hg19_v2_chr7_-_92777606_92777723	0.384673	HOXD9	ENST00000437805.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000446959.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000439952.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000414791.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000446033.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000411955.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000318238.4|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like
hg19_v2_chr5_+_68860949_68860949	0.293641	HOXD9	ENST00000507595.1|GTF2H2C|ENSG00000183474.11|general transcription factor IIH, polypeptide 2C
hg19_v2_chr13_-_41111323_41111323	0.283353	HOXD9	ENST00000595486.1|AL133318.1|ENSG00000269120.1|Uncharacterized protein
hg19_v2_chr13_+_111748183_111748203	0.261911	HOXD9	ENST00000422994.1|LINC00368|ENSG00000225870.1|long intergenic non-protein coding RNA 368
hg19_v2_chr10_+_86184676_86184714	0.221487	HOXD9	ENST00000543283.1|CCSER2|ENSG00000107771.11|coiled-coil serine-rich protein 2
hg19_v2_chr6_-_18249971_18250012	0.220993	HOXD9	ENST00000507591.1|DEK|ENSG00000124795.10|DEK oncogene
hg19_v2_chr1_-_238108575_238108575	0.217625	HOXD9	ENST00000604646.1|MTRNR2L11|ENSG00000270188.1|MT-RNR2-like 11 (pseudogene)
hg19_v2_chr11_-_104905840_104905977	0.215812	HOXD9	ENST00000526568.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000393136.4|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000531166.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000534497.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000527979.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000446369.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000353247.5|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000528974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000533400.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525825.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000436863.3|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase
hg19_v2_chr7_+_90012986_90013035	0.213819	HOXD9	ENST00000416322.1|CLDN12|ENSG00000157224.11|claudin 12
hg19_v2_chr16_-_18887627_18887627	0.210205	HOXD9	ENST00000563235.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr2_+_143635067_143635211	0.2094	HOXD9	ENST00000264170.4|KYNU|ENSG00000115919.10|kynureninase
hg19_v2_chr17_+_60447579_60447579	0.209068	HOXD9	ENST00000450662.2|EFCAB3|ENSG00000172421.3|EF-hand calcium binding domain 3
hg19_v2_chr7_+_13141010_13141018	0.208251	HOXD9	ENST00000443947.1|AC011288.2|ENSG00000229618.1|AC011288.2
hg19_v2_chr7_+_123469037_123469037	0.197007	HOXD9	ENST00000489978.1|HYAL4|ENSG00000106302.5|hyaluronoglucosaminidase 4
hg19_v2_chr15_+_49913175_49913178	0.193057	HOXD9	ENST00000403028.3|DTWD1|ENSG00000104047.10|DTW domain containing 1
hg19_v2_chr14_+_57671888_57671888	0.191872	HOXD9	ENST00000391612.1|AL391152.1|ENSG00000212928.1|AL391152.1
hg19_v2_chr2_+_27282134_27282228	0.185827	HOXD9	ENST00000441931.1|AGBL5|ENSG00000084693.11|ATP/GTP binding protein-like 5
hg19_v2_chr13_-_81801115_81801122	0.184799	HOXD9	ENST00000567258.1|LINC00564|ENSG00000260094.1|long intergenic non-protein coding RNA 564
hg19_v2_chr21_-_39705286_39705316	0.181156	HOXD9	ENST00000414189.1|AP001422.3|ENSG00000231231.1|AP001422.3
hg19_v2_chr8_+_101349823_101349862	0.17506	HOXD9	ENST00000519566.1|KB-1991G8.1|ENSG00000253217.1|KB-1991G8.1
hg19_v2_chr5_-_159766528_159766580	0.17136	HOXD9	ENST00000505287.2|CCNJL|ENSG00000135083.10|cyclin J-like
hg19_v2_chr7_-_130353553_130353598	0.169874	HOXD9	ENST00000330992.7|COPG2|ENSG00000158623.10|coatomer protein complex, subunit gamma 2 	ENST00000445977.2|COPG2|ENSG00000158623.10|coatomer protein complex, subunit gamma 2
hg19_v2_chr12_-_7245152_7245203	0.169603	HOXD9	ENST00000542220.2|C1R|ENSG00000159403.11|complement component 1, r subcomponent
hg19_v2_chr4_+_74606223_74606293	0.167592	HOXD9	ENST00000307407.3|IL8|ENSG00000169429.6|interleukin 8 	ENST00000401931.1|IL8|ENSG00000169429.6|interleukin 8
hg19_v2_chr12_+_28605426_28605475	0.164764	HOXD9	ENST00000542801.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91
hg19_v2_chr12_-_10007448_10007448	0.164121	HOXD9	ENST00000538152.1|CLEC2B|ENSG00000110852.4|C-type lectin domain family 2, member B
hg19_v2_chr3_-_139258521_139258671	0.16412	HOXD9	ENST00000483943.2|RBP1|ENSG00000114115.5|retinol binding protein 1, cellular 	ENST00000232219.2|RBP1|ENSG00000114115.5|retinol binding protein 1, cellular 	ENST00000492918.1|RBP1|ENSG00000114115.5|retinol binding protein 1, cellular
hg19_v2_chr2_-_118943930_118943963	0.159028	HOXD9	ENST00000449075.1|AC093901.1|ENSG00000226856.1|AC093901.1	ENST00000414886.1|AC093901.1|ENSG00000226856.1|AC093901.1	ENST00000449819.1|AC093901.1|ENSG00000226856.1|AC093901.1
hg19_v2_chr19_-_51143075_51143143	0.155467	HOXD9	ENST00000600079.1|SYT3|ENSG00000213023.5|synaptotagmin III 	ENST00000593901.1|SYT3|ENSG00000213023.5|synaptotagmin III
hg19_v2_chr6_+_131894284_131894378	0.153555	HOXD9	ENST00000368087.3|ARG1|ENSG00000118520.9|arginase 1 	ENST00000356962.2|ARG1|ENSG00000118520.9|arginase 1
hg19_v2_chr14_+_39583427_39583542	0.151722	HOXD9	ENST00000308317.6|GEMIN2|ENSG00000092208.12|gem (nuclear organelle) associated protein 2 	ENST00000396249.2|GEMIN2|ENSG00000092208.12|gem (nuclear organelle) associated protein 2 	ENST00000250379.8|GEMIN2|ENSG00000092208.12|gem (nuclear organelle) associated protein 2 	ENST00000534684.2|GEMIN2|ENSG00000092208.12|gem (nuclear organelle) associated protein 2 	ENST00000527381.1|GEMIN2|ENSG00000092208.12|gem (nuclear organelle) associated protein 2
hg19_v2_chr17_-_54893250_54893278	0.151453	HOXD9	ENST00000397862.2|C17orf67|ENSG00000214226.4|chromosome 17 open reading frame 67
