hg19_v2_chr8_-_23261589_23261753	0.318668	PAX1_PAX9	ENST00000524168.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2 	ENST00000523833.2|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2 	ENST00000519243.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2 	ENST00000389131.3|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2
hg19_v2_chr8_-_23282797_23282804	0.253513	PAX1_PAX9	ENST00000524144.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2
hg19_v2_chr8_-_23282820_23282846	0.225036	PAX1_PAX9	ENST00000520871.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2
hg19_v2_chr4_+_75230853_75230871	0.170319	PAX1_PAX9	ENST00000244869.2|EREG|ENSG00000124882.3|epiregulin
hg19_v2_chr18_-_47813940_47814021	0.1556	PAX1_PAX9	ENST00000586837.1|CXXC1|ENSG00000154832.10|CXXC finger protein 1 	ENST00000412036.2|CXXC1|ENSG00000154832.10|CXXC finger protein 1 	ENST00000589940.1|CXXC1|ENSG00000154832.10|CXXC finger protein 1
hg19_v2_chr18_-_47814032_47814079	0.150246	PAX1_PAX9	ENST00000589548.1|CXXC1|ENSG00000154832.10|CXXC finger protein 1 	ENST00000591474.1|CXXC1|ENSG00000154832.10|CXXC finger protein 1
hg19_v2_chrX_-_153707545_153707596	0.107438	PAX1_PAX9	ENST00000357360.4|LAGE3|ENSG00000196976.5|L antigen family, member 3
hg19_v2_chr2_+_119699864_119699905	0.0956718	PAX1_PAX9	ENST00000541757.1|MARCO|ENSG00000019169.9|macrophage receptor with collagenous structure 	ENST00000412481.1|MARCO|ENSG00000019169.9|macrophage receptor with collagenous structure
hg19_v2_chrX_-_153707246_153707306	0.0825104	PAX1_PAX9	ENST00000407062.1|LAGE3|ENSG00000196976.5|L antigen family, member 3
hg19_v2_chr20_-_17641097_17641152	0.0669268	PAX1_PAX9	ENST00000246043.4|RRBP1|ENSG00000125844.11|ribosome binding protein 1
hg19_v2_chr11_-_67397371_67397416	0.0568881	PAX1_PAX9	ENST00000376693.2|NUDT8|ENSG00000167799.5|nudix (nucleoside diphosphate linked moiety X)-type motif 8 	ENST00000301490.4|NUDT8|ENSG00000167799.5|nudix (nucleoside diphosphate linked moiety X)-type motif 8
hg19_v2_chr21_-_33104367_33104441	0.0451899	PAX1_PAX9	ENST00000286835.7|SCAF4|ENSG00000156304.10|SR-related CTD-associated factor 4 	ENST00000399804.1|SCAF4|ENSG00000156304.10|SR-related CTD-associated factor 4
hg19_v2_chr4_+_123747979_123747994	0.0451505	PAX1_PAX9	ENST00000608478.1|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr19_-_39104556_39104568	0.0433644	PAX1_PAX9	ENST00000423454.2|MAP4K1|ENSG00000104814.8|mitogen-activated protein kinase kinase kinase kinase 1
hg19_v2_chr7_-_2349579_2349594	0.0414284	PAX1_PAX9	ENST00000435060.1|SNX8|ENSG00000106266.4|sorting nexin 8
hg19_v2_chr7_-_19157248_19157295	0.0414174	PAX1_PAX9	ENST00000242261.5|TWIST1|ENSG00000122691.8|twist family bHLH transcription factor 1
hg19_v2_chr19_-_40791211_40791269	0.0368039	PAX1_PAX9	ENST00000579047.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr19_-_409134_409156	0.0367318	PAX1_PAX9	ENST00000332235.6|C2CD4C|ENSG00000183186.6|C2 calcium-dependent domain containing 4C
hg19_v2_chr5_-_133747551_133747585	0.0360123	PAX1_PAX9	ENST00000395009.3|CDKN2AIPNL|ENSG00000237190.3|CDKN2A interacting protein N-terminal like
hg19_v2_chr18_-_33077556_33077613	0.0315959	PAX1_PAX9	ENST00000589273.1|INO80C|ENSG00000153391.11|INO80 complex subunit C 	ENST00000586489.1|INO80C|ENSG00000153391.11|INO80 complex subunit C
hg19_v2_chr16_+_67197288_67197362	0.0315715	PAX1_PAX9	ENST00000264009.8|HSF4|ENSG00000102878.11|heat shock transcription factor 4 	ENST00000421453.1|HSF4|ENSG00000102878.11|heat shock transcription factor 4
