945.11|cadherin 13 	ENST00000446376.2|CDH13|ENSG00000140945.11|cadherin 13
hg19_v2_chr6_-_53213587_53213772	0.105592	SOX9	ENST00000542638.1|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370913.5|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000541407.1|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr3_+_189507432_189507459	0.105018	SOX9	ENST00000354600.5|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr12_+_78224667_78224685	0.104754	SOX9	ENST00000549464.1|NAV3|ENSG00000067798.9|neuron navigator 3
hg19_v2_chrX_-_20159934_20159976	0.104586	SOX9	ENST00000379593.1|EIF1AX|ENSG00000173674.6|eukaryotic translation initiation factor 1A, X-linked 	ENST00000379607.5|EIF1AX|ENSG00000173674.6|eukaryotic translation initiation factor 1A, X-linked
hg19_v2_chr2_+_170590321_170590408	0.104452	SOX9	ENST00000392647.2|KLHL23|ENSG00000213160.5|kelch-like family member 23
hg19_v2_chrM_+_4431_4475	0.104051	SOX9	ENST00000361453.3|MT-ND2|ENSG00000198763.3|mitochondrially encoded NADH dehydrogenase 2
hg19_v2_chr2_-_200323414_200323468	0.102087	SOX9	ENST00000443023.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr11_-_92930556_92930621	0.102055	SOX9	ENST00000529184.1|SLC36A4|ENSG00000180773.10|solute carrier family 36 (proton/amino acid symporter), member 4
hg19_v2_chr3_-_88108212_88108223	0.101664	SOX9	ENST00000482016.1|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr1_-_173991434_173991556	0.101643	SOX9	ENST00000367696.2|RC3H1|ENSG00000135870.7|ring finger and CCCH-type domains 1
hg19_v2_chr5_-_141338627_141338627	0.101228	SOX9	ENST00000231484.3|PCDH12|ENSG00000113555.4|protocadherin 12
hg19_v2_chr17_-_39743139_39743173	0.101081	SOX9	ENST00000167586.6|KRT14|ENSG00000186847.5|keratin 14
hg19_v2_chr1_+_181003067_181003149	0.100887	SOX9	ENST00000434571.2|MR1|ENSG00000153029.10|major histocompatibility complex, class I-related 	ENST00000367579.3|MR1|ENSG00000153029.10|major histocompatibility complex, class I-related 	ENST00000282990.6|MR1|ENSG00000153029.10|major histocompatibility complex, class I-related 	ENST00000367580.5|MR1|ENSG00000153029.10|major histocompatibility complex, class I-related
hg19_v2_chr14_+_91580357_91580454	0.100676	SOX9	ENST00000298858.4|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000521081.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000520328.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000256324.10|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000524232.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000522170.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000519950.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000523879.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000521077.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000518665.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr10_+_24498060_24498102	0.100533	SOX9	ENST00000376454.3|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000376452.3|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr3_-_149051194_149051269	0.100092	SOX9	ENST00000470080.1|TM4SF18|ENSG00000163762.2|transmembrane 4 L six family member 18
hg19_v2_chrX_+_84499081_84499115	0.0998196	SOX9	ENST00000276123.3|ZNF711|ENSG00000147180.12|zinc finger protein 711
hg19_v2_chr3_+_9773409_9773479	0.0997699	SOX9	ENST00000433861.2|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000424362.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000383829.2|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000302054.3|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000420291.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1
hg19_v2_chr1_-_26233423_26233482	0.0996996	SOX9	ENST00000357865.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr1_+_202183200_202183283	0.0988606	SOX9	ENST00000439764.2|LGR6|ENSG00000133067.13|leucine-rich repeat containing G protein-coupled receptor 6
hg19_v2_chr9_-_35828576_35828734	0.0987694	SOX9	ENST00000377984.2|FAM221B|ENSG00000204930.5|family with sequence similarity 221, member B 	ENST00000423537.2|FAM221B|ENSG00000204930.5|family with sequence similarity 221, member B 	ENST00000472182.1|FAM221B|ENSG00000204930.5|family with sequence similarity 221, member B
hg19_v2_chrX_+_9880412_9880550	0.0986948	SOX9	ENST00000418909.2|SHROOM2|ENSG00000146950.8|shroom family member 2
hg19_v2_chr10_+_24497704_24497743	0.0976702	SOX9	ENST00000376456.4|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000458595.1|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr4_+_37978891_37978931	0.0974032	SOX9	ENST00000446803.2|TBC1D1|ENSG00000065882.11|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
hg19_v2_chr12_+_54378923_54378970	0.09725	SOX9	ENST00000303460.4|HOXC10|ENSG00000180818.4|homeobox C10
hg19_v2_chr12_+_53443963_53443970	0.0971871	SOX9	ENST00000546602.1|TENC1|ENSG00000111077.13|tensin like C1 domain containing phosphatase (tensin 2) 	ENST00000552570.1|TENC1|ENSG00000111077.13|tensin like C1 domain containing phosphatase (tensin 2) 	ENST00000549700.1|TENC1|ENSG00000111077.13|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v2_chr15_+_85144217_85144281	0.0969962	SOX9	ENST00000540936.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000448803.2|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000546275.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000546148.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000442073.3|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000334141.3|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000358472.3|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000502939.2|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000379358.3|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000327179.6|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2
hg19_v2_chr2_-_157198860_157198978	0.0968674	SOX9	ENST00000409572.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2
hg19_v2_chr16_+_838614_838633	0.0961656	SOX9	ENST00000262315.9|CHTF18|ENSG00000127586.12|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) 	ENST00000455171.2|CHTF18|ENSG00000127586.12|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)
hg19_v2_chrX_+_46306714_46306741	0.0950223	SOX9	ENST00000298190.6|KRBOX4|ENSG00000147121.11|KRAB box domain containing 4 	ENST00000377919.2|KRBOX4|ENSG00000147121.11|KRAB box domain containing 4 	ENST00000476762.1|KRBOX4|ENSG00000147121.11|KRAB box domain containing 4 	ENST00000478600.1|KRBOX4|ENSG00000147121.11|KRAB box domain containing 4
hg19_v2_chr10_+_89622870_89622870	0.0941237	SOX9	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr5_+_179135246_179135327	0.0937222	SOX9	ENST00000508787.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chr11_+_125365110_125365110	0.0931064	SOX9	ENST00000527818.1|AP000708.1|ENSG00000255537.1|AP000708.1
hg19_v2_chr1_+_68150744_68150890	0.0930787	SOX9	ENST00000370986.4|GADD45A|ENSG00000116717.7|growth arrest and DNA-damage-inducible, alpha 	ENST00000370985.3|GADD45A|ENSG00000116717.7|growth arrest and DNA-damage-inducible, alpha
hg19_v2_chr3_-_16306432_16306491	0.092969	SOX9	ENST00000383775.4|DPH3|ENSG00000154813.5|diphthamide biosynthesis 3 	ENST00000488423.1|DPH3|ENSG00000154813.5|diphthamide biosynthesis 3
hg19_v2_chr18_-_55288973_55289085	0.0927793	SOX9	ENST00000423481.2|NARS|ENSG00000134440.7|asparaginyl-tRNA synthetase 	ENST00000587194.1|NARS|ENSG00000134440.7|asparaginyl-tRNA synthetase 	ENST00000591599.1|NARS|ENSG00000134440.7|asparaginyl-tRNA synthetase 	ENST00000588661.1|NARS|ENSG00000134440.7|asparaginyl-tRNA synthetase
hg19_v2_chr1_+_27668505_27668582	0.092695	SOX9	ENST00000318074.5|SYTL1|ENSG00000142765.13|synaptotagmin-like 1
hg19_v2_chr1_-_115259337_115259515	0.0925969	SOX9	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr16_+_82660560_82660585	0.0925405	SOX9	ENST00000268613.10|CDH13|ENSG00000140945.11|cadherin 13 	ENST00000565636.1|CDH13|ENSG00000140945.11|cadherin 13 	ENST00000431540.3|CDH13|ENSG00000140945.11|cadherin 13 	ENST00000428848.3|CDH13|ENSG00000140945.11|cadherin 13
hg19_v2_chr14_-_69619689_69619757	0.092423	SOX9	ENST00000389997.6|DCAF5|ENSG00000139990.13|DDB1 and CUL4 associated factor 5 	ENST00000557386.1|DCAF5|ENSG00000139990.13|DDB1 and CUL4 associated factor 5 	ENST00000554681.1|DCAF5|ENSG00000139990.13|DDB1 and CUL4 associated factor 5
hg19_v2_chr15_-_64673665_64673709	0.0921049	SOX9	ENST00000300035.4|KIAA0101|ENSG00000166803.6|KIAA0101
hg19_v2_chr18_-_34408902_34409022	0.0920587	SOX9	ENST00000593035.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000383056.3|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000588909.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000590337.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2
hg19_v2_chr3_-_149051444_149051548	0.0918929	SOX9	ENST00000296059.2|TM4SF18|ENSG00000163762.2|transmembrane 4 L six family member 18
hg19_v2_chr5_+_170288856_170288920	0.0916164	SOX9	ENST00000523189.1|RANBP17|ENSG00000204764.8|RAN binding protein 17