hg19_v2_chrX_-_77150911_77150960	0.146275	HOXD9	ENST00000373336.3|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr14_+_65878650_65878661	0.142436	HOXD9	ENST00000555559.1|FUT8|ENSG00000033170.12|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg19_v2_chr12_+_19358192_19358212	0.138248	HOXD9	ENST00000538305.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5
hg19_v2_chr2_+_210518057_210518117	0.137528	HOXD9	ENST00000452717.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr11_-_104972158_104972190	0.136991	HOXD9	ENST00000598974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000593315.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000594519.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000415981.2|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525374.1|CARD16|ENSG00000204397.3|caspase recruitment domain family, member 16 	ENST00000375707.1|CARD17|ENSG00000255221.2|caspase recruitment domain family, member 17
hg19_v2_chr9_-_75488984_75489052	0.136728	HOXD9	ENST00000423171.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1	ENST00000449235.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1	ENST00000453787.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1
hg19_v2_chr6_+_32812568_32812631	0.135806	HOXD9	ENST00000414474.1|PSMB9|ENSG00000240065.3|proteasome (prosome, macropain) subunit, beta type, 9
hg19_v2_chr22_-_19466643_19466667	0.135201	HOXD9	ENST00000474226.1|UFD1L|ENSG00000070010.14|ubiquitin fusion degradation 1 like (yeast)
hg19_v2_chr22_+_19118321_19118321	0.133406	HOXD9	ENST00000399635.2|TSSK2|ENSG00000206203.3|testis-specific serine kinase 2
hg19_v2_chr2_-_70417827_70417854	0.130814	HOXD9	ENST00000457952.1|C2orf42|ENSG00000115998.3|chromosome 2 open reading frame 42
hg19_v2_chr7_+_120629653_120629833	0.130152	HOXD9	ENST00000450913.2|CPED1|ENSG00000106034.13|cadherin-like and PC-esterase domain containing 1 	ENST00000340646.5|CPED1|ENSG00000106034.13|cadherin-like and PC-esterase domain containing 1
hg19_v2_chr4_+_186990298_186990342	0.126715	HOXD9	ENST00000296795.3|TLR3|ENSG00000164342.8|toll-like receptor 3 	ENST00000513189.1|TLR3|ENSG00000164342.8|toll-like receptor 3
hg19_v2_chr19_+_50148087_50148275	0.126703	HOXD9	ENST00000601038.1|SCAF1|ENSG00000126461.10|SR-related CTD-associated factor 1 	ENST00000595242.1|SCAF1|ENSG00000126461.10|SR-related CTD-associated factor 1
hg19_v2_chrX_-_109590174_109590203	0.125897	HOXD9	ENST00000372054.1|GNG5P2|ENSG00000133136.3|guanine nucleotide binding protein (G protein), gamma 5 pseudogene 2
hg19_v2_chr15_-_49913126_49913158	0.125303	HOXD9	ENST00000561064.1|FAM227B|ENSG00000166262.11|family with sequence similarity 227, member B 	ENST00000299338.6|FAM227B|ENSG00000166262.11|family with sequence similarity 227, member B
hg19_v2_chr8_+_52730143_52730143	0.125189	HOXD9	ENST00000415643.1|AC090186.1|ENSG00000232941.1|Uncharacterized protein
hg19_v2_chr7_+_6713376_6713424	0.124637	HOXD9	ENST00000399484.3|AC073343.1|ENSG00000198580.6|Uncharacterized protein  	ENST00000544825.1|AC073343.1|ENSG00000198580.6|Uncharacterized protein  	ENST00000401847.1|AC073343.1|ENSG00000198580.6|Uncharacterized protein
hg19_v2_chr5_+_135496675_135496725	0.121913	HOXD9	ENST00000507637.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr2_-_55647057_55647082	0.119192	HOXD9	ENST00000436346.1|CCDC88A|ENSG00000115355.11|coiled-coil domain containing 88A
hg19_v2_chr14_+_65878565_65878632	0.117597	HOXD9	ENST00000556518.1|FUT8|ENSG00000033170.12|fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 	ENST00000557164.1|FUT8|ENSG00000033170.12|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg19_v2_chr14_+_62164340_62164443	0.115863	HOXD9	ENST00000557538.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 	ENST00000539097.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v2_chr10_+_17794251_17794260	0.113982	HOXD9	ENST00000377495.1|TMEM236|ENSG00000148483.7|transmembrane protein 236 	ENST00000338221.5|TMEM236|ENSG00000148483.7|transmembrane protein 236
hg19_v2_chr4_-_185395191_185395340	0.112827	HOXD9	ENST00000510814.1|IRF2|ENSG00000168310.6|interferon regulatory factor 2 	ENST00000507523.1|IRF2|ENSG00000168310.6|interferon regulatory factor 2 	ENST00000506230.1|IRF2|ENSG00000168310.6|interferon regulatory factor 2
hg19_v2_chr7_-_92146729_92146876	0.106595	HOXD9	ENST00000541751.1|PEX1|ENSG00000127980.11|peroxisomal biogenesis factor 1
hg19_v2_chr2_+_143635222_143635240	0.10567	HOXD9	ENST00000375773.2|KYNU|ENSG00000115919.10|kynureninase 	ENST00000409512.1|KYNU|ENSG00000115919.10|kynureninase 	ENST00000410015.2|KYNU|ENSG00000115919.10|kynureninase
hg19_v2_chr2_-_158182105_158182171	0.103841	HOXD9	ENST00000409925.1|ERMN|ENSG00000136541.10|ermin, ERM-like protein
hg19_v2_chr5_+_127039075_127039098	0.103042	HOXD9	ENST00000514853.2|CTC-228N24.1|ENSG00000230561.3|CTC-228N24.1
hg19_v2_chr6_+_1312675_1312701	0.102323	HOXD9	ENST00000296839.2|FOXQ1|ENSG00000164379.4|forkhead box Q1
hg19_v2_chr3_+_107602030_107602095	0.100885	HOXD9	ENST00000494231.1|LINC00636|ENSG00000240423.1|long intergenic non-protein coding RNA 636
hg19_v2_chr1_+_212475148_212475207	0.0989962	HOXD9	ENST00000537030.3|PPP2R5A|ENSG00000066027.7|protein phosphatase 2, regulatory subunit B', alpha
hg19_v2_chr1_+_16083098_16083119	0.0984268	HOXD9	ENST00000496928.2|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1 	ENST00000508310.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1
hg19_v2_chr5_+_140588269_140588299	0.097622	HOXD9	ENST00000541609.1|PCDHB12|ENSG00000120328.4|protocadherin beta 12 	ENST00000239450.2|PCDHB12|ENSG00000120328.4|protocadherin beta 12
hg19_v2_chr13_-_44735393_44735393	0.0963679	HOXD9	ENST00000400419.1|SMIM2|ENSG00000139656.5|small integral membrane protein 2
hg19_v2_chr8_+_119294456_119294486	0.0931862	HOXD9	ENST00000366457.2|AC023590.1|ENSG00000225885.2|Uncharacterized protein