hg19_v2_chr6_-_137366163_137366298	0.0310999	PAX1_PAX9	ENST00000367748.1|IL20RA|ENSG00000016402.8|interleukin 20 receptor, alpha
hg19_v2_chr2_+_234160217_234160335	0.0296194	PAX1_PAX9	ENST00000392017.4|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000347464.5|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000444735.1|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000373525.5|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000419681.1|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae)
hg19_v2_chr7_-_22234381_22234430	0.0277447	PAX1_PAX9	ENST00000458533.1|RAPGEF5|ENSG00000136237.14|Rap guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr2_+_234160340_234160360	0.0238778	PAX1_PAX9	ENST00000417017.1|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000392020.4|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000392018.1|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae)
hg19_v2_chr17_-_7137582_7137637	0.0233332	PAX1_PAX9	ENST00000575756.1|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2 	ENST00000575458.1|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2
hg19_v2_chr7_-_144533074_144533153	0.0230222	PAX1_PAX9	ENST00000360057.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1 	ENST00000378099.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1
hg19_v2_chr19_-_5838768_5838836	0.0226197	PAX1_PAX9	ENST00000527106.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 	ENST00000531199.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 	ENST00000529165.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)
hg19_v2_chr17_+_37356528_37356547	0.0214078	PAX1_PAX9	ENST00000225430.4|RPL19|ENSG00000108298.5|ribosomal protein L19
hg19_v2_chr11_-_126138808_126138877	0.0203261	PAX1_PAX9	ENST00000332118.6|SRPR|ENSG00000182934.7|signal recognition particle receptor (docking protein) 	ENST00000532259.1|SRPR|ENSG00000182934.7|signal recognition particle receptor (docking protein)
hg19_v2_chr8_+_102064237_102064282	0.020054	PAX1_PAX9	ENST00000514926.1|RP11-302J23.1|ENSG00000248599.1|RP11-302J23.1
hg19_v2_chr11_+_12308447_12308447	0.0196585	PAX1_PAX9	ENST00000256186.2|MICALCL|ENSG00000133808.4|MICAL C-terminal like
hg19_v2_chr14_-_69261310_69261453	0.0194906	PAX1_PAX9	ENST00000336440.3|ZFP36L1|ENSG00000185650.8|ZFP36 ring finger protein-like 1
hg19_v2_chr18_-_47018769_47018858	0.0191087	PAX1_PAX9	ENST00000583637.1|RPL17|ENSG00000265681.2|ribosomal protein L17 	ENST00000578528.1|RPL17|ENSG00000265681.2|ribosomal protein L17 	ENST00000578532.1|RPL17|ENSG00000265681.2|ribosomal protein L17 	ENST00000580387.1|RPL17|ENSG00000265681.2|ribosomal protein L17 	ENST00000579248.1|RPL17|ENSG00000265681.2|ribosomal protein L17 	ENST00000581373.1|RPL17|ENSG00000265681.2|ribosomal protein L17
hg19_v2_chr11_+_6947720_6947812	0.019099	PAX1_PAX9	ENST00000414517.2|ZNF215|ENSG00000149054.10|zinc finger protein 215
hg19_v2_chr17_+_76374714_76374759	0.0183273	PAX1_PAX9	ENST00000262764.6|PGS1|ENSG00000087157.14|phosphatidylglycerophosphate synthase 1 	ENST00000589689.1|PGS1|ENSG00000087157.14|phosphatidylglycerophosphate synthase 1 	ENST00000329897.7|PGS1|ENSG00000087157.14|phosphatidylglycerophosphate synthase 1 	ENST00000592043.1|PGS1|ENSG00000087157.14|phosphatidylglycerophosphate synthase 1 	ENST00000587356.1|PGS1|ENSG00000087157.14|phosphatidylglycerophosphate synthase 1
hg19_v2_chr10_-_99393242_99393344	0.0169029	PAX1_PAX9	ENST00000370635.3|MORN4|ENSG00000171160.13|MORN repeat containing 4 	ENST00000478953.1|MORN4|ENSG00000171160.13|MORN repeat containing 4 	ENST00000335628.3|MORN4|ENSG00000171160.13|MORN repeat containing 4