hg19_v2_chr1_+_209602156_209602183	0.0912696	SOX9	ENST00000429156.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding) 	ENST00000366437.3|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding) 	ENST00000603283.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding) 	ENST00000431096.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding)
hg19_v2_chr22_-_19512893_19512946	0.0911988	SOX9	ENST00000403084.1|CLDN5|ENSG00000184113.8|claudin 5 	ENST00000413119.2|CLDN5|ENSG00000184113.8|claudin 5
hg19_v2_chr11_+_196738_196779	0.0901592	SOX9	ENST00000325113.4|ODF3|ENSG00000177947.9|outer dense fiber of sperm tails 3 	ENST00000342593.5|ODF3|ENSG00000177947.9|outer dense fiber of sperm tails 3
hg19_v2_chr12_+_53443680_53443858	0.0901116	SOX9	ENST00000314250.6|TENC1|ENSG00000111077.13|tensin like C1 domain containing phosphatase (tensin 2) 	ENST00000451358.1|TENC1|ENSG00000111077.13|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v2_chr6_+_89790490_89790506	0.0898418	SOX9	ENST00000336032.3|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr18_+_42260861_42260882	0.0895587	SOX9	ENST00000282030.5|SETBP1|ENSG00000152217.12|SET binding protein 1
hg19_v2_chr20_-_30795511_30795594	0.0895492	SOX9	ENST00000246229.4|PLAGL2|ENSG00000126003.6|pleiomorphic adenoma gene-like 2
hg19_v2_chr15_+_71184931_71184974	0.0891577	SOX9	ENST00000560369.1|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49 	ENST00000260382.5|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49
hg19_v2_chr10_-_105845674_105845760	0.0889058	SOX9	ENST00000353479.5|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1 	ENST00000369733.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chr16_+_56970567_56970647	0.0880437	SOX9	ENST00000563911.1|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr10_+_102759545_102759610	0.0873928	SOX9	ENST00000454422.1|LZTS2|ENSG00000107816.13|leucine zipper, putative tumor suppressor 2
hg19_v2_chr15_+_85923856_85923987	0.0868543	SOX9	ENST00000560302.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000394518.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000361243.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000560256.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr16_-_53737795_53737850	0.0865736	SOX9	ENST00000262135.4|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000564374.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000566096.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like
hg19_v2_chr6_-_127840336_127840452	0.0865152	SOX9	ENST00000525778.1|SOGA3|ENSG00000214338.6|SOGA family member 3
hg19_v2_chr12_-_91546926_91546972	0.086321	SOX9	ENST00000550758.1|DCN|ENSG00000011465.12|decorin
hg19_v2_chr10_-_128110441_128110456	0.086	SOX9	ENST00000456514.1|LINC00601|ENSG00000235180.1|long intergenic non-protein coding RNA 601
hg19_v2_chr15_+_41624892_41625111	0.0859768	SOX9	ENST00000260359.6|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000450318.1|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000450592.2|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000559596.1|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000414849.2|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000560747.1|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1 	ENST00000560177.1|NUSAP1|ENSG00000137804.8|nucleolar and spindle associated protein 1
hg19_v2_chr3_-_11623804_11623865	0.0858101	SOX9	ENST00000451674.2|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr5_-_39425222_39425283	0.0858029	SOX9	ENST00000320816.6|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr1_-_167883327_167883352	0.085666	SOX9	ENST00000476818.2|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble) 	ENST00000367851.4|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble) 	ENST00000367848.1|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble)
hg19_v2_chr9_+_2622085_2622174	0.0856361	SOX9	ENST00000382099.2|VLDLR|ENSG00000147852.11|very low density lipoprotein receptor
hg19_v2_chr14_-_88459182_88459236	0.0851989	SOX9	ENST00000544807.2|GALC|ENSG00000054983.12|galactosylceramidase
hg19_v2_chr13_+_98795434_98795480	0.0837962	SOX9	ENST00000376586.2|FARP1|ENSG00000152767.11|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v2_chr6_-_79944336_79944440	0.0835151	SOX9	ENST00000344726.5|HMGN3|ENSG00000118418.10|high mobility group nucleosomal binding domain 3 	ENST00000275036.7|HMGN3|ENSG00000118418.10|high mobility group nucleosomal binding domain 3
hg19_v2_chr19_+_7580944_7581031	0.0835042	SOX9	ENST00000597229.1|ZNF358|ENSG00000198816.5|zinc finger protein 358
hg19_v2_chr6_-_27440460_27440505	0.0830814	SOX9	ENST00000377419.1|ZNF184|ENSG00000096654.11|zinc finger protein 184
hg19_v2_chr7_+_12727250_12727265	0.0826296	SOX9	ENST00000404894.1|ARL4A|ENSG00000122644.8|ADP-ribosylation factor-like 4A
hg19_v2_chr14_-_91976488_91976661	0.0825122	SOX9	ENST00000554684.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000337238.4|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000428424.2|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000554511.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
hg19_v2_chr20_-_40247133_40247194	0.0823288	SOX9	ENST00000373233.3|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6 	ENST00000309279.7|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6
hg19_v2_chr13_+_42846272_42846334	0.0814172	SOX9	ENST00000025301.2|AKAP11|ENSG00000023516.7|A kinase (PRKA) anchor protein 11
hg19_v2_chr7_+_138145076_138145116	0.0809839	SOX9	ENST00000343526.4|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr5_-_146833803_146833829	0.0809414	SOX9	ENST00000512722.1|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr11_+_34073269_34073287	0.0806458	SOX9	ENST00000389645.3|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr18_-_21891460_21891506	0.0805981	SOX9	ENST00000357041.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr17_+_35851570_35851667	0.0804745	SOX9	ENST00000394386.1|DUSP14|ENSG00000161326.8|dual specificity phosphatase 14
hg19_v2_chr5_+_137688285_137688429	0.0804016	SOX9	ENST00000314358.5|KDM3B|ENSG00000120733.9|lysine (K)-specific demethylase 3B
hg19_v2_chr1_-_204436344_204436474	0.0802002	SOX9	ENST00000367184.2|PIK3C2B|ENSG00000133056.9|phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
hg19_v2_chr8_+_61429416_61429502	0.0792057	SOX9	ENST00000262646.7|RAB2A|ENSG00000104388.10|RAB2A, member RAS oncogene family 	ENST00000531289.1|RAB2A|ENSG00000104388.10|RAB2A, member RAS oncogene family
hg19_v2_chr3_-_46904946_46904973	0.0786681	SOX9	ENST00000292327.4|MYL3|ENSG00000160808.5|myosin, light chain 3, alkali; ventricular, skeletal, slow
hg19_v2_chr21_+_34398153_34398250	0.0786311	SOX9	ENST00000382357.3|OLIG2|ENSG00000205927.4|oligodendrocyte lineage transcription factor 2 	ENST00000430860.1|OLIG2|ENSG00000205927.4|oligodendrocyte lineage transcription factor 2 	ENST00000333337.3|OLIG2|ENSG00000205927.4|oligodendrocyte lineage transcription factor 2
hg19_v2_chr13_+_98795505_98795522	0.0782982	SOX9	ENST00000319562.6|FARP1|ENSG00000152767.11|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v2_chr16_+_524850_524883	0.0775773	SOX9	ENST00000450428.1|RAB11FIP3|ENSG00000090565.11|RAB11 family interacting protein 3 (class II) 	ENST00000452814.1|RAB11FIP3|ENSG00000090565.11|RAB11 family interacting protein 3 (class II)
hg19_v2_chr3_+_85008089_85008189	0.0775309	SOX9	ENST00000383699.3|CADM2|ENSG00000175161.9|cell adhesion molecule 2
hg19_v2_chr1_-_197115818_197115829	0.0772142	SOX9	ENST00000367409.4|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 	ENST00000294732.7|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
hg19_v2_chr3_-_135913298_135913396	0.0771877	SOX9	ENST00000434835.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr2_-_65357225_65357267	0.0770901	SOX9	ENST00000398529.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409751.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000356214.7|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409892.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409784.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family
hg19_v2_chr17_+_26646121_26646133	0.0768673	SOX9	ENST00000226230.6|TMEM97|ENSG00000109084.9|transmembrane protein 97
hg19_v2_chr15_+_52311398_52311461	0.0764096	SOX9	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr15_-_52263937_52264003	0.0760894	SOX9	ENST00000315141.5|LEO1|ENSG00000166477.8|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 	ENST00000299601.5|LEO1|ENSG00000166477.8|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg19_v2_chr8_-_80993010_80993073	0.0760846	SOX9	ENST00000537855.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000520527.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000517427.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000448733.2|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000379097.3|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr4_+_175205038_175205094	0.075756	SOX9	ENST00000457424.2|CEP44|ENSG00000164118.8|centrosomal protein 44kDa 	ENST00000514712.1|CEP44|ENSG00000164118.8|centrosomal protein 44kDa
