hg19_v2_chr6_+_26020672_26020718	0.185683	NKX3-1	ENST00000357647.3|HIST1H3A|ENSG00000198366.5|histone cluster 1, H3a
hg19_v2_chr4_+_17579110_17579130	0.15338	NKX3-1	ENST00000606142.1|LAP3|ENSG00000002549.8|leucine aminopeptidase 3
hg19_v2_chr18_+_61144160_61144360	0.127794	NKX3-1	ENST00000489441.1|SERPINB5|ENSG00000206075.9|serpin peptidase inhibitor, clade B (ovalbumin), member 5 	ENST00000424602.1|SERPINB5|ENSG00000206075.9|serpin peptidase inhibitor, clade B (ovalbumin), member 5
hg19_v2_chr11_+_65266507_65266522	0.117684	NKX3-1	ENST00000544868.1|MALAT1|ENSG00000251562.3|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
hg19_v2_chr19_+_50433476_50433510	0.115492	NKX3-1	ENST00000596658.1|ATF5|ENSG00000169136.4|activating transcription factor 5
hg19_v2_chr22_+_18632666_18632764	0.113204	NKX3-1	ENST00000215794.7|USP18|ENSG00000184979.9|ubiquitin specific peptidase 18
hg19_v2_chr19_-_44174330_44174502	0.0978751	NKX3-1	ENST00000340093.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr16_+_47496023_47496116	0.0960058	NKX3-1	ENST00000567200.1|PHKB|ENSG00000102893.11|phosphorylase kinase, beta
hg19_v2_chr11_-_62323702_62323738	0.095447	NKX3-1	ENST00000530285.1|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein
hg19_v2_chr11_-_104480019_104480058	0.0946028	NKX3-1	ENST00000536529.1|RP11-886D15.1|ENSG00000256422.1|RP11-886D15.1	ENST00000545630.1|RP11-886D15.1|ENSG00000256422.1|RP11-886D15.1	ENST00000538641.1|RP11-886D15.1|ENSG00000256422.1|RP11-886D15.1
hg19_v2_chr14_-_68066849_68066972	0.0937972	NKX3-1	ENST00000558493.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000561272.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H
hg19_v2_chr12_-_118628315_118628348	0.0921247	NKX3-1	ENST00000540561.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr12_+_113354341_113354422	0.0915179	NKX3-1	ENST00000553152.1|OAS1|ENSG00000089127.8|2'-5'-oligoadenylate synthetase 1, 40/46kDa
hg19_v2_chr14_+_61449197_61449275	0.0872021	NKX3-1	ENST00000533744.2|SLC38A6|ENSG00000139974.11|solute carrier family 38, member 6
hg19_v2_chr4_-_77996032_77996068	0.0818354	NKX3-1	ENST00000505609.1|CCNI|ENSG00000118816.5|cyclin I
hg19_v2_chr4_-_48082192_48082207	0.077961	NKX3-1	ENST00000507351.1|TXK|ENSG00000074966.6|TXK tyrosine kinase
hg19_v2_chr22_+_44427230_44427253	0.0776118	NKX3-1	ENST00000444029.1|PARVB|ENSG00000188677.10|parvin, beta
hg19_v2_chr12_-_118628350_118628371	0.0769074	NKX3-1	ENST00000537952.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000537822.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr13_-_30951282_30951346	0.0756477	NKX3-1	ENST00000420219.1|LINC00426|ENSG00000238121.1|long intergenic non-protein coding RNA 426
hg19_v2_chr6_+_43603552_43603563	0.0751569	NKX3-1	ENST00000372171.4|MAD2L1BP|ENSG00000124688.9|MAD2L1 binding protein
hg19_v2_chr22_-_36761081_36761157	0.0686013	NKX3-1	ENST00000456729.1|MYH9|ENSG00000100345.16|myosin, heavy chain 9, non-muscle 	ENST00000401701.1|MYH9|ENSG00000100345.16|myosin, heavy chain 9, non-muscle
hg19_v2_chr10_+_5406935_5406972	0.066206	NKX3-1	ENST00000380433.3|UCN3|ENSG00000178473.5|urocortin 3
hg19_v2_chr14_+_23654525_23654545	0.0661072	NKX3-1	ENST00000399910.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164 	ENST00000492621.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164
hg19_v2_chr11_+_108093755_108093832	0.0638566	NKX3-1	ENST00000527891.1|ATM|ENSG00000149311.13|ataxia telangiectasia mutated 	ENST00000532931.1|ATM|ENSG00000149311.13|ataxia telangiectasia mutated
hg19_v2_chr4_+_159131630_159131647	0.0627107	NKX3-1	ENST00000504569.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000509278.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000514558.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000503200.1|TMEM144|ENSG00000164124.6|transmembrane protein 144
hg19_v2_chr2_+_201994569_201994589	0.0614958	NKX3-1	ENST00000457277.1|CFLAR|ENSG00000003402.15|CASP8 and FADD-like apoptosis regulator
hg19_v2_chr19_-_44174305_44174329	0.0613949	NKX3-1	ENST00000601723.1|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor 	ENST00000339082.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr1_-_154164534_154164687	0.0587802	NKX3-1	ENST00000271850.7|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000368530.2|TPM3|ENSG00000143549.15|tropomyosin 3
hg19_v2_chr1_-_160232312_160232323	0.0567264	NKX3-1	ENST00000440682.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr9_+_134065506_134065509	0.0559237	NKX3-1	ENST00000483497.2|NUP214|ENSG00000126883.12|nucleoporin 214kDa
hg19_v2_chr1_-_6445809_6445885	0.0558212	NKX3-1	ENST00000377855.2|ACOT7|ENSG00000097021.15|acyl-CoA thioesterase 7
hg19_v2_chr2_+_102456277_102456290	0.0556766	NKX3-1	ENST00000421882.1|MAP4K4|ENSG00000071054.11|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v2_chr7_-_112635675_112635720	0.0550009	NKX3-1	ENST00000447785.1|AC018464.3|ENSG00000234520.1|AC018464.3	ENST00000451962.1|AC018464.3|ENSG00000234520.1|AC018464.3
hg19_v2_chr5_-_65018834_65018863	0.0545916	NKX3-1	ENST00000506816.1|SGTB|ENSG00000197860.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
hg19_v2_chr20_+_2795609_2795620	0.0544317	NKX3-1	ENST00000554164.1|TMEM239|ENSG00000198326.8|transmembrane protein 239 	ENST00000380593.4|TMEM239|ENSG00000241690.3|CDNA FLJ26142 fis, clone TST04526; Transmembrane protein 239; Uncharacterized protein
hg19_v2_chr21_-_46964306_46964332	0.0513745	NKX3-1	ENST00000443742.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1 	ENST00000528477.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1 	ENST00000567670.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1
hg19_v2_chr17_-_76870222_76870242	0.0491984	NKX3-1	ENST00000585421.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr7_+_16700806_16700897	0.0489987	NKX3-1	ENST00000446596.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000438834.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2
hg19_v2_chr19_-_11266437_11266467	0.0489557	NKX3-1	ENST00000586708.1|SPC24|ENSG00000161888.7|SPC24, NDC80 kinetochore complex component 	ENST00000591396.1|SPC24|ENSG00000161888.7|SPC24, NDC80 kinetochore complex component 	ENST00000592967.1|SPC24|ENSG00000161888.7|SPC24, NDC80 kinetochore complex component 	ENST00000585486.1|SPC24|ENSG00000161888.7|SPC24, NDC80 kinetochore complex component 	ENST00000585567.1|SPC24|ENSG00000161888.7|SPC24, NDC80 kinetochore complex component
hg19_v2_chr17_+_41150793_41150826	0.0474338	NKX3-1	ENST00000586277.1|RPL27|ENSG00000131469.8|ribosomal protein L27
