hg19_v2_chr8_-_124741451_124741493	1.99591	LHX3	ENST00000520519.1|ANXA13|ENSG00000104537.12|annexin A13
hg19_v2_chr4_+_155484103_155484147	1.53143	LHX3	ENST00000302068.4|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr6_-_47445214_47445308	1.47962	LHX3	ENST00000604014.1|RP11-385F7.1|ENSG00000270761.1|RP11-385F7.1
hg19_v2_chr4_+_113568207_113568367	1.39921	LHX3	ENST00000511529.1|LARP7|ENSG00000174720.11|La ribonucleoprotein domain family, member 7
hg19_v2_chr4_+_155484155_155484178	1.38008	LHX3	ENST00000509493.1|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr17_-_4938712_4938733	1.24878	LHX3	ENST00000254853.5|SLC52A1|ENSG00000132517.10|solute carrier family 52 (riboflavin transporter), member 1 	ENST00000424747.1|SLC52A1|ENSG00000132517.10|solute carrier family 52 (riboflavin transporter), member 1
hg19_v2_chr17_-_64225508_64225539	1.02687	LHX3	ENST00000205948.6|APOH|ENSG00000091583.6|apolipoprotein H (beta-2-glycoprotein I)
hg19_v2_chr6_+_26104104_26104169	0.965809	LHX3	ENST00000377803.2|HIST1H4C|ENSG00000197061.3|histone cluster 1, H4c
hg19_v2_chr19_-_49149553_49149602	0.885884	LHX3	ENST00000084798.4|CA11|ENSG00000063180.4|carbonic anhydrase XI
hg19_v2_chr12_+_49740700_49740821	0.794245	LHX3	ENST00000549441.2|DNAJC22|ENSG00000178401.10|DnaJ (Hsp40) homolog, subfamily C, member 22 	ENST00000395069.3|DNAJC22|ENSG00000178401.10|DnaJ (Hsp40) homolog, subfamily C, member 22
hg19_v2_chr12_-_118628350_118628371	0.784651	LHX3	ENST00000537952.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000537822.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr19_+_50016411_50016531	0.767559	LHX3	ENST00000426395.3|FCGRT|ENSG00000104870.8|Fc fragment of IgG, receptor, transporter, alpha 	ENST00000600273.1|FCGRT|ENSG00000104870.8|Fc fragment of IgG, receptor, transporter, alpha 	ENST00000599988.1|FCGRT|ENSG00000104870.8|Fc fragment of IgG, receptor, transporter, alpha
hg19_v2_chr9_-_128246769_128246780	0.754774	LHX3	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr19_-_51920952_51921057	0.72321	LHX3	ENST00000356298.5|SIGLEC10|ENSG00000142512.10|sialic acid binding Ig-like lectin 10 	ENST00000339313.5|SIGLEC10|ENSG00000142512.10|sialic acid binding Ig-like lectin 10 	ENST00000529627.1|SIGLEC10|ENSG00000142512.10|sialic acid binding Ig-like lectin 10 	ENST00000439889.2|SIGLEC10|ENSG00000142512.10|sialic acid binding Ig-like lectin 10 	ENST00000353836.5|SIGLEC10|ENSG00000142512.10|sialic acid binding Ig-like lectin 10 	ENST00000432469.2|SIGLEC10|ENSG00000142512.10|sialic acid binding Ig-like lectin 10
hg19_v2_chr17_+_1674982_1675041	0.713393	LHX3	ENST00000572048.1|SERPINF1|ENSG00000132386.6|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 	ENST00000573763.1|SERPINF1|ENSG00000132386.6|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
hg19_v2_chr10_+_696000_696035	0.711148	LHX3	ENST00000381489.5|PRR26|ENSG00000180525.9|proline rich 26
hg19_v2_chr1_-_150208320_150208338	0.698921	LHX3	ENST00000534220.1|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
hg19_v2_chr10_+_695888_695998	0.633724	LHX3	ENST00000441152.2|PRR26|ENSG00000180525.9|proline rich 26
hg19_v2_chr18_+_61616510_61616549	0.620901	LHX3	ENST00000408945.3|HMSD|ENSG00000221887.4|histocompatibility (minor) serpin domain containing
hg19_v2_chr17_+_68071389_68071426	0.619902	LHX3	ENST00000283936.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392671.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr19_+_50016610_50016658	0.616602	LHX3	ENST00000596975.1|FCGRT|ENSG00000104870.8|Fc fragment of IgG, receptor, transporter, alpha