hg19_v2_chr5_-_39425068_39425098	0.0754062	SOX9	ENST00000515700.1|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 	ENST00000339788.6|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr1_+_14075903_14075940	0.0753797	SOX9	ENST00000343137.4|PRDM2|ENSG00000116731.18|PR domain containing 2, with ZNF domain 	ENST00000503842.1|PRDM2|ENSG00000116731.18|PR domain containing 2, with ZNF domain 	ENST00000407521.3|PRDM2|ENSG00000116731.18|PR domain containing 2, with ZNF domain 	ENST00000505823.1|PRDM2|ENSG00000116731.18|PR domain containing 2, with ZNF domain
hg19_v2_chr6_-_42713792_42713847	0.0752569	SOX9	ENST00000372876.1|TBCC|ENSG00000124659.5|tubulin folding cofactor C
hg19_v2_chr10_+_71812552_71812573	0.0733441	SOX9	ENST00000373255.4|H2AFY2|ENSG00000099284.9|H2A histone family, member Y2
hg19_v2_chr15_-_37392703_37392717	0.0732844	SOX9	ENST00000382766.2|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000444725.1|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr4_-_83351005_83351019	0.0716968	SOX9	ENST00000295470.5|HNRNPDL|ENSG00000152795.13|heterogeneous nuclear ribonucleoprotein D-like
hg19_v2_chr2_+_160568978_160569064	0.0711856	SOX9	ENST00000409175.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000539065.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000259050.4|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000421037.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
hg19_v2_chr19_+_58694742_58694863	0.0711441	SOX9	ENST00000597528.1|ZNF274|ENSG00000171606.13|zinc finger protein 274 	ENST00000594839.1|ZNF274|ENSG00000171606.13|zinc finger protein 274
hg19_v2_chr16_-_71918033_71918107	0.0710273	SOX9	ENST00000425432.1|ZNF821|ENSG00000102984.10|zinc finger protein 821 	ENST00000313565.6|ZNF821|ENSG00000102984.10|zinc finger protein 821 	ENST00000568666.1|ZNF821|ENSG00000102984.10|zinc finger protein 821 	ENST00000562797.1|ZNF821|ENSG00000102984.10|zinc finger protein 821 	ENST00000564134.1|ZNF821|ENSG00000102984.10|zinc finger protein 821
hg19_v2_chr5_+_74633036_74633085	0.0708147	SOX9	ENST00000343975.5|HMGCR|ENSG00000113161.11|3-hydroxy-3-methylglutaryl-CoA reductase
hg19_v2_chr7_-_16685422_16685448	0.0706906	SOX9	ENST00000306999.2|ANKMY2|ENSG00000106524.4|ankyrin repeat and MYND domain containing 2
hg19_v2_chr2_-_55277654_55277685	0.0701465	SOX9	ENST00000337526.6|RTN4|ENSG00000115310.13|reticulon 4 	ENST00000317610.7|RTN4|ENSG00000115310.13|reticulon 4 	ENST00000357732.4|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr17_+_36584662_36584730	0.0699858	SOX9	ENST00000431231.2|ARHGAP23|ENSG00000225485.3|Rho GTPase activating protein 23 	ENST00000437668.3|ARHGAP23|ENSG00000225485.3|Rho GTPase activating protein 23
hg19_v2_chr4_-_76598296_76598318	0.0693058	SOX9	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr9_+_71394945_71394988	0.0691158	SOX9	ENST00000394264.3|FAM122A|ENSG00000187866.6|family with sequence similarity 122A
hg19_v2_chr21_-_19191703_19191718	0.0678698	SOX9	ENST00000284881.4|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91 	ENST00000400559.3|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91 	ENST00000400558.3|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91
hg19_v2_chr7_+_23146271_23146285	0.0677177	SOX9	ENST00000545771.1|KLHL7|ENSG00000122550.13|kelch-like family member 7
hg19_v2_chr3_-_46904918_46904940	0.0671507	SOX9	ENST00000395869.1|MYL3|ENSG00000160808.5|myosin, light chain 3, alkali; ventricular, skeletal, slow
hg19_v2_chr1_-_205904950_205905037	0.0663657	SOX9	ENST00000340781.4|SLC26A9|ENSG00000174502.14|solute carrier family 26 (anion exchanger), member 9
hg19_v2_chr12_-_57882498_57882509	0.0662653	SOX9	ENST00000550288.1|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9
hg19_v2_chr14_-_91884115_91884127	0.0647854	SOX9	ENST00000389857.6|CCDC88C|ENSG00000015133.14|coiled-coil domain containing 88C
hg19_v2_chr20_+_37554955_37555067	0.0640376	SOX9	ENST00000217429.4|FAM83D|ENSG00000101447.9|family with sequence similarity 83, member D
hg19_v2_chr1_-_119530428_119530572	0.0639646	SOX9	ENST00000369429.3|TBX15|ENSG00000092607.9|T-box 15
hg19_v2_chr20_+_61147651_61147666	0.0637802	SOX9	ENST00000370527.3|C20orf166|ENSG00000174407.7|chromosome 20 open reading frame 166 	ENST00000370524.2|C20orf166|ENSG00000174407.7|chromosome 20 open reading frame 166
hg19_v2_chr4_-_5894777_5894799	0.0635407	SOX9	ENST00000324989.7|CRMP1|ENSG00000072832.10|collapsin response mediator protein 1
hg19_v2_chr2_+_27274506_27274549	0.0635168	SOX9	ENST00000451003.1|AGBL5|ENSG00000084693.11|ATP/GTP binding protein-like 5 	ENST00000323064.8|AGBL5|ENSG00000084693.11|ATP/GTP binding protein-like 5 	ENST00000360131.4|AGBL5|ENSG00000084693.11|ATP/GTP binding protein-like 5
hg19_v2_chr3_+_189507460_189507471	0.0632029	SOX9	ENST00000434928.1|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chrX_+_135579238_135579416	0.0622813	SOX9	ENST00000535601.1|HTATSF1|ENSG00000102241.7|HIV-1 Tat specific factor 1 	ENST00000448450.1|HTATSF1|ENSG00000102241.7|HIV-1 Tat specific factor 1 	ENST00000425695.1|HTATSF1|ENSG00000102241.7|HIV-1 Tat specific factor 1
hg19_v2_chr3_-_48470838_48470872	0.0620191	SOX9	ENST00000358459.4|PLXNB1|ENSG00000164050.8|plexin B1 	ENST00000358536.4|PLXNB1|ENSG00000164050.8|plexin B1
hg19_v2_chrX_-_24690771_24690794	0.061983	SOX9	ENST00000379145.1|PCYT1B|ENSG00000102230.9|phosphate cytidylyltransferase 1, choline, beta
hg19_v2_chr15_-_50411412_50411437	0.0612652	SOX9	ENST00000284509.6|ATP8B4|ENSG00000104043.10|ATPase, class I, type 8B, member 4
hg19_v2_chr10_+_70480963_70481010	0.0610505	SOX9	ENST00000265872.6|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000535016.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000538031.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543719.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000539539.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543225.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000536012.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000494903.2|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1
hg19_v2_chr9_-_5830768_5830787	0.0609749	SOX9	ENST00000381506.3|ERMP1|ENSG00000099219.9|endoplasmic reticulum metallopeptidase 1
hg19_v2_chr5_-_16936340_16936418	0.0607566	SOX9	ENST00000507288.1|MYO10|ENSG00000145555.10|myosin X 	ENST00000513610.1|MYO10|ENSG00000145555.10|myosin X
hg19_v2_chr22_+_50247449_50247515	0.0606304	SOX9	ENST00000216268.5|ZBED4|ENSG00000100426.6|zinc finger, BED-type containing 4
hg19_v2_chr1_-_31538517_31538632	0.0602568	SOX9	ENST00000440538.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000423018.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000424085.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000426105.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000257075.5|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373747.3|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000525843.1|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373742.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1
hg19_v2_chr11_+_120255997_120256048	0.0602041	SOX9	ENST00000532993.1|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr14_+_57857262_57857334	0.0598085	SOX9	ENST00000555166.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000556492.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000554703.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg19_v2_chr2_+_128180842_128180878	0.0597111	SOX9	ENST00000402125.2|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa)
hg19_v2_chr19_+_44100632_44100683	0.05766	SOX9	ENST00000533118.1|ZNF576|ENSG00000124444.11|zinc finger protein 576
hg19_v2_chr1_-_26231589_26231635	0.0575469	SOX9	ENST00000374291.1|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr12_-_95611149_95611249	0.0575277	SOX9	ENST00000549499.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000343958.4|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000546711.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6
hg19_v2_chr14_-_91884150_91884234	0.0565265	SOX9	ENST00000553403.1|CCDC88C|ENSG00000015133.14|coiled-coil domain containing 88C
hg19_v2_chr6_+_37787458_37787587	0.0562874	SOX9	ENST00000373391.2|ZFAND3|ENSG00000156639.7|zinc finger, AN1-type domain 3
hg19_v2_chr1_+_180897269_180897295	0.0561956	SOX9	ENST00000367587.1|KIAA1614|ENSG00000135835.6|KIAA1614
hg19_v2_chr1_+_62417957_62417993	0.0549784	SOX9	ENST00000307297.7|INADL|ENSG00000132849.14|InaD-like (Drosophila) 	ENST00000543708.1|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr14_+_39644387_39644417	0.0546966	SOX9	ENST00000553331.1|PNN|ENSG00000100941.4|pinin, desmosome associated protein 	ENST00000216832.4|PNN|ENSG00000100941.4|pinin, desmosome associated protein
hg19_v2_chr1_-_156828810_156828914	0.0546537	SOX9	ENST00000368195.3|INSRR|ENSG00000027644.4|insulin receptor-related receptor
hg19_v2_chr5_+_159848807_159848847	0.0545041	SOX9	ENST00000352433.5|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1
