hg19_v2_chr7_-_92777606_92777723	0.715008	SHOX	ENST00000437805.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000446959.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000439952.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000414791.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000446033.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000411955.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000318238.4|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like
hg19_v2_chr7_-_92747269_92747336	0.351957	SHOX	ENST00000446617.1|SAMD9|ENSG00000205413.3|sterile alpha motif domain containing 9 	ENST00000379958.2|SAMD9|ENSG00000205413.3|sterile alpha motif domain containing 9
hg19_v2_chr5_-_126409159_126409200	0.221925	SHOX	ENST00000607731.1|C5orf63|ENSG00000164241.9|chromosome 5 open reading frame 63 	ENST00000535381.1|C5orf63|ENSG00000164241.9|chromosome 5 open reading frame 63 	ENST00000296662.5|C5orf63|ENSG00000164241.9|chromosome 5 open reading frame 63 	ENST00000509733.3|C5orf63|ENSG00000164241.9|chromosome 5 open reading frame 63
hg19_v2_chr8_-_139926236_139926269	0.221401	SHOX	ENST00000303045.6|COL22A1|ENSG00000169436.12|collagen, type XXII, alpha 1 	ENST00000435777.1|COL22A1|ENSG00000169436.12|collagen, type XXII, alpha 1
hg19_v2_chr11_-_33913708_33913836	0.209402	SHOX	ENST00000257818.2|LMO2|ENSG00000135363.7|LIM domain only 2 (rhombotin-like 1)
hg19_v2_chr14_-_37051798_37051831	0.207922	SHOX	ENST00000258829.5|NKX2-8|ENSG00000136327.6|NK2 homeobox 8
hg19_v2_chr14_-_98444386_98444415	0.196905	SHOX	ENST00000556462.1|C14orf64|ENSG00000246223.4|chromosome 14 open reading frame 64 	ENST00000556138.1|C14orf64|ENSG00000246223.4|chromosome 14 open reading frame 64
hg19_v2_chr3_-_108248169_108248169	0.188225	SHOX	ENST00000273353.3|MYH15|ENSG00000144821.5|myosin, heavy chain 15
hg19_v2_chrX_-_77150911_77150960	0.183106	SHOX	ENST00000373336.3|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr17_-_38928414_38928414	0.17137	SHOX	ENST00000335552.4|KRT26|ENSG00000186393.5|keratin 26
hg19_v2_chr4_+_169013666_169013697	0.170259	SHOX	ENST00000359299.3|ANXA10|ENSG00000109511.6|annexin A10
hg19_v2_chr3_+_156393349_156393363	0.164561	SHOX	ENST00000473702.1|TIPARP|ENSG00000163659.8|TCDD-inducible poly(ADP-ribose) polymerase
hg19_v2_chr17_-_19015945_19015970	0.158653	SHOX	ENST00000573866.2|SNORD3D|ENSG00000262202.3|small nucleolar RNA, C/D box 3D
hg19_v2_chr4_+_183065793_183065864	0.155119	SHOX	ENST00000512480.1|TENM3|ENSG00000218336.3|teneurin transmembrane protein 3
hg19_v2_chr6_-_31107127_31107127	0.152548	SHOX	ENST00000259845.4|PSORS1C2|ENSG00000204538.3|psoriasis susceptibility 1 candidate 2
hg19_v2_chr17_-_78450398_78450413	0.146922	SHOX	ENST00000306773.4|NPTX1|ENSG00000171246.5|neuronal pentraxin I
hg19_v2_chr10_-_104866395_104866421	0.146705	SHOX	ENST00000458345.1|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II
hg19_v2_chr9_-_75488984_75489052	0.145193	SHOX	ENST00000423171.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1	ENST00000449235.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1	ENST00000453787.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1
hg19_v2_chr16_+_69139467_69139585	0.144444	SHOX	ENST00000569188.1|HAS3|ENSG00000103044.6|hyaluronan synthase 3
hg19_v2_chr15_+_80351910_80351955	0.14024	SHOX	ENST00000261749.6|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000561060.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6
hg19_v2_chr19_-_3557570_3557590	0.139906	SHOX	ENST00000355415.2|MFSD12|ENSG00000161091.8|major facilitator superfamily domain containing 12
hg19_v2_chr1_+_225600404_225600404	0.136001	SHOX	ENST00000366845.2|AC092811.1|ENSG00000203691.2|AC092811.1
hg19_v2_chr1_+_209878182_209878203	0.13248	SHOX	ENST00000367027.3|HSD11B1|ENSG00000117594.5|hydroxysteroid (11-beta) dehydrogenase 1
hg19_v2_chr3_-_157824292_157824334	0.130552	SHOX	ENST00000483851.2|SHOX2|ENSG00000168779.15|short stature homeobox 2
hg19_v2_chr8_+_119294456_119294486	0.130236	SHOX	ENST00000366457.2|AC023590.1|ENSG00000225885.2|Uncharacterized protein
hg19_v2_chr2_+_169926047_169926086	0.128435	SHOX	ENST00000428522.1|DHRS9|ENSG00000073737.12|dehydrogenase/reductase (SDR family) member 9 	ENST00000450153.1|DHRS9|ENSG00000073737.12|dehydrogenase/reductase (SDR family) member 9 	ENST00000421653.1|DHRS9|ENSG00000073737.12|dehydrogenase/reductase (SDR family) member 9
hg19_v2_chr12_+_52695617_52695649	0.126957	SHOX	ENST00000293525.5|KRT86|ENSG00000170442.7|keratin 86
hg19_v2_chrX_-_106243294_106243313	0.126949	SHOX	ENST00000255495.7|MORC4|ENSG00000133131.10|MORC family CW-type zinc finger 4
hg19_v2_chr2_+_45168875_45168916	0.125812	SHOX	ENST00000260653.3|SIX3|ENSG00000138083.3|SIX homeobox 3
hg19_v2_chr1_-_68698222_68698266	0.125345	SHOX	ENST00000370976.3|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000354777.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000262348.4|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000540432.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr10_+_90660832_90660832	0.120367	SHOX	ENST00000371924.1|STAMBPL1|ENSG00000138134.7|STAM binding protein-like 1
hg19_v2_chr6_+_126221034_126221056	0.116397	SHOX	ENST00000433571.1|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7
hg19_v2_chr20_+_42136308_42136358	0.116193	SHOX	ENST00000434666.1|L3MBTL1|ENSG00000185513.10|l(3)mbt-like 1 (Drosophila) 	ENST00000427442.2|L3MBTL1|ENSG00000185513.10|l(3)mbt-like 1 (Drosophila) 	ENST00000439769.1|L3MBTL1|ENSG00000185513.10|l(3)mbt-like 1 (Drosophila) 	ENST00000418998.1|L3MBTL1|ENSG00000185513.10|l(3)mbt-like 1 (Drosophila)
hg19_v2_chr12_-_89746264_89746284	0.115571	SHOX	ENST00000548755.1|DUSP6|ENSG00000139318.7|dual specificity phosphatase 6
hg19_v2_chr10_-_7453445_7453459	0.113747	SHOX	ENST00000379713.3|SFMBT2|ENSG00000198879.7|Scm-like with four mbt domains 2 	ENST00000397167.1|SFMBT2|ENSG00000198879.7|Scm-like with four mbt domains 2 	ENST00000397160.3|SFMBT2|ENSG00000198879.7|Scm-like with four mbt domains 2
hg19_v2_chr7_+_129015484_129015519	0.112917	SHOX	ENST00000490911.1|AHCYL2|ENSG00000158467.12|adenosylhomocysteinase-like 2
hg19_v2_chr7_+_129015671_129015685	0.112393	SHOX	ENST00000466993.1|AHCYL2|ENSG00000158467.12|adenosylhomocysteinase-like 2
hg19_v2_chrX_-_19817869_19817922	0.110246	SHOX	ENST00000379698.4|SH3KBP1|ENSG00000147010.13|SH3-domain kinase binding protein 1
hg19_v2_chr17_+_19091325_19091329	0.108758	SHOX	ENST00000584923.1|SNORD3A|ENSG00000263934.2|small nucleolar RNA, C/D box 3A
hg19_v2_chr8_+_42873548_42873567	0.108349	SHOX	ENST00000533338.1|HOOK3|ENSG00000168172.4|hook microtubule-tethering protein 3 	ENST00000534420.1|RP11-598P20.5|ENSG00000254673.1|Uncharacterized protein
hg19_v2_chr4_-_41884620_41884663	0.10702	SHOX	ENST00000504870.1|LINC00682|ENSG00000245870.2|long intergenic non-protein coding RNA 682
hg19_v2_chrX_+_134654540_134654591	0.106543	SHOX	ENST00000370752.4|DDX26B|ENSG00000165359.10|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
hg19_v2_chr1_-_183538319_183538365	0.104911	SHOX	ENST00000420553.1|NCF2|ENSG00000116701.10|neutrophil cytosolic factor 2 	ENST00000419402.1|NCF2|ENSG00000116701.10|neutrophil cytosolic factor 2
hg19_v2_chrX_-_106243451_106243490	0.104321	SHOX	ENST00000355610.4|MORC4|ENSG00000133131.10|MORC family CW-type zinc finger 4 	ENST00000535534.1|MORC4|ENSG00000133131.10|MORC family CW-type zinc finger 4
hg19_v2_chr1_-_92952433_92952489	0.104257	SHOX	ENST00000294702.5|GFI1|ENSG00000162676.7|growth factor independent 1 transcription repressor
hg19_v2_chr18_+_34124507_34124520	0.100703	SHOX	ENST00000591635.1|FHOD3|ENSG00000134775.11|formin homology 2 domain containing 3
hg19_v2_chr12_-_10022735_10022735	0.0985888	SHOX	ENST00000228438.2|CLEC2B|ENSG00000110852.4|C-type lectin domain family 2, member B
hg19_v2_chr2_+_66918558_66918580	0.0985371	SHOX	ENST00000435389.1|AC007392.3|ENSG00000232046.2|AC007392.3	ENST00000428590.1|AC007392.3|ENSG00000232046.2|AC007392.3	ENST00000412944.1|AC007392.3|ENSG00000232046.2|AC007392.3
hg19_v2_chr7_-_111424506_111424539	0.0973427	SHOX	ENST00000450156.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000494651.2|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr3_-_52090461_52090566	0.0965622	SHOX	ENST00000296483.6|DUSP7|ENSG00000164086.8|dual specificity phosphatase 7 	ENST00000495880.1|DUSP7|ENSG00000164086.8|dual specificity phosphatase 7
hg19_v2_chr15_-_33180439_33180455	0.0961484	SHOX	ENST00000559610.1|FMN1|ENSG00000248905.4|formin 1
hg19_v2_chr19_+_48949087_48949116	0.0961301	SHOX	ENST00000598711.1|GRWD1|ENSG00000105447.8|glutamate-rich WD repeat containing 1
hg19_v2_chrX_+_78003204_78003248	0.0948326	SHOX	ENST00000435339.3|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4 	ENST00000514744.1|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4
hg19_v2_chr17_-_71223839_71223887	0.0944934	SHOX	ENST00000579872.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000580032.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chrX_+_591524_591542	0.0937402	SHOX	ENST00000554971.1|SHOX|ENSG00000185960.8|short stature homeobox 	ENST00000381575.1|SHOX|ENSG00000185960.8|short stature homeobox
hg19_v2_chr12_+_78359999_78360056	0.0934808	SHOX	ENST00000550503.1|NAV3|ENSG00000067798.9|neuron navigator 3
hg19_v2_chr20_+_55967129_55967286	0.0928875	SHOX	ENST00000371219.2|RBM38|ENSG00000132819.12|RNA binding motif protein 38