hg19_v2_chr22_+_23487513_23487707	0.610703	LHX3	ENST00000263116.2|RAB36|ENSG00000100228.8|RAB36, member RAS oncogene family 	ENST00000341989.4|RAB36|ENSG00000100228.8|RAB36, member RAS oncogene family
hg19_v2_chr9_-_75567962_75567979	0.593237	LHX3	ENST00000297785.3|ALDH1A1|ENSG00000165092.8|aldehyde dehydrogenase 1 family, member A1 	ENST00000376939.1|ALDH1A1|ENSG00000165092.8|aldehyde dehydrogenase 1 family, member A1
hg19_v2_chr14_-_21566731_21566836	0.577521	LHX3	ENST00000360947.3|ZNF219|ENSG00000165804.11|zinc finger protein 219
hg19_v2_chr3_+_151591422_151591440	0.547251	LHX3	ENST00000362032.5|SUCNR1|ENSG00000198829.5|succinate receptor 1
hg19_v2_chr15_-_81195510_81195510	0.519772	LHX3	ENST00000561295.1|RP11-351M8.1|ENSG00000259649.1|Uncharacterized protein
hg19_v2_chr11_+_327171_327415	0.498492	LHX3	ENST00000534483.1|RP11-326C3.12|ENSG00000255328.1|RP11-326C3.12	ENST00000524824.1|RP11-326C3.12|ENSG00000255328.1|RP11-326C3.12	ENST00000531076.1|RP11-326C3.12|ENSG00000255328.1|RP11-326C3.12
hg19_v2_chr17_-_27418537_27418537	0.493757	LHX3	ENST00000408971.2|TIAF1|ENSG00000221995.4|TGFB1-induced anti-apoptotic factor 1
hg19_v2_chr7_+_134671234_134671324	0.479816	LHX3	ENST00000436302.2|AGBL3|ENSG00000146856.10|ATP/GTP binding protein-like 3 	ENST00000359383.3|AGBL3|ENSG00000146856.10|ATP/GTP binding protein-like 3 	ENST00000458078.1|AGBL3|ENSG00000146856.10|ATP/GTP binding protein-like 3 	ENST00000435976.2|AGBL3|ENSG00000146856.10|ATP/GTP binding protein-like 3 	ENST00000455283.2|AGBL3|ENSG00000146856.10|ATP/GTP binding protein-like 3
hg19_v2_chr1_-_150208291_150208309	0.477303	LHX3	ENST00000533654.1|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
hg19_v2_chr1_-_150208412_150208467	0.47081	LHX3	ENST00000532744.1|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 	ENST00000369114.5|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 	ENST00000369115.2|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 	ENST00000369116.4|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
hg19_v2_chr12_-_118628315_118628348	0.444617	LHX3	ENST00000540561.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr7_-_140482926_140482957	0.43847	LHX3	ENST00000496384.2|BRAF|ENSG00000157764.8|v-raf murine sarcoma viral oncogene homolog B
hg19_v2_chr9_-_215744_215893	0.42927	LHX3	ENST00000382387.2|C9orf66|ENSG00000183784.5|chromosome 9 open reading frame 66
hg19_v2_chr1_-_150208363_150208386	0.427406	LHX3	ENST00000436748.2|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
hg19_v2_chr4_-_185275104_185275133	0.415697	LHX3	ENST00000317596.3|RP11-290F5.2|ENSG00000180712.3|RP11-290F5.2
hg19_v2_chr8_-_25281747_25281779	0.411785	LHX3	ENST00000421054.2|GNRH1|ENSG00000147437.5|gonadotropin-releasing hormone 1 (luteinizing-releasing hormone)
hg19_v2_chr7_-_105332084_105332111	0.409536	LHX3	ENST00000472195.1|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr1_+_81771806_81771876	0.39486	LHX3	ENST00000370721.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370727.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370725.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370723.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370728.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370730.1|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr15_-_75748143_75748183	0.382989	LHX3	ENST00000568431.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A 	ENST00000568309.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A 	ENST00000568190.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A 	ENST00000570115.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A 	ENST00000564778.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A