hg19_v2_chr3_-_149688655_149688737	0.0538406	SOX9	ENST00000461930.1|PFN2|ENSG00000070087.9|profilin 2 	ENST00000423691.2|PFN2|ENSG00000070087.9|profilin 2 	ENST00000490975.1|PFN2|ENSG00000070087.9|profilin 2 	ENST00000461868.1|PFN2|ENSG00000070087.9|profilin 2 	ENST00000452853.2|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr20_-_35492048_35492118	0.0538009	SOX9	ENST00000237536.4|SOGA1|ENSG00000149639.10|suppressor of glucose, autophagy associated 1
hg19_v2_chr22_-_38480100_38480159	0.0536836	SOX9	ENST00000427592.1|SLC16A8|ENSG00000100156.6|solute carrier family 16 (monocarboxylate transporter), member 8
hg19_v2_chr9_-_74979420_74979580	0.0536517	SOX9	ENST00000343431.2|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000376956.3|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5
hg19_v2_chr1_+_33116743_33116754	0.0535385	SOX9	ENST00000414241.3|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000373493.5|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4
hg19_v2_chr9_+_103235365_103235419	0.0535206	SOX9	ENST00000374879.4|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr11_-_5276008_5276041	0.0534367	SOX9	ENST00000336906.4|HBG2|ENSG00000196565.8|hemoglobin, gamma G
hg19_v2_chr11_+_1411503_1411521	0.0530653	SOX9	ENST00000526678.1|BRSK2|ENSG00000174672.11|BR serine/threonine kinase 2
hg19_v2_chr5_-_39425290_39425336	0.05283	SOX9	ENST00000545653.1|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chrX_-_73512358_73512402	0.0526887	SOX9	ENST00000602776.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding)
hg19_v2_chr4_-_83350580_83350600	0.0524832	SOX9	ENST00000349655.4|HNRNPDL|ENSG00000152795.13|heterogeneous nuclear ribonucleoprotein D-like 	ENST00000602300.1|HNRNPDL|ENSG00000152795.13|heterogeneous nuclear ribonucleoprotein D-like
hg19_v2_chr19_+_17579556_17579583	0.0522117	SOX9	ENST00000442725.1|SLC27A1|ENSG00000130304.12|solute carrier family 27 (fatty acid transporter), member 1
hg19_v2_chr1_+_244998602_244998646	0.0518805	SOX9	ENST00000411948.2|COX20|ENSG00000203667.5|COX20 cytochrome C oxidase assembly factor
hg19_v2_chr5_+_60240943_60241011	0.0517342	SOX9	ENST00000296597.5|NDUFAF2|ENSG00000164182.6|NADH dehydrogenase (ubiquinone) complex I, assembly factor 2
hg19_v2_chr15_-_34659349_34659479	0.0516402	SOX9	ENST00000314891.6|LPCAT4|ENSG00000176454.9|lysophosphatidylcholine acyltransferase 4
hg19_v2_chr15_+_89164520_89164559	0.0510507	SOX9	ENST00000332810.3|AEN|ENSG00000181026.13|apoptosis enhancing nuclease
hg19_v2_chr17_+_74722912_74722956	0.050694	SOX9	ENST00000589977.1|METTL23|ENSG00000181038.9|methyltransferase like 23 	ENST00000591571.1|METTL23|ENSG00000181038.9|methyltransferase like 23 	ENST00000592849.1|METTL23|ENSG00000181038.9|methyltransferase like 23 	ENST00000586738.1|METTL23|ENSG00000181038.9|methyltransferase like 23 	ENST00000588783.1|METTL23|ENSG00000181038.9|methyltransferase like 23 	ENST00000588563.1|METTL23|ENSG00000181038.9|methyltransferase like 23 	ENST00000586752.1|METTL23|ENSG00000181038.9|methyltransferase like 23 	ENST00000588302.1|METTL23|ENSG00000181038.9|methyltransferase like 23 	ENST00000590964.1|METTL23|ENSG00000181038.9|methyltransferase like 23 	ENST00000341249.6|METTL23|ENSG00000181038.9|methyltransferase like 23 	ENST00000588822.1|METTL23|ENSG00000181038.9|methyltransferase like 23
hg19_v2_chr2_+_10262857_10262873	0.0501925	SOX9	ENST00000304567.5|RRM2|ENSG00000171848.9|ribonucleotide reductase M2
hg19_v2_chr18_-_34409116_34409158	0.0501821	SOX9	ENST00000334295.4|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2
hg19_v2_chr4_-_140544386_140544413	0.0500457	SOX9	ENST00000561977.1|RP11-308D13.3|ENSG00000261268.1|RP11-308D13.3
hg19_v2_chr14_+_52456193_52456320	0.0499645	SOX9	ENST00000261700.3|C14orf166|ENSG00000087302.4|chromosome 14 open reading frame 166
hg19_v2_chr3_-_88108192_88108203	0.0497291	SOX9	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr10_-_105845536_105845581	0.0497238	SOX9	ENST00000393211.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chr1_+_64239657_64239724	0.0496493	SOX9	ENST00000371080.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1 	ENST00000371079.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1
hg19_v2_chr22_-_30970560_30970577	0.04951	SOX9	ENST00000402369.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1 	ENST00000406361.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1
hg19_v2_chrX_+_70443050_70443061	0.0495099	SOX9	ENST00000361726.6|GJB1|ENSG00000169562.9|gap junction protein, beta 1, 32kDa
hg19_v2_chrX_-_135962923_135962943	0.0494919	SOX9	ENST00000565438.1|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked
hg19_v2_chr9_-_127905736_127905815	0.049247	SOX9	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr16_+_22524844_22525003	0.0487244	SOX9	ENST00000538606.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5 	ENST00000424340.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5 	ENST00000517539.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5 	ENST00000528249.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr1_+_93645314_93645476	0.0487193	SOX9	ENST00000343253.7|CCDC18|ENSG00000122483.13|coiled-coil domain containing 18
hg19_v2_chr7_+_2671663_2671790	0.0482892	SOX9	ENST00000407643.1|TTYH3|ENSG00000136295.10|tweety family member 3
hg19_v2_chr13_+_24553933_24553949	0.0476164	SOX9	ENST00000424834.2|SPATA13|ENSG00000182957.11|spermatogenesis associated 13 	ENST00000439928.2|RP11-309I15.1|ENSG00000228741.2|RP11-309I15.1
hg19_v2_chr7_+_139528952_139529038	0.0474913	SOX9	ENST00000416849.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000436047.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000414508.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000448866.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr11_+_67159416_67159492	0.0474651	SOX9	ENST00000307980.2|RAD9A|ENSG00000172613.3|RAD9 homolog A (S. pombe) 	ENST00000544620.1|RAD9A|ENSG00000172613.3|RAD9 homolog A (S. pombe)
hg19_v2_chr12_-_95945246_95945270	0.0466979	SOX9	ENST00000258499.3|USP44|ENSG00000136014.7|ubiquitin specific peptidase 44
hg19_v2_chr7_+_120591170_120591244	0.0465512	SOX9	ENST00000431467.1|ING3|ENSG00000071243.11|inhibitor of growth family, member 3
hg19_v2_chr2_+_27070964_27071027	0.0462629	SOX9	ENST00000288699.6|DPYSL5|ENSG00000157851.12|dihydropyrimidinase-like 5
hg19_v2_chr9_-_139965000_139965040	0.0461763	SOX9	ENST00000409687.3|SAPCD2|ENSG00000186193.7|suppressor APC domain containing 2
hg19_v2_chr11_+_111808119_111808151	0.0461203	SOX9	ENST00000531396.1|DIXDC1|ENSG00000150764.9|DIX domain containing 1
hg19_v2_chrX_-_130037198_130037234	0.0459991	SOX9	ENST00000370935.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000338144.3|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000394363.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2
hg19_v2_chr7_-_16921601_16921614	0.0447223	SOX9	ENST00000402239.3|AGR3|ENSG00000173467.4|anterior gradient 3 	ENST00000310398.2|AGR3|ENSG00000173467.4|anterior gradient 3 	ENST00000414935.1|AGR3|ENSG00000173467.4|anterior gradient 3
hg19_v2_chr1_-_182360498_182360541	0.0446	SOX9	ENST00000417584.2|GLUL|ENSG00000135821.12|glutamate-ammonia ligase
hg19_v2_chr1_+_6640046_6640101	0.0439125	SOX9	ENST00000319084.5|ZBTB48|ENSG00000204859.7|zinc finger and BTB domain containing 48 	ENST00000435905.1|ZBTB48|ENSG00000204859.7|zinc finger and BTB domain containing 48
hg19_v2_chr6_+_21666633_21666681	0.0438447	SOX9	ENST00000606851.1|CASC15|ENSG00000272168.1|cancer susceptibility candidate 15 (non-protein coding)
hg19_v2_chr5_+_74632993_74633028	0.0433245	SOX9	ENST00000287936.4|HMGCR|ENSG00000113161.11|3-hydroxy-3-methylglutaryl-CoA reductase
hg19_v2_chrX_+_135579670_135579715	0.0427465	SOX9	ENST00000218364.4|HTATSF1|ENSG00000102241.7|HIV-1 Tat specific factor 1
hg19_v2_chr5_+_138678131_138678169	0.0419318	SOX9	ENST00000394795.2|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000510080.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr14_+_91580732_91580746	0.0419288	SOX9	ENST00000519019.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000523816.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000517518.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr6_-_11232891_11232915	0.0415116	SOX9	ENST00000379433.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000379446.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9
hg19_v2_chr13_-_41593425_41593480	0.041471	SOX9	ENST00000239882.3|ELF1|ENSG00000120690.9|E74-like factor 1 (ets domain transcription factor)
hg19_v2_chr5_+_159848854_159848917	0.0411958	SOX9	ENST00000517480.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1 	ENST00000520452.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1 	ENST00000393964.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1