hg19_v2_chr2_-_158182322_158182358	0.0911443	HOXD9	ENST00000420719.2|ERMN|ENSG00000136541.10|ermin, ERM-like protein 	ENST00000409216.1|ERMN|ENSG00000136541.10|ermin, ERM-like protein
hg19_v2_chr20_+_5987890_5987904	0.0910308	HOXD9	ENST00000378868.4|CRLS1|ENSG00000088766.7|cardiolipin synthase 1
hg19_v2_chr4_+_69962212_69962229	0.0904082	HOXD9	ENST00000508661.1|UGT2B7|ENSG00000171234.9|UDP glucuronosyltransferase 2 family, polypeptide B7
hg19_v2_chr1_+_202385953_202385994	0.0900321	HOXD9	ENST00000466968.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr4_-_76944621_76944671	0.0888268	HOXD9	ENST00000306602.1|CXCL10|ENSG00000169245.4|chemokine (C-X-C motif) ligand 10
hg19_v2_chr16_+_53483983_53483994	0.0874648	HOXD9	ENST00000544545.1|RBL2|ENSG00000103479.10|retinoblastoma-like 2 (p130)
hg19_v2_chr11_+_12115543_12115572	0.086947	HOXD9	ENST00000537344.1|MICAL2|ENSG00000133816.9|microtubule associated monooxygenase, calponin and LIM domain containing 2 	ENST00000532179.1|MICAL2|ENSG00000133816.9|microtubule associated monooxygenase, calponin and LIM domain containing 2 	ENST00000526065.1|MICAL2|ENSG00000133816.9|microtubule associated monooxygenase, calponin and LIM domain containing 2
hg19_v2_chr2_-_55646957_55647027	0.0863444	HOXD9	ENST00000263630.8|CCDC88A|ENSG00000115355.11|coiled-coil domain containing 88A
hg19_v2_chr8_-_90993869_90993920	0.0860621	HOXD9	ENST00000517772.1|NBN|ENSG00000104320.9|nibrin
hg19_v2_chr18_+_21452804_21452910	0.0849333	HOXD9	ENST00000269217.6|LAMA3|ENSG00000053747.11|laminin, alpha 3
hg19_v2_chr1_+_219347203_219347233	0.0839531	HOXD9	ENST00000366927.3|LYPLAL1|ENSG00000143353.7|lysophospholipase-like 1
hg19_v2_chr1_+_149239529_149239531	0.0824014	HOXD9	ENST00000457216.2|RP11-403I13.4|ENSG00000223779.4|RP11-403I13.4
hg19_v2_chr20_+_9146969_9147005	0.0823389	HOXD9	ENST00000416836.1|PLCB4|ENSG00000101333.12|phospholipase C, beta 4
hg19_v2_chr11_+_123986069_123986169	0.0818283	HOXD9	ENST00000456829.2|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000361352.5|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000449321.1|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000392748.1|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000360334.4|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000392744.4|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A
hg19_v2_chr5_-_147211226_147211349	0.0813687	HOXD9	ENST00000296695.5|SPINK1|ENSG00000164266.6|serine peptidase inhibitor, Kazal type 1
hg19_v2_chr5_-_65018834_65018863	0.0812874	HOXD9	ENST00000506816.1|SGTB|ENSG00000197860.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
hg19_v2_chr13_+_76413852_76413884	0.0811586	HOXD9	ENST00000533809.2|LMO7|ENSG00000136153.15|LIM domain 7
hg19_v2_chr6_-_31632962_31632997	0.0807204	HOXD9	ENST00000456540.1|GPANK1|ENSG00000204438.6|G patch domain and ankyrin repeats 1 	ENST00000445768.1|GPANK1|ENSG00000204438.6|G patch domain and ankyrin repeats 1
hg19_v2_chr6_+_24775153_24775242	0.078335	HOXD9	ENST00000356509.3|GMNN|ENSG00000112312.5|geminin, DNA replication inhibitor 	ENST00000230056.3|GMNN|ENSG00000112312.5|geminin, DNA replication inhibitor
hg19_v2_chr1_+_45140360_45140399	0.0770686	HOXD9	ENST00000418644.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000458657.2|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000441519.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000535358.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000445071.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228
hg19_v2_chr18_-_57027194_57027194	0.0768119	HOXD9	ENST00000251047.5|LMAN1|ENSG00000074695.5|lectin, mannose-binding, 1
hg19_v2_chrY_+_14958970_14958970	0.0765974	HOXD9	ENST00000453031.1|USP9Y|ENSG00000114374.8|ubiquitin specific peptidase 9, Y-linked
hg19_v2_chr11_+_69924639_69924664	0.075911	HOXD9	ENST00000538023.1|ANO1|ENSG00000131620.13|anoctamin 1, calcium activated chloride channel 	ENST00000398543.2|ANO1|ENSG00000131620.13|anoctamin 1, calcium activated chloride channel
hg19_v2_chr8_+_79503458_79503473	0.0749057	HOXD9	ENST00000518467.1|PKIA|ENSG00000171033.8|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg19_v2_chr4_+_37455536_37455610	0.0742817	HOXD9	ENST00000381980.4|C4orf19|ENSG00000154274.10|chromosome 4 open reading frame 19 	ENST00000508175.1|C4orf19|ENSG00000154274.10|chromosome 4 open reading frame 19
hg19_v2_chrX_+_36246735_36246735	0.0739344	HOXD9	ENST00000378653.3|CXorf30|ENSG00000205081.4|chromosome X open reading frame 30
hg19_v2_chr6_+_130339710_130339745	0.0723527	HOXD9	ENST00000526087.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000533560.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000361794.2|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila)
hg19_v2_chr7_-_122339162_122339210	0.0723253	HOXD9	ENST00000340112.2|RNF133|ENSG00000188050.2|ring finger protein 133
hg19_v2_chr6_-_133055815_133055834	0.0720755	HOXD9	ENST00000509351.1|VNN3|ENSG00000093134.9|vanin 3 	ENST00000417437.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000414302.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000423615.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000427187.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000275223.3|VNN3|ENSG00000093134.9|vanin 3 	ENST00000519686.2|VNN3|ENSG00000093134.9|vanin 3
hg19_v2_chr17_+_9479944_9479965	0.0720393	HOXD9	ENST00000396219.3|WDR16|ENSG00000166596.10|WD repeat domain 16 	ENST00000352665.5|WDR16|ENSG00000166596.10|WD repeat domain 16
hg19_v2_chr6_+_131958436_131958525	0.0716843	HOXD9	ENST00000357639.3|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000543135.1|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000427148.2|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000358229.5|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3