hg19_v2_chr3_+_141106643_141106681	0.367706	LHX3	ENST00000514251.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr4_+_3344141_3344178	0.365576	LHX3	ENST00000306648.7|RGS12|ENSG00000159788.14|regulator of G-protein signaling 12
hg19_v2_chr19_-_6279932_6280000	0.357776	LHX3	ENST00000252674.7|MLLT1|ENSG00000130382.7|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
hg19_v2_chr16_-_28634874_28634907	0.344987	LHX3	ENST00000395609.1|SULT1A1|ENSG00000196502.7|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 	ENST00000350842.4|SULT1A1|ENSG00000196502.7|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
hg19_v2_chr7_+_30185406_30185417	0.34314	LHX3	ENST00000324489.5|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr14_-_21567009_21567173	0.342689	LHX3	ENST00000556174.1|ZNF219|ENSG00000165804.11|zinc finger protein 219 	ENST00000554478.1|ZNF219|ENSG00000165804.11|zinc finger protein 219 	ENST00000553980.1|ZNF219|ENSG00000165804.11|zinc finger protein 219 	ENST00000421093.2|ZNF219|ENSG00000165804.11|zinc finger protein 219
hg19_v2_chr10_+_104263743_104263836	0.332932	LHX3	ENST00000369902.3|SUFU|ENSG00000107882.7|suppressor of fused homolog (Drosophila) 	ENST00000369899.2|SUFU|ENSG00000107882.7|suppressor of fused homolog (Drosophila) 	ENST00000423559.2|SUFU|ENSG00000107882.7|suppressor of fused homolog (Drosophila)
hg19_v2_chr17_-_8263538_8263538	0.316048	LHX3	ENST00000535173.1|AC135178.1|ENSG00000198150.2|HCG1985372; Uncharacterized protein; cDNA FLJ37541 fis, clone BRCAN2026340
hg19_v2_chrX_+_108779004_108779015	0.30372	LHX3	ENST00000218004.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr11_-_559377_559393	0.301377	LHX3	ENST00000486629.1|C11orf35|ENSG00000185522.4|chromosome 11 open reading frame 35
hg19_v2_chr4_-_23891693_23891706	0.299576	LHX3	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr11_-_67980744_67980882	0.29471	LHX3	ENST00000401547.2|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000453170.1|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000304363.4|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila)
hg19_v2_chr4_+_95128748_95128794	0.290626	LHX3	ENST00000359052.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr17_+_35851570_35851667	0.282104	LHX3	ENST00000394386.1|DUSP14|ENSG00000161326.8|dual specificity phosphatase 14
hg19_v2_chr19_+_49199209_49199284	0.279523	LHX3	ENST00000522966.1|FUT2|ENSG00000176920.10|fucosyltransferase 2 (secretor status included) 	ENST00000425340.2|FUT2|ENSG00000176920.10|fucosyltransferase 2 (secretor status included) 	ENST00000391876.4|FUT2|ENSG00000176920.10|fucosyltransferase 2 (secretor status included)
hg19_v2_chr14_-_45252031_45252036	0.273406	LHX3	ENST00000556405.1|RP11-398E10.1|ENSG00000258998.1|RP11-398E10.1
hg19_v2_chr17_+_68071458_68071481	0.2727	LHX3	ENST00000589377.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr1_-_160549235_160549306	0.26307	LHX3	ENST00000368054.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368048.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000311224.4|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368051.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000534968.1|CD84|ENSG00000066294.10|CD84 molecule
hg19_v2_chr15_+_65843130_65843157	0.257753	LHX3	ENST00000569894.1|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1
hg19_v2_chr16_-_28937027_28937073	0.252501	LHX3	ENST00000358201.4|RABEP2|ENSG00000177548.8|rabaptin, RAB GTPase binding effector protein 2
hg19_v2_chr1_+_66820058_66820083	0.251866	LHX3	ENST00000480109.2|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific
hg19_v2_chr2_-_14541060_14541087	0.248627	LHX3	ENST00000418420.1|LINC00276|ENSG00000230448.1|long intergenic non-protein coding RNA 276 	ENST00000417751.1|LINC00276|ENSG00000230448.1|long intergenic non-protein coding RNA 276