hg19_v2_chr19_-_42006539_42006559	0.0463546	NKX3-1	ENST00000597702.1|AC011526.1|ENSG00000267107.2|AC011526.1	ENST00000588495.1|AC011526.1|ENSG00000267107.2|AC011526.1	ENST00000595837.1|AC011526.1|ENSG00000267107.2|AC011526.1	ENST00000594315.1|AC011526.1|ENSG00000267107.2|AC011526.1
hg19_v2_chr3_-_48632593_48632770	0.0452616	NKX3-1	ENST00000454817.1|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1 	ENST00000328333.8|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1
hg19_v2_chr17_-_76870126_76870201	0.044723	NKX3-1	ENST00000586057.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr9_+_90341024_90341055	0.0446142	NKX3-1	ENST00000340342.6|CTSL|ENSG00000135047.10|cathepsin L 	ENST00000342020.5|CTSL|ENSG00000135047.10|cathepsin L
hg19_v2_chr2_+_64069240_64069332	0.0440837	NKX3-1	ENST00000497883.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr10_+_118187379_118187397	0.0437325	NKX3-1	ENST00000369230.3|PNLIPRP3|ENSG00000203837.4|pancreatic lipase-related protein 3
hg19_v2_chr1_-_208417620_208417680	0.0436984	NKX3-1	ENST00000367033.3|PLXNA2|ENSG00000076356.6|plexin A2
hg19_v2_chr16_+_3068393_3068446	0.0433155	NKX3-1	ENST00000573001.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr3_+_113251143_113251263	0.0433074	NKX3-1	ENST00000264852.4|SIDT1|ENSG00000072858.6|SID1 transmembrane family, member 1 	ENST00000393830.3|SIDT1|ENSG00000072858.6|SID1 transmembrane family, member 1
hg19_v2_chr3_-_69249863_69250049	0.0427889	NKX3-1	ENST00000478263.1|FRMD4B|ENSG00000114541.10|FERM domain containing 4B 	ENST00000462512.1|FRMD4B|ENSG00000114541.10|FERM domain containing 4B
hg19_v2_chr6_+_63921399_63921462	0.0425462	NKX3-1	ENST00000356170.3|FKBP1C|ENSG00000198225.4|FK506 binding protein 1C
hg19_v2_chr10_-_91403625_91403649	0.0425285	NKX3-1	ENST00000322191.6|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000342512.3|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000371774.2|PANK1|ENSG00000152782.12|pantothenate kinase 1
hg19_v2_chr11_+_47293795_47293821	0.0412003	NKX3-1	ENST00000422579.1|MADD|ENSG00000110514.14|MAP-kinase activating death domain
hg19_v2_chr22_+_42017987_42018029	0.0411163	NKX3-1	ENST00000405506.1|XRCC6|ENSG00000196419.8|X-ray repair complementing defective repair in Chinese hamster cells 6
hg19_v2_chr13_+_50570019_50570028	0.041045	NKX3-1	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr1_-_149785236_149785236	0.0405759	NKX3-1	ENST00000331491.1|HIST2H3D|ENSG00000183598.3|histone cluster 2, H3d
hg19_v2_chr12_+_110011571_110011644	0.04052	NKX3-1	ENST00000539696.1|MVK|ENSG00000110921.7|mevalonate kinase 	ENST00000228510.3|MVK|ENSG00000110921.7|mevalonate kinase 	ENST00000392727.3|MVK|ENSG00000110921.7|mevalonate kinase
hg19_v2_chr2_-_102003987_102004057	0.0403447	NKX3-1	ENST00000324768.5|CREG2|ENSG00000175874.5|cellular repressor of E1A-stimulated genes 2
hg19_v2_chr11_+_114168085_114168222	0.0396357	NKX3-1	ENST00000541754.1|NNMT|ENSG00000166741.3|nicotinamide N-methyltransferase
hg19_v2_chr7_-_112430427_112430478	0.0393309	NKX3-1	ENST00000449743.1|TMEM168|ENSG00000146802.8|transmembrane protein 168 	ENST00000441474.1|TMEM168|ENSG00000146802.8|transmembrane protein 168 	ENST00000454074.1|TMEM168|ENSG00000146802.8|transmembrane protein 168 	ENST00000447395.1|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr19_+_54609230_54609272	0.039239	NKX3-1	ENST00000420296.1|NDUFA3|ENSG00000170906.11|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa
hg19_v2_chr14_+_95078714_95078739	0.0391417	NKX3-1	ENST00000393078.3|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 	ENST00000393080.4|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 	ENST00000467132.1|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
hg19_v2_chr17_+_33914424_33914455	0.0384658	NKX3-1	ENST00000590432.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit
hg19_v2_chr5_+_112312416_112312440	0.0378538	NKX3-1	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr6_+_37321823_37321867	0.0376887	NKX3-1	ENST00000487950.1|RNF8|ENSG00000112130.12|ring finger protein 8, E3 ubiquitin protein ligase 	ENST00000469731.1|RNF8|ENSG00000112130.12|ring finger protein 8, E3 ubiquitin protein ligase
hg19_v2_chr17_+_7358889_7358913	0.0373785	NKX3-1	ENST00000575379.1|CHRNB1|ENSG00000170175.6|cholinergic receptor, nicotinic, beta 1 (muscle)
hg19_v2_chr10_+_135204338_135204338	0.0372505	NKX3-1	ENST00000468317.2|RP11-108K14.8|ENSG00000254536.1|Mitochondrial GTPase 1
hg19_v2_chr11_+_9482551_9482604	0.0366838	NKX3-1	ENST00000438144.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000526657.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000299606.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000534265.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000412390.2|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr17_+_33914276_33914386	0.0361317	NKX3-1	ENST00000592545.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit 	ENST00000538556.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit 	ENST00000312678.8|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit 	ENST00000589344.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit
hg19_v2_chr17_+_48609903_48609947	0.0359637	NKX3-1	ENST00000268933.3|EPN3|ENSG00000049283.13|epsin 3
hg19_v2_chr15_-_55563072_55563135	0.0359298	NKX3-1	ENST00000567380.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family 	ENST00000565972.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family 	ENST00000569493.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr3_-_160116995_160117020	0.0358676	NKX3-1	ENST00000465537.1|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas) 	ENST00000486856.1|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas) 	ENST00000468218.1|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas) 	ENST00000478370.1|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas)
hg19_v2_chr11_-_9482010_9482185	0.0357963	NKX3-1	ENST00000596206.1|AC132192.1|ENSG00000268403.1|LOC644656 protein; Uncharacterized protein
hg19_v2_chr3_-_69101413_69101457	0.0345536	NKX3-1	ENST00000398559.2|TMF1|ENSG00000144747.10|TATA element modulatory factor 1
hg19_v2_chr10_+_115939008_115939073	0.0342687	NKX3-1	ENST00000369282.1|TDRD1|ENSG00000095627.5|tudor domain containing 1 	ENST00000251864.2|TDRD1|ENSG00000095627.5|tudor domain containing 1 	ENST00000369281.2|TDRD1|ENSG00000095627.5|tudor domain containing 1 	ENST00000422662.1|TDRD1|ENSG00000095627.5|tudor domain containing 1
hg19_v2_chr11_+_8040739_8040815	0.0339881	NKX3-1	ENST00000534099.1|TUB|ENSG00000166402.4|tubby bipartite transcription factor
hg19_v2_chr6_-_26124138_26124168	0.0336079	NKX3-1	ENST00000314332.5|HIST1H2BC|ENSG00000180596.7|histone cluster 1, H2bc 	ENST00000396984.1|HIST1H2BC|ENSG00000180596.7|histone cluster 1, H2bc