hg19_v2_chr10_-_36812323_36812323	0.0925189	SHOX	ENST00000543053.1|NAMPTL|ENSG00000229644.4|nicotinamide phosphoribosyltransferase-like
hg19_v2_chr7_+_37723336_37723410	0.0923395	SHOX	ENST00000450180.1|GPR141|ENSG00000187037.4|G protein-coupled receptor 141
hg19_v2_chr1_-_68698197_68698214	0.0896312	SHOX	ENST00000370973.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000370971.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr11_+_4470525_4470525	0.0871467	SHOX	ENST00000325719.4|OR52K2|ENSG00000181963.5|olfactory receptor, family 52, subfamily K, member 2
hg19_v2_chr2_-_61697862_61697919	0.0856971	SHOX	ENST00000398571.2|USP34|ENSG00000115464.10|ubiquitin specific peptidase 34
hg19_v2_chr11_-_121986923_121986923	0.0835729	SHOX	ENST00000560104.1|BLID|ENSG00000259571.1|BH3-like motif containing, cell death inducer
hg19_v2_chr12_-_10282836_10282863	0.0828485	SHOX	ENST00000304084.8|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000353231.5|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000525605.1|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A
hg19_v2_chr12_-_51422017_51422058	0.0809064	SHOX	ENST00000394904.3|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
hg19_v2_chr9_+_22646189_22646204	0.0778021	SHOX	ENST00000436786.1|RP11-399D6.2|ENSG00000234840.1|RP11-399D6.2
hg19_v2_chr7_+_100136811_100136882	0.0769301	SHOX	ENST00000300176.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2 	ENST00000262935.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2
hg19_v2_chr5_-_150473127_150473157	0.0767385	SHOX	ENST00000521001.1|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1
hg19_v2_chr8_-_42234745_42234750	0.07617	SHOX	ENST00000220812.2|DKK4|ENSG00000104371.4|dickkopf WNT signaling pathway inhibitor 4
hg19_v2_chr12_-_89746173_89746188	0.0758087	SHOX	ENST00000308385.6|DUSP6|ENSG00000139318.7|dual specificity phosphatase 6
hg19_v2_chr1_-_242612726_242612777	0.0755676	SHOX	ENST00000459864.1|PLD5|ENSG00000180287.12|phospholipase D family, member 5
hg19_v2_chr11_-_74800799_74800799	0.0746474	SHOX	ENST00000305159.3|OR2AT4|ENSG00000171561.3|olfactory receptor, family 2, subfamily AT, member 4
hg19_v2_chr1_-_150738261_150738433	0.0745885	SHOX	ENST00000448301.2|CTSS|ENSG00000163131.6|cathepsin S 	ENST00000368985.3|CTSS|ENSG00000163131.6|cathepsin S
hg19_v2_chr6_-_37665751_37665781	0.0745797	SHOX	ENST00000297153.7|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1 	ENST00000434837.3|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1
hg19_v2_chr8_-_128231299_128231352	0.0733938	SHOX	ENST00000500112.1|CCAT1|ENSG00000247844.1|colon cancer associated transcript 1 (non-protein coding)
hg19_v2_chr3_-_157221380_157221415	0.0725013	SHOX	ENST00000468233.1|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1
hg19_v2_chr3_-_33686925_33687000	0.0702917	SHOX	ENST00000485378.2|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000313350.6|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000487200.1|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr13_-_46716969_46717015	0.0691716	SHOX	ENST00000435666.2|LCP1|ENSG00000136167.9|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v2_chr18_+_21572737_21572768	0.0691437	SHOX	ENST00000304621.6|TTC39C|ENSG00000168234.8|tetratricopeptide repeat domain 39C
hg19_v2_chr17_+_47448102_47448102	0.0689616	SHOX	ENST00000576461.1|RP11-81K2.1|ENSG00000262039.1|Uncharacterized protein
hg19_v2_chr11_+_35222629_35222660	0.0682623	SHOX	ENST00000526553.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group)
hg19_v2_chr12_-_10282742_10282817	0.0681435	SHOX	ENST00000298523.5|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000396484.2|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000310002.4|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A
hg19_v2_chr9_+_82186872_82186898	0.0667981	SHOX	ENST00000376544.3|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376520.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr2_+_143635067_143635211	0.0667332	SHOX	ENST00000264170.4|KYNU|ENSG00000115919.10|kynureninase
hg19_v2_chr1_-_45956822_45956847	0.0652589	SHOX	ENST00000372086.3|TESK2|ENSG00000070759.12|testis-specific kinase 2 	ENST00000341771.6|TESK2|ENSG00000070759.12|testis-specific kinase 2
hg19_v2_chr12_-_16760195_16760323	0.0652156	SHOX	ENST00000546281.1|LMO3|ENSG00000048540.10|LIM domain only 3 (rhombotin-like 2) 	ENST00000537757.1|LMO3|ENSG00000048540.10|LIM domain only 3 (rhombotin-like 2)
hg19_v2_chr3_-_27763803_27763822	0.0651844	SHOX	ENST00000449599.1|EOMES|ENSG00000163508.8|eomesodermin
hg19_v2_chr12_-_30887948_30887997	0.064251	SHOX	ENST00000433722.2|CAPRIN2|ENSG00000110888.13|caprin family member 2
hg19_v2_chr5_-_24645078_24645096	0.062887	SHOX	ENST00000264463.4|CDH10|ENSG00000040731.6|cadherin 10, type 2 (T2-cadherin)
hg19_v2_chr3_-_141747950_141748004	0.0620222	SHOX	ENST00000497579.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr15_+_101420028_101420080	0.0605563	SHOX	ENST00000557963.1|ALDH1A3|ENSG00000184254.12|aldehyde dehydrogenase 1 family, member A3 	ENST00000346623.6|ALDH1A3|ENSG00000184254.12|aldehyde dehydrogenase 1 family, member A3
hg19_v2_chr2_+_234826016_234826050	0.060301	SHOX	ENST00000324695.4|TRPM8|ENSG00000144481.12|transient receptor potential cation channel, subfamily M, member 8 	ENST00000433712.2|TRPM8|ENSG00000144481.12|transient receptor potential cation channel, subfamily M, member 8
hg19_v2_chr13_-_81801115_81801122	0.0602103	SHOX	ENST00000567258.1|LINC00564|ENSG00000260094.1|long intergenic non-protein coding RNA 564
hg19_v2_chr12_+_19358192_19358212	0.0596639	SHOX	ENST00000538305.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5
hg19_v2_chr9_-_16276311_16276311	0.0587499	SHOX	ENST00000380685.1|C9orf92|ENSG00000205549.4|chromosome 9 open reading frame 92
hg19_v2_chr2_+_54951679_54951679	0.0584324	SHOX	ENST00000356458.6|EML6|ENSG00000214595.7|echinoderm microtubule associated protein like 6
hg19_v2_chr20_+_42544782_42544828	0.0583103	SHOX	ENST00000423191.2|TOX2|ENSG00000124191.13|TOX high mobility group box family member 2 	ENST00000372999.1|TOX2|ENSG00000124191.13|TOX high mobility group box family member 2
hg19_v2_chr19_+_45458503_45458657	0.0575262	SHOX	ENST00000337392.5|CLPTM1|ENSG00000104853.11|cleft lip and palate associated transmembrane protein 1 	ENST00000591304.1|CLPTM1|ENSG00000104853.11|cleft lip and palate associated transmembrane protein 1
hg19_v2_chr11_+_110001723_110001732	0.0574729	SHOX	ENST00000528673.1|ZC3H12C|ENSG00000149289.6|zinc finger CCCH-type containing 12C
hg19_v2_chr7_-_14026063_14026091	0.0573942	SHOX	ENST00000443608.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000438956.1|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chrX_-_10851762_10851782	0.0572028	SHOX	ENST00000380785.1|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome) 	ENST00000380787.1|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome)
hg19_v2_chr10_+_24755416_24755470	0.0568878	SHOX	ENST00000396446.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000396445.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000376451.2|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr6_+_153552455_153552455	0.0568051	SHOX	ENST00000392385.2|AL590867.1|ENSG00000213121.2|Uncharacterized protein; cDNA FLJ59044, highly similar to LINE-1 reverse transcriptase homolog
hg19_v2_chr19_-_14064114_14064204	0.0562111	SHOX	ENST00000585607.1|PODNL1|ENSG00000132000.7|podocan-like 1 	ENST00000538517.2|PODNL1|ENSG00000132000.7|podocan-like 1 	ENST00000587458.1|PODNL1|ENSG00000132000.7|podocan-like 1 	ENST00000538371.2|PODNL1|ENSG00000132000.7|podocan-like 1
hg19_v2_chr1_+_198608146_198608247	0.0559445	SHOX	ENST00000367376.2|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000352140.3|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000594404.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000598951.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000530727.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000442510.2|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000367367.4|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000348564.6|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000367364.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000413409.2|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C
hg19_v2_chr1_-_168464875_168464884	0.0549503	SHOX	ENST00000422253.1|RP5-968D22.3|ENSG00000237658.1|RP5-968D22.3
hg19_v2_chr4_-_40477766_40477783	0.0549487	SHOX	ENST00000507180.1|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr2_-_55647057_55647082	0.054854	SHOX	ENST00000436346.1|CCDC88A|ENSG00000115355.11|coiled-coil domain containing 88A
hg19_v2_chr14_+_57671888_57671888	0.0548518	SHOX	ENST00000391612.1|AL391152.1|ENSG00000212928.1|AL391152.1
hg19_v2_chr2_+_201173667_201173680	0.0546802	SHOX	ENST00000409755.3|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chr17_+_72427477_72427667	0.0545614	SHOX	ENST00000342648.5|GPRC5C|ENSG00000170412.12|G protein-coupled receptor, family C, group 5, member C 	ENST00000481232.1|GPRC5C|ENSG00000170412.12|G protein-coupled receptor, family C, group 5, member C
hg19_v2_chr1_-_190446759_190446774	0.0535239	SHOX	ENST00000367462.3|BRINP3|ENSG00000162670.8|bone morphogenetic protein/retinoic acid inducible neural-specific 3
hg19_v2_chr1_+_12042015_12042049	0.0534688	SHOX	ENST00000412236.1|MFN2|ENSG00000116688.12|mitofusin 2