hg19_v2_chr14_+_55494323_55494345	0.244357	LHX3	ENST00000339298.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr12_-_53994805_53994817	0.240551	LHX3	ENST00000328463.7|ATF7|ENSG00000170653.14|activating transcription factor 7
hg19_v2_chrX_+_9431324_9431371	0.232051	LHX3	ENST00000407597.2|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000424279.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000536365.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000441088.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000380961.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000415293.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr9_+_125133315_125133359	0.231094	LHX3	ENST00000223423.4|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 	ENST00000362012.2|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr14_+_21566980_21567097	0.230654	LHX3	ENST00000418511.2|TMEM253|ENSG00000232070.4|transmembrane protein 253 	ENST00000554329.2|TMEM253|ENSG00000232070.4|transmembrane protein 253
hg19_v2_chr3_+_101443476_101443515	0.225367	LHX3	ENST00000327230.4|CEP97|ENSG00000182504.6|centrosomal protein 97kDa 	ENST00000494050.1|CEP97|ENSG00000182504.6|centrosomal protein 97kDa
hg19_v2_chr7_-_22862406_22862445	0.224326	LHX3	ENST00000372879.4|TOMM7|ENSG00000196683.6|translocase of outer mitochondrial membrane 7 homolog (yeast)
hg19_v2_chr12_-_11287243_11287243	0.216813	LHX3	ENST00000539585.1|TAS2R30|ENSG00000256188.1|taste receptor, type 2, member 30
hg19_v2_chr17_-_28661065_28661080	0.215107	LHX3	ENST00000328886.4|TMIGD1|ENSG00000182271.8|transmembrane and immunoglobulin domain containing 1 	ENST00000538566.2|TMIGD1|ENSG00000182271.8|transmembrane and immunoglobulin domain containing 1
hg19_v2_chr14_-_57197224_57197273	0.2126	LHX3	ENST00000554597.1|RP11-1085N6.3|ENSG00000259133.1|Uncharacterized protein  	ENST00000556696.1|RP11-1085N6.3|ENSG00000259133.1|Uncharacterized protein
hg19_v2_chr20_+_5987890_5987904	0.208159	LHX3	ENST00000378868.4|CRLS1|ENSG00000088766.7|cardiolipin synthase 1
hg19_v2_chr3_+_148415571_148415705	0.207262	LHX3	ENST00000497524.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1 	ENST00000349243.3|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1 	ENST00000542281.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1 	ENST00000418473.2|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1 	ENST00000404754.2|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1
hg19_v2_chrX_+_24167746_24167811	0.19339	LHX3	ENST00000428571.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000539115.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked
hg19_v2_chr11_-_67981046_67981159	0.188843	LHX3	ENST00000402789.1|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000402185.2|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000458496.1|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila)
hg19_v2_chr4_+_41937131_41937211	0.185939	LHX3	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr6_+_114178512_114178586	0.181585	LHX3	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr15_+_75970672_75970672	0.181502	LHX3	ENST00000435356.1|AC105020.1|ENSG00000203392.2|Uncharacterized protein; cDNA FLJ12988 fis, clone NT2RP3000080
hg19_v2_chr19_+_11457232_11457257	0.178961	LHX3	ENST00000587531.1|CCDC159|ENSG00000183401.7|coiled-coil domain containing 159
hg19_v2_chr5_+_81601166_81601166	0.172384	LHX3	ENST00000439350.1|ATP6AP1L|ENSG00000205464.7|ATPase, H+ transporting, lysosomal accessory protein 1-like