hg19_v2_chr2_-_55277436_55277464	0.0406656	SOX9	ENST00000354474.6|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr11_-_94965667_94965705	0.0405981	SOX9	ENST00000542176.1|SESN3|ENSG00000149212.6|sestrin 3 	ENST00000278499.2|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr1_-_1243252_1243318	0.040465	SOX9	ENST00000353662.3|ACAP3|ENSG00000131584.14|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
hg19_v2_chr20_-_34330129_34330234	0.0404441	SOX9	ENST00000397370.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000528062.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000407261.4|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000374038.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000361162.6|RBM39|ENSG00000131051.16|RNA binding motif protein 39
hg19_v2_chr5_+_140213815_140213969	0.0399001	SOX9	ENST00000525929.1|PCDHA7|ENSG00000204963.4|protocadherin alpha 7 	ENST00000378125.3|PCDHA7|ENSG00000204963.4|protocadherin alpha 7
hg19_v2_chr11_+_117103333_117103419	0.039767	SOX9	ENST00000534428.1|RNF214|ENSG00000167257.6|ring finger protein 214
hg19_v2_chr16_+_88636789_88636827	0.039481	SOX9	ENST00000301011.5|ZC3H18|ENSG00000158545.11|zinc finger CCCH-type containing 18 	ENST00000452588.2|ZC3H18|ENSG00000158545.11|zinc finger CCCH-type containing 18
hg19_v2_chr7_+_5632436_5632454	0.0394561	SOX9	ENST00000340250.6|FSCN1|ENSG00000075618.13|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus) 	ENST00000382361.3|FSCN1|ENSG00000075618.13|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v2_chr15_-_67439270_67439312	0.0392582	SOX9	ENST00000558463.1|RP11-342M21.2|ENSG00000259202.1|Uncharacterized protein
hg19_v2_chr3_+_9439579_9439592	0.0391368	SOX9	ENST00000406341.1|SETD5|ENSG00000168137.11|SET domain containing 5
hg19_v2_chr2_-_204399976_204400011	0.038787	SOX9	ENST00000457812.1|RAPH1|ENSG00000173166.13|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
hg19_v2_chr1_-_151431674_151431691	0.0384675	SOX9	ENST00000531094.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain
hg19_v2_chr4_+_71570430_71570536	0.0383707	SOX9	ENST00000417478.2|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr9_-_130517309_130517388	0.038225	SOX9	ENST00000414380.1|SH2D3C|ENSG00000095370.15|SH2 domain containing 3C
hg19_v2_chr14_+_52456327_52456344	0.0377036	SOX9	ENST00000556760.1|C14orf166|ENSG00000087302.4|chromosome 14 open reading frame 166
hg19_v2_chrX_-_2418634_2418691	0.0364307	SOX9	ENST00000444280.1|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked
hg19_v2_chr8_+_26435359_26435426	0.0361637	SOX9	ENST00000311151.5|DPYSL2|ENSG00000092964.12|dihydropyrimidinase-like 2
hg19_v2_chr12_+_70760056_70760085	0.0361523	SOX9	ENST00000258111.4|KCNMB4|ENSG00000135643.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg19_v2_chr8_+_104831440_104831453	0.0359525	SOX9	ENST00000515551.1|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2
hg19_v2_chr1_+_156119466_156119514	0.0354496	SOX9	ENST00000414683.1|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
hg19_v2_chr5_-_39424961_39424980	0.0353008	SOX9	ENST00000503513.1|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr9_+_15422702_15422883	0.035223	SOX9	ENST00000380821.3|SNAPC3|ENSG00000164975.11|small nuclear RNA activating complex, polypeptide 3, 50kDa 	ENST00000421710.1|SNAPC3|ENSG00000164975.11|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v2_chr15_+_41136734_41136873	0.0351661	SOX9	ENST00000568580.1|SPINT1|ENSG00000166145.10|serine peptidase inhibitor, Kunitz type 1
hg19_v2_chr8_+_133787586_133787673	0.0350616	SOX9	ENST00000395379.1|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000395386.2|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000337920.4|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1
hg19_v2_chr1_+_26737292_26737322	0.0350336	SOX9	ENST00000254231.4|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr12_+_49761147_49761167	0.0349948	SOX9	ENST00000549298.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr20_+_34679725_34679774	0.0348207	SOX9	ENST00000432589.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr18_+_55102917_55102985	0.0344914	SOX9	ENST00000491143.2|ONECUT2|ENSG00000119547.5|one cut homeobox 2
hg19_v2_chr16_-_30798492_30798535	0.0344793	SOX9	ENST00000262525.4|ZNF629|ENSG00000102870.4|zinc finger protein 629
hg19_v2_chr3_+_9439400_9439414	0.0344304	SOX9	ENST00000450326.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402198.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402466.1|SETD5|ENSG00000168137.11|SET domain containing 5
hg19_v2_chr19_+_18208603_18208614	0.0340467	SOX9	ENST00000262811.6|MAST3|ENSG00000099308.6|microtubule associated serine/threonine kinase 3
hg19_v2_chr6_+_56911476_56911524	0.0340436	SOX9	ENST00000545356.1|KIAA1586|ENSG00000168116.9|KIAA1586
hg19_v2_chr12_+_64238539_64238600	0.0339433	SOX9	ENST00000357825.3|SRGAP1|ENSG00000196935.4|SLIT-ROBO Rho GTPase activating protein 1
hg19_v2_chr6_-_27100529_27100582	0.0330781	SOX9	ENST00000607124.1|HIST1H2BJ|ENSG00000124635.7|histone cluster 1, H2bj 	ENST00000339812.2|HIST1H2BJ|ENSG00000124635.7|histone cluster 1, H2bj 	ENST00000541790.1|HIST1H2BJ|ENSG00000124635.7|histone cluster 1, H2bj
hg19_v2_chr1_+_11751748_11751798	0.0330347	SOX9	ENST00000294485.5|DRAXIN|ENSG00000162490.6|dorsal inhibitory axon guidance protein
hg19_v2_chr19_-_44439387_44439419	0.0326672	SOX9	ENST00000269973.5|ZNF45|ENSG00000124459.7|zinc finger protein 45
hg19_v2_chr6_+_41040678_41040722	0.0326662	SOX9	ENST00000341376.6|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha 	ENST00000353205.5|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha
hg19_v2_chr14_-_53019211_53019269	0.0326063	SOX9	ENST00000557374.1|TXNDC16|ENSG00000087301.4|thioredoxin domain containing 16 	ENST00000281741.4|TXNDC16|ENSG00000087301.4|thioredoxin domain containing 16
hg19_v2_chr11_-_79151695_79151710	0.032437	SOX9	ENST00000278550.7|TENM4|ENSG00000149256.10|teneurin transmembrane protein 4
hg19_v2_chr20_-_40247002_40247075	0.0306687	SOX9	ENST00000373222.3|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6
hg19_v2_chr6_+_30594619_30594665	0.02993	SOX9	ENST00000318999.7|ATAT1|ENSG00000137343.13|alpha tubulin acetyltransferase 1 	ENST00000376485.4|ATAT1|ENSG00000137343.13|alpha tubulin acetyltransferase 1 	ENST00000376478.2|ATAT1|ENSG00000137343.13|alpha tubulin acetyltransferase 1 	ENST00000319027.5|ATAT1|ENSG00000137343.13|alpha tubulin acetyltransferase 1 	ENST00000376483.4|ATAT1|ENSG00000137343.13|alpha tubulin acetyltransferase 1 	ENST00000329992.8|ATAT1|ENSG00000137343.13|alpha tubulin acetyltransferase 1 	ENST00000330083.5|ATAT1|ENSG00000137343.13|alpha tubulin acetyltransferase 1
hg19_v2_chr6_+_56954867_56954882	0.0298655	SOX9	ENST00000370708.4|ZNF451|ENSG00000112200.12|zinc finger protein 451 	ENST00000370702.1|ZNF451|ENSG00000112200.12|zinc finger protein 451
hg19_v2_chr15_-_52944231_52944268	0.0298651	SOX9	ENST00000546305.2|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A
hg19_v2_chr5_+_178986693_178986820	0.0290177	SOX9	ENST00000437570.2|RUFY1|ENSG00000176783.10|RUN and FYVE domain containing 1 	ENST00000393438.2|RUFY1|ENSG00000176783.10|RUN and FYVE domain containing 1
hg19_v2_chr7_-_27219632_27219660	0.0287709	SOX9	ENST00000470747.4|RP1-170O19.20|ENSG00000257184.2|Uncharacterized protein
hg19_v2_chrX_-_117107542_117107677	0.0287585	SOX9	ENST00000371878.1|KLHL13|ENSG00000003096.9|kelch-like family member 13
hg19_v2_chr5_+_137673200_137673271	0.0287575	SOX9	ENST00000434981.2|FAM53C|ENSG00000120709.6|family with sequence similarity 53, member C
hg19_v2_chr16_+_27078219_27078229	0.0286582	SOX9	ENST00000418886.1|C16orf82|ENSG00000234186.2|chromosome 16 open reading frame 82
hg19_v2_chr1_-_160040038_160040064	0.0285948	SOX9	ENST00000368089.3|KCNJ10|ENSG00000177807.6|potassium inwardly-rectifying channel, subfamily J, member 10
hg19_v2_chr1_+_156119798_156119834	0.0285082	SOX9	ENST00000355014.2|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
hg19_v2_chr2_+_74425689_74425749	0.0280583	SOX9	ENST00000394053.2|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000409804.1|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000264090.4|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000394050.3|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000409601.1|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
hg19_v2_chr6_-_105850937_105850983	0.0279718	SOX9	ENST00000369110.3|PREP|ENSG00000085377.9|prolyl endopeptidase
hg19_v2_chr3_+_189507523_189507590	0.027684	SOX9	ENST00000437221.1|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000392463.2|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000392461.3|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000449992.1|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000456148.1|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr7_+_2671568_2671606	0.0274843	SOX9	ENST00000258796.7|TTYH3|ENSG00000136295.10|tweety family member 3
hg19_v2_chr10_-_129924611_129924662	0.0274626	SOX9	ENST00000368654.3|MKI67|ENSG00000148773.8|marker of proliferation Ki-67
hg19_v2_chr11_+_34654011_34654118	0.0273694	SOX9	ENST00000531794.1|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr7_+_28452130_28452154	0.027289	SOX9	ENST00000357727.2|CREB5|ENSG00000146592.12|cAMP responsive element binding protein 5