hg19_v2_chr8_+_94752349_94752349	0.0534539	SHOX	ENST00000391680.1|RBM12B-AS1|ENSG00000212998.1|RBM12B antisense RNA 1
hg19_v2_chr10_+_111765562_111765583	0.0529555	SHOX	ENST00000360162.3|ADD3|ENSG00000148700.9|adducin 3 (gamma)
hg19_v2_chr1_+_206557366_206557368	0.052919	SHOX	ENST00000414007.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2 	ENST00000419187.2|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr10_+_35484793_35484937	0.0524433	SHOX	ENST00000488741.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000474931.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000468236.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000344351.5|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000490511.1|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr17_+_56833184_56833249	0.0522673	SHOX	ENST00000308249.2|PPM1E|ENSG00000175175.4|protein phosphatase, Mg2+/Mn2+ dependent, 1E
hg19_v2_chr2_-_190446738_190446765	0.0518177	SHOX	ENST00000427419.1|SLC40A1|ENSG00000138449.6|solute carrier family 40 (iron-regulated transporter), member 1 	ENST00000455320.1|SLC40A1|ENSG00000138449.6|solute carrier family 40 (iron-regulated transporter), member 1
hg19_v2_chrX_+_7137475_7137504	0.0514176	SHOX	ENST00000217961.4|STS|ENSG00000101846.6|steroid sulfatase (microsomal), isozyme S
hg19_v2_chr14_-_36988882_36988898	0.0514085	SHOX	ENST00000498187.2|NKX2-1|ENSG00000136352.13|NK2 homeobox 1
hg19_v2_chr2_-_145277569_145277580	0.0512414	SHOX	ENST00000303660.4|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
hg19_v2_chr2_-_55646957_55647027	0.0511174	SHOX	ENST00000263630.8|CCDC88A|ENSG00000115355.11|coiled-coil domain containing 88A
hg19_v2_chr7_-_14026123_14026139	0.0509923	SHOX	ENST00000420159.2|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000399357.3|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000403527.1|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr8_+_107460147_107460207	0.0505922	SHOX	ENST00000442977.2|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chr15_+_67390920_67391046	0.0503262	SHOX	ENST00000559092.1|SMAD3|ENSG00000166949.11|SMAD family member 3 	ENST00000560175.1|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr11_-_16419067_16419108	0.0502122	SHOX	ENST00000533411.1|SOX6|ENSG00000110693.11|SRY (sex determining region Y)-box 6
hg19_v2_chr2_+_149402989_149402989	0.0498061	SHOX	ENST00000397424.2|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila)
hg19_v2_chr15_-_55562479_55562490	0.049445	SHOX	ENST00000564609.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr10_-_21186144_21186247	0.049372	SHOX	ENST00000377119.1|NEBL|ENSG00000078114.14|nebulette
hg19_v2_chr8_-_90996837_90996944	0.0493475	SHOX	ENST00000519426.1|NBN|ENSG00000104320.9|nibrin 	ENST00000265433.3|NBN|ENSG00000104320.9|nibrin
hg19_v2_chr7_-_23510086_23510118	0.0492918	SHOX	ENST00000258729.3|IGF2BP3|ENSG00000136231.9|insulin-like growth factor 2 mRNA binding protein 3
hg19_v2_chr1_-_45956800_45956821	0.0490183	SHOX	ENST00000538496.1|TESK2|ENSG00000070759.12|testis-specific kinase 2
hg19_v2_chr7_-_107642348_107642472	0.0489168	SHOX	ENST00000393561.1|LAMB1|ENSG00000091136.9|laminin, beta 1
hg19_v2_chr1_+_168250194_168250278	0.0488484	SHOX	ENST00000367821.3|TBX19|ENSG00000143178.8|T-box 19
hg19_v2_chr20_+_18488137_18488255	0.0487206	SHOX	ENST00000450074.1|SEC23B|ENSG00000101310.10|Sec23 homolog B (S. cerevisiae) 	ENST00000262544.2|SEC23B|ENSG00000101310.10|Sec23 homolog B (S. cerevisiae) 	ENST00000336714.3|SEC23B|ENSG00000101310.10|Sec23 homolog B (S. cerevisiae) 	ENST00000377475.3|SEC23B|ENSG00000101310.10|Sec23 homolog B (S. cerevisiae)
hg19_v2_chr5_-_1882858_1883003	0.0483967	SHOX	ENST00000511126.1|IRX4|ENSG00000113430.5|iroquois homeobox 4 	ENST00000231357.2|IRX4|ENSG00000113430.5|iroquois homeobox 4
hg19_v2_chr9_+_82187630_82187722	0.0483163	SHOX	ENST00000265284.6|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr7_-_14029515_14029642	0.0483082	SHOX	ENST00000430479.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000405218.2|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000343495.5|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr2_-_208031943_208031991	0.0481444	SHOX	ENST00000421199.1|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous) 	ENST00000457962.1|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr8_-_90996459_90996632	0.0481309	SHOX	ENST00000517337.1|NBN|ENSG00000104320.9|nibrin 	ENST00000409330.1|NBN|ENSG00000104320.9|nibrin
hg19_v2_chr9_+_82187487_82187557	0.0481035	SHOX	ENST00000435650.1|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000414465.1|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376537.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376534.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr12_+_104680793_104680837	0.0480946	SHOX	ENST00000529546.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000529751.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000540716.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000528079.2|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000526580.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1
hg19_v2_chr2_-_145278475_145278621	0.0480222	SHOX	ENST00000558170.2|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
hg19_v2_chr2_+_149447783_149447783	0.0480139	SHOX	ENST00000449013.1|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila)
hg19_v2_chr1_-_232651312_232651312	0.0478151	SHOX	ENST00000262861.4|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr20_-_25320367_25320394	0.0461662	SHOX	ENST00000450393.1|ABHD12|ENSG00000100997.14|abhydrolase domain containing 12 	ENST00000491682.1|ABHD12|ENSG00000100997.14|abhydrolase domain containing 12
hg19_v2_chr2_-_190927447_190927466	0.0461354	SHOX	ENST00000260950.4|MSTN|ENSG00000138379.4|myostatin
hg19_v2_chr6_+_55192267_55192267	0.0458184	SHOX	ENST00000340465.2|GFRAL|ENSG00000187871.2|GDNF family receptor alpha like
hg19_v2_chr15_+_80351977_80352061	0.0457578	SHOX	ENST00000559157.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000561012.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000564367.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558494.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6
hg19_v2_chr16_+_68119440_68119561	0.0456675	SHOX	ENST00000346183.3|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 	ENST00000329524.4|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
hg19_v2_chr14_+_23025534_23025534	0.0455578	SHOX	ENST00000557595.1|AE000662.92|ENSG00000259003.1|Uncharacterized protein
hg19_v2_chr2_+_210444142_210444194	0.0455129	SHOX	ENST00000360351.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2 	ENST00000361559.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr17_-_39203519_39203568	0.0452433	SHOX	ENST00000542137.1|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1 	ENST00000391419.3|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1
hg19_v2_chr17_-_77924627_77924661	0.0450798	SHOX	ENST00000572862.1|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16 	ENST00000573782.1|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16 	ENST00000574427.1|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16 	ENST00000570373.1|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16 	ENST00000340848.7|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16 	ENST00000576768.1|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16
hg19_v2_chr2_+_171034646_171034706	0.0449767	SHOX	ENST00000409044.3|MYO3B|ENSG00000071909.14|myosin IIIB 	ENST00000408978.4|MYO3B|ENSG00000071909.14|myosin IIIB
hg19_v2_chr3_-_187009646_187009778	0.0444873	SHOX	ENST00000296280.6|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 	ENST00000392470.2|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 	ENST00000169293.6|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 	ENST00000439271.1|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 	ENST00000392472.2|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 	ENST00000392475.2|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
hg19_v2_chr12_-_58135903_58135974	0.0442672	SHOX	ENST00000257897.3|AGAP2|ENSG00000135439.7|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
hg19_v2_chr7_-_14029283_14029311	0.0440584	SHOX	ENST00000433547.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000405192.2|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr13_-_36429763_36429779	0.0439284	SHOX	ENST00000379893.1|DCLK1|ENSG00000133083.10|doublecortin-like kinase 1
hg19_v2_chr6_+_31895254_31895274	0.0437052	SHOX	ENST00000299367.5|C2|ENSG00000166278.10|complement component 2 	ENST00000442278.2|C2|ENSG00000166278.10|complement component 2
hg19_v2_chr3_+_69985734_69985754	0.0436717	SHOX	ENST00000314557.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000394351.3|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr3_+_173116225_173116242	0.0436717	SHOX	ENST00000457714.1|NLGN1|ENSG00000169760.13|neuroligin 1
hg19_v2_chr12_-_52761262_52761267	0.0434769	SHOX	ENST00000257901.3|KRT85|ENSG00000135443.4|keratin 85
hg19_v2_chr3_-_157221357_157221365	0.0433051	SHOX	ENST00000494677.1|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1
hg19_v2_chr19_-_7697857_7697864	0.0431049	SHOX	ENST00000598935.1|PCP2|ENSG00000174788.5|Purkinje cell protein 2