hg19_v2_chr12_-_91546926_91546972	0.0693171	HOXD9	ENST00000550758.1|DCN|ENSG00000011465.12|decorin
hg19_v2_chr1_-_213020991_213020991	0.0692566	HOXD9	ENST00000332912.3|C1orf227|ENSG00000185523.6|chromosome 1 open reading frame 227
hg19_v2_chr2_+_145780739_145780759	0.069122	HOXD9	ENST00000597173.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000602108.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000420472.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding)
hg19_v2_chr11_-_46639436_46639466	0.0690578	HOXD9	ENST00000532281.1|HARBI1|ENSG00000180423.4|harbinger transposase derived 1
hg19_v2_chr4_-_168155730_168155740	0.0681778	HOXD9	ENST00000502330.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000357154.3|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr4_+_39640787_39640834	0.0681349	HOXD9	ENST00000532680.1|RP11-539G18.2|ENSG00000255458.1|RP11-539G18.2
hg19_v2_chr15_+_58430368_58430401	0.0672285	HOXD9	ENST00000558772.1|AQP9|ENSG00000103569.5|aquaporin 9 	ENST00000219919.4|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr10_-_115614127_115614176	0.0670995	HOXD9	ENST00000369305.1|DCLRE1A|ENSG00000198924.3|DNA cross-link repair 1A
hg19_v2_chr5_-_111093167_111093252	0.0651801	HOXD9	ENST00000446294.2|NREP|ENSG00000134986.9|neuronal regeneration related protein 	ENST00000419114.2|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr2_+_114647504_114647557	0.0645815	HOXD9	ENST00000263238.2|ACTR3|ENSG00000115091.7|ARP3 actin-related protein 3 homolog (yeast)
hg19_v2_chr6_-_49712123_49712134	0.0644445	HOXD9	ENST00000263045.4|CRISP3|ENSG00000096006.7|cysteine-rich secretory protein 3
hg19_v2_chr17_+_61086917_61086921	0.0644065	HOXD9	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr6_-_131321863_131321907	0.0620212	HOXD9	ENST00000528282.1|EPB41L2|ENSG00000079819.12|erythrocyte membrane protein band 4.1-like 2
hg19_v2_chr3_+_140981456_140981508	0.0617285	HOXD9	ENST00000504264.1|ACPL2|ENSG00000155893.7|acid phosphatase-like 2
hg19_v2_chr2_+_143886877_143886888	0.0616377	HOXD9	ENST00000295095.6|ARHGAP15|ENSG00000075884.8|Rho GTPase activating protein 15
hg19_v2_chr18_-_74728998_74729051	0.0597133	HOXD9	ENST00000359645.3|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397875.3|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397869.3|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000578193.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000578873.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397866.4|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000528160.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000527041.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000526111.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397865.5|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000382582.3|MBP|ENSG00000197971.10|myelin basic protein
hg19_v2_chr14_+_62462541_62462541	0.0590646	HOXD9	ENST00000430451.2|SYT16|ENSG00000139973.11|synaptotagmin XVI
hg19_v2_chr4_+_169575875_169575902	0.0584819	HOXD9	ENST00000503457.1|PALLD|ENSG00000129116.13|palladin, cytoskeletal associated protein
hg19_v2_chr13_-_33924755_33924822	0.058376	HOXD9	ENST00000439831.1|STARD13|ENSG00000133121.16|StAR-related lipid transfer (START) domain containing 13 	ENST00000567873.1|STARD13|ENSG00000133121.16|StAR-related lipid transfer (START) domain containing 13
hg19_v2_chr21_-_39705323_39705343	0.0574065	HOXD9	ENST00000436845.1|AP001422.3|ENSG00000231231.1|AP001422.3
hg19_v2_chr22_+_50609150_50609199	0.0560238	HOXD9	ENST00000159647.5|PANX2|ENSG00000073150.9|pannexin 2 	ENST00000395842.2|PANX2|ENSG00000073150.9|pannexin 2
hg19_v2_chr21_+_35736302_35736323	0.0557939	HOXD9	ENST00000290310.3|KCNE2|ENSG00000159197.3|potassium voltage-gated channel, Isk-related family, member 2
hg19_v2_chr1_+_198608146_198608247	0.0556242	HOXD9	ENST00000367376.2|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000352140.3|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000594404.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000598951.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000530727.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000442510.2|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000367367.4|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000348564.6|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000367364.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000413409.2|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C
hg19_v2_chr6_-_28220002_28220020	0.0553944	HOXD9	ENST00000377294.2|ZKSCAN4|ENSG00000187626.7|zinc finger with KRAB and SCAN domains 4
hg19_v2_chr3_-_107777208_107777236	0.055222	HOXD9	ENST00000398258.3|CD47|ENSG00000196776.10|CD47 molecule
hg19_v2_chr12_-_9268707_9268758	0.0548125	HOXD9	ENST00000318602.7|A2M|ENSG00000175899.10|alpha-2-macroglobulin
hg19_v2_chr1_+_104615595_104615645	0.0546641	HOXD9	ENST00000418362.1|RP11-364B6.1|ENSG00000215869.3|RP11-364B6.1
hg19_v2_chrX_+_36254051_36254051	0.054266	HOXD9	ENST00000378657.4|CXorf30|ENSG00000205081.4|chromosome X open reading frame 30
hg19_v2_chr13_+_51483814_51483935	0.0542141	HOXD9	ENST00000336617.3|RNASEH2B|ENSG00000136104.14|ribonuclease H2, subunit B 	ENST00000422660.1|RNASEH2B|ENSG00000136104.14|ribonuclease H2, subunit B
hg19_v2_chr19_-_5903714_5903809	0.0536435	HOXD9	ENST00000586349.1|AC024592.12|ENSG00000267740.1|Uncharacterized protein  	ENST00000585661.1|AC024592.12|ENSG00000267740.1|Uncharacterized protein  	ENST00000308961.4|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000592634.1|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000418389.2|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000252675.5|FUT5|ENSG00000130383.6|fucosyltransferase 5 (alpha (1,3) fucosyltransferase)