hg19_v2_chr9_-_140196703_140196744	0.0271827	SOX9	ENST00000356628.2|NRARP|ENSG00000198435.2|NOTCH-regulated ankyrin repeat protein
hg19_v2_chr22_-_32022280_32022297	0.0270225	SOX9	ENST00000442379.1|PISD|ENSG00000241878.5|phosphatidylserine decarboxylase
hg19_v2_chr20_-_39317868_39317884	0.0269982	SOX9	ENST00000373313.2|MAFB|ENSG00000204103.2|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
hg19_v2_chr11_-_67141090_67141208	0.0265387	SOX9	ENST00000312438.7|CLCF1|ENSG00000175505.9|cardiotrophin-like cytokine factor 1
hg19_v2_chr6_+_37787262_37787291	0.0256083	SOX9	ENST00000287218.4|ZFAND3|ENSG00000156639.7|zinc finger, AN1-type domain 3
hg19_v2_chr22_+_43808014_43808029	0.0251386	SOX9	ENST00000334209.5|MPPED1|ENSG00000186732.9|metallophosphoesterase domain containing 1 	ENST00000443721.1|MPPED1|ENSG00000186732.9|metallophosphoesterase domain containing 1 	ENST00000414469.2|MPPED1|ENSG00000186732.9|metallophosphoesterase domain containing 1 	ENST00000439548.1|MPPED1|ENSG00000186732.9|metallophosphoesterase domain containing 1
hg19_v2_chr12_-_99548270_99548295	0.024958	SOX9	ENST00000546568.1|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000332712.7|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000546960.1|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v2_chr8_-_82373809_82373815	0.024573	SOX9	ENST00000379071.2|FABP9|ENSG00000205186.2|fatty acid binding protein 9, testis
hg19_v2_chr11_-_6677018_6677085	0.0245466	SOX9	ENST00000299441.3|DCHS1|ENSG00000166341.6|dachsous cadherin-related 1
hg19_v2_chr18_+_34409069_34409203	0.0244003	SOX9	ENST00000543923.1|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000280020.5|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000435985.2|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000592521.1|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000587139.1|KIAA1328|ENSG00000150477.10|KIAA1328
hg19_v2_chr10_+_73724123_73724206	0.0243692	SOX9	ENST00000373115.4|CHST3|ENSG00000122863.5|carbohydrate (chondroitin 6) sulfotransferase 3
hg19_v2_chr16_+_89989687_89989774	0.0236611	SOX9	ENST00000315491.7|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000555576.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000554336.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000553967.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain
hg19_v2_chr1_+_160370344_160370406	0.0235074	SOX9	ENST00000368061.2|VANGL2|ENSG00000162738.5|VANGL planar cell polarity protein 2
hg19_v2_chr1_-_50889155_50889173	0.0234337	SOX9	ENST00000404795.3|DMRTA2|ENSG00000142700.7|DMRT-like family A2
hg19_v2_chr11_-_35440579_35440617	0.0231715	SOX9	ENST00000606205.1|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr1_-_40367530_40367597	0.0229075	SOX9	ENST00000372816.2|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog 	ENST00000372815.1|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
hg19_v2_chr16_+_524900_524933	0.0228737	SOX9	ENST00000449879.1|RAB11FIP3|ENSG00000090565.11|RAB11 family interacting protein 3 (class II)
hg19_v2_chr16_+_2083265_2083303	0.0223738	SOX9	ENST00000565855.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 	ENST00000566198.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
hg19_v2_chr5_+_86563636_86563712	0.0223633	SOX9	ENST00000274376.6|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1
hg19_v2_chr14_-_88459503_88459615	0.0218358	SOX9	ENST00000393568.4|GALC|ENSG00000054983.12|galactosylceramidase 	ENST00000261304.2|GALC|ENSG00000054983.12|galactosylceramidase
hg19_v2_chr12_+_54674482_54674564	0.021783	SOX9	ENST00000547708.1|HNRNPA1|ENSG00000135486.13|heterogeneous nuclear ribonucleoprotein A1 	ENST00000340913.6|HNRNPA1|ENSG00000135486.13|heterogeneous nuclear ribonucleoprotein A1 	ENST00000551702.1|HNRNPA1|ENSG00000135486.13|heterogeneous nuclear ribonucleoprotein A1 	ENST00000330752.8|HNRNPA1|ENSG00000135486.13|heterogeneous nuclear ribonucleoprotein A1 	ENST00000547276.1|HNRNPA1|ENSG00000135486.13|heterogeneous nuclear ribonucleoprotein A1
hg19_v2_chr1_+_196743912_196743925	0.0217332	SOX9	ENST00000367425.4|CFHR3|ENSG00000116785.9|complement factor H-related 3
hg19_v2_chr1_-_176176629_176176659	0.0216229	SOX9	ENST00000367669.3|RFWD2|ENSG00000143207.15|ring finger and WD repeat domain 2, E3 ubiquitin protein ligase
hg19_v2_chr1_+_25071848_25071944	0.0213716	SOX9	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chr3_+_35680339_35680437	0.0211132	SOX9	ENST00000450234.1|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa
hg19_v2_chr1_-_65533390_65533443	0.0208486	SOX9	ENST00000448344.1|RP4-535B20.1|ENSG00000231485.1|RP4-535B20.1
hg19_v2_chr1_-_32801825_32801980	0.0207815	SOX9	ENST00000329421.7|MARCKSL1|ENSG00000175130.6|MARCKS-like 1
hg19_v2_chr11_-_111649074_111649123	0.0207454	SOX9	ENST00000534218.1|RP11-108O10.2|ENSG00000254990.1|RP11-108O10.2
hg19_v2_chr10_+_104678102_104678119	0.0204175	SOX9	ENST00000433628.2|CNNM2|ENSG00000148842.13|cyclin M2
hg19_v2_chr10_+_102759045_102759233	0.0204141	SOX9	ENST00000370220.1|LZTS2|ENSG00000107816.13|leucine zipper, putative tumor suppressor 2
hg19_v2_chr1_+_150039369_150039444	0.0202701	SOX9	ENST00000369130.3|VPS45|ENSG00000136631.8|vacuolar protein sorting 45 homolog (S. cerevisiae) 	ENST00000369128.5|VPS45|ENSG00000136631.8|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v2_chr5_-_175965008_175965026	0.0202463	SOX9	ENST00000537487.1|RNF44|ENSG00000146083.7|ring finger protein 44
hg19_v2_chr2_-_50201327_50201341	0.0199995	SOX9	ENST00000412315.1|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chr3_+_89156799_89156831	0.0198686	SOX9	ENST00000452448.2|EPHA3|ENSG00000044524.6|EPH receptor A3 	ENST00000494014.1|EPHA3|ENSG00000044524.6|EPH receptor A3
hg19_v2_chr9_+_108463234_108463265	0.0197934	SOX9	ENST00000374688.1|TMEM38B|ENSG00000095209.7|transmembrane protein 38B
hg19_v2_chr7_-_131241361_131241398	0.0196416	SOX9	ENST00000378555.3|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000322985.9|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000541194.1|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000537928.1|PODXL|ENSG00000128567.12|podocalyxin-like
hg19_v2_chr12_-_49075941_49076001	0.019617	SOX9	ENST00000553086.1|KANSL2|ENSG00000139620.8|KAT8 regulatory NSL complex subunit 2 	ENST00000548304.1|KANSL2|ENSG00000139620.8|KAT8 regulatory NSL complex subunit 2
hg19_v2_chr4_+_175204865_175204915	0.0195829	SOX9	ENST00000505124.1|CEP44|ENSG00000164118.8|centrosomal protein 44kDa
hg19_v2_chrX_-_85302531_85302570	0.0194837	SOX9	ENST00000537751.1|CHM|ENSG00000188419.9|choroideremia (Rab escort protein 1) 	ENST00000358786.4|CHM|ENSG00000188419.9|choroideremia (Rab escort protein 1) 	ENST00000357749.2|CHM|ENSG00000188419.9|choroideremia (Rab escort protein 1)
hg19_v2_chr21_+_17442799_17442853	0.0191081	SOX9	ENST00000602580.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000458468.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000602935.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr4_+_78078304_78078406	0.0190684	SOX9	ENST00000316355.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000354403.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000502280.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr4_+_78079450_78079563	0.0188883	SOX9	ENST00000395640.1|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000512918.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr5_+_140739537_140739703	0.0188721	SOX9	ENST00000522605.1|PCDHGB2|ENSG00000253910.1|protocadherin gamma subfamily B, 2
hg19_v2_chr5_+_69321074_69321200	0.018867	SOX9	ENST00000380751.5|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000380750.3|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000503931.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000506542.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric)
hg19_v2_chr4_+_41614909_41614926	0.0186582	SOX9	ENST00000509454.1|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1 	ENST00000396595.3|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1 	ENST00000381753.4|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1
hg19_v2_chr11_+_68080077_68080127	0.0183353	SOX9	ENST00000294304.7|LRP5|ENSG00000162337.7|low density lipoprotein receptor-related protein 5
hg19_v2_chr11_-_67141640_67141651	0.0183312	SOX9	ENST00000533438.1|CLCF1|ENSG00000175505.9|cardiotrophin-like cytokine factor 1
hg19_v2_chr10_+_91461413_91461436	0.0181222	SOX9	ENST00000447580.1|KIF20B|ENSG00000138182.10|kinesin family member 20B
hg19_v2_chr1_-_17766198_17766232	0.0180615	SOX9	ENST00000375436.4|RCC2|ENSG00000179051.9|regulator of chromosome condensation 2
hg19_v2_chr1_-_205912577_205912593	0.0178969	SOX9	ENST00000367135.3|SLC26A9|ENSG00000174502.14|solute carrier family 26 (anion exchanger), member 9 	ENST00000367134.2|SLC26A9|ENSG00000174502.14|solute carrier family 26 (anion exchanger), member 9