hg19_v2_chr6_+_159291090_159291223	0.0166586	PAX1_PAX9	ENST00000367073.4|C6orf99|ENSG00000203711.7|chromosome 6 open reading frame 99 	ENST00000608817.1|C6orf99|ENSG00000203711.7|chromosome 6 open reading frame 99
hg19_v2_chr17_+_37356586_37356612	0.0155866	PAX1_PAX9	ENST00000579260.1|RPL19|ENSG00000108298.5|ribosomal protein L19 	ENST00000582193.1|RPL19|ENSG00000108298.5|ribosomal protein L19
hg19_v2_chr17_+_37356555_37356580	0.0150767	PAX1_PAX9	ENST00000579374.1|RPL19|ENSG00000108298.5|ribosomal protein L19
hg19_v2_chr17_-_39968406_39968451	0.0147658	PAX1_PAX9	ENST00000393928.1|LEPREL4|ENSG00000141696.8|leprecan-like 4
hg19_v2_chr18_-_47017956_47018210	0.0145658	PAX1_PAX9	ENST00000584895.1|RPL17-C18orf32|ENSG00000215472.5|RPL17-C18orf32 readthrough 	ENST00000332968.6|RPL17-C18orf32|ENSG00000215472.5|RPL17-C18orf32 readthrough 	ENST00000580210.1|RPL17|ENSG00000265681.2|ribosomal protein L17 	ENST00000579408.1|RPL17|ENSG00000265681.2|ribosomal protein L17
hg19_v2_chr2_-_175711978_175712109	0.0132398	PAX1_PAX9	ENST00000409089.2|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr3_+_127771212_127771316	0.011386	PAX1_PAX9	ENST00000243253.3|SEC61A1|ENSG00000058262.5|Sec61 alpha 1 subunit (S. cerevisiae) 	ENST00000481210.1|SEC61A1|ENSG00000058262.5|Sec61 alpha 1 subunit (S. cerevisiae)
hg19_v2_chrX_+_148622513_148622612	0.0107482	PAX1_PAX9	ENST00000393985.3|CXorf40A|ENSG00000197620.6|chromosome X open reading frame 40A 	ENST00000423421.1|CXorf40A|ENSG00000197620.6|chromosome X open reading frame 40A 	ENST00000423540.2|CXorf40A|ENSG00000197620.6|chromosome X open reading frame 40A 	ENST00000434353.2|CXorf40A|ENSG00000197620.6|chromosome X open reading frame 40A 	ENST00000514208.1|CXorf40A|ENSG00000197620.6|chromosome X open reading frame 40A
hg19_v2_chr1_+_45140360_45140399	0.0103463	PAX1_PAX9	ENST00000418644.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000458657.2|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000441519.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000535358.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000445071.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228
hg19_v2_chr6_-_137494775_137494785	0.0100809	PAX1_PAX9	ENST00000349184.4|IL22RA2|ENSG00000164485.10|interleukin 22 receptor, alpha 2 	ENST00000296980.2|IL22RA2|ENSG00000164485.10|interleukin 22 receptor, alpha 2 	ENST00000339602.3|IL22RA2|ENSG00000164485.10|interleukin 22 receptor, alpha 2
hg19_v2_chr10_+_82297658_82297658	0.00908083	PAX1_PAX9	ENST00000339284.2|SH2D4B|ENSG00000178217.9|SH2 domain containing 4B
hg19_v2_chr6_+_74104471_74104528	0.00901083	PAX1_PAX9	ENST00000370336.4|DDX43|ENSG00000080007.6|DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
hg19_v2_chr1_-_204165610_204165626	0.00875596	PAX1_PAX9	ENST00000367194.4|KISS1|ENSG00000170498.7|KiSS-1 metastasis-suppressor
hg19_v2_chr8_+_39792474_39792474	0.00871878	PAX1_PAX9	ENST00000502986.2|IDO2|ENSG00000188676.9|indoleamine 2,3-dioxygenase 2
hg19_v2_chr10_-_99393208_99393237	0.00843683	PAX1_PAX9	ENST00000307450.6|MORN4|ENSG00000171160.13|MORN repeat containing 4
hg19_v2_chr17_-_39968855_39968880	0.00836624	PAX1_PAX9	ENST00000355468.3|LEPREL4|ENSG00000141696.8|leprecan-like 4 	ENST00000590496.1|LEPREL4|ENSG00000141696.8|leprecan-like 4
hg19_v2_chr22_+_39745930_39746012	0.00830661	PAX1_PAX9	ENST00000318801.4|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000216155.7|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000406293.3|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000328933.5|SYNGR1|ENSG00000100321.10|synaptogyrin 1