hg19_v2_chr8_+_28748765_28748833	0.0428004	SHOX	ENST00000355231.5|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr20_+_3776371_3776506	0.0427271	SHOX	ENST00000245960.5|CDC25B|ENSG00000101224.13|cell division cycle 25B
hg19_v2_chr15_+_63188009_63188017	0.042624	SHOX	ENST00000557900.1|RP11-1069G10.2|ENSG00000259727.1|RP11-1069G10.2
hg19_v2_chr5_+_125758813_125758845	0.0423599	SHOX	ENST00000285689.3|GRAMD3|ENSG00000155324.5|GRAM domain containing 3 	ENST00000515200.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr6_-_161695042_161695064	0.0421273	SHOX	ENST00000366908.5|AGPAT4|ENSG00000026652.9|1-acylglycerol-3-phosphate O-acyltransferase 4 	ENST00000366911.5|AGPAT4|ENSG00000026652.9|1-acylglycerol-3-phosphate O-acyltransferase 4 	ENST00000366905.3|AGPAT4|ENSG00000026652.9|1-acylglycerol-3-phosphate O-acyltransferase 4
hg19_v2_chr6_+_26402465_26402512	0.0416181	SHOX	ENST00000476549.2|BTN3A1|ENSG00000026950.12|butyrophilin, subfamily 3, member A1 	ENST00000289361.6|BTN3A1|ENSG00000026950.12|butyrophilin, subfamily 3, member A1 	ENST00000450085.2|BTN3A1|ENSG00000026950.12|butyrophilin, subfamily 3, member A1 	ENST00000425234.2|BTN3A1|ENSG00000026950.12|butyrophilin, subfamily 3, member A1 	ENST00000427334.1|BTN3A1|ENSG00000026950.12|butyrophilin, subfamily 3, member A1 	ENST00000506698.1|BTN3A1|ENSG00000026950.12|butyrophilin, subfamily 3, member A1
hg19_v2_chr5_+_125758865_125758876	0.0415263	SHOX	ENST00000542322.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3 	ENST00000544396.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr8_-_42358742_42358787	0.0413584	SHOX	ENST00000517366.1|SLC20A2|ENSG00000168575.5|solute carrier family 20 (phosphate transporter), member 2
hg19_v2_chr12_+_1099675_1099751	0.041349	SHOX	ENST00000545318.2|ERC1|ENSG00000082805.15|ELKS/RAB6-interacting/CAST family member 1
hg19_v2_chr5_+_174151536_174151610	0.0409863	SHOX	ENST00000239243.6|MSX2|ENSG00000120149.7|msh homeobox 2 	ENST00000507785.1|MSX2|ENSG00000120149.7|msh homeobox 2
hg19_v2_chr19_-_7968427_7968427	0.0408818	SHOX	ENST00000539278.1|AC010336.1|ENSG00000214248.2|Uncharacterized protein
hg19_v2_chr1_-_224624730_224624740	0.0407708	SHOX	ENST00000445239.1|WDR26|ENSG00000162923.10|WD repeat domain 26
hg19_v2_chr3_+_185431080_185431080	0.0407096	SHOX	ENST00000296270.1|C3orf65|ENSG00000163915.3|chromosome 3 open reading frame 65
hg19_v2_chr15_+_58430567_58430589	0.0406918	SHOX	ENST00000536493.1|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr20_-_45980621_45980649	0.040476	SHOX	ENST00000446894.1|ZMYND8|ENSG00000101040.15|zinc finger, MYND-type containing 8
hg19_v2_chr3_-_178984759_178984790	0.0401466	SHOX	ENST00000349697.2|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3 	ENST00000497599.1|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v2_chr13_-_103719196_103719196	0.0398186	SHOX	ENST00000245312.3|SLC10A2|ENSG00000125255.5|solute carrier family 10 (sodium/bile acid cotransporter), member 2
hg19_v2_chr2_-_224467002_224467085	0.0396743	SHOX	ENST00000421386.1|SCG2|ENSG00000171951.4|secretogranin II 	ENST00000433889.1|SCG2|ENSG00000171951.4|secretogranin II
hg19_v2_chr2_-_171571077_171571077	0.0394194	SHOX	ENST00000409786.1|AC007405.2|ENSG00000222033.1|long intergenic non-protein coding RNA 1124
hg19_v2_chrX_+_129473916_129474026	0.0393889	SHOX	ENST00000545805.1|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14 	ENST00000543953.1|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14 	ENST00000218197.5|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14
hg19_v2_chr19_+_48949030_48949086	0.039283	SHOX	ENST00000253237.5|GRWD1|ENSG00000105447.8|glutamate-rich WD repeat containing 1
hg19_v2_chr6_-_127780510_127780539	0.0392562	SHOX	ENST00000487331.2|KIAA0408|ENSG00000189367.10|KIAA0408 	ENST00000483725.3|KIAA0408|ENSG00000189367.10|KIAA0408
hg19_v2_chr11_+_75526212_75526301	0.038878	SHOX	ENST00000356136.3|UVRAG|ENSG00000198382.4|UV radiation resistance associated
hg19_v2_chr10_+_115511434_115511454	0.0380249	SHOX	ENST00000369312.4|PLEKHS1|ENSG00000148735.10|pleckstrin homology domain containing, family S member 1
hg19_v2_chr5_+_101569696_101569696	0.0373197	SHOX	ENST00000597120.1|AC008948.1|ENSG00000268424.1|AC008948.1
hg19_v2_chr2_+_152214098_152214115	0.037248	SHOX	ENST00000243347.3|TNFAIP6|ENSG00000123610.3|tumor necrosis factor, alpha-induced protein 6
hg19_v2_chr4_-_74486109_74486166	0.0372419	SHOX	ENST00000395777.2|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr14_+_101293687_101293748	0.0371618	SHOX	ENST00000455286.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding)
hg19_v2_chr7_+_12726623_12726750	0.0371572	SHOX	ENST00000439721.1|ARL4A|ENSG00000122644.8|ADP-ribosylation factor-like 4A
hg19_v2_chr1_-_94079648_94079671	0.0370075	SHOX	ENST00000370247.3|BCAR3|ENSG00000137936.12|breast cancer anti-estrogen resistance 3
hg19_v2_chr17_+_39405939_39405939	0.0369974	SHOX	ENST00000334109.2|KRTAP9-4|ENSG00000241595.1|keratin associated protein 9-4
hg19_v2_chr4_+_26324474_26324501	0.0368037	SHOX	ENST00000514675.1|RBPJ|ENSG00000168214.16|recombination signal binding protein for immunoglobulin kappa J region
hg19_v2_chr5_-_13944652_13944652	0.036582	SHOX	ENST00000265104.4|DNAH5|ENSG00000039139.9|dynein, axonemal, heavy chain 5
hg19_v2_chr14_+_65016620_65016664	0.0362989	SHOX	ENST00000298705.1|PPP1R36|ENSG00000165807.3|protein phosphatase 1, regulatory subunit 36
hg19_v2_chr2_-_200335983_200335994	0.0362377	SHOX	ENST00000457245.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr10_-_33623310_33623478	0.0362106	SHOX	ENST00000395995.1|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374823.5|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374821.5|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374816.3|NRP1|ENSG00000099250.13|neuropilin 1
hg19_v2_chr12_-_112123524_112123562	0.0361813	SHOX	ENST00000327551.6|BRAP|ENSG00000089234.11|BRCA1 associated protein
hg19_v2_chr14_-_73360796_73360817	0.035943	SHOX	ENST00000556509.1|DPF3|ENSG00000205683.7|D4, zinc and double PHD fingers, family 3 	ENST00000541685.1|DPF3|ENSG00000205683.7|D4, zinc and double PHD fingers, family 3 	ENST00000546183.1|DPF3|ENSG00000205683.7|D4, zinc and double PHD fingers, family 3
hg19_v2_chrX_+_107288239_107288259	0.0355748	SHOX	ENST00000217957.5|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr5_+_125759140_125759175	0.034558	SHOX	ENST00000543198.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr13_+_78315348_78315360	0.0344071	SHOX	ENST00000441784.1|SLAIN1|ENSG00000139737.17|SLAIN motif family, member 1
hg19_v2_chr11_+_107461804_107461882	0.0343951	SHOX	ENST00000531234.1|ELMOD1|ENSG00000110675.8|ELMO/CED-12 domain containing 1
hg19_v2_chr6_+_28317685_28317761	0.0343533	SHOX	ENST00000252211.2|ZKSCAN3|ENSG00000189298.9|zinc finger with KRAB and SCAN domains 3 	ENST00000341464.5|ZKSCAN3|ENSG00000189298.9|zinc finger with KRAB and SCAN domains 3 	ENST00000377255.3|ZKSCAN3|ENSG00000189298.9|zinc finger with KRAB and SCAN domains 3
hg19_v2_chr13_-_36050819_36050834	0.0342076	SHOX	ENST00000379919.4|MAB21L1|ENSG00000180660.6|mab-21-like 1 (C. elegans)
hg19_v2_chr9_-_16253112_16253112	0.0341958	SHOX	ENST00000380683.1|C9orf92|ENSG00000205549.4|chromosome 9 open reading frame 92
hg19_v2_chr2_-_227050079_227050093	0.034091	SHOX	ENST00000423838.1|AC068138.1|ENSG00000235070.3|AC068138.1
hg19_v2_chr1_+_107683436_107683476	0.0340474	SHOX	ENST00000370068.1|NTNG1|ENSG00000162631.14|netrin G1
hg19_v2_chr6_+_12007897_12007910	0.0339034	SHOX	ENST00000437559.1|RP11-456H18.2|ENSG00000229896.2|RP11-456H18.2
hg19_v2_chr1_+_186265399_186265414	0.0336456	SHOX	ENST00000367486.3|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367484.3|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000533951.1|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367482.4|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367483.4|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367485.4|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000445192.2|PRG4|ENSG00000116690.7|proteoglycan 4
hg19_v2_chr11_-_128894053_128894123	0.032943	SHOX	ENST00000392657.3|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chrX_-_110655306_110655330	0.0327766	SHOX	ENST00000371993.2|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr15_+_48483736_48483962	0.0327477	SHOX	ENST00000417307.2|CTXN2|ENSG00000233932.3|cortexin 2 	ENST00000559641.1|SLC12A1|ENSG00000074803.13|solute carrier family 12 (sodium/potassium/chloride transporter), member 1
hg19_v2_chr17_-_40337470_40337470	0.0324209	SHOX	ENST00000293330.1|HCRT|ENSG00000161610.1|hypocretin (orexin) neuropeptide precursor
hg19_v2_chr13_-_99667960_99668068	0.0317258	SHOX	ENST00000448493.2|DOCK9|ENSG00000088387.13|dedicator of cytokinesis 9
hg19_v2_chr12_-_118797475_118797527	0.0314961	SHOX	ENST00000541786.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000419821.2|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000541878.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr1_-_151762943_151763012	0.0313379	SHOX	ENST00000368825.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368823.1|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000458431.2|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368827.6|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368824.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing
hg19_v2_chr8_+_92261516_92261555	0.0311116	SHOX	ENST00000276609.3|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7 	ENST00000309536.2|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7
hg19_v2_chrX_+_139791917_139791938	0.0310894	SHOX	ENST00000607004.1|LINC00632|ENSG00000203930.6|long intergenic non-protein coding RNA 632 	ENST00000370535.3|LINC00632|ENSG00000203930.6|long intergenic non-protein coding RNA 632
hg19_v2_chr4_-_89951028_89951062	0.0305843	SHOX	ENST00000506913.1|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr11_+_62496114_62496322	0.0305305	SHOX	ENST00000532583.1|TTC9C|ENSG00000162222.9|tetratricopeptide repeat domain 9C
hg19_v2_chr13_-_99630233_99630348	0.0303183	SHOX	ENST00000376460.1|DOCK9|ENSG00000088387.13|dedicator of cytokinesis 9 	ENST00000442173.1|DOCK9|ENSG00000088387.13|dedicator of cytokinesis 9
hg19_v2_chr7_-_151217166_151217206	0.0302868	SHOX	ENST00000496004.1|RHEB|ENSG00000106615.5|Ras homolog enriched in brain
hg19_v2_chr15_+_58430368_58430401	0.0302103	SHOX	ENST00000558772.1|AQP9|ENSG00000103569.5|aquaporin 9 	ENST00000219919.4|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr4_-_41884582_41884593	0.0302068	SHOX	ENST00000499082.2|LINC00682|ENSG00000245870.2|long intergenic non-protein coding RNA 682
hg19_v2_chr18_+_22040593_22040616	0.0301346	SHOX	ENST00000256906.4|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr4_-_140544386_140544413	0.0294429	SHOX	ENST00000561977.1|RP11-308D13.3|ENSG00000261268.1|RP11-308D13.3
hg19_v2_chr11_-_18211042_18211042	0.029399	SHOX	ENST00000527671.1|RP11-113D6.6|ENSG00000255470.1|Uncharacterized protein
hg19_v2_chr5_-_59783882_59783910	0.02929	SHOX	ENST00000505507.2|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific 	ENST00000502484.2|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr3_+_69985792_69985874	0.0292336	SHOX	ENST00000531774.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr7_-_151217001_151217019	0.029179	SHOX	ENST00000262187.5|RHEB|ENSG00000106615.5|Ras homolog enriched in brain
hg19_v2_chrX_-_18690210_18690230	0.0289299	SHOX	ENST00000379984.3|RS1|ENSG00000102104.8|retinoschisin 1
hg19_v2_chr4_-_69111401_69111438	0.0286391	SHOX	ENST00000332644.5|TMPRSS11B|ENSG00000185873.7|transmembrane protease, serine 11B
hg19_v2_chr4_+_110749143_110749155	0.0286145	SHOX	ENST00000317735.4|RRH|ENSG00000180245.4|retinal pigment epithelium-derived rhodopsin homolog
hg19_v2_chr4_-_74486347_74486348	0.0285653	SHOX	ENST00000342081.3|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr10_-_50970322_50970381	0.0285527	SHOX	ENST00000374103.4|OGDHL|ENSG00000197444.5|oxoglutarate dehydrogenase-like
hg19_v2_chr9_-_16728161_16728212	0.0285445	SHOX	ENST00000603713.1|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000603313.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr8_-_10512569_10512612	0.0276964	SHOX	ENST00000382483.3|RP1L1|ENSG00000183638.5|retinitis pigmentosa 1-like 1
hg19_v2_chr12_+_12938541_12938600	0.0273064	SHOX	ENST00000356591.4|APOLD1|ENSG00000178878.8|apolipoprotein L domain containing 1
hg19_v2_chr8_+_117950422_117950468	0.0272231	SHOX	ENST00000378279.3|AARD|ENSG00000205002.3|alanine and arginine rich domain containing protein
hg19_v2_chr4_+_41614720_41614734	0.0270428	SHOX	ENST00000509277.1|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1
hg19_v2_chr12_-_6233828_6233843	0.0270012	SHOX	ENST00000572068.1|VWF|ENSG00000110799.9|von Willebrand factor 	ENST00000261405.5|VWF|ENSG00000110799.9|von Willebrand factor
hg19_v2_chr16_+_68119324_68119364	0.0269622	SHOX	ENST00000349223.5|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
hg19_v2_chr2_-_136633940_136634022	0.0268882	SHOX	ENST00000264156.2|MCM6|ENSG00000076003.4|minichromosome maintenance complex component 6
hg19_v2_chr1_+_107683644_107683673	0.0268432	SHOX	ENST00000370067.1|NTNG1|ENSG00000162631.14|netrin G1
hg19_v2_chr12_-_31479107_31479142	0.0267797	SHOX	ENST00000542983.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr3_+_182971018_182971059	0.0266245	SHOX	ENST00000326505.3|B3GNT5|ENSG00000176597.7|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v2_chr3_+_15045419_15045433	0.0264628	SHOX	ENST00000406272.2|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2
hg19_v2_chr3_-_79816965_79817094	0.0263196	SHOX	ENST00000464233.1|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr2_-_111334678_111334762	0.0262953	SHOX	ENST00000329516.3|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000330331.5|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000446930.1|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6
hg19_v2_chr17_-_39211463_39211482	0.0261097	SHOX	ENST00000542910.1|KRTAP2-2|ENSG00000214518.3|keratin associated protein 2-2 	ENST00000398477.1|KRTAP2-2|ENSG00000214518.3|keratin associated protein 2-2
hg19_v2_chr18_-_3219847_3219879	0.0256068	SHOX	ENST00000261606.7|MYOM1|ENSG00000101605.8|myomesin 1
hg19_v2_chr18_-_31803435_31803515	0.0254935	SHOX	ENST00000589544.1|NOL4|ENSG00000101746.11|nucleolar protein 4 	ENST00000269185.4|NOL4|ENSG00000101746.11|nucleolar protein 4 	ENST00000261592.5|NOL4|ENSG00000101746.11|nucleolar protein 4
hg19_v2_chr7_-_22234381_22234430	0.0252953	SHOX	ENST00000458533.1|RAPGEF5|ENSG00000136237.14|Rap guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr12_-_122018114_122018137	0.0252704	SHOX	ENST00000539394.1|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B
hg19_v2_chr1_-_45956868_45956883	0.0251335	SHOX	ENST00000451835.2|TESK2|ENSG00000070759.12|testis-specific kinase 2
hg19_v2_chr19_-_36001113_36001196	0.0250831	SHOX	ENST00000434389.1|DMKN|ENSG00000161249.16|dermokine
hg19_v2_chr2_+_159825143_159825190	0.0250047	SHOX	ENST00000454300.1|TANC1|ENSG00000115183.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 	ENST00000263635.6|TANC1|ENSG00000115183.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
hg19_v2_chr12_-_31478428_31478469	0.0249985	SHOX	ENST00000543615.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr3_+_130569429_130569479	0.0249059	SHOX	ENST00000505330.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000504381.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000507488.2|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000393221.4|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr6_+_155538093_155538109	0.0247763	SHOX	ENST00000462408.2|TIAM2|ENSG00000146426.13|T-cell lymphoma invasion and metastasis 2
hg19_v2_chr2_-_203735484_203735539	0.024425	SHOX	ENST00000420558.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000418208.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like
hg19_v2_chr18_+_57567180_57567248	0.0244005	SHOX	ENST00000316660.6|PMAIP1|ENSG00000141682.11|phorbol-12-myristate-13-acetate-induced protein 1 	ENST00000269518.9|PMAIP1|ENSG00000141682.11|phorbol-12-myristate-13-acetate-induced protein 1
hg19_v2_chrM_+_7586_7655	0.0243839	SHOX	ENST00000361739.1|MT-CO2|ENSG00000198712.1|mitochondrially encoded cytochrome c oxidase II
hg19_v2_chr6_-_39693111_39693217	0.0242214	SHOX	ENST00000373215.3|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000538893.1|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000287152.7|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000373216.3|KIF6|ENSG00000164627.13|kinesin family member 6
hg19_v2_chr7_-_14028488_14028516	0.0241991	SHOX	ENST00000405358.4|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr10_+_119301928_119301955	0.0241019	SHOX	ENST00000553456.3|EMX2|ENSG00000170370.10|empty spiracles homeobox 2
hg19_v2_chr14_+_72052983_72053003	0.0240161	SHOX	ENST00000358550.2|SIPA1L1|ENSG00000197555.5|signal-induced proliferation-associated 1 like 1
hg19_v2_chr16_+_14280564_14280586	0.0238295	SHOX	ENST00000572567.1|MKL2|ENSG00000186260.12|MKL/myocardin-like 2
hg19_v2_chrX_-_77150985_77151090	0.0238206	SHOX	ENST00000358075.6|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr15_-_55563072_55563135	0.0236276	SHOX	ENST00000567380.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family 	ENST00000565972.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family 	ENST00000569493.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr12_+_122688090_122688284	0.0236259	SHOX	ENST00000324189.4|B3GNT4|ENSG00000176383.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 	ENST00000546192.1|B3GNT4|ENSG00000176383.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
hg19_v2_chr1_+_160370344_160370406	0.023529	SHOX	ENST00000368061.2|VANGL2|ENSG00000162738.5|VANGL planar cell polarity protein 2
hg19_v2_chr7_-_28220354_28220441	0.0235038	SHOX	ENST00000283928.5|JAZF1|ENSG00000153814.7|JAZF zinc finger 1
hg19_v2_chr11_-_108093329_108093375	0.0229668	SHOX	ENST00000278612.8|NPAT|ENSG00000149308.12|nuclear protein, ataxia-telangiectasia locus
hg19_v2_chr12_-_49245916_49245932	0.0225855	SHOX	ENST00000552512.1|DDX23|ENSG00000174243.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 	ENST00000551468.1|DDX23|ENSG00000174243.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
hg19_v2_chrX_-_153602991_153603011	0.0225112	SHOX	ENST00000369850.3|FLNA|ENSG00000196924.10|filamin A, alpha 	ENST00000422373.1|FLNA|ENSG00000196924.10|filamin A, alpha
hg19_v2_chrM_+_10758_10771	0.0224491	SHOX	ENST00000361381.2|MT-ND4|ENSG00000198886.2|mitochondrially encoded NADH dehydrogenase 4
hg19_v2_chr2_-_136678123_136678165	0.0223822	SHOX	ENST00000422708.1|DARS|ENSG00000115866.6|aspartyl-tRNA synthetase