hg19_v2_chr10_+_71812577_71812644	0.0176358	SOX9	ENST00000455786.1|H2AFY2|ENSG00000099284.9|H2A histone family, member Y2
hg19_v2_chr19_-_17375527_17375538	0.0175516	SOX9	ENST00000431146.2|USHBP1|ENSG00000130307.7|Usher syndrome 1C binding protein 1 	ENST00000594190.1|USHBP1|ENSG00000130307.7|Usher syndrome 1C binding protein 1
hg19_v2_chr10_-_81205373_81205429	0.0175419	SOX9	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chr6_-_75915757_75915775	0.0168618	SOX9	ENST00000322507.8|COL12A1|ENSG00000111799.16|collagen, type XII, alpha 1
hg19_v2_chr19_+_44100727_44100804	0.0167895	SOX9	ENST00000528387.1|ZNF576|ENSG00000124444.11|zinc finger protein 576 	ENST00000529930.1|ZNF576|ENSG00000124444.11|zinc finger protein 576 	ENST00000336564.4|ZNF576|ENSG00000124444.11|zinc finger protein 576 	ENST00000607544.1|SRRM5|ENSG00000226763.3|serine/arginine repetitive matrix 5 	ENST00000526798.1|SRRM5|ENSG00000226763.3|serine/arginine repetitive matrix 5
hg19_v2_chr17_+_18128896_18128983	0.0163322	SOX9	ENST00000316843.4|LLGL1|ENSG00000131899.6|lethal giant larvae homolog 1 (Drosophila)
hg19_v2_chr11_+_1860200_1860219	0.0162372	SOX9	ENST00000381911.1|TNNI2|ENSG00000130598.11|troponin I type 2 (skeletal, fast)
hg19_v2_chr16_-_15474904_15474904	0.0161414	SOX9	ENST00000534094.1|NPIPA5|ENSG00000183793.9|nuclear pore complex interacting protein family, member A5
hg19_v2_chr14_-_103589246_103589397	0.0159814	SOX9	ENST00000558224.1|LINC00677|ENSG00000259717.1|long intergenic non-protein coding RNA 677 	ENST00000560742.1|LINC00677|ENSG00000259717.1|long intergenic non-protein coding RNA 677
hg19_v2_chr12_-_8815299_8815331	0.0154731	SOX9	ENST00000535336.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr6_-_27114577_27114642	0.0151579	SOX9	ENST00000356950.1|HIST1H2BK|ENSG00000197903.6|histone cluster 1, H2bk 	ENST00000396891.4|HIST1H2BK|ENSG00000197903.6|histone cluster 1, H2bk
hg19_v2_chr3_+_69985734_69985754	0.0151474	SOX9	ENST00000314557.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000394351.3|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr17_+_46970127_46970132	0.0150541	SOX9	ENST00000355938.5|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr12_+_93096619_93096750	0.0149031	SOX9	ENST00000397833.3|C12orf74|ENSG00000214215.3|chromosome 12 open reading frame 74
hg19_v2_chr16_+_66400533_66400545	0.0145371	SOX9	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr13_+_113656092_113656207	0.0141952	SOX9	ENST00000397024.1|MCF2L|ENSG00000126217.16|MCF.2 cell line derived transforming sequence-like
hg19_v2_chr11_-_69519410_69519410	0.0141642	SOX9	ENST00000294312.3|FGF19|ENSG00000162344.3|fibroblast growth factor 19
hg19_v2_chr12_-_54673871_54673925	0.0140267	SOX9	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr11_+_13299186_13299432	0.0138955	SOX9	ENST00000527998.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000396441.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000533520.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529825.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389707.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000401424.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529388.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000530357.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403290.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000361003.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389708.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403510.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000482049.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like
hg19_v2_chr3_+_49058444_49058618	0.0136687	SOX9	ENST00000326925.6|NDUFAF3|ENSG00000178057.10|NADH dehydrogenase (ubiquinone) complex I, assembly factor 3 	ENST00000395458.2|NDUFAF3|ENSG00000178057.10|NADH dehydrogenase (ubiquinone) complex I, assembly factor 3
hg19_v2_chr14_-_73493784_73493822	0.0136598	SOX9	ENST00000553891.1|ZFYVE1|ENSG00000165861.9|zinc finger, FYVE domain containing 1
hg19_v2_chr12_-_57882577_57882614	0.0136481	SOX9	ENST00000393797.2|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9
hg19_v2_chr3_-_48754599_48754711	0.0134874	SOX9	ENST00000413654.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000454335.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000440424.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000449610.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000443964.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000417896.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000413298.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000449563.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000443853.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000437427.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000446860.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000412850.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000424035.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000340879.4|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000431721.2|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000434860.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000328631.5|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000432678.2|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2
hg19_v2_chr12_-_10251539_10251560	0.0133624	SOX9	ENST00000420265.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr13_-_27334879_27334930	0.0133601	SOX9	ENST00000405846.3|GPR12|ENSG00000132975.6|G protein-coupled receptor 12
hg19_v2_chr17_+_26646175_26646295	0.0132144	SOX9	ENST00000583381.1|TMEM97|ENSG00000109084.9|transmembrane protein 97 	ENST00000582113.1|TMEM97|ENSG00000109084.9|transmembrane protein 97 	ENST00000582384.1|TMEM97|ENSG00000109084.9|transmembrane protein 97
hg19_v2_chr19_+_8455077_8455083	0.0131864	SOX9	ENST00000328024.6|RAB11B|ENSG00000185236.7|RAB11B, member RAS oncogene family
hg19_v2_chr12_+_93096759_93096804	0.0131537	SOX9	ENST00000544406.2|C12orf74|ENSG00000214215.3|chromosome 12 open reading frame 74
hg19_v2_chr9_+_139221880_139221932	0.013152	SOX9	ENST00000392945.3|GPSM1|ENSG00000160360.7|G-protein signaling modulator 1 	ENST00000440944.1|GPSM1|ENSG00000160360.7|G-protein signaling modulator 1
hg19_v2_chrX_+_65384182_65384231	0.0118938	SOX9	ENST00000441993.2|HEPH|ENSG00000089472.12|hephaestin 	ENST00000419594.1|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr5_-_168006591_168006638	0.0116489	SOX9	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr3_+_16306837_16306973	0.0116204	SOX9	ENST00000606098.1|OXNAD1|ENSG00000154814.9|oxidoreductase NAD-binding domain containing 1
hg19_v2_chr3_-_123339418_123339473	0.0116066	SOX9	ENST00000583087.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr17_+_57233087_57233146	0.0111675	SOX9	ENST00000578777.1|PRR11|ENSG00000068489.8|proline rich 11 	ENST00000577457.1|PRR11|ENSG00000068489.8|proline rich 11 	ENST00000582995.1|PRR11|ENSG00000068489.8|proline rich 11
hg19_v2_chr17_+_54230819_54230871	0.0110696	SOX9	ENST00000318698.2|ANKFN1|ENSG00000153930.6|ankyrin-repeat and fibronectin type III domain containing 1 	ENST00000566473.2|ANKFN1|ENSG00000153930.6|ankyrin-repeat and fibronectin type III domain containing 1
hg19_v2_chr4_-_149363662_149363688	0.0108691	SOX9	ENST00000355292.3|NR3C2|ENSG00000151623.10|nuclear receptor subfamily 3, group C, member 2 	ENST00000358102.3|NR3C2|ENSG00000151623.10|nuclear receptor subfamily 3, group C, member 2
hg19_v2_chrX_-_2418936_2419024	0.0108307	SOX9	ENST00000461691.1|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381223.4|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381222.2|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000412516.2|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked 	ENST00000334651.5|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked
hg19_v2_chr19_+_45394477_45394546	0.010668	SOX9	ENST00000252487.5|TOMM40|ENSG00000130204.8|translocase of outer mitochondrial membrane 40 homolog (yeast) 	ENST00000405636.2|TOMM40|ENSG00000130204.8|translocase of outer mitochondrial membrane 40 homolog (yeast) 	ENST00000592434.1|TOMM40|ENSG00000130204.8|translocase of outer mitochondrial membrane 40 homolog (yeast) 	ENST00000426677.2|TOMM40|ENSG00000130204.8|translocase of outer mitochondrial membrane 40 homolog (yeast) 	ENST00000589649.1|TOMM40|ENSG00000130204.8|translocase of outer mitochondrial membrane 40 homolog (yeast)
hg19_v2_chr5_-_83680192_83680209	0.0105906	SOX9	ENST00000380138.3|EDIL3|ENSG00000164176.8|EGF-like repeats and discoidin I-like domains 3
hg19_v2_chrX_+_46306624_46306709	0.0103824	SOX9	ENST00000360017.5|KRBOX4|ENSG00000147121.11|KRAB box domain containing 4
hg19_v2_chr20_+_30795664_30795743	0.010325	SOX9	ENST00000375749.3|POFUT1|ENSG00000101346.7|protein O-fucosyltransferase 1 	ENST00000375730.3|POFUT1|ENSG00000101346.7|protein O-fucosyltransferase 1 	ENST00000539210.1|POFUT1|ENSG00000101346.7|protein O-fucosyltransferase 1
hg19_v2_chr17_+_57232690_57232860	0.010108	SOX9	ENST00000262293.4|PRR11|ENSG00000068489.8|proline rich 11