hg19_v2_chr17_+_33914460_33914536	0.0331235	NKX3-1	ENST00000537622.2|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit
hg19_v2_chr11_+_101983176_101983245	0.0329618	NKX3-1	ENST00000524575.1|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr7_-_143582450_143582475	0.0329123	NKX3-1	ENST00000485416.1|FAM115A|ENSG00000198420.5|family with sequence similarity 115, member A
hg19_v2_chr11_+_57435441_57435628	0.0326663	NKX3-1	ENST00000528177.1|ZDHHC5|ENSG00000156599.6|zinc finger, DHHC-type containing 5
hg19_v2_chr5_+_179125368_179125433	0.0323576	NKX3-1	ENST00000502296.1|CANX|ENSG00000127022.10|calnexin 	ENST00000504734.1|CANX|ENSG00000127022.10|calnexin 	ENST00000415618.2|CANX|ENSG00000127022.10|calnexin
hg19_v2_chr10_-_103347883_103348027	0.0323006	NKX3-1	ENST00000339310.3|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000370158.3|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000299206.4|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000456836.2|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000413344.1|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000429502.1|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000430045.1|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000370172.1|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000436284.2|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000370162.3|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda
hg19_v2_chr17_+_42422629_42422636	0.0319395	NKX3-1	ENST00000589536.1|GRN|ENSG00000030582.12|granulin 	ENST00000587109.1|GRN|ENSG00000030582.12|granulin 	ENST00000587518.1|GRN|ENSG00000030582.12|granulin
hg19_v2_chr9_+_134065519_134065535	0.0315859	NKX3-1	ENST00000531600.1|NUP214|ENSG00000126883.12|nucleoporin 214kDa
hg19_v2_chr10_-_61900762_61900779	0.0312398	NKX3-1	ENST00000355288.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr1_-_22109484_22109528	0.03113	NKX3-1	ENST00000529637.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr11_-_33913708_33913836	0.0309788	NKX3-1	ENST00000257818.2|LMO2|ENSG00000135363.7|LIM domain only 2 (rhombotin-like 1)
hg19_v2_chr10_+_46994087_46994087	0.0309761	NKX3-1	ENST00000374317.1|GPRIN2|ENSG00000204175.4|G protein regulated inducer of neurite outgrowth 2
hg19_v2_chr6_-_127780510_127780539	0.0304454	NKX3-1	ENST00000487331.2|KIAA0408|ENSG00000189367.10|KIAA0408 	ENST00000483725.3|KIAA0408|ENSG00000189367.10|KIAA0408
hg19_v2_chr12_-_50290839_50290873	0.0304277	NKX3-1	ENST00000552863.1|FAIM2|ENSG00000135472.4|Fas apoptotic inhibitory molecule 2
hg19_v2_chr12_-_125398850_125399198	0.0296024	NKX3-1	ENST00000535859.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000546271.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000540700.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000546120.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr2_+_48541776_48541874	0.0294215	NKX3-1	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr14_-_39417410_39417466	0.0293076	NKX3-1	ENST00000557019.1|LINC00639|ENSG00000259070.1|long intergenic non-protein coding RNA 639 	ENST00000556116.1|LINC00639|ENSG00000259070.1|long intergenic non-protein coding RNA 639 	ENST00000554732.1|LINC00639|ENSG00000259070.1|long intergenic non-protein coding RNA 639
hg19_v2_chrX_+_153237740_153237778	0.0289056	NKX3-1	ENST00000369982.4|TMEM187|ENSG00000177854.7|transmembrane protein 187
hg19_v2_chr1_+_27114589_27114712	0.02877	NKX3-1	ENST00000431541.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000449950.2|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000374145.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V
hg19_v2_chr1_+_10459433_10459689	0.0286723	NKX3-1	ENST00000465632.1|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase 	ENST00000460189.1|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase
hg19_v2_chr16_+_33204156_33204156	0.0283228	NKX3-1	ENST00000398667.4|TP53TG3C|ENSG00000205457.6|TP53 target 3C
hg19_v2_chr12_+_109569155_109569172	0.0283066	NKX3-1	ENST00000539864.1|ACACB|ENSG00000076555.11|acetyl-CoA carboxylase beta
hg19_v2_chr12_-_92536433_92536459	0.0283002	NKX3-1	ENST00000551563.2|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000546975.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000549802.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79
hg19_v2_chr16_+_28985542_28985642	0.0280002	NKX3-1	ENST00000567771.1|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila) 	ENST00000568388.1|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila)
hg19_v2_chr14_+_67656110_67656162	0.027484	NKX3-1	ENST00000524532.1|FAM71D|ENSG00000172717.11|family with sequence similarity 71, member D 	ENST00000530728.1|FAM71D|ENSG00000172717.11|family with sequence similarity 71, member D
hg19_v2_chr5_+_96038554_96038572	0.0274306	NKX3-1	ENST00000508197.1|CAST|ENSG00000153113.19|calpastatin
hg19_v2_chr2_+_64069459_64069579	0.0267307	NKX3-1	ENST00000445915.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2 	ENST00000475462.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr4_-_105416039_105416065	0.0261493	NKX3-1	ENST00000394767.2|CXXC4|ENSG00000168772.9|CXXC finger protein 4
hg19_v2_chr12_-_125398602_125398625	0.0258453	NKX3-1	ENST00000541272.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000535131.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr19_-_45457264_45457264	0.0252761	NKX3-1	ENST00000591646.1|CTB-129P6.11|ENSG00000267114.1|Uncharacterized protein
hg19_v2_chr2_+_216974020_216974091	0.0248038	NKX3-1	ENST00000392132.2|XRCC5|ENSG00000079246.11|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 	ENST00000417391.1|XRCC5|ENSG00000079246.11|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg19_v2_chr19_-_2944907_2944981	0.0247546	NKX3-1	ENST00000314531.4|ZNF77|ENSG00000175691.8|zinc finger protein 77
hg19_v2_chr1_-_32169761_32169776	0.0247121	NKX3-1	ENST00000271069.6|COL16A1|ENSG00000084636.13|collagen, type XVI, alpha 1
hg19_v2_chr2_-_55496476_55496486	0.0246708	NKX3-1	ENST00000441307.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2
hg19_v2_chr16_+_73420942_73420962	0.024631	NKX3-1	ENST00000554640.1|RP11-140I24.1|ENSG00000258779.2|RP11-140I24.1	ENST00000562661.1|RP11-140I24.1|ENSG00000258779.2|RP11-140I24.1	ENST00000561875.1|RP11-140I24.1|ENSG00000258779.2|RP11-140I24.1
hg19_v2_chr1_-_32169920_32169988	0.0245028	NKX3-1	ENST00000373672.3|COL16A1|ENSG00000084636.13|collagen, type XVI, alpha 1 	ENST00000373668.3|COL16A1|ENSG00000084636.13|collagen, type XVI, alpha 1