hg19_v2_chr15_+_58430567_58430589	0.0522585	HOXD9	ENST00000536493.1|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr11_-_102401469_102401488	0.0499259	HOXD9	ENST00000260227.4|MMP7|ENSG00000137673.4|matrix metallopeptidase 7 (matrilysin, uterine)
hg19_v2_chrX_-_77150985_77151090	0.0496931	HOXD9	ENST00000358075.6|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr5_-_96518907_96518997	0.0490783	HOXD9	ENST00000508447.1|RIOK2|ENSG00000058729.6|RIO kinase 2 	ENST00000283109.3|RIOK2|ENSG00000058729.6|RIO kinase 2
hg19_v2_chr11_+_107461804_107461882	0.049067	HOXD9	ENST00000531234.1|ELMOD1|ENSG00000110675.8|ELMO/CED-12 domain containing 1
hg19_v2_chr7_-_6866401_6866401	0.0487555	HOXD9	ENST00000316731.8|CCZ1B|ENSG00000146574.11|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)
hg19_v2_chr2_+_210444748_210444770	0.0487122	HOXD9	ENST00000392194.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr10_-_105845674_105845760	0.0476267	HOXD9	ENST00000353479.5|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1 	ENST00000369733.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chrX_-_72434628_72434722	0.0474099	HOXD9	ENST00000536638.1|NAP1L2|ENSG00000186462.7|nucleosome assembly protein 1-like 2 	ENST00000373517.3|NAP1L2|ENSG00000186462.7|nucleosome assembly protein 1-like 2
hg19_v2_chr11_-_128457446_128457461	0.0472646	HOXD9	ENST00000392668.4|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1
hg19_v2_chr1_-_244006528_244006588	0.0469682	HOXD9	ENST00000336199.5|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3 	ENST00000263826.5|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr12_+_19358228_19358259	0.0466554	HOXD9	ENST00000424268.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5 	ENST00000543806.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5
hg19_v2_chr3_-_157221380_157221415	0.0461726	HOXD9	ENST00000468233.1|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1
hg19_v2_chr8_+_86089460_86089483	0.0458981	HOXD9	ENST00000418930.2|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding
hg19_v2_chr17_-_71223839_71223887	0.045609	HOXD9	ENST00000579872.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000580032.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chr11_-_8986474_8986558	0.0454685	HOXD9	ENST00000525069.1|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B
hg19_v2_chr2_+_234668894_234668934	0.0445271	HOXD9	ENST00000305208.5|UGT1A8|ENSG00000242366.2|UDP glucuronosyltransferase 1 family, polypeptide A1 	ENST00000608383.1|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8 	ENST00000360418.3|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8
hg19_v2_chr16_+_22518495_22518495	0.0435866	HOXD9	ENST00000541154.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chrX_+_71401570_71401644	0.0432743	HOXD9	ENST00000496835.2|PIN4|ENSG00000102309.8|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) 	ENST00000446576.1|PIN4|ENSG00000102309.8|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
hg19_v2_chr5_-_138775177_138775220	0.0427969	HOXD9	ENST00000302060.5|DNAJC18|ENSG00000170464.5|DnaJ (Hsp40) homolog, subfamily C, member 18
hg19_v2_chr6_+_149539767_149539834	0.0418363	HOXD9	ENST00000606202.1|TAB2|ENSG00000055208.13|TGF-beta activated kinase 1/MAP3K7 binding protein 2 	ENST00000536230.1|TAB2|ENSG00000055208.13|TGF-beta activated kinase 1/MAP3K7 binding protein 2 	ENST00000445901.1|RP1-111D6.3|ENSG00000228408.1|RP1-111D6.3
hg19_v2_chr14_+_92789498_92789537	0.0410358	HOXD9	ENST00000531433.1|SLC24A4|ENSG00000140090.13|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
hg19_v2_chr2_+_109237717_109237729	0.0409022	HOXD9	ENST00000409441.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr1_-_48937838_48937905	0.0406377	HOXD9	ENST00000371847.3|SPATA6|ENSG00000132122.7|spermatogenesis associated 6
hg19_v2_chr3_+_111393501_111393538	0.0399104	HOXD9	ENST00000393934.3|PLCXD2|ENSG00000240891.2|phosphatidylinositol-specific phospholipase C, X domain containing 2
hg19_v2_chr12_-_10607084_10607284	0.0398712	HOXD9	ENST00000408006.3|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1 	ENST00000544822.1|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1 	ENST00000536188.1|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1
hg19_v2_chr1_+_81771806_81771876	0.0383308	HOXD9	ENST00000370721.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370727.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370725.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370723.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370728.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370730.1|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr5_+_112043186_112043225	0.0379887	HOXD9	ENST00000509732.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000457016.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000507379.1|APC|ENSG00000134982.12|adenomatous polyposis coli
hg19_v2_chr6_-_88411911_88411928	0.0377956	HOXD9	ENST00000257787.5|AKIRIN2|ENSG00000135334.8|akirin 2
hg19_v2_chr17_+_75181292_75181298	0.0376767	HOXD9	ENST00000431431.2|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae)
hg19_v2_chr1_-_48937821_48937832	0.0371609	HOXD9	ENST00000396199.3|SPATA6|ENSG00000132122.7|spermatogenesis associated 6
hg19_v2_chr8_-_102181718_102181857	0.0360029	HOXD9	ENST00000565617.1|KB-1460A1.5|ENSG00000261087.1|KB-1460A1.5
hg19_v2_chr4_-_168155577_168155661	0.0357824	HOXD9	ENST00000541354.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000509854.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000512681.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000421836.2|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000510741.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000510403.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr6_+_4087664_4087683	0.0355817	HOXD9	ENST00000430835.2|C6orf201|ENSG00000185689.11|chromosome 6 open reading frame 201