hg19_v2_chr12_-_54653313_54653416	0.0222474	SHOX	ENST00000550411.1|CBX5|ENSG00000094916.9|chromobox homolog 5 	ENST00000439541.2|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr4_-_143226979_143226990	0.0220374	SHOX	ENST00000514525.1|INPP4B|ENSG00000109452.8|inositol polyphosphate-4-phosphatase, type II, 105kDa
hg19_v2_chr12_-_53171128_53171131	0.0218715	SHOX	ENST00000332411.2|KRT76|ENSG00000185069.2|keratin 76
hg19_v2_chr3_+_120626919_120627161	0.021187	SHOX	ENST00000273666.6|STXBP5L|ENSG00000145087.8|syntaxin binding protein 5-like 	ENST00000471454.1|STXBP5L|ENSG00000145087.8|syntaxin binding protein 5-like 	ENST00000472879.1|STXBP5L|ENSG00000145087.8|syntaxin binding protein 5-like 	ENST00000497029.1|STXBP5L|ENSG00000145087.8|syntaxin binding protein 5-like 	ENST00000492541.1|STXBP5L|ENSG00000145087.8|syntaxin binding protein 5-like
hg19_v2_chr8_+_21899898_21899937	0.0207058	SHOX	ENST00000518533.1|FGF17|ENSG00000158815.6|fibroblast growth factor 17 	ENST00000359441.3|FGF17|ENSG00000158815.6|fibroblast growth factor 17
hg19_v2_chr12_+_104680659_104680777	0.0206053	SHOX	ENST00000526691.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000531691.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000388854.3|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000354940.6|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000526390.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000531689.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1
hg19_v2_chr14_-_54425475_54425500	0.0205608	SHOX	ENST00000559642.1|BMP4|ENSG00000125378.11|bone morphogenetic protein 4
hg19_v2_chrX_+_107288197_107288212	0.0203262	SHOX	ENST00000415430.3|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chrX_+_100224676_100224701	0.0200435	SHOX	ENST00000450049.2|ARL13A|ENSG00000174225.10|ADP-ribosylation factor-like 13A
hg19_v2_chr8_-_116681686_116681710	0.0194182	SHOX	ENST00000519815.1|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr6_-_49681235_49681274	0.0193049	SHOX	ENST00000339139.4|CRISP2|ENSG00000124490.9|cysteine-rich secretory protein 2
hg19_v2_chr3_-_114790179_114790222	0.0192945	SHOX	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr6_+_135502501_135502652	0.0192446	SHOX	ENST00000527615.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000420123.2|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000525369.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000528774.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000534121.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000534044.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000533624.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr7_-_44580861_44580914	0.0191987	SHOX	ENST00000546276.1|NPC1L1|ENSG00000015520.10|NPC1-like 1 	ENST00000289547.4|NPC1L1|ENSG00000015520.10|NPC1-like 1 	ENST00000381160.3|NPC1L1|ENSG00000015520.10|NPC1-like 1 	ENST00000423141.1|NPC1L1|ENSG00000015520.10|NPC1-like 1
hg19_v2_chr10_+_24497704_24497743	0.0191404	SHOX	ENST00000376456.4|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000458595.1|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr21_-_35284635_35284635	0.0189354	SHOX	ENST00000429238.1|AP000304.12|ENSG00000249209.1|AP000304.12
hg19_v2_chr4_+_74576019_74576088	0.0188416	SHOX	ENST00000436089.1|AC112518.3|ENSG00000228277.1|AC112518.3
hg19_v2_chr2_+_162272605_162272753	0.0187457	SHOX	ENST00000389554.3|TBR1|ENSG00000136535.10|T-box, brain, 1
hg19_v2_chr2_-_207024233_207024327	0.0187391	SHOX	ENST00000423725.1|NDUFS1|ENSG00000023228.9|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) 	ENST00000233190.6|NDUFS1|ENSG00000023228.9|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
hg19_v2_chr3_-_187009798_187009812	0.0185125	SHOX	ENST00000337774.5|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
hg19_v2_chr5_+_66300446_66300463	0.0181741	SHOX	ENST00000261569.7|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr16_+_68119247_68119293	0.0181239	SHOX	ENST00000575270.1|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
hg19_v2_chr6_+_4087664_4087683	0.0180254	SHOX	ENST00000430835.2|C6orf201|ENSG00000185689.11|chromosome 6 open reading frame 201
hg19_v2_chr7_-_111424462_111424496	0.0179175	SHOX	ENST00000437129.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr3_-_62359180_62359202	0.0178879	SHOX	ENST00000283268.3|FEZF2|ENSG00000153266.8|FEZ family zinc finger 2
hg19_v2_chr17_-_9929581_9929626	0.0177356	SHOX	ENST00000437099.2|GAS7|ENSG00000007237.14|growth arrest-specific 7 	ENST00000396115.2|GAS7|ENSG00000007237.14|growth arrest-specific 7
hg19_v2_chr11_-_77532050_77532066	0.0174362	SHOX	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr1_+_160160346_160160401	0.0173964	SHOX	ENST00000368078.3|CASQ1|ENSG00000143318.8|calsequestrin 1 (fast-twitch, skeletal muscle)
hg19_v2_chrX_+_135388147_135388181	0.0172719	SHOX	ENST00000394141.1|GPR112|ENSG00000156920.6|G protein-coupled receptor 112
hg19_v2_chr1_+_160160283_160160292	0.0172184	SHOX	ENST00000368079.3|CASQ1|ENSG00000143318.8|calsequestrin 1 (fast-twitch, skeletal muscle)
hg19_v2_chr4_+_71458012_71458019	0.0171663	SHOX	ENST00000449493.2|AMBN|ENSG00000178522.10|ameloblastin (enamel matrix protein)
hg19_v2_chr20_-_50418947_50418964	0.0171197	SHOX	ENST00000371539.3|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr8_-_18541603_18541650	0.0170778	SHOX	ENST00000428502.2|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr21_-_35899113_35899261	0.0165466	SHOX	ENST00000492600.1|RCAN1|ENSG00000159200.13|regulator of calcineurin 1 	ENST00000481448.1|RCAN1|ENSG00000159200.13|regulator of calcineurin 1 	ENST00000381132.2|RCAN1|ENSG00000159200.13|regulator of calcineurin 1
hg19_v2_chr3_-_114173530_114173571	0.0164991	SHOX	ENST00000470311.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr3_+_130569592_130569620	0.0159299	SHOX	ENST00000533801.2|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr8_-_74495065_74495088	0.0158782	SHOX	ENST00000523533.1|STAU2|ENSG00000040341.13|staufen double-stranded RNA binding protein 2
hg19_v2_chr13_-_41593425_41593480	0.0158426	SHOX	ENST00000239882.3|ELF1|ENSG00000120690.9|E74-like factor 1 (ets domain transcription factor)
hg19_v2_chr22_-_28490123_28490123	0.0158215	SHOX	ENST00000442232.1|TTC28|ENSG00000100154.10|tetratricopeptide repeat domain 28
hg19_v2_chr17_-_62499334_62499553	0.015805	SHOX	ENST00000579996.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr12_+_7014126_7014192	0.0156148	SHOX	ENST00000415834.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23 	ENST00000436789.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr12_-_53730147_53730177	0.0154173	SHOX	ENST00000536324.2|SP7|ENSG00000170374.4|Sp7 transcription factor
hg19_v2_chr2_-_65593784_65593817	0.0153362	SHOX	ENST00000443619.2|SPRED2|ENSG00000198369.5|sprouty-related, EVH1 domain containing 2
hg19_v2_chr4_+_159727272_159727400	0.0151358	SHOX	ENST00000379346.3|FNIP2|ENSG00000052795.8|folliculin interacting protein 2
hg19_v2_chr4_+_71457970_71457974	0.0148943	SHOX	ENST00000322937.6|AMBN|ENSG00000178522.10|ameloblastin (enamel matrix protein)
hg19_v2_chr14_+_20187174_20187174	0.0144843	SHOX	ENST00000557414.1|OR4N2|ENSG00000176294.3|olfactory receptor, family 4, subfamily N, member 2
hg19_v2_chr11_+_123430948_123431017	0.0141597	SHOX	ENST00000529432.1|GRAMD1B|ENSG00000023171.10|GRAM domain containing 1B 	ENST00000534764.1|GRAMD1B|ENSG00000023171.10|GRAM domain containing 1B
hg19_v2_chr10_+_123951957_123951980	0.0140493	SHOX	ENST00000514539.1|TACC2|ENSG00000138162.13|transforming, acidic coiled-coil containing protein 2
hg19_v2_chr2_+_87135076_87135076	0.0139926	SHOX	ENST00000409776.2|RGPD1|ENSG00000187627.10|RANBP2-like and GRIP domain containing 1
hg19_v2_chr11_+_128563652_128563689	0.0139636	SHOX	ENST00000527786.2|FLI1|ENSG00000151702.12|Fli-1 proto-oncogene, ETS transcription factor
hg19_v2_chrM_+_10464_10480	0.0139495	SHOX	ENST00000361335.1|MT-ND4L|ENSG00000212907.2|mitochondrially encoded NADH dehydrogenase 4L
hg19_v2_chr1_+_74701062_74701099	0.0139232	SHOX	ENST00000326637.3|TNNI3K|ENSG00000116783.10|TNNI3 interacting kinase
hg19_v2_chr2_-_30144432_30144457	0.0138855	SHOX	ENST00000389048.3|ALK|ENSG00000171094.11|anaplastic lymphoma receptor tyrosine kinase
hg19_v2_chr1_-_151431909_151431987	0.013869	SHOX	ENST00000361398.3|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000271715.2|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain
hg19_v2_chr1_-_31666767_31666767	0.0136457	SHOX	ENST00000530145.1|NKAIN1|ENSG00000084628.5|Na+/K+ transporting ATPase interacting 1
hg19_v2_chr10_-_50970382_50970425	0.0136369	SHOX	ENST00000419399.1|OGDHL|ENSG00000197444.5|oxoglutarate dehydrogenase-like 	ENST00000432695.1|OGDHL|ENSG00000197444.5|oxoglutarate dehydrogenase-like
hg19_v2_chr18_+_50278430_50278542	0.0136269	SHOX	ENST00000578080.1|DCC|ENSG00000187323.7|deleted in colorectal carcinoma 	ENST00000582875.1|DCC|ENSG00000187323.7|deleted in colorectal carcinoma 	ENST00000412726.1|DCC|ENSG00000187323.7|deleted in colorectal carcinoma
hg19_v2_chr2_+_109204743_109204855	0.0135891	SHOX	ENST00000332345.6|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr6_-_116833500_116833511	0.0134752	SHOX	ENST00000356128.4|TRAPPC3L|ENSG00000173626.5|trafficking protein particle complex 3-like