hg19_v2_chr19_+_16308711_16308786	0.0242614	NKX3-1	ENST00000429941.2|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit 	ENST00000444449.2|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit 	ENST00000589822.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit
hg19_v2_chr7_+_77325738_77325789	0.0238992	NKX3-1	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chr3_-_39196049_39196062	0.0237235	NKX3-1	ENST00000514182.1|CSRNP1|ENSG00000144655.10|cysteine-serine-rich nuclear protein 1
hg19_v2_chr6_-_31648150_31648154	0.0232501	NKX3-1	ENST00000375858.3|LY6G5C|ENSG00000204428.8|lymphocyte antigen 6 complex, locus G5C 	ENST00000383237.4|LY6G5C|ENSG00000204428.8|lymphocyte antigen 6 complex, locus G5C
hg19_v2_chr14_-_23388338_23388393	0.0232248	NKX3-1	ENST00000555209.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554256.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557403.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557549.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555676.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557571.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557464.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554618.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000556862.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555722.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000346528.5|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000542016.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000399922.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557227.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000359890.3|RBM23|ENSG00000100461.13|RNA binding motif protein 23
hg19_v2_chr12_-_22063787_22063912	0.0228211	NKX3-1	ENST00000544039.1|ABCC9|ENSG00000069431.6|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
hg19_v2_chr10_-_28571015_28571067	0.0228169	NKX3-1	ENST00000375719.3|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) 	ENST00000375732.1|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v2_chrX_-_51797351_51797351	0.0226785	NKX3-1	ENST00000375644.3|RP11-114H20.1|ENSG00000182776.4|RP11-114H20.1
hg19_v2_chr1_-_153931052_153931124	0.0226375	NKX3-1	ENST00000368630.3|CRTC2|ENSG00000160741.12|CREB regulated transcription coactivator 2 	ENST00000368633.1|CRTC2|ENSG00000160741.12|CREB regulated transcription coactivator 2
hg19_v2_chr17_+_67498295_67498333	0.0224514	NKX3-1	ENST00000589295.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr2_+_64068844_64068997	0.0219849	NKX3-1	ENST00000337130.5|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr17_+_67498396_67498409	0.0217547	NKX3-1	ENST00000588110.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr17_-_34257731_34257766	0.0216875	NKX3-1	ENST00000431884.2|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000425909.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000394528.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000430160.2|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chr17_+_2699697_2699776	0.0214686	NKX3-1	ENST00000254695.8|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2 	ENST00000366401.4|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2 	ENST00000542807.1|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2
hg19_v2_chr11_-_117688216_117688240	0.0213599	NKX3-1	ENST00000525836.1|DSCAML1|ENSG00000177103.9|Down syndrome cell adhesion molecule like 1
hg19_v2_chr7_-_33080506_33080528	0.0211838	NKX3-1	ENST00000381626.2|NT5C3A|ENSG00000122643.14|5'-nucleotidase, cytosolic IIIA 	ENST00000409467.1|NT5C3A|ENSG00000122643.14|5'-nucleotidase, cytosolic IIIA 	ENST00000449201.1|NT5C3A|ENSG00000122643.14|5'-nucleotidase, cytosolic IIIA
hg19_v2_chr18_+_61445205_61445227	0.021085	NKX3-1	ENST00000431370.1|SERPINB7|ENSG00000166396.8|serpin peptidase inhibitor, clade B (ovalbumin), member 7
hg19_v2_chr12_-_10562356_10562356	0.0209212	NKX3-1	ENST00000309384.1|KLRC4|ENSG00000183542.4|killer cell lectin-like receptor subfamily C, member 4
hg19_v2_chr7_+_79765071_79765103	0.0208863	NKX3-1	ENST00000457358.2|GNAI1|ENSG00000127955.11|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1
hg19_v2_chr12_+_12966250_12966302	0.0208698	NKX3-1	ENST00000352940.4|DDX47|ENSG00000213782.3|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENST00000358007.3|DDX47|ENSG00000213782.3|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENST00000544400.1|DDX47|ENSG00000213782.3|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
hg19_v2_chr7_-_7680601_7680632	0.0208072	NKX3-1	ENST00000396682.2|RPA3|ENSG00000106399.7|replication protein A3, 14kDa
hg19_v2_chr5_+_150404904_150404928	0.0207359	NKX3-1	ENST00000521632.1|GPX3|ENSG00000211445.7|glutathione peroxidase 3 (plasma)
hg19_v2_chr17_+_80674559_80674663	0.0204286	NKX3-1	ENST00000269373.6|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein 	ENST00000535965.1|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein 	ENST00000577128.1|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein 	ENST00000573158.1|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein
hg19_v2_chr20_-_56286479_56286541	0.0204236	NKX3-1	ENST00000265626.4|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1
hg19_v2_chr4_-_10118469_10118521	0.0204054	NKX3-1	ENST00000499869.2|WDR1|ENSG00000071127.12|WD repeat domain 1
hg19_v2_chr8_-_27168737_27168836	0.019714	NKX3-1	ENST00000521253.1|TRIM35|ENSG00000104228.8|tripartite motif containing 35 	ENST00000305364.4|TRIM35|ENSG00000104228.8|tripartite motif containing 35
hg19_v2_chr2_-_55496174_55496334	0.0194938	NKX3-1	ENST00000417363.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000412530.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000394600.3|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000366137.2|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000420637.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2
hg19_v2_chr1_+_46972668_46972669	0.0190497	NKX3-1	ENST00000371956.4|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1 	ENST00000360032.3|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1
hg19_v2_chr16_+_89628778_89628803	0.0188025	NKX3-1	ENST00000472354.1|RPL13|ENSG00000167526.9|ribosomal protein L13
hg19_v2_chr5_-_43412418_43412499	0.0187205	NKX3-1	ENST00000537013.1|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28 	ENST00000361115.4|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28
hg19_v2_chr12_-_57039739_57039798	0.0187014	NKX3-1	ENST00000552959.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000551020.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000553007.2|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000552919.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000552104.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000262030.3|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