hg19_v2_chr4_+_74576019_74576088	0.0353655	HOXD9	ENST00000436089.1|AC112518.3|ENSG00000228277.1|AC112518.3
hg19_v2_chr15_-_75748115_75748126	0.0350807	HOXD9	ENST00000360439.4|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A
hg19_v2_chr14_-_68000442_68000456	0.0339724	HOXD9	ENST00000554278.1|TMEM229B|ENSG00000198133.4|transmembrane protein 229B
hg19_v2_chr12_-_95009837_95009854	0.0336447	HOXD9	ENST00000551457.1|TMCC3|ENSG00000057704.6|transmembrane and coiled-coil domain family 3
hg19_v2_chr20_-_39928756_39928766	0.033261	HOXD9	ENST00000432768.2|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3
hg19_v2_chr1_+_67632083_67632169	0.0326115	HOXD9	ENST00000347310.5|IL23R|ENSG00000162594.10|interleukin 23 receptor 	ENST00000371002.1|IL23R|ENSG00000162594.10|interleukin 23 receptor
hg19_v2_chrX_+_135388147_135388181	0.0306921	HOXD9	ENST00000394141.1|GPR112|ENSG00000156920.6|G protein-coupled receptor 112
hg19_v2_chr10_-_94301107_94301111	0.0298994	HOXD9	ENST00000436178.1|IDE|ENSG00000119912.11|insulin-degrading enzyme
hg19_v2_chr1_+_160370344_160370406	0.0294526	HOXD9	ENST00000368061.2|VANGL2|ENSG00000162738.5|VANGL planar cell polarity protein 2
hg19_v2_chr2_+_161993412_161993453	0.0288312	HOXD9	ENST00000259075.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000432002.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr9_+_20927764_20927855	0.0284424	HOXD9	ENST00000603044.1|FOCAD|ENSG00000188352.8|focadhesin 	ENST00000604254.1|FOCAD|ENSG00000188352.8|focadhesin
hg19_v2_chr12_-_30887948_30887997	0.028316	HOXD9	ENST00000433722.2|CAPRIN2|ENSG00000110888.13|caprin family member 2
hg19_v2_chr3_+_62936098_62936146	0.0283063	HOXD9	ENST00000475886.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000465684.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000465262.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000468072.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698
hg19_v2_chr15_-_54025300_54025380	0.0277326	HOXD9	ENST00000559418.1|WDR72|ENSG00000166415.10|WD repeat domain 72
hg19_v2_chrX_+_12993336_12993363	0.0268663	HOXD9	ENST00000380635.1|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked
hg19_v2_chrX_-_10645724_10645735	0.0268294	HOXD9	ENST00000413894.1|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome)
hg19_v2_chr15_+_48483736_48483962	0.0263199	HOXD9	ENST00000417307.2|CTXN2|ENSG00000233932.3|cortexin 2 	ENST00000559641.1|SLC12A1|ENSG00000074803.13|solute carrier family 12 (sodium/potassium/chloride transporter), member 1
hg19_v2_chr18_+_616711_616720	0.026159	HOXD9	ENST00000579494.1|CLUL1|ENSG00000079101.12|clusterin-like 1 (retinal)
hg19_v2_chr5_+_137722255_137722269	0.0253692	HOXD9	ENST00000542866.1|KDM3B|ENSG00000120733.9|lysine (K)-specific demethylase 3B
hg19_v2_chr9_-_28670283_28670283	0.025095	HOXD9	ENST00000379992.2|LINGO2|ENSG00000174482.6|leucine rich repeat and Ig domain containing 2
hg19_v2_chr3_+_182511266_182511308	0.0247864	HOXD9	ENST00000323116.5|ATP11B|ENSG00000058063.11|ATPase, class VI, type 11B 	ENST00000493826.1|ATP11B|ENSG00000058063.11|ATPase, class VI, type 11B
hg19_v2_chr1_+_197881592_197881635	0.0238785	HOXD9	ENST00000367391.1|LHX9|ENSG00000143355.11|LIM homeobox 9 	ENST00000367390.3|LHX9|ENSG00000143355.11|LIM homeobox 9
hg19_v2_chr9_+_124103625_124103625	0.0233238	HOXD9	ENST00000594963.1|AL161784.1|ENSG00000267987.1|Uncharacterized protein
hg19_v2_chr4_-_69817481_69817528	0.0232062	HOXD9	ENST00000251566.4|UGT2A3|ENSG00000135220.6|UDP glucuronosyltransferase 2 family, polypeptide A3
hg19_v2_chr15_+_52155001_52155035	0.0231625	HOXD9	ENST00000544199.1|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous)
hg19_v2_chr5_-_177207634_177207677	0.0224325	HOXD9	ENST00000513554.1|FAM153A|ENSG00000170074.15|family with sequence similarity 153, member A 	ENST00000440605.3|FAM153A|ENSG00000170074.15|family with sequence similarity 153, member A
hg19_v2_chr9_+_96846740_96846767	0.0223203	HOXD9	ENST00000288976.3|PTPDC1|ENSG00000158079.10|protein tyrosine phosphatase domain containing 1
hg19_v2_chr3_+_102153859_102153877	0.0217313	HOXD9	ENST00000306176.1|ZPLD1|ENSG00000170044.4|zona pellucida-like domain containing 1 	ENST00000466937.1|ZPLD1|ENSG00000170044.4|zona pellucida-like domain containing 1
hg19_v2_chr10_-_99030395_99030434	0.0213524	HOXD9	ENST00000355366.5|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000371027.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr8_-_10512569_10512612	0.0208799	HOXD9	ENST00000382483.3|RP1L1|ENSG00000183638.5|retinitis pigmentosa 1-like 1
hg19_v2_chr18_-_24443151_24443163	0.0205044	HOXD9	ENST00000440832.3|AQP4|ENSG00000171885.9|aquaporin 4
hg19_v2_chr12_-_15815626_15815681	0.020447	HOXD9	ENST00000540613.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8
hg19_v2_chr15_+_57998923_57998934	0.0201763	HOXD9	ENST00000380557.4|POLR2M|ENSG00000255529.3|polymerase (RNA) II (DNA directed) polypeptide M
hg19_v2_chr22_-_32651326_32651340	0.0196073	HOXD9	ENST00000266086.4|SLC5A4|ENSG00000100191.4|solute carrier family 5 (glucose activated ion channel), member 4
hg19_v2_chr7_+_93535817_93535822	0.0194678	HOXD9	ENST00000248572.5|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v2_chr12_+_96196875_96196875	0.0194445	HOXD9	ENST00000553095.1|RP11-536G4.1|ENSG00000258292.1|Uncharacterized protein
hg19_v2_chrX_+_36053908_36053908	0.019381	HOXD9	ENST00000378660.2|CHDC2|ENSG00000176034.8|calponin homology domain containing 2
hg19_v2_chr1_-_146082633_146082765	0.0193631	HOXD9	ENST00000605317.1|NBPF11|ENSG00000152042.13|neuroblastoma breakpoint family, member 11 	ENST00000604938.1|NBPF11|ENSG00000152042.13|neuroblastoma breakpoint family, member 11 	ENST00000339388.5|NBPF11|ENSG00000152042.13|neuroblastoma breakpoint family, member 11