hg19_v2_chr12_-_101801505_101801598	0.0080479	PAX1_PAX9	ENST00000539055.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000551688.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000551671.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000261636.8|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1
hg19_v2_chrX_-_132091284_132091372	0.0072087	PAX1_PAX9	ENST00000370833.2|HS6ST2|ENSG00000171004.13|heparan sulfate 6-O-sulfotransferase 2
hg19_v2_chr2_-_39414848_39414848	0.00698821	PAX1_PAX9	ENST00000451199.1|CDKL4|ENSG00000205111.4|cyclin-dependent kinase-like 4
hg19_v2_chr3_-_57113281_57113312	0.00696655	PAX1_PAX9	ENST00000468466.1|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3
hg19_v2_chr15_+_63569731_63569783	0.00686948	PAX1_PAX9	ENST00000261879.5|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit
hg19_v2_chr11_+_6947647_6947698	0.00666492	PAX1_PAX9	ENST00000278319.5|ZNF215|ENSG00000149054.10|zinc finger protein 215
hg19_v2_chr1_+_26758849_26758899	0.00327948	PAX1_PAX9	ENST00000533087.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000531312.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000525165.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000525326.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000525546.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000436153.2|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000530781.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase
hg19_v2_chr15_+_63569785_63569824	0.00276811	PAX1_PAX9	ENST00000380343.4|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit 	ENST00000560353.1|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit
hg19_v2_chr1_+_26758790_26758847	0.0027166	PAX1_PAX9	ENST00000427245.2|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000525682.2|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000236342.7|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000526219.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000374185.3|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000360009.2|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase
hg19_v2_chr19_-_40791302_40791443	0.00260821	PAX1_PAX9	ENST00000392038.2|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2 	ENST00000578123.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr9_+_6716478_6716551	0.00259926	PAX1_PAX9	ENST00000452643.1|RP11-390F4.3|ENSG00000225489.2|RP11-390F4.3
hg19_v2_chr6_+_3118926_3118976	0.00244813	PAX1_PAX9	ENST00000380379.5|BPHL|ENSG00000137274.8|biphenyl hydrolase-like (serine hydrolase)
hg19_v2_chr2_-_162931052_162931063	0.00239227	PAX1_PAX9	ENST00000360534.3|DPP4|ENSG00000197635.5|dipeptidyl-peptidase 4
hg19_v2_chr14_+_64854958_64855091	0.00203763	PAX1_PAX9	ENST00000555709.2|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 	ENST00000554739.1|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 	ENST00000554768.1|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 	ENST00000216605.8|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase
hg19_v2_chr16_-_84076241_84076384	0.00133655	PAX1_PAX9	ENST00000568178.1|SLC38A8|ENSG00000166558.6|solute carrier family 38, member 8
hg19_v2_chr5_-_133747589_133747603	0.00100052	PAX1_PAX9	ENST00000458198.2|CDKN2AIPNL|ENSG00000237190.3|CDKN2A interacting protein N-terminal like
hg19_v2_chr4_+_619347_619382	0.000862677	PAX1_PAX9	ENST00000255622.6|PDE6B|ENSG00000133256.8|phosphodiesterase 6B, cGMP-specific, rod, beta