hg19_v2_chr3_-_10334617_10334637	0.0186485	NKX3-1	ENST00000429122.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000425479.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000335542.8|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide
hg19_v2_chr20_-_56285595_56285656	0.0183643	NKX3-1	ENST00000395816.3|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1 	ENST00000347215.4|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1
hg19_v2_chrX_-_19688475_19688492	0.0179254	NKX3-1	ENST00000541422.1|SH3KBP1|ENSG00000147010.13|SH3-domain kinase binding protein 1
hg19_v2_chr3_-_15106747_15106842	0.0178635	NKX3-1	ENST00000449354.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25 	ENST00000444840.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25 	ENST00000253686.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25
hg19_v2_chr7_-_6066183_6066222	0.0178288	NKX3-1	ENST00000422786.1|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1
hg19_v2_chr9_+_97766469_97766518	0.0177623	NKX3-1	ENST00000433691.2|C9orf3|ENSG00000148120.10|chromosome 9 open reading frame 3
hg19_v2_chr1_-_21377447_21377487	0.0174159	NKX3-1	ENST00000374937.3|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000264211.8|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3
hg19_v2_chrX_-_132231123_132231140	0.0173715	NKX3-1	ENST00000511190.1|USP26|ENSG00000134588.8|ubiquitin specific peptidase 26
hg19_v2_chr6_-_154751629_154751694	0.0168698	NKX3-1	ENST00000424998.1|CNKSR3|ENSG00000153721.13|CNKSR family member 3
hg19_v2_chr8_+_77593448_77593471	0.0165953	NKX3-1	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr3_-_69101461_69101494	0.0165459	NKX3-1	ENST00000543976.1|TMF1|ENSG00000144747.10|TATA element modulatory factor 1
hg19_v2_chr16_+_69373323_69373371	0.0165138	NKX3-1	ENST00000254940.5|NIP7|ENSG00000132603.9|NIP7, nucleolar pre-rRNA processing protein
hg19_v2_chr20_-_50722183_50722217	0.0165075	NKX3-1	ENST00000371523.4|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein
hg19_v2_chr1_-_78444776_78444800	0.0164675	NKX3-1	ENST00000370767.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1 	ENST00000421641.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1
hg19_v2_chr1_+_186798073_186798147	0.0162476	NKX3-1	ENST00000367466.3|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent) 	ENST00000442353.2|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent)
hg19_v2_chr16_+_1832902_1833008	0.0161905	NKX3-1	ENST00000262302.9|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000563136.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000565987.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000543305.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000568287.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000565134.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2
hg19_v2_chr2_-_37374876_37374949	0.0160613	NKX3-1	ENST00000405334.1|EIF2AK2|ENSG00000055332.12|eukaryotic translation initiation factor 2-alpha kinase 2
hg19_v2_chr6_+_42928485_42928496	0.0159742	NKX3-1	ENST00000372808.3|GNMT|ENSG00000124713.5|glycine N-methyltransferase
hg19_v2_chr2_+_238877424_238877439	0.0158017	NKX3-1	ENST00000434655.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative)
hg19_v2_chr11_+_8704748_8704792	0.0152764	NKX3-1	ENST00000526562.1|RPL27A|ENSG00000166441.8|ribosomal protein L27a 	ENST00000525981.1|RPL27A|ENSG00000166441.8|ribosomal protein L27a
hg19_v2_chr19_-_14889349_14889381	0.0151995	NKX3-1	ENST00000315576.3|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000392967.2|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000346057.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000353876.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000353005.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2
hg19_v2_chr1_-_154832316_154832336	0.0149979	NKX3-1	ENST00000361147.4|KCNN3|ENSG00000143603.14|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v2_chr4_+_108746282_108746364	0.0149331	NKX3-1	ENST00000503862.1|SGMS2|ENSG00000164023.10|sphingomyelin synthase 2
hg19_v2_chr11_-_64684672_64684722	0.0144866	NKX3-1	ENST00000377264.3|ATG2A|ENSG00000110046.8|autophagy related 2A 	ENST00000421419.2|ATG2A|ENSG00000110046.8|autophagy related 2A
hg19_v2_chr7_-_2883928_2883993	0.0144353	NKX3-1	ENST00000275364.3|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr15_-_59500973_59500990	0.0142439	NKX3-1	ENST00000560749.1|MYO1E|ENSG00000157483.4|myosin IE
hg19_v2_chr17_+_42422637_42422655	0.0141157	NKX3-1	ENST00000053867.3|GRN|ENSG00000030582.12|granulin 	ENST00000588143.1|GRN|ENSG00000030582.12|granulin
hg19_v2_chr14_-_39417473_39417480	0.0139548	NKX3-1	ENST00000553932.1|LINC00639|ENSG00000259070.1|long intergenic non-protein coding RNA 639
hg19_v2_chr10_+_103348031_103348092	0.0139491	NKX3-1	ENST00000370151.4|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse) 	ENST00000370147.1|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse) 	ENST00000370148.2|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse)
hg19_v2_chr14_-_47812321_47812438	0.0139427	NKX3-1	ENST00000357362.3|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2 	ENST00000486952.2|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2 	ENST00000426342.1|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2
hg19_v2_chr5_+_149877334_149877354	0.0138931	NKX3-1	ENST00000523767.1|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr4_-_1685718_1686029	0.0138508	NKX3-1	ENST00000472884.2|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A 	ENST00000489363.1|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A 	ENST00000308132.6|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A 	ENST00000463238.1|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A
hg19_v2_chr19_+_16308659_16308670	0.0138415	NKX3-1	ENST00000590263.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit 	ENST00000590756.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit 	ENST00000541844.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit
hg19_v2_chr17_+_42422662_42422678	0.0137997	NKX3-1	ENST00000593167.1|GRN|ENSG00000030582.12|granulin 	ENST00000585512.1|GRN|ENSG00000030582.12|granulin 	ENST00000591740.1|GRN|ENSG00000030582.12|granulin 	ENST00000592783.1|GRN|ENSG00000030582.12|granulin 	ENST00000587387.1|GRN|ENSG00000030582.12|granulin 	ENST00000588237.1|GRN|ENSG00000030582.12|granulin 	ENST00000589265.1|GRN|ENSG00000030582.12|granulin