hg19_v2_chr2_+_54785485_54785538	0.172009	LHX3	ENST00000333896.5|SPTBN1|ENSG00000115306.11|spectrin, beta, non-erythrocytic 1
hg19_v2_chr3_+_69812877_69812962	0.167583	LHX3	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr10_-_115904361_115904375	0.167254	LHX3	ENST00000428953.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118 	ENST00000543782.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118
hg19_v2_chr17_-_72772425_72772445	0.165589	LHX3	ENST00000578822.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative)
hg19_v2_chr2_+_135596180_135596193	0.162251	LHX3	ENST00000283054.4|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase 	ENST00000392928.1|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase
hg19_v2_chr14_+_88852059_88852163	0.15837	LHX3	ENST00000045347.7|SPATA7|ENSG00000042317.12|spermatogenesis associated 7
hg19_v2_chr5_-_43557791_43557860	0.147352	LHX3	ENST00000338972.4|PAIP1|ENSG00000172239.9|poly(A) binding protein interacting protein 1 	ENST00000511321.1|PAIP1|ENSG00000172239.9|poly(A) binding protein interacting protein 1 	ENST00000515338.1|PAIP1|ENSG00000172239.9|poly(A) binding protein interacting protein 1
hg19_v2_chr10_-_74283694_74283749	0.136434	LHX3	ENST00000398763.4|MICU1|ENSG00000107745.12|mitochondrial calcium uptake 1 	ENST00000418483.2|MICU1|ENSG00000107745.12|mitochondrial calcium uptake 1 	ENST00000489666.2|MICU1|ENSG00000107745.12|mitochondrial calcium uptake 1
hg19_v2_chr9_+_35042205_35042266	0.132987	LHX3	ENST00000312292.5|C9orf131|ENSG00000174038.8|chromosome 9 open reading frame 131 	ENST00000378745.3|C9orf131|ENSG00000174038.8|chromosome 9 open reading frame 131
hg19_v2_chr7_+_30185496_30185513	0.13123	LHX3	ENST00000455738.1|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr7_+_138915102_138915102	0.126979	LHX3	ENST00000486663.1|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr3_-_47517302_47517451	0.125689	LHX3	ENST00000441517.2|SCAP|ENSG00000114650.14|SREBF chaperone 	ENST00000545718.1|SCAP|ENSG00000114650.14|SREBF chaperone
hg19_v2_chr8_-_30670384_30670394	0.116079	LHX3	ENST00000221138.4|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme 	ENST00000518243.1|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme
hg19_v2_chr5_-_16916624_16916641	0.110855	LHX3	ENST00000513882.1|MYO10|ENSG00000145555.10|myosin X
hg19_v2_chr18_-_21852143_21852205	0.107305	LHX3	ENST00000399443.3|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr3_-_145940126_145940158	0.0965345	LHX3	ENST00000498625.1|PLSCR4|ENSG00000114698.10|phospholipid scramblase 4
hg19_v2_chr2_-_188312971_188312987	0.0922864	LHX3	ENST00000410068.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like 	ENST00000447403.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like 	ENST00000410102.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like
hg19_v2_chr2_-_228582709_228582754	0.0869467	LHX3	ENST00000541617.1|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3 	ENST00000409456.2|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3 	ENST00000409287.1|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3 	ENST00000258403.3|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3
hg19_v2_chr2_-_99279928_99279942	0.0851935	LHX3	ENST00000414521.2|MGAT4A|ENSG00000071073.8|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v2_chr3_-_141719195_141719215	0.0807712	LHX3	ENST00000397991.4|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr20_-_656823_656902	0.076809	LHX3	ENST00000246104.6|SCRT2|ENSG00000215397.3|scratch family zinc finger 2
hg19_v2_chr7_-_87342564_87342617	0.0699547	LHX3	ENST00000265724.3|ABCB1|ENSG00000085563.10|ATP-binding cassette, sub-family B (MDR/TAP), member 1 	ENST00000416177.1|ABCB1|ENSG00000085563.10|ATP-binding cassette, sub-family B (MDR/TAP), member 1