hg19_v2_chr7_+_77469439_77469497	0.0192702	HOXD9	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr16_-_66764119_66764138	0.0188424	HOXD9	ENST00000569320.1|DYNC1LI2|ENSG00000135720.8|dynein, cytoplasmic 1, light intermediate chain 2
hg19_v2_chr17_-_29645836_29645853	0.0188033	HOXD9	ENST00000578584.1|CTD-2370N5.3|ENSG00000265118.1|CTD-2370N5.3
hg19_v2_chr13_+_46039037_46039126	0.0178617	HOXD9	ENST00000349995.5|COG3|ENSG00000136152.10|component of oligomeric golgi complex 3
hg19_v2_chr1_+_38022513_38022571	0.0177955	HOXD9	ENST00000296218.7|DNALI1|ENSG00000163879.9|dynein, axonemal, light intermediate chain 1
hg19_v2_chr4_-_144940477_144940541	0.0177843	HOXD9	ENST00000513128.1|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000429670.2|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000502664.1|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group)
hg19_v2_chr7_-_107204706_107204797	0.0177649	HOXD9	ENST00000393603.2|COG5|ENSG00000164597.9|component of oligomeric golgi complex 5
hg19_v2_chr2_+_33661382_33661445	0.0176292	HOXD9	ENST00000402538.3|RASGRP3|ENSG00000152689.13|RAS guanyl releasing protein 3 (calcium and DAG-regulated)
hg19_v2_chr3_-_157221128_157221216	0.0175358	HOXD9	ENST00000392833.2|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1 	ENST00000362010.2|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1
hg19_v2_chr7_+_93535866_93535906	0.0174748	HOXD9	ENST00000429473.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 	ENST00000430875.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 	ENST00000428834.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v2_chr8_+_86089619_86089653	0.017182	HOXD9	ENST00000256117.5|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding 	ENST00000416274.2|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding
hg19_v2_chr2_-_170430277_170430361	0.0169262	HOXD9	ENST00000438035.1|FASTKD1|ENSG00000138399.13|FAST kinase domains 1 	ENST00000453929.2|FASTKD1|ENSG00000138399.13|FAST kinase domains 1
hg19_v2_chr1_+_82165350_82165455	0.0167996	HOXD9	ENST00000359929.3|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr4_-_70361579_70361600	0.0161367	HOXD9	ENST00000512583.1|UGT2B4|ENSG00000156096.8|UDP glucuronosyltransferase 2 family, polypeptide B4
hg19_v2_chr14_-_36645674_36645739	0.015706	HOXD9	ENST00000556013.2|PTCSC3|ENSG00000259104.2|papillary thyroid carcinoma susceptibility candidate 3 (non-protein coding)
hg19_v2_chr6_+_15401075_15401095	0.0154188	HOXD9	ENST00000541660.1|JARID2|ENSG00000008083.9|jumonji, AT rich interactive domain 2
hg19_v2_chr7_-_5998714_5998714	0.0153618	HOXD9	ENST00000539903.1|RSPH10B|ENSG00000155026.12|radial spoke head 10 homolog B (Chlamydomonas)
hg19_v2_chr15_+_66797627_66797684	0.0151594	HOXD9	ENST00000565627.1|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein 	ENST00000564179.1|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein
hg19_v2_chr14_+_23654525_23654545	0.0142615	HOXD9	ENST00000399910.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164 	ENST00000492621.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164
hg19_v2_chr8_+_104892639_104892652	0.0142609	HOXD9	ENST00000436393.2|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2
hg19_v2_chr10_-_105845536_105845581	0.014182	HOXD9	ENST00000393211.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chr1_+_15668240_15668263	0.0140598	HOXD9	ENST00000444385.1|FHAD1|ENSG00000142621.15|forkhead-associated (FHA) phosphopeptide binding domain 1
hg19_v2_chr16_-_18911366_18911366	0.0140107	HOXD9	ENST00000565224.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr2_+_161993465_161993481	0.0139102	HOXD9	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr2_-_191115229_191115258	0.0138685	HOXD9	ENST00000409820.2|HIBCH|ENSG00000198130.10|3-hydroxyisobutyryl-CoA hydrolase 	ENST00000410045.1|HIBCH|ENSG00000198130.10|3-hydroxyisobutyryl-CoA hydrolase
hg19_v2_chrX_-_33229636_33229651	0.0136766	HOXD9	ENST00000357033.4|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr12_-_110486348_110486370	0.0136672	HOXD9	ENST00000547573.1|C12orf76|ENSG00000174456.9|chromosome 12 open reading frame 76 	ENST00000546651.2|C12orf76|ENSG00000174456.9|chromosome 12 open reading frame 76 	ENST00000551185.2|C12orf76|ENSG00000174456.9|chromosome 12 open reading frame 76
hg19_v2_chrX_+_120181457_120181474	0.0135101	HOXD9	ENST00000328078.1|GLUD2|ENSG00000182890.3|glutamate dehydrogenase 2
hg19_v2_chr3_+_145782358_145782358	0.0132558	HOXD9	ENST00000422482.1|AC107021.1|ENSG00000232013.1|HCG1786590; PRO2533; Uncharacterized protein
hg19_v2_chr6_-_49681235_49681274	0.0130787	HOXD9	ENST00000339139.4|CRISP2|ENSG00000124490.9|cysteine-rich secretory protein 2
hg19_v2_chr19_-_53466095_53466164	0.0129542	HOXD9	ENST00000391786.2|ZNF816|ENSG00000180257.8|zinc finger protein 816 	ENST00000434371.2|ZNF816|ENSG00000180257.8|zinc finger protein 816 	ENST00000357666.4|ZNF816|ENSG00000180257.8|zinc finger protein 816 	ENST00000438970.2|ZNF816|ENSG00000180257.8|zinc finger protein 816 	ENST00000270457.4|ZNF816|ENSG00000180257.8|zinc finger protein 816 	ENST00000535506.1|ZNF816|ENSG00000180257.8|zinc finger protein 816 	ENST00000444460.2|ZNF816|ENSG00000180257.8|zinc finger protein 816 	ENST00000457013.2|ZNF816|ENSG00000180257.8|zinc finger protein 816
hg19_v2_chr17_-_29641084_29641103	0.0128773	HOXD9	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chrX_-_130423200_130423228	0.0126439	HOXD9	ENST00000361420.3|IGSF1|ENSG00000147255.13|immunoglobulin superfamily, member 1
hg19_v2_chr8_-_66701319_66701330	0.0125429	HOXD9	ENST00000379419.4|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr20_+_19870167_19870225	0.0120061	HOXD9	ENST00000440354.2|RIN2|ENSG00000132669.8|Ras and Rab interactor 2