hg19_v2_chrX_-_153637612_153637628	0.013783	NKX3-1	ENST00000369807.1|DNASE1L1|ENSG00000013563.9|deoxyribonuclease I-like 1 	ENST00000369808.3|DNASE1L1|ENSG00000013563.9|deoxyribonuclease I-like 1
hg19_v2_chr18_+_61445007_61445021	0.0136541	NKX3-1	ENST00000447428.1|SERPINB7|ENSG00000166396.8|serpin peptidase inhibitor, clade B (ovalbumin), member 7 	ENST00000546027.1|SERPINB7|ENSG00000166396.8|serpin peptidase inhibitor, clade B (ovalbumin), member 7
hg19_v2_chr11_-_64536521_64536543	0.0134741	NKX3-1	ENST00000486867.1|SF1|ENSG00000168066.16|splicing factor 1
hg19_v2_chr11_+_67798363_67798433	0.0134383	NKX3-1	ENST00000525628.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)
hg19_v2_chr8_-_49833978_49833996	0.0132354	NKX3-1	ENST00000020945.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr6_-_57087042_57087128	0.0131465	NKX3-1	ENST00000317483.3|RAB23|ENSG00000112210.7|RAB23, member RAS oncogene family
hg19_v2_chr11_+_71791693_71791799	0.013022	NKX3-1	ENST00000289488.2|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing 	ENST00000447974.1|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing
hg19_v2_chr3_-_48732926_48733015	0.012414	NKX3-1	ENST00000453202.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2
hg19_v2_chrX_+_114795489_114795582	0.0119741	NKX3-1	ENST00000355899.3|PLS3|ENSG00000102024.13|plastin 3 	ENST00000537301.1|PLS3|ENSG00000102024.13|plastin 3 	ENST00000289290.3|PLS3|ENSG00000102024.13|plastin 3
hg19_v2_chr22_-_50523760_50523787	0.0117985	NKX3-1	ENST00000395876.2|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr19_-_42931567_42931581	0.0117637	NKX3-1	ENST00000244289.4|LIPE|ENSG00000079435.5|lipase, hormone-sensitive
hg19_v2_chrX_+_51942963_51942963	0.0116249	NKX3-1	ENST00000375625.3|RP11-363G10.2|ENSG00000179028.4|RP11-363G10.2
hg19_v2_chr1_-_22109682_22109719	0.011618	NKX3-1	ENST00000400301.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48 	ENST00000532737.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr3_+_156799587_156799630	0.0114377	NKX3-1	ENST00000469196.1|RP11-6F2.5|ENSG00000241544.1|RP11-6F2.5
hg19_v2_chr3_+_119013185_119013306	0.011428	NKX3-1	ENST00000264245.4|ARHGAP31|ENSG00000031081.6|Rho GTPase activating protein 31
hg19_v2_chr20_-_271304_271422	0.0110395	NKX3-1	ENST00000400269.3|C20orf96|ENSG00000196476.7|chromosome 20 open reading frame 96 	ENST00000360321.2|C20orf96|ENSG00000196476.7|chromosome 20 open reading frame 96
hg19_v2_chr6_-_33771757_33771788	0.0110204	NKX3-1	ENST00000507738.1|MLN|ENSG00000096395.6|motilin 	ENST00000266003.5|MLN|ENSG00000096395.6|motilin 	ENST00000430124.2|MLN|ENSG00000096395.6|motilin
hg19_v2_chr6_-_169788480_169788504	0.010453	NKX3-1	ENST00000433388.1|RP1-137D17.1|ENSG00000226194.1|RP1-137D17.1	ENST00000440168.1|RP1-137D17.1|ENSG00000226194.1|RP1-137D17.1
hg19_v2_chr5_+_64920826_64920891	0.0102743	NKX3-1	ENST00000438419.2|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000231526.4|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000505553.1|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000545191.1|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13
hg19_v2_chr8_+_27168988_27169021	0.0102471	NKX3-1	ENST00000397501.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000338238.4|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000544172.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr14_-_59951112_59951148	0.0102104	NKX3-1	ENST00000247194.4|L3HYPDH|ENSG00000126790.7|L-3-hydroxyproline dehydratase (trans-)
hg19_v2_chr17_-_37009882_37010096	0.0101374	NKX3-1	ENST00000378096.3|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000394332.1|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000394333.1|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000577407.1|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000479035.2|RPL23|ENSG00000125691.8|ribosomal protein L23
hg19_v2_chr20_+_2821366_2821410	0.0101193	NKX3-1	ENST00000453689.1|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae) 	ENST00000417508.1|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg19_v2_chr6_-_144416737_144416766	0.0100747	NKX3-1	ENST00000367569.2|SF3B5|ENSG00000169976.5|splicing factor 3b, subunit 5, 10kDa
hg19_v2_chrX_-_153236819_153236978	0.00989626	NKX3-1	ENST00000354233.3|HCFC1|ENSG00000172534.9|host cell factor C1 (VP16-accessory protein)
hg19_v2_chr10_-_104953009_104953061	0.00964963	NKX3-1	ENST00000470299.1|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II 	ENST00000343289.5|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II
hg19_v2_chr1_+_222913009_222913031	0.00955136	NKX3-1	ENST00000456298.1|FAM177B|ENSG00000197520.6|family with sequence similarity 177, member B
hg19_v2_chr17_+_68101117_68101162	0.00946898	NKX3-1	ENST00000587698.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000587892.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr16_+_57406368_57406392	0.00946356	NKX3-1	ENST00000006053.6|CX3CL1|ENSG00000006210.6|chemokine (C-X3-C motif) ligand 1 	ENST00000563383.1|CX3CL1|ENSG00000006210.6|chemokine (C-X3-C motif) ligand 1
hg19_v2_chr3_-_178976996_178976996	0.0094172	NKX3-1	ENST00000485523.1|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v2_chr12_+_113229543_113229569	0.00931288	NKX3-1	ENST00000447659.2|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse)
hg19_v2_chr11_+_9482512_9482534	0.00914995	NKX3-1	ENST00000396602.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000530463.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000533542.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000532577.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000396597.3|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr3_-_150966902_150966933	0.00905332	NKX3-1	ENST00000424796.2|P2RY14|ENSG00000174944.4|purinergic receptor P2Y, G-protein coupled, 14
hg19_v2_chr3_+_100354442_100354464	0.00904687	NKX3-1	ENST00000475887.1|GPR128|ENSG00000144820.3|G protein-coupled receptor 128
hg19_v2_chr6_-_160210715_160210781	0.00902903	NKX3-1	ENST00000392168.2|TCP1|ENSG00000120438.7|t-complex 1 	ENST00000321394.7|TCP1|ENSG00000120438.7|t-complex 1
hg19_v2_chr2_-_162931052_162931063	0.00896474	NKX3-1	ENST00000360534.3|DPP4|ENSG00000197635.5|dipeptidyl-peptidase 4
hg19_v2_chr15_-_50558223_50558263	0.00887625	NKX3-1	ENST00000267845.3|HDC|ENSG00000140287.6|histidine decarboxylase
hg19_v2_chr8_-_49834299_49834446	0.0087816	NKX3-1	ENST00000396822.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr5_-_139937895_139937895	0.00842124	NKX3-1	ENST00000336283.6|SRA1|ENSG00000213523.5|steroid receptor RNA activator 1