hg19_v2_chr8_-_66750978_66750987	0.0573417	LHX3	ENST00000523253.1|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr19_+_11457175_11457224	0.0508512	LHX3	ENST00000458408.1|CCDC159|ENSG00000183401.7|coiled-coil domain containing 159 	ENST00000586451.1|CCDC159|ENSG00000183401.7|coiled-coil domain containing 159 	ENST00000588592.1|CCDC159|ENSG00000183401.7|coiled-coil domain containing 159
hg19_v2_chrX_+_24167828_24167907	0.0491618	LHX3	ENST00000379188.3|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000419690.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000379177.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000304543.5|ZFX|ENSG00000005889.11|zinc finger protein, X-linked
hg19_v2_chr17_-_39623681_39623681	0.0482052	LHX3	ENST00000225899.3|KRT32|ENSG00000108759.3|keratin 32
hg19_v2_chr4_+_186990298_186990342	0.0411024	LHX3	ENST00000296795.3|TLR3|ENSG00000164342.8|toll-like receptor 3 	ENST00000513189.1|TLR3|ENSG00000164342.8|toll-like receptor 3
hg19_v2_chr17_-_72772462_72772511	0.0384127	LHX3	ENST00000582870.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000581136.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000357814.3|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000579218.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000583476.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000580301.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000583757.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000582524.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative)
hg19_v2_chr1_-_150944411_150944443	0.0374939	LHX3	ENST00000368949.4|CERS2|ENSG00000143418.15|ceramide synthase 2
hg19_v2_chr6_+_153019023_153019043	0.0355853	LHX3	ENST00000367245.5|MYCT1|ENSG00000120279.6|myc target 1 	ENST00000529453.1|MYCT1|ENSG00000120279.6|myc target 1
hg19_v2_chr6_+_130339710_130339745	0.0339744	LHX3	ENST00000526087.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000533560.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000361794.2|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila)
hg19_v2_chr19_+_14693888_14693955	0.0288117	LHX3	ENST00000547437.1|CLEC17A|ENSG00000187912.7|C-type lectin domain family 17, member A 	ENST00000397439.2|CLEC17A|ENSG00000187912.7|C-type lectin domain family 17, member A 	ENST00000417570.1|CLEC17A|ENSG00000187912.7|C-type lectin domain family 17, member A
hg19_v2_chr3_+_186692745_186692824	0.0209264	LHX3	ENST00000438590.1|ST6GAL1|ENSG00000073849.10|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v2_chr14_+_55493920_55494013	0.0207825	LHX3	ENST00000395472.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4 	ENST00000555846.1|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr16_+_28565230_28565257	0.0196749	LHX3	ENST00000317058.3|CCDC101|ENSG00000176476.4|coiled-coil domain containing 101
hg19_v2_chr1_+_244214577_244214593	0.0172188	LHX3	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr7_-_36764142_36764157	0.014231	LHX3	ENST00000258749.5|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil) 	ENST00000535891.1|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil)
hg19_v2_chr18_-_21891460_21891506	0.00985655	LHX3	ENST00000357041.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr5_+_55149150_55149200	0.0041171	LHX3	ENST00000297015.3|IL31RA|ENSG00000164509.9|interleukin 31 receptor A
hg19_v2_chr19_+_48949087_48949116	0.00400183	LHX3	ENST00000598711.1|GRWD1|ENSG00000105447.8|glutamate-rich WD repeat containing 1
hg19_v2_chr5_-_173217931_173217955	0.00154033	LHX3	ENST00000522731.1|CTB-43E15.4|ENSG00000254211.1|CTB-43E15.4