hg19_v2_chr4_-_109541539_109541585	0.0130586	SHOX	ENST00000509984.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head) 	ENST00000507248.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head) 	ENST00000506795.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head)
hg19_v2_chr13_-_95131923_95131944	0.0129585	SHOX	ENST00000377028.5|DCT|ENSG00000080166.11|dopachrome tautomerase 	ENST00000446125.1|DCT|ENSG00000080166.11|dopachrome tautomerase
hg19_v2_chr7_-_14942944_14942997	0.0129377	SHOX	ENST00000403951.2|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa
hg19_v2_chr19_-_46088068_46088100	0.0128515	SHOX	ENST00000263275.4|OPA3|ENSG00000125741.4|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia) 	ENST00000323060.3|OPA3|ENSG00000125741.4|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
hg19_v2_chr14_+_67831576_67831615	0.0128487	SHOX	ENST00000555876.1|EIF2S1|ENSG00000134001.8|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v2_chr3_-_157221128_157221216	0.0127211	SHOX	ENST00000392833.2|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1 	ENST00000362010.2|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1
hg19_v2_chr8_+_107738343_107738413	0.0127029	SHOX	ENST00000521592.1|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chr17_+_39382900_39382907	0.0124963	SHOX	ENST00000377721.3|KRTAP9-2|ENSG00000239886.2|keratin associated protein 9-2 	ENST00000455970.2|KRTAP9-2|ENSG00000239886.2|keratin associated protein 9-2
hg19_v2_chr6_+_105404899_105404931	0.0124082	SHOX	ENST00000345080.4|LIN28B|ENSG00000187772.6|lin-28 homolog B (C. elegans)
hg19_v2_chr1_+_167298281_167298319	0.0123443	SHOX	ENST00000367862.5|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1
hg19_v2_chr3_+_115342349_115342373	0.0117923	SHOX	ENST00000393780.3|GAP43|ENSG00000172020.8|growth associated protein 43
hg19_v2_chr20_-_33735070_33735175	0.0116814	SHOX	ENST00000374491.3|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2 	ENST00000542871.1|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2 	ENST00000374492.3|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2
hg19_v2_chr18_-_3220106_3220208	0.01165	SHOX	ENST00000356443.4|MYOM1|ENSG00000101605.8|myomesin 1 	ENST00000400569.3|MYOM1|ENSG00000101605.8|myomesin 1
hg19_v2_chr7_+_141408153_141408153	0.0115943	SHOX	ENST00000397541.2|WEE2|ENSG00000214102.3|WEE1 homolog 2 (S. pombe)
hg19_v2_chr14_+_101359265_101359265	0.0115196	SHOX	ENST00000599197.1|AL117190.3|ENSG00000269375.1|Esophagus cancer-related gene-2 interaction susceptibility protein; Uncharacterized protein
hg19_v2_chr1_+_244515930_244515950	0.0115126	SHOX	ENST00000366537.1|C1orf100|ENSG00000173728.6|chromosome 1 open reading frame 100 	ENST00000308105.4|C1orf100|ENSG00000173728.6|chromosome 1 open reading frame 100
hg19_v2_chr16_+_72459838_72459857	0.0110881	SHOX	ENST00000564508.1|AC004158.3|ENSG00000260664.1|AC004158.3
hg19_v2_chr2_+_210636697_210636763	0.0109718	SHOX	ENST00000439458.1|UNC80|ENSG00000144406.14|unc-80 homolog (C. elegans) 	ENST00000272845.6|UNC80|ENSG00000144406.14|unc-80 homolog (C. elegans)
hg19_v2_chr4_+_41614909_41614926	0.0108805	SHOX	ENST00000509454.1|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1 	ENST00000396595.3|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1 	ENST00000381753.4|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1
hg19_v2_chr11_+_33061543_33061585	0.0107981	SHOX	ENST00000432887.1|TCP11L1|ENSG00000176148.11|t-complex 11, testis-specific-like 1 	ENST00000528898.1|TCP11L1|ENSG00000176148.11|t-complex 11, testis-specific-like 1 	ENST00000531632.2|TCP11L1|ENSG00000176148.11|t-complex 11, testis-specific-like 1
hg19_v2_chr17_+_18086392_18086434	0.0105107	SHOX	ENST00000541285.1|ALKBH5|ENSG00000091542.8|alkB, alkylation repair homolog 5 (E. coli)
hg19_v2_chr9_+_470288_470336	0.0104393	SHOX	ENST00000382303.1|KANK1|ENSG00000107104.14|KN motif and ankyrin repeat domains 1
hg19_v2_chr19_+_30719410_30719461	0.0103383	SHOX	ENST00000585628.1|ZNF536|ENSG00000198597.4|zinc finger protein 536 	ENST00000591488.1|ZNF536|ENSG00000198597.4|zinc finger protein 536
hg19_v2_chr8_-_116504448_116504481	0.0101214	SHOX	ENST00000518018.1|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr15_-_55562582_55562617	0.010098	SHOX	ENST00000396307.2|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr14_-_78083112_78083140	0.0100092	SHOX	ENST00000216484.2|SPTLC2|ENSG00000100596.2|serine palmitoyltransferase, long chain base subunit 2
hg19_v2_chr18_-_21977748_21977823	0.00989755	SHOX	ENST00000399441.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A 	ENST00000319481.3|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr12_-_22063787_22063912	0.00974793	SHOX	ENST00000544039.1|ABCC9|ENSG00000069431.6|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
hg19_v2_chr12_-_16758059_16758088	0.0096954	SHOX	ENST00000261169.6|LMO3|ENSG00000048540.10|LIM domain only 3 (rhombotin-like 2)
hg19_v2_chr1_+_66458072_66458109	0.00955639	SHOX	ENST00000423207.2|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific
hg19_v2_chr6_+_26402517_26402535	0.00952249	SHOX	ENST00000414912.2|BTN3A1|ENSG00000026950.12|butyrophilin, subfamily 3, member A1
hg19_v2_chr17_-_39222131_39222131	0.00944969	SHOX	ENST00000394015.2|KRTAP2-4|ENSG00000213417.2|keratin associated protein 2-4
hg19_v2_chr14_+_59100774_59100799	0.00938712	SHOX	ENST00000556859.1|DACT1|ENSG00000165617.10|dishevelled-binding antagonist of beta-catenin 1 	ENST00000421793.1|DACT1|ENSG00000165617.10|dishevelled-binding antagonist of beta-catenin 1
hg19_v2_chr16_+_24741013_24741058	0.00915588	SHOX	ENST00000315183.7|TNRC6A|ENSG00000090905.13|trinucleotide repeat containing 6A 	ENST00000395799.3|TNRC6A|ENSG00000090905.13|trinucleotide repeat containing 6A
hg19_v2_chr7_-_87342564_87342617	0.00893538	SHOX	ENST00000265724.3|ABCB1|ENSG00000085563.10|ATP-binding cassette, sub-family B (MDR/TAP), member 1 	ENST00000416177.1|ABCB1|ENSG00000085563.10|ATP-binding cassette, sub-family B (MDR/TAP), member 1
hg19_v2_chr7_+_49813255_49813269	0.00877639	SHOX	ENST00000340652.4|VWC2|ENSG00000188730.4|von Willebrand factor C domain containing 2
hg19_v2_chrX_-_20236970_20237027	0.00863337	SHOX	ENST00000379548.4|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr4_+_95916947_95917006	0.00862356	SHOX	ENST00000506363.1|BMPR1B|ENSG00000138696.6|bone morphogenetic protein receptor, type IB
hg19_v2_chr4_+_114214125_114214151	0.00853638	SHOX	ENST00000509550.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal
hg19_v2_chr5_+_66300464_66300505	0.00848922	SHOX	ENST00000436277.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr12_+_41136144_41136158	0.0084519	SHOX	ENST00000548005.1|CNTN1|ENSG00000018236.10|contactin 1 	ENST00000552248.1|CNTN1|ENSG00000018236.10|contactin 1
hg19_v2_chr18_-_500692_500748	0.00802874	SHOX	ENST00000400256.3|COLEC12|ENSG00000158270.10|collectin sub-family member 12
hg19_v2_chr8_-_116681221_116681236	0.00800572	SHOX	ENST00000395715.3|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr10_-_56561022_56561051	0.00791541	SHOX	ENST00000373965.2|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000414778.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395438.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000409834.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395445.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395446.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395442.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395440.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395432.2|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000361849.3|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395433.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000320301.6|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395430.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000437009.1|PCDH15|ENSG00000150275.13|protocadherin-related 15
hg19_v2_chrX_-_153599578_153599656	0.0078935	SHOX	ENST00000360319.4|FLNA|ENSG00000196924.10|filamin A, alpha 	ENST00000344736.4|FLNA|ENSG00000196924.10|filamin A, alpha
hg19_v2_chr4_-_143227088_143227105	0.00777757	SHOX	ENST00000511838.1|INPP4B|ENSG00000109452.8|inositol polyphosphate-4-phosphatase, type II, 105kDa
hg19_v2_chr1_+_214161272_214161322	0.00776028	SHOX	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr12_-_110937351_110937445	0.00758602	SHOX	ENST00000552130.2|VPS29|ENSG00000111237.14|vacuolar protein sorting 29 homolog (S. cerevisiae)
hg19_v2_chr14_+_29236269_29236287	0.00749165	SHOX	ENST00000313071.4|FOXG1|ENSG00000176165.7|forkhead box G1
hg19_v2_chr10_+_13628933_13629012	0.00744797	SHOX	ENST00000417658.1|PRPF18|ENSG00000165630.9|pre-mRNA processing factor 18 	ENST00000320054.4|PRPF18|ENSG00000165630.9|pre-mRNA processing factor 18
hg19_v2_chr12_-_53730126_53730146	0.00741447	SHOX	ENST00000537210.2|SP7|ENSG00000170374.4|Sp7 transcription factor
hg19_v2_chr13_-_28545276_28545276	0.00738141	SHOX	ENST00000381020.7|CDX2|ENSG00000165556.9|caudal type homeobox 2
hg19_v2_chr9_+_125132803_125132835	0.00722566	SHOX	ENST00000540753.1|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chrX_-_15332665_15332693	0.00717055	SHOX	ENST00000537676.1|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11 	ENST00000344384.4|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11
hg19_v2_chr4_+_159727222_159727266	0.00708445	SHOX	ENST00000512986.1|FNIP2|ENSG00000052795.8|folliculin interacting protein 2