hg19_v2_chr19_+_52704346_52704452	0.00824681	NKX3-1	ENST00000462990.1|PPP2R1A|ENSG00000105568.13|protein phosphatase 2, regulatory subunit A, alpha
hg19_v2_chr7_+_23221438_23221487	0.00814104	NKX3-1	ENST00000258742.5|NUPL2|ENSG00000136243.12|nucleoporin like 2
hg19_v2_chr1_+_151372010_151372055	0.00812775	NKX3-1	ENST00000290541.6|PSMB4|ENSG00000159377.6|proteasome (prosome, macropain) subunit, beta type, 4
hg19_v2_chr12_-_125398654_125398687	0.00789618	NKX3-1	ENST00000541645.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000540351.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr19_-_5719860_5719905	0.00752279	NKX3-1	ENST00000590729.1|LONP1|ENSG00000196365.7|lon peptidase 1, mitochondrial
hg19_v2_chr1_-_193029192_193029237	0.00752254	NKX3-1	ENST00000417752.1|UCHL5|ENSG00000116750.9|ubiquitin carboxyl-terminal hydrolase L5 	ENST00000367452.4|UCHL5|ENSG00000116750.9|ubiquitin carboxyl-terminal hydrolase L5
hg19_v2_chr17_-_14683517_14683523	0.00739457	NKX3-1	ENST00000379640.1|AC005863.1|ENSG00000205325.1|AC005863.1
hg19_v2_chr18_+_29769978_29769989	0.00721814	NKX3-1	ENST00000269202.6|MEP1B|ENSG00000141434.7|meprin A, beta 	ENST00000581447.1|MEP1B|ENSG00000141434.7|meprin A, beta
hg19_v2_chr12_-_92821922_92821924	0.00705822	NKX3-1	ENST00000538965.1|CLLU1OS|ENSG00000205057.3|chronic lymphocytic leukemia up-regulated 1 opposite strand 	ENST00000378487.2|CLLU1OS|ENSG00000205057.3|chronic lymphocytic leukemia up-regulated 1 opposite strand
hg19_v2_chr9_-_104145795_104145806	0.00701494	NKX3-1	ENST00000259407.2|BAAT|ENSG00000136881.7|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)
hg19_v2_chr12_+_113229452_113229461	0.0069655	NKX3-1	ENST00000389385.4|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse)
hg19_v2_chr6_+_24775641_24775710	0.00696378	NKX3-1	ENST00000378054.2|GMNN|ENSG00000112312.5|geminin, DNA replication inhibitor 	ENST00000476555.1|GMNN|ENSG00000112312.5|geminin, DNA replication inhibitor
hg19_v2_chr16_-_87970122_87970122	0.0068748	NKX3-1	ENST00000309893.2|CA5A|ENSG00000174990.3|carbonic anhydrase VA, mitochondrial
hg19_v2_chr7_-_112430647_112430776	0.00687027	NKX3-1	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr3_-_156840776_156840823	0.00667748	NKX3-1	ENST00000471357.1|LINC00880|ENSG00000243629.1|long intergenic non-protein coding RNA 880
hg19_v2_chr9_+_97766409_97766428	0.00660724	NKX3-1	ENST00000425634.2|C9orf3|ENSG00000148120.10|chromosome 9 open reading frame 3
hg19_v2_chr19_-_55791540_55791549	0.00651472	NKX3-1	ENST00000433386.2|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr20_-_45318051_45318118	0.00594036	NKX3-1	ENST00000372102.3|TP53RK|ENSG00000172315.5|TP53 regulating kinase
hg19_v2_chr5_-_176889381_176889432	0.00584292	NKX3-1	ENST00000393563.4|DBN1|ENSG00000113758.9|drebrin 1 	ENST00000512501.1|DBN1|ENSG00000113758.9|drebrin 1
hg19_v2_chr20_-_30458354_30458384	0.00581645	NKX3-1	ENST00000428829.1|DUSP15|ENSG00000149599.11|dual specificity phosphatase 15
hg19_v2_chr1_-_216596738_216596796	0.00568165	NKX3-1	ENST00000307340.3|USH2A|ENSG00000042781.8|Usher syndrome 2A (autosomal recessive, mild) 	ENST00000366943.2|USH2A|ENSG00000042781.8|Usher syndrome 2A (autosomal recessive, mild) 	ENST00000366942.3|USH2A|ENSG00000042781.8|Usher syndrome 2A (autosomal recessive, mild)
hg19_v2_chr1_-_89488510_89488565	0.00540345	NKX3-1	ENST00000564665.1|GBP3|ENSG00000117226.7|guanylate binding protein 3 	ENST00000370481.4|GBP3|ENSG00000117226.7|guanylate binding protein 3
hg19_v2_chr11_+_64073022_64073056	0.00533275	NKX3-1	ENST00000406310.1|ESRRA|ENSG00000173153.9|estrogen-related receptor alpha 	ENST00000000442.6|ESRRA|ENSG00000173153.9|estrogen-related receptor alpha 	ENST00000539594.1|ESRRA|ENSG00000173153.9|estrogen-related receptor alpha
hg19_v2_chr11_-_61687739_61687761	0.0051152	NKX3-1	ENST00000531922.1|RAB3IL1|ENSG00000167994.7|RAB3A interacting protein (rabin3)-like 1 	ENST00000301773.5|RAB3IL1|ENSG00000167994.7|RAB3A interacting protein (rabin3)-like 1
hg19_v2_chrX_-_153237258_153237295	0.0049169	NKX3-1	ENST00000310441.7|HCFC1|ENSG00000172534.9|host cell factor C1 (VP16-accessory protein)
hg19_v2_chrX_-_31285042_31285103	0.00486117	NKX3-1	ENST00000378680.2|DMD|ENSG00000198947.10|dystrophin 	ENST00000378723.3|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr19_-_1592652_1592762	0.00469195	NKX3-1	ENST00000156825.1|MBD3|ENSG00000071655.13|methyl-CpG binding domain protein 3 	ENST00000434436.3|MBD3|ENSG00000071655.13|methyl-CpG binding domain protein 3
hg19_v2_chr19_+_13080296_13080395	0.00460704	NKX3-1	ENST00000317060.2|DAND5|ENSG00000179284.4|DAN domain family member 5, BMP antagonist
hg19_v2_chr13_+_111893533_111893591	0.00458835	NKX3-1	ENST00000478679.1|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chr3_+_158991025_158991083	0.00450172	NKX3-1	ENST00000337808.6|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr6_-_83775489_83775566	0.00445767	NKX3-1	ENST00000369747.3|UBE3D|ENSG00000118420.12|ubiquitin protein ligase E3D
hg19_v2_chr17_+_45973516_45973618	0.0044563	NKX3-1	ENST00000376741.4|SP2|ENSG00000167182.11|Sp2 transcription factor
hg19_v2_chr17_+_66521936_66522026	0.00416591	NKX3-1	ENST00000592800.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr15_-_31393910_31393936	0.00415966	NKX3-1	ENST00000397795.2|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1 	ENST00000256552.6|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1 	ENST00000559179.1|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1
hg19_v2_chr10_+_18629628_18629672	0.00404179	NKX3-1	ENST00000377329.4|CACNB2|ENSG00000165995.14|calcium channel, voltage-dependent, beta 2 subunit
hg19_v2_chr1_-_160232197_160232284	0.00383113	NKX3-1	ENST00000419626.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000610139.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000475733.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000407642.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000368073.3|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000326837.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr9_+_116263639_116263707	0.00358672	NKX3-1	ENST00000343817.5|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr1_-_216978709_216978728	0.00354276	NKX3-1	ENST00000360012.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr14_+_31091511_31091547	0.00339238	NKX3-1	ENST00000544052.2|SCFD1|ENSG00000092108.16|sec1 family domain containing 1 	ENST00000421551.3|SCFD1|ENSG00000092108.16|sec1 family domain containing 1 	ENST00000541123.1|SCFD1|ENSG00000092108.16|sec1 family domain containing 1 	ENST00000557076.1|SCFD1|ENSG00000092108.16|sec1 family domain containing 1 	ENST00000553693.1|SCFD1|ENSG00000092108.16|sec1 family domain containing 1 	ENST00000396629.2|SCFD1|ENSG00000092108.16|sec1 family domain containing 1