hg19_v2_chr17_+_44679808_44679808	0.011797	HOXD9	ENST00000571172.1|NSF|ENSG00000073969.14|N-ethylmaleimide-sensitive factor
hg19_v2_chr6_+_46761118_46761132	0.0116088	HOXD9	ENST00000230588.4|MEP1A|ENSG00000112818.5|meprin A, alpha (PABA peptide hydrolase)
hg19_v2_chr6_-_52774464_52774499	0.0114473	HOXD9	ENST00000370968.1|GSTA3|ENSG00000174156.9|glutathione S-transferase alpha 3 	ENST00000211122.3|GSTA3|ENSG00000174156.9|glutathione S-transferase alpha 3
hg19_v2_chr14_-_24733444_24733470	0.0113732	HOXD9	ENST00000560478.1|TGM1|ENSG00000092295.7|transglutaminase 1 	ENST00000560443.1|TGM1|ENSG00000092295.7|transglutaminase 1
hg19_v2_chr5_+_158654712_158654727	0.0109261	HOXD9	ENST00000520323.1|CTB-11I22.2|ENSG00000253315.1|CTB-11I22.2
hg19_v2_chr2_-_170430366_170430390	0.010523	HOXD9	ENST00000453153.2|FASTKD1|ENSG00000138399.13|FAST kinase domains 1 	ENST00000445210.1|FASTKD1|ENSG00000138399.13|FAST kinase domains 1
hg19_v2_chr3_+_186435065_186435126	0.0105085	HOXD9	ENST00000287611.2|KNG1|ENSG00000113889.7|kininogen 1 	ENST00000265023.4|KNG1|ENSG00000113889.7|kininogen 1
hg19_v2_chr16_+_21689835_21689835	0.0100021	HOXD9	ENST00000286149.4|OTOA|ENSG00000155719.12|otoancorin 	ENST00000388958.3|OTOA|ENSG00000155719.12|otoancorin
hg19_v2_chr4_-_70361615_70361631	0.0092563	HOXD9	ENST00000305107.6|UGT2B4|ENSG00000156096.8|UDP glucuronosyltransferase 2 family, polypeptide B4
hg19_v2_chr7_+_18536090_18536130	0.00914692	HOXD9	ENST00000441986.1|HDAC9|ENSG00000048052.17|histone deacetylase 9
hg19_v2_chr7_-_91794590_91794590	0.00902217	HOXD9	ENST00000430130.2|LRRD1|ENSG00000240720.3|leucine-rich repeats and death domain containing 1 	ENST00000454089.2|LRRD1|ENSG00000240720.3|leucine-rich repeats and death domain containing 1
hg19_v2_chr2_-_128284020_128284091	0.00810179	HOXD9	ENST00000295321.4|IWS1|ENSG00000163166.9|IWS1 homolog (S. cerevisiae) 	ENST00000455721.2|IWS1|ENSG00000163166.9|IWS1 homolog (S. cerevisiae)
hg19_v2_chr11_-_78052923_78052949	0.00787574	HOXD9	ENST00000340149.2|GAB2|ENSG00000033327.8|GRB2-associated binding protein 2
hg19_v2_chr4_+_69962185_69962202	0.00696089	HOXD9	ENST00000305231.7|UGT2B7|ENSG00000171234.9|UDP glucuronosyltransferase 2 family, polypeptide B7
hg19_v2_chr6_-_10115007_10115007	0.0066465	HOXD9	ENST00000485268.1|OFCC1|ENSG00000181355.16|orofacial cleft 1 candidate 1
hg19_v2_chr2_+_210517895_210518021	0.00619119	HOXD9	ENST00000447185.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr2_+_109223595_109223617	0.00595658	HOXD9	ENST00000410093.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chrX_+_123097014_123097033	0.00573811	HOXD9	ENST00000394478.1|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chr11_+_92085262_92085262	0.00490891	HOXD9	ENST00000298047.6|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000409404.2|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000541502.1|FAT3|ENSG00000165323.11|FAT atypical cadherin 3
hg19_v2_chrX_-_15332665_15332693	0.00396984	HOXD9	ENST00000537676.1|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11 	ENST00000344384.4|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11
hg19_v2_chr18_-_53069419_53069471	0.00363146	HOXD9	ENST00000570177.2|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr6_+_53948328_53948338	0.00333522	HOXD9	ENST00000370876.2|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein
hg19_v2_chr2_-_166060382_166060411	0.002895	HOXD9	ENST00000409101.3|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr12_-_122879969_122879982	0.00249146	HOXD9	ENST00000540304.1|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1
hg19_v2_chr11_+_63606373_63606418	0.00245576	HOXD9	ENST00000402010.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000315032.8|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377809.4|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000413835.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377810.3|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2
hg19_v2_chr14_+_81421355_81421387	0.00220277	HOXD9	ENST00000541158.2|TSHR|ENSG00000165409.11|thyroid stimulating hormone receptor
hg19_v2_chr2_+_145425573_145425654	0.0021443	HOXD9	ENST00000600064.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000597670.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000414256.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000599187.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000451774.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000599072.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000596589.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000597893.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding)
hg19_v2_chr4_-_100065419_100065434	0.0019862	HOXD9	ENST00000504125.1|ADH4|ENSG00000198099.4|alcohol dehydrogenase 4 (class II), pi polypeptide 	ENST00000505590.1|ADH4|ENSG00000198099.4|alcohol dehydrogenase 4 (class II), pi polypeptide
hg19_v2_chr2_+_234627424_234627444	0.00179716	HOXD9	ENST00000373409.3|UGT1A4|ENSG00000244474.1|UDP glucuronosyltransferase 1 family, polypeptide A4
hg19_v2_chr3_+_155860751_155860786	0.00162872	HOXD9	ENST00000471742.1|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v2_chr12_-_11002063_11002081	0.000980428	HOXD9	ENST00000544994.1|PRR4|ENSG00000111215.7|proline rich 4 (lacrimal) 	ENST00000228811.4|PRR4|ENSG00000111215.7|proline rich 4 (lacrimal) 	ENST00000540107.1|PRR4|ENSG00000111215.7|proline rich 4 (lacrimal)
hg19_v2_chr18_-_70532906_70532934	0.000903328	HOXD9	ENST00000299430.2|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1 	ENST00000397929.1|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v2_chr15_-_55562582_55562617	0.000809558	HOXD9	ENST00000396307.2|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr8_+_107738343_107738413	6.57331e-05	HOXD9	ENST00000521592.1|OXR1|ENSG00000164830.13|oxidation resistance 1