hg19_v2_chr8_+_26150628_26150749	0.00688103	SHOX	ENST00000523925.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000315985.7|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chr8_+_105235572_105235610	0.00671592	SHOX	ENST00000523362.1|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2
hg19_v2_chr4_-_87770416_87770508	0.00663889	SHOX	ENST00000273905.6|SLC10A6|ENSG00000145283.7|solute carrier family 10 (sodium/bile acid cotransporter), member 6
hg19_v2_chr1_+_174844645_174844684	0.00654363	SHOX	ENST00000486220.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr4_-_20985632_20985664	0.00628384	SHOX	ENST00000359001.5|KCNIP4|ENSG00000185774.10|Kv channel interacting protein 4
hg19_v2_chr7_-_78400598_78400654	0.00614054	SHOX	ENST00000536571.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr3_-_101039402_101039429	0.00612165	SHOX	ENST00000193391.7|IMPG2|ENSG00000081148.11|interphotoreceptor matrix proteoglycan 2
hg19_v2_chr14_-_98444461_98444480	0.00606587	SHOX	ENST00000499006.2|C14orf64|ENSG00000246223.4|chromosome 14 open reading frame 64
hg19_v2_chr14_-_38028689_38028726	0.00603739	SHOX	ENST00000553425.1|RP11-356O9.2|ENSG00000259087.1|RP11-356O9.2
hg19_v2_chr1_+_61548225_61548299	0.00599968	SHOX	ENST00000371187.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr17_+_39411636_39411636	0.00585881	SHOX	ENST00000394008.1|KRTAP9-9|ENSG00000198083.7|keratin associated protein 9-9
hg19_v2_chr2_+_68961934_68961975	0.00565978	SHOX	ENST00000409202.3|ARHGAP25|ENSG00000163219.7|Rho GTPase activating protein 25
hg19_v2_chr14_-_54423529_54423552	0.00560291	SHOX	ENST00000245451.4|BMP4|ENSG00000125378.11|bone morphogenetic protein 4 	ENST00000559087.1|BMP4|ENSG00000125378.11|bone morphogenetic protein 4
hg19_v2_chr3_+_111393501_111393538	0.00541286	SHOX	ENST00000393934.3|PLCXD2|ENSG00000240891.2|phosphatidylinositol-specific phospholipase C, X domain containing 2
hg19_v2_chr1_-_36020531_36020588	0.00532322	SHOX	ENST00000440579.1|KIAA0319L|ENSG00000142687.13|KIAA0319-like 	ENST00000494948.1|KIAA0319L|ENSG00000142687.13|KIAA0319-like
hg19_v2_chr4_-_184243561_184243579	0.00504692	SHOX	ENST00000514470.1|CLDN24|ENSG00000185758.7|claudin 24 	ENST00000541814.1|CLDN24|ENSG00000185758.7|claudin 24
hg19_v2_chr7_-_104909435_104909535	0.00502542	SHOX	ENST00000357311.3|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr1_+_180601139_180601180	0.00497577	SHOX	ENST00000367590.4|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1 	ENST00000367589.3|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1
hg19_v2_chr2_-_163695128_163695158	0.0049583	SHOX	ENST00000332142.5|KCNH7|ENSG00000184611.7|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg19_v2_chr19_+_54641444_54641504	0.00491314	SHOX	ENST00000221232.5|CNOT3|ENSG00000088038.13|CCR4-NOT transcription complex, subunit 3 	ENST00000358389.3|CNOT3|ENSG00000088038.13|CCR4-NOT transcription complex, subunit 3
hg19_v2_chr5_+_166711804_166711843	0.00478155	SHOX	ENST00000518659.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2 	ENST00000545108.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2
hg19_v2_chr2_+_176987088_176987088	0.00477476	SHOX	ENST00000249499.6|HOXD9|ENSG00000128709.10|homeobox D9
hg19_v2_chr6_-_49604545_49604560	0.00475939	SHOX	ENST00000371175.4|RHAG|ENSG00000112077.11|Rh-associated glycoprotein 	ENST00000229810.7|RHAG|ENSG00000112077.11|Rh-associated glycoprotein
hg19_v2_chr19_+_13135386_13135435	0.00457843	SHOX	ENST00000360105.4|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000588228.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000591028.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr2_+_68961905_68961932	0.00433382	SHOX	ENST00000295381.3|ARHGAP25|ENSG00000163219.7|Rho GTPase activating protein 25
hg19_v2_chr6_+_5261225_5261277	0.00419882	SHOX	ENST00000324331.6|FARS2|ENSG00000145982.7|phenylalanyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr1_-_151431674_151431691	0.0040928	SHOX	ENST00000531094.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain
hg19_v2_chr10_+_119302508_119302559	0.00401511	SHOX	ENST00000442245.4|EMX2|ENSG00000170370.10|empty spiracles homeobox 2
hg19_v2_chr18_-_33709268_33709380	0.0039537	SHOX	ENST00000269187.5|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6 	ENST00000590986.1|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6 	ENST00000440549.2|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6
hg19_v2_chr1_-_159832438_159832449	0.00388428	SHOX	ENST00000368100.1|VSIG8|ENSG00000243284.1|V-set and immunoglobulin domain containing 8
hg19_v2_chr5_+_119867159_119867240	0.00379822	SHOX	ENST00000505123.1|PRR16|ENSG00000184838.10|proline rich 16
hg19_v2_chr2_-_50574856_50574892	0.00378526	SHOX	ENST00000342183.5|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chr18_+_32173276_32173349	0.00369049	SHOX	ENST00000591816.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000588125.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000598334.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000588684.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000554864.3|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000399121.5|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000595022.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000269190.7|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000399097.3|DTNA|ENSG00000134769.17|dystrobrevin, alpha
hg19_v2_chr1_-_151762900_151762910	0.00360135	SHOX	ENST00000440583.2|TDRKH|ENSG00000182134.11|tudor and KH domain containing
hg19_v2_chr18_+_59000815_59000828	0.00349354	SHOX	ENST00000262717.4|CDH20|ENSG00000101542.5|cadherin 20, type 2
hg19_v2_chr4_-_74486217_74486273	0.0034069	SHOX	ENST00000335049.5|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6 	ENST00000307439.5|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr12_+_20963632_20963645	0.003313	SHOX	ENST00000540853.1|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3 	ENST00000261196.2|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3
hg19_v2_chr21_-_35796241_35796268	0.00325548	SHOX	ENST00000450895.1|AP000322.53|ENSG00000243627.4|AP000322.53
hg19_v2_chr3_+_138340049_138340056	0.00323943	SHOX	ENST00000464668.1|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule
hg19_v2_chr10_-_29923893_29923907	0.00286813	SHOX	ENST00000355867.4|SVIL|ENSG00000197321.10|supervillin
hg19_v2_chr3_+_129247479_129247493	0.00280921	SHOX	ENST00000296271.3|RHO|ENSG00000163914.4|rhodopsin
hg19_v2_chr2_-_180610767_180610774	0.00252049	SHOX	ENST00000409343.1|ZNF385B|ENSG00000144331.14|zinc finger protein 385B
hg19_v2_chr5_-_124082279_124082320	0.00243232	SHOX	ENST00000513986.1|ZNF608|ENSG00000168916.11|zinc finger protein 608
hg19_v2_chr2_-_77749336_77749350	0.00228074	SHOX	ENST00000409282.1|LRRTM4|ENSG00000176204.9|leucine rich repeat transmembrane neuronal 4
hg19_v2_chr2_-_166060382_166060411	0.00191379	SHOX	ENST00000409101.3|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr9_-_136933615_136933682	0.00190653	SHOX	ENST00000371834.2|BRD3|ENSG00000169925.12|bromodomain containing 3
hg19_v2_chr3_-_98235962_98236004	0.00164621	SHOX	ENST00000513873.1|CLDND1|ENSG00000080822.12|claudin domain containing 1
hg19_v2_chr12_+_14561422_14561431	0.00146148	SHOX	ENST00000541056.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr3_-_149293990_149294039	0.00126961	SHOX	ENST00000472417.1|WWTR1|ENSG00000018408.10|WW domain containing transcription regulator 1
hg19_v2_chr16_-_18887627_18887627	0.00124712	SHOX	ENST00000563235.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr21_+_30673091_30673135	0.00104332	SHOX	ENST00000447177.1|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr2_-_77749446_77749465	0.00103874	SHOX	ENST00000409911.1|LRRTM4|ENSG00000176204.9|leucine rich repeat transmembrane neuronal 4
hg19_v2_chr14_-_82000140_82000229	0.00100169	SHOX	ENST00000555824.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000557372.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000336735.4|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans)
hg19_v2_chr1_-_94586651_94586733	0.000909608	SHOX	ENST00000535735.1|ABCA4|ENSG00000198691.7|ATP-binding cassette, sub-family A (ABC1), member 4 	ENST00000370225.3|ABCA4|ENSG00000198691.7|ATP-binding cassette, sub-family A (ABC1), member 4
hg19_v2_chr10_+_18629628_18629672	0.000883262	SHOX	ENST00000377329.4|CACNB2|ENSG00000165995.14|calcium channel, voltage-dependent, beta 2 subunit
hg19_v2_chr20_-_50419055_50419066	0.000647681	SHOX	ENST00000217086.4|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr7_-_99716940_99716943	0.000635348	SHOX	ENST00000440225.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr12_-_16761007_16761080	0.000602283	SHOX	ENST00000354662.1|LMO3|ENSG00000048540.10|LIM domain only 3 (rhombotin-like 2) 	ENST00000441439.2|LMO3|ENSG00000048540.10|LIM domain only 3 (rhombotin-like 2)
hg19_v2_chr5_-_20575959_20575997	0.000562902	SHOX	ENST00000507958.1|CDH18|ENSG00000145526.7|cadherin 18, type 2
hg19_v2_chr1_-_11024258_11024258	0.000508815	SHOX	ENST00000418570.2|C1orf127|ENSG00000175262.10|chromosome 1 open reading frame 127
hg19_v2_chr17_+_42785976_42786039	0.000419773	SHOX	ENST00000393547.2|DBF4B|ENSG00000161692.13|DBF4 homolog B (S. cerevisiae) 	ENST00000398338.3|DBF4B|ENSG00000161692.13|DBF4 homolog B (S. cerevisiae)
hg19_v2_chr12_-_91546926_91546972	2.43343e-05	SHOX	ENST00000550758.1|DCN|ENSG00000011465.12|decorin