hg19_v2_chr3_+_39509163_39509180	0.00335992	NKX3-1	ENST00000436143.2|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000441980.2|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000311042.6|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein
hg19_v2_chr7_+_33168856_33168913	0.00307223	NKX3-1	ENST00000432983.1|BBS9|ENSG00000122507.16|Bardet-Biedl syndrome 9
hg19_v2_chr13_+_24883703_24883718	0.00300222	NKX3-1	ENST00000332018.4|C1QTNF9|ENSG00000240654.2|C1q and tumor necrosis factor related protein 9
hg19_v2_chr7_+_100303676_100303719	0.00293897	NKX3-1	ENST00000303151.4|POP7|ENSG00000172336.4|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)
hg19_v2_chr13_+_24144509_24144589	0.00283061	NKX3-1	ENST00000248484.4|TNFRSF19|ENSG00000127863.11|tumor necrosis factor receptor superfamily, member 19
hg19_v2_chr11_-_26588634_26588775	0.00255466	NKX3-1	ENST00000436318.2|MUC15|ENSG00000169550.8|mucin 15, cell surface associated 	ENST00000281268.8|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr2_+_27760247_27760261	0.0025194	NKX3-1	ENST00000447166.1|AC109829.1|ENSG00000233438.1|Uncharacterized protein
hg19_v2_chr6_-_159240415_159240444	0.00251657	NKX3-1	ENST00000367075.3|EZR|ENSG00000092820.13|ezrin
hg19_v2_chr20_-_2821271_2821343	0.00251363	NKX3-1	ENST00000448755.1|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A 	ENST00000360652.2|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A
hg19_v2_chr12_-_53298841_53298867	0.00235837	NKX3-1	ENST00000293308.6|KRT8|ENSG00000170421.7|keratin 8
hg19_v2_chr11_+_108093839_108093850	0.00220137	NKX3-1	ENST00000452508.2|ATM|ENSG00000149311.13|ataxia telangiectasia mutated
hg19_v2_chr6_+_52930237_52930257	0.002124	NKX3-1	ENST00000323557.7|FBXO9|ENSG00000112146.12|F-box protein 9
hg19_v2_chr11_-_71791726_71791756	0.00208737	NKX3-1	ENST00000393695.3|NUMA1|ENSG00000137497.13|nuclear mitotic apparatus protein 1
hg19_v2_chrX_-_31284974_31284993	0.00201513	NKX3-1	ENST00000378702.4|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr15_+_63682335_63682429	0.00188834	NKX3-1	ENST00000559379.1|RP11-321G12.1|ENSG00000259459.1|RP11-321G12.1	ENST00000559821.1|RP11-321G12.1|ENSG00000259459.1|RP11-321G12.1
hg19_v2_chr8_-_135652051_135652123	0.0017767	NKX3-1	ENST00000522257.1|ZFAT|ENSG00000066827.11|zinc finger and AT hook domain containing
hg19_v2_chr1_+_84873913_84873958	0.00170354	NKX3-1	ENST00000370662.3|DNASE2B|ENSG00000137976.7|deoxyribonuclease II beta
hg19_v2_chr3_+_39509070_39509101	0.00163309	NKX3-1	ENST00000354668.4|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000428261.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000420739.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000415443.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000447324.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000383754.3|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein
hg19_v2_chrX_-_31285018_31285028	0.00162349	NKX3-1	ENST00000361471.4|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr1_-_173793246_173793312	0.00157586	NKX3-1	ENST00000345664.6|CENPL|ENSG00000120334.11|centromere protein L 	ENST00000367710.3|CENPL|ENSG00000120334.11|centromere protein L
hg19_v2_chr19_+_52074502_52074587	0.00153617	NKX3-1	ENST00000545217.1|ZNF175|ENSG00000105497.3|zinc finger protein 175 	ENST00000262259.2|ZNF175|ENSG00000105497.3|zinc finger protein 175 	ENST00000596504.1|ZNF175|ENSG00000105497.3|zinc finger protein 175
hg19_v2_chr17_+_48610074_48610107	0.00151813	NKX3-1	ENST00000503690.1|EPN3|ENSG00000049283.13|epsin 3 	ENST00000514874.1|EPN3|ENSG00000049283.13|epsin 3 	ENST00000537145.1|EPN3|ENSG00000049283.13|epsin 3 	ENST00000541226.1|EPN3|ENSG00000049283.13|epsin 3
hg19_v2_chr1_-_60392452_60392499	0.00136633	NKX3-1	ENST00000371204.3|CYP2J2|ENSG00000134716.5|cytochrome P450, family 2, subfamily J, polypeptide 2
hg19_v2_chr20_-_36661826_36661870	0.000935967	NKX3-1	ENST00000373448.2|TTI1|ENSG00000101407.8|TELO2 interacting protein 1 	ENST00000373447.3|TTI1|ENSG00000101407.8|TELO2 interacting protein 1
hg19_v2_chr11_-_46639436_46639466	0.000838998	NKX3-1	ENST00000532281.1|HARBI1|ENSG00000180423.4|harbinger transposase derived 1
hg19_v2_chr1_-_160232291_160232304	0.000837365	NKX3-1	ENST00000368074.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000447377.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr18_-_3845293_3845318	0.000769077	NKX3-1	ENST00000400145.2|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr17_-_36884451_36884451	0.000686919	NKX3-1	ENST00000595377.1|AC006449.1|ENSG00000269094.1|NS5ATP13TP1; Uncharacterized protein
hg19_v2_chr17_-_9808887_9808938	0.000638651	NKX3-1	ENST00000226193.5|RCVRN|ENSG00000109047.7|recoverin
hg19_v2_chr15_-_43876702_43876702	0.000621403	NKX3-1	ENST00000348806.6|PPIP5K1|ENSG00000168781.17|diphosphoinositol pentakisphosphate kinase 1
hg19_v2_chr5_+_138210919_138211157	0.000566724	NKX3-1	ENST00000522013.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000520260.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000523298.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000520865.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000519634.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000517533.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000523685.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000519768.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000517656.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000521683.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000521640.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000519116.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v2_chr15_+_44084040_44084155	0.000419847	NKX3-1	ENST00000249786.4|SERF2|ENSG00000140264.15|small EDRK-rich factor 2
hg19_v2_chr17_+_41150290_41150470	0.000334118	NKX3-1	ENST00000589037.1|RPL27|ENSG00000131469.8|ribosomal protein L27 	ENST00000253788.5|RPL27|ENSG00000131469.8|ribosomal protein L27
hg19_v2_chr5_-_9903938_9903991	0.000285396	NKX3-1	ENST00000511616.1|CTD-2143L24.1|ENSG00000249781.2|CTD-2143L24.1
hg19_v2_chr20_-_2821756_2821836	0.000117994	NKX3-1	ENST00000356872.3|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A 	ENST00000439542.1|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A
hg19_v2_chr19_-_55791563_55791749	0.000106165	NKX3-1	ENST00000588971.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000255631.5|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587551.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