hg19_v2_chr12_-_99288986_99289078	0.0100862	SOX9	ENST00000552407.1|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000551613.1|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000548447.1|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000546364.3|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000552748.1|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v2_chr20_-_52645231_52645242	0.0098728	SOX9	ENST00000448484.1|BCAS1|ENSG00000064787.8|breast carcinoma amplified sequence 1
hg19_v2_chrX_-_19817869_19817922	0.00971937	SOX9	ENST00000379698.4|SH3KBP1|ENSG00000147010.13|SH3-domain kinase binding protein 1
hg19_v2_chr13_+_111767650_111767874	0.00960308	SOX9	ENST00000449979.1|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7 	ENST00000370623.3|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chr5_+_148521454_148521610	0.00942732	SOX9	ENST00000508983.1|ABLIM3|ENSG00000173210.15|actin binding LIM protein family, member 3
hg19_v2_chr5_-_175964366_175964429	0.00931005	SOX9	ENST00000274811.4|RNF44|ENSG00000146083.7|ring finger protein 44
hg19_v2_chr2_+_109271481_109271509	0.00930878	SOX9	ENST00000542845.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1 	ENST00000393314.2|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr12_+_54891495_54891526	0.00922116	SOX9	ENST00000293373.6|NCKAP1L|ENSG00000123338.8|NCK-associated protein 1-like
hg19_v2_chr3_-_49058479_49058491	0.00915609	SOX9	ENST00000440857.1|DALRD3|ENSG00000178149.12|DALR anticodon binding domain containing 3
hg19_v2_chr16_+_50775948_50775961	0.00900855	SOX9	ENST00000569681.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000569418.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000540145.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome)
hg19_v2_chr1_+_33116765_33117088	0.00891237	SOX9	ENST00000544435.1|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000373485.1|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000458695.2|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000490500.1|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000445722.2|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4
hg19_v2_chr17_+_7477040_7477257	0.00886653	SOX9	ENST00000581384.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000577929.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1
hg19_v2_chr7_+_111846643_111846704	0.00882115	SOX9	ENST00000361822.3|ZNF277|ENSG00000198839.5|zinc finger protein 277
hg19_v2_chrX_-_130037162_130037190	0.0085018	SOX9	ENST00000432489.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2
hg19_v2_chr1_+_66458072_66458109	0.00840049	SOX9	ENST00000423207.2|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific
hg19_v2_chr3_+_113616317_113616364	0.00816019	SOX9	ENST00000440446.2|GRAMD1C|ENSG00000178075.15|GRAM domain containing 1C 	ENST00000488680.1|GRAMD1C|ENSG00000178075.15|GRAM domain containing 1C
hg19_v2_chrX_-_110654147_110654194	0.00806228	SOX9	ENST00000358070.4|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr10_-_11653753_11653806	0.00787525	SOX9	ENST00000609104.1|USP6NL|ENSG00000148429.10|USP6 N-terminal like
hg19_v2_chr19_-_45004556_45004581	0.00734487	SOX9	ENST00000587047.1|ZNF180|ENSG00000167384.6|zinc finger protein 180 	ENST00000391956.4|ZNF180|ENSG00000167384.6|zinc finger protein 180 	ENST00000221327.4|ZNF180|ENSG00000167384.6|zinc finger protein 180 	ENST00000586637.1|ZNF180|ENSG00000167384.6|zinc finger protein 180 	ENST00000591064.1|ZNF180|ENSG00000167384.6|zinc finger protein 180 	ENST00000592529.1|ZNF180|ENSG00000167384.6|zinc finger protein 180
hg19_v2_chr1_-_68698222_68698266	0.00723554	SOX9	ENST00000370976.3|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000354777.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000262348.4|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000540432.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr12_+_95611569_95611608	0.00668797	SOX9	ENST00000261219.6|VEZT|ENSG00000028203.13|vezatin, adherens junctions transmembrane protein 	ENST00000551472.1|VEZT|ENSG00000028203.13|vezatin, adherens junctions transmembrane protein 	ENST00000552821.1|VEZT|ENSG00000028203.13|vezatin, adherens junctions transmembrane protein
hg19_v2_chr2_+_86668464_86668584	0.0063923	SOX9	ENST00000409064.1|KDM3A|ENSG00000115548.12|lysine (K)-specific demethylase 3A
hg19_v2_chr5_-_64777685_64777712	0.00634512	SOX9	ENST00000536360.1|ADAMTS6|ENSG00000049192.10|ADAM metallopeptidase with thrombospondin type 1 motif, 6
hg19_v2_chr1_+_26737253_26737269	0.0063047	SOX9	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr16_+_88636875_88636886	0.0062062	SOX9	ENST00000569435.1|ZC3H18|ENSG00000158545.11|zinc finger CCCH-type containing 18
hg19_v2_chr10_-_97321165_97321176	0.00472895	SOX9	ENST00000306402.6|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1
hg19_v2_chr3_+_111260856_111260948	0.0045516	SOX9	ENST00000352690.4|CD96|ENSG00000153283.8|CD96 molecule
hg19_v2_chr2_-_100721923_100722045	0.00441719	SOX9	ENST00000356421.2|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3
hg19_v2_chr8_+_62747349_62747515	0.00418523	SOX9	ENST00000517953.1|RP11-705O24.1|ENSG00000254119.1|RP11-705O24.1	ENST00000520097.1|RP11-705O24.1|ENSG00000254119.1|RP11-705O24.1	ENST00000519766.1|RP11-705O24.1|ENSG00000254119.1|RP11-705O24.1
hg19_v2_chr19_-_59031118_59031193	0.00417184	SOX9	ENST00000600990.1|ZBTB45|ENSG00000119574.8|zinc finger and BTB domain containing 45
hg19_v2_chr5_-_159546396_159546470	0.0040925	SOX9	ENST00000523662.1|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000456329.3|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000307063.7|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A
hg19_v2_chr9_-_21482312_21482312	0.00355518	SOX9	ENST00000448696.3|IFNE|ENSG00000184995.6|interferon, epsilon
hg19_v2_chr12_+_49621658_49621709	0.00324528	SOX9	ENST00000541364.1|TUBA1C|ENSG00000167553.10|tubulin, alpha 1c
hg19_v2_chr1_+_185703513_185703683	0.00321599	SOX9	ENST00000271588.4|HMCN1|ENSG00000143341.7|hemicentin 1 	ENST00000367492.2|HMCN1|ENSG00000143341.7|hemicentin 1
hg19_v2_chr6_+_97372596_97372644	0.00286793	SOX9	ENST00000369261.4|KLHL32|ENSG00000186231.12|kelch-like family member 32
hg19_v2_chr10_-_120101804_120101843	0.00271109	SOX9	ENST00000369183.4|FAM204A|ENSG00000165669.9|family with sequence similarity 204, member A 	ENST00000369172.4|FAM204A|ENSG00000165669.9|family with sequence similarity 204, member A
hg19_v2_chr9_-_35111420_35111455	0.00244057	SOX9	ENST00000378557.1|FAM214B|ENSG00000005238.15|family with sequence similarity 214, member B
hg19_v2_chr12_-_111358372_111358389	0.00236786	SOX9	ENST00000548438.1|MYL2|ENSG00000111245.10|myosin, light chain 2, regulatory, cardiac, slow 	ENST00000228841.8|MYL2|ENSG00000111245.10|myosin, light chain 2, regulatory, cardiac, slow
hg19_v2_chr19_-_59030921_59030974	0.00225794	SOX9	ENST00000354590.3|ZBTB45|ENSG00000119574.8|zinc finger and BTB domain containing 45 	ENST00000596739.1|ZBTB45|ENSG00000119574.8|zinc finger and BTB domain containing 45
hg19_v2_chr11_-_76155618_76155676	0.00221027	SOX9	ENST00000530759.1|RP11-111M22.3|ENSG00000255135.3|RP11-111M22.3
hg19_v2_chr5_-_157079372_157079395	0.00194017	SOX9	ENST00000311371.5|SOX30|ENSG00000039600.6|SRY (sex determining region Y)-box 30
hg19_v2_chr15_+_85923797_85923844	0.0019066	SOX9	ENST00000559362.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr3_+_69985792_69985874	0.00180876	SOX9	ENST00000531774.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr3_+_111260954_111260977	0.00177814	SOX9	ENST00000283285.5|CD96|ENSG00000153283.8|CD96 molecule
hg19_v2_chrX_+_9880590_9880723	0.00164791	SOX9	ENST00000452575.1|SHROOM2|ENSG00000146950.8|shroom family member 2
hg19_v2_chr12_-_8815215_8815298	0.00164641	SOX9	ENST00000544889.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5 	ENST00000543369.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr6_+_53976235_53976254	0.00159334	SOX9	ENST00000502396.1|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein 	ENST00000358276.5|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein
hg19_v2_chr4_-_87028478_87028514	0.00145882	SOX9	ENST00000515400.1|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395157.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr5_-_157079428_157079452	0.000915356	SOX9	ENST00000265007.6|SOX30|ENSG00000039600.6|SRY (sex determining region Y)-box 30
hg19_v2_chr17_-_7761256_7761397	0.000656734	SOX9	ENST00000575208.1|LSMD1|ENSG00000183011.9|LSM domain containing 1
hg19_v2_chr1_-_167883353_167883453	0.000429238	SOX9	ENST00000545172.1|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble)
hg19_v2_chr2_+_166428839_166428859	0.000406856	SOX9	ENST00000342316.4|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chr18_-_53177984_53178004	6.58902e-05	SOX9	ENST00000543082.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr6_+_53976285_53976308	5.41148e-05	SOX9	ENST00000514433.1|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein
