hg19_v2_chr11_+_65266507_65266522	1.21541	HOXC9	ENST00000544868.1|MALAT1|ENSG00000251562.3|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
hg19_v2_chr6_-_52859046_52859201	1.1886	HOXC9	ENST00000457564.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4 	ENST00000541324.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4 	ENST00000370960.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4
hg19_v2_chr3_+_149191723_149191761	0.906252	HOXC9	ENST00000305354.4|TM4SF4|ENSG00000169903.6|transmembrane 4 L six family member 4
hg19_v2_chr2_+_38177575_38177612	0.820603	HOXC9	ENST00000407257.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000417700.2|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000234195.3|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000442857.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2
hg19_v2_chr16_-_66907139_66907169	0.79563	HOXC9	ENST00000561579.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1
hg19_v2_chr4_+_155484103_155484147	0.669035	HOXC9	ENST00000302068.4|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr4_+_155484155_155484178	0.653321	HOXC9	ENST00000509493.1|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr15_+_52155001_52155035	0.645774	HOXC9	ENST00000544199.1|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous)
hg19_v2_chr1_-_197115818_197115829	0.633776	HOXC9	ENST00000367409.4|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 	ENST00000294732.7|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
hg19_v2_chr1_+_241695424_241695440	0.623827	HOXC9	ENST00000366558.3|KMO|ENSG00000117009.7|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) 	ENST00000366559.4|KMO|ENSG00000117009.7|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
hg19_v2_chr6_-_109702885_109702908	0.601023	HOXC9	ENST00000504373.1|CD164|ENSG00000135535.10|CD164 molecule, sialomucin
hg19_v2_chr2_+_160590469_160590485	0.554974	HOXC9	ENST00000409591.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
hg19_v2_chr8_-_42396185_42396197	0.54702	HOXC9	ENST00000518717.1|SLC20A2|ENSG00000168575.5|solute carrier family 20 (phosphate transporter), member 2
hg19_v2_chrX_+_43515467_43515562	0.540028	HOXC9	ENST00000338702.3|MAOA|ENSG00000189221.5|monoamine oxidase A 	ENST00000542639.1|MAOA|ENSG00000189221.5|monoamine oxidase A
hg19_v2_chr11_-_14521349_14521365	0.495566	HOXC9	ENST00000534234.1|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1
hg19_v2_chr9_-_98189055_98189078	0.460444	HOXC9	ENST00000433644.2|RP11-435O5.2|ENSG00000237857.2|RP11-435O5.2
hg19_v2_chr8_+_104033296_104033360	0.456073	HOXC9	ENST00000521514.1|ATP6V1C1|ENSG00000155097.7|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 	ENST00000518738.1|ATP6V1C1|ENSG00000155097.7|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
hg19_v2_chr17_+_68071389_68071426	0.429881	HOXC9	ENST00000283936.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392671.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr7_+_106810165_106810374	0.412599	HOXC9	ENST00000468401.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000497535.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000485846.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr20_-_48782639_48782743	0.40157	HOXC9	ENST00000435301.2|RP11-112L6.3|ENSG00000237595.2|RP11-112L6.3
hg19_v2_chr14_-_92247032_92247051	0.400773	HOXC9	ENST00000556661.1|CATSPERB|ENSG00000133962.3|catsper channel auxiliary subunit beta 	ENST00000553676.1|CATSPERB|ENSG00000133962.3|catsper channel auxiliary subunit beta 	ENST00000554560.1|CATSPERB|ENSG00000133962.3|catsper channel auxiliary subunit beta
hg19_v2_chr12_-_15374343_15374416	0.389335	HOXC9	ENST00000256953.2|RERG|ENSG00000134533.2|RAS-like, estrogen-regulated, growth inhibitor 	ENST00000546331.1|RERG|ENSG00000134533.2|RAS-like, estrogen-regulated, growth inhibitor
hg19_v2_chr21_-_39705323_39705343	0.383883	HOXC9	ENST00000436845.1|AP001422.3|ENSG00000231231.1|AP001422.3
hg19_v2_chr10_-_13344341_13344412	0.375432	HOXC9	ENST00000396920.3|PHYH|ENSG00000107537.9|phytanoyl-CoA 2-hydroxylase
hg19_v2_chr2_+_161993465_161993481	0.362971	HOXC9	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr14_+_53173890_53173907	0.357694	HOXC9	ENST00000445930.2|PSMC6|ENSG00000100519.7|proteasome (prosome, macropain) 26S subunit, ATPase, 6
hg19_v2_chr2_+_27760247_27760261	0.353284	HOXC9	ENST00000447166.1|AC109829.1|ENSG00000233438.1|Uncharacterized protein
hg19_v2_chr6_+_76599809_76599927	0.349184	HOXC9	ENST00000430435.1|MYO6|ENSG00000196586.9|myosin VI
hg19_v2_chr22_+_22676808_22676828	0.34834	HOXC9	ENST00000390290.2|IGLV1-51|ENSG00000211644.2|immunoglobulin lambda variable 1-51
hg19_v2_chr17_-_28257080_28257294	0.34467	HOXC9	ENST00000579954.1|SSH2|ENSG00000141298.13|slingshot protein phosphatase 2 	ENST00000540801.1|SSH2|ENSG00000141298.13|slingshot protein phosphatase 2 	ENST00000269033.3|SSH2|ENSG00000141298.13|slingshot protein phosphatase 2 	ENST00000590153.1|SSH2|ENSG00000141298.13|slingshot protein phosphatase 2 	ENST00000582084.1|SSH2|ENSG00000141298.13|slingshot protein phosphatase 2
hg19_v2_chr12_+_123237321_123237407	0.342733	HOXC9	ENST00000280557.6|DENR|ENSG00000139726.6|density-regulated protein 	ENST00000455982.2|DENR|ENSG00000139726.6|density-regulated protein
hg19_v2_chr14_+_97925151_97925207	0.32852	HOXC9	ENST00000554862.1|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1	ENST00000554260.1|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1	ENST00000499910.2|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1
hg19_v2_chr7_+_7196565_7196714	0.325459	HOXC9	ENST00000429911.1|C1GALT1|ENSG00000106392.6|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
hg19_v2_chr12_-_27167233_27167367	0.323526	HOXC9	ENST00000535819.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000543803.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000535423.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000539741.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000343028.4|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000545600.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000543088.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3
hg19_v2_chr20_-_35329063_35329078	0.321866	HOXC9	ENST00000422536.1|NDRG3|ENSG00000101079.16|NDRG family member 3
hg19_v2_chr7_-_156685841_156685884	0.32003	HOXC9	ENST00000354505.4|LMBR1|ENSG00000105983.15|limb development membrane protein 1 	ENST00000540390.1|LMBR1|ENSG00000105983.15|limb development membrane protein 1
hg19_v2_chr12_-_90049878_90049890	0.313334	HOXC9	ENST00000359142.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr2_+_109271481_109271509	0.311281	HOXC9	ENST00000542845.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1 	ENST00000393314.2|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr1_+_63989004_63989077	0.309063	HOXC9	ENST00000371088.4|EFCAB7|ENSG00000203965.8|EF-hand calcium binding domain 7
hg19_v2_chr3_+_112709804_112709850	0.30818	HOXC9	ENST00000383677.3|GTPBP8|ENSG00000163607.10|GTP-binding protein 8 (putative)
hg19_v2_chr2_-_17981462_17981584	0.308102	HOXC9	ENST00000402989.1|SMC6|ENSG00000163029.11|structural maintenance of chromosomes 6 	ENST00000428868.1|SMC6|ENSG00000163029.11|structural maintenance of chromosomes 6
hg19_v2_chr8_-_17555164_17555204	0.307545	HOXC9	ENST00000297488.6|MTUS1|ENSG00000129422.9|microtubule associated tumor suppressor 1
hg19_v2_chr1_+_220863187_220863187	0.292263	HOXC9	ENST00000294889.5|C1orf115|ENSG00000162817.6|chromosome 1 open reading frame 115
hg19_v2_chr2_+_207630081_207630347	0.292205	HOXC9	ENST00000236980.6|FASTKD2|ENSG00000118246.9|FAST kinase domains 2 	ENST00000418289.1|FASTKD2|ENSG00000118246.9|FAST kinase domains 2 	ENST00000402774.3|FASTKD2|ENSG00000118246.9|FAST kinase domains 2 	ENST00000403094.3|FASTKD2|ENSG00000118246.9|FAST kinase domains 2
hg19_v2_chr12_+_25348186_25348222	0.288101	HOXC9	ENST00000555711.1|LYRM5|ENSG00000205707.6|LYR motif containing 5 	ENST00000556885.1|LYRM5|ENSG00000205707.6|LYR motif containing 5 	ENST00000554266.1|LYRM5|ENSG00000205707.6|LYR motif containing 5 	ENST00000556351.1|LYRM5|ENSG00000205707.6|LYR motif containing 5 	ENST00000556927.1|LYRM5|ENSG00000205707.6|LYR motif containing 5 	ENST00000556402.1|LYRM5|ENSG00000205707.6|LYR motif containing 5 	ENST00000553788.1|LYRM5|ENSG00000205707.6|LYR motif containing 5
hg19_v2_chr2_+_158114051_158114110	0.286725	HOXC9	ENST00000259056.4|GALNT5|ENSG00000136542.4|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
hg19_v2_chr9_-_95055956_95056004	0.284452	HOXC9	ENST00000375629.3|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase 	ENST00000447699.2|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase 	ENST00000375643.3|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase 	ENST00000395554.3|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase
hg19_v2_chr17_+_55162453_55162594	0.284144	HOXC9	ENST00000575322.1|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1 	ENST00000337714.3|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1 	ENST00000314126.3|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1
hg19_v2_chr4_+_71600063_71600134	0.282058	HOXC9	ENST00000513597.1|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr15_+_59910132_59910144	0.280922	HOXC9	ENST00000559200.1|GCNT3|ENSG00000140297.8|glucosaminyl (N-acetyl) transferase 3, mucin type
hg19_v2_chr18_+_32558208_32558340	0.279302	HOXC9	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr8_-_17579726_17579759	0.27838	HOXC9	ENST00000381861.3|MTUS1|ENSG00000129422.9|microtubule associated tumor suppressor 1
hg19_v2_chr14_+_96039882_96039942	0.277937	HOXC9	ENST00000556346.1|RP11-1070N10.4|ENSG00000258390.1|RP11-1070N10.4	ENST00000553785.1|RP11-1070N10.4|ENSG00000258390.1|RP11-1070N10.4
hg19_v2_chr10_+_76871353_76871394	0.27679	HOXC9	ENST00000542569.1|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr7_+_64838712_64838778	0.27523	HOXC9	ENST00000328747.7|ZNF92|ENSG00000146757.9|zinc finger protein 92 	ENST00000431504.1|ZNF92|ENSG00000146757.9|zinc finger protein 92 	ENST00000357512.2|ZNF92|ENSG00000146757.9|zinc finger protein 92
hg19_v2_chr12_-_90049828_90049847	0.272961	HOXC9	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr10_-_123687497_123687562	0.270017	HOXC9	ENST00000369040.3|ATE1|ENSG00000107669.13|arginyltransferase 1 	ENST00000224652.6|ATE1|ENSG00000107669.13|arginyltransferase 1 	ENST00000369043.3|ATE1|ENSG00000107669.13|arginyltransferase 1
hg19_v2_chr13_-_30424821_30424847	0.263577	HOXC9	ENST00000380680.4|UBL3|ENSG00000122042.9|ubiquitin-like 3
hg19_v2_chr18_+_32558380_32558399	0.262697	HOXC9	ENST00000588349.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr8_+_104033277_104033292	0.260213	HOXC9	ENST00000518857.1|ATP6V1C1|ENSG00000155097.7|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 	ENST00000395862.3|ATP6V1C1|ENSG00000155097.7|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
hg19_v2_chr15_+_69854027_69854062	0.259249	HOXC9	ENST00000498938.2|RP11-279F6.1|ENSG00000245750.3|RP11-279F6.1
hg19_v2_chr20_+_5987890_5987904	0.256809	HOXC9	ENST00000378868.4|CRLS1|ENSG00000088766.7|cardiolipin synthase 1
hg19_v2_chr16_+_53412368_53412387	0.256012	HOXC9	ENST00000565189.1|RP11-44F14.2|ENSG00000261804.1|RP11-44F14.2
hg19_v2_chr4_-_70626430_70626434	0.255567	HOXC9	ENST00000310613.3|SULT1B1|ENSG00000173597.4|sulfotransferase family, cytosolic, 1B, member 1
hg19_v2_chr19_-_36304201_36304201	0.252937	HOXC9	ENST00000301175.3|PRODH2|ENSG00000250799.5|proline dehydrogenase (oxidase) 2
hg19_v2_chr5_-_42811986_42812001	0.251351	HOXC9	ENST00000511224.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1 	ENST00000507920.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1 	ENST00000510965.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1
hg19_v2_chr3_+_87276407_87276493	0.24957	HOXC9	ENST00000471660.1|CHMP2B|ENSG00000083937.4|charged multivesicular body protein 2B 	ENST00000263780.4|CHMP2B|ENSG00000083937.4|charged multivesicular body protein 2B 	ENST00000494980.1|CHMP2B|ENSG00000083937.4|charged multivesicular body protein 2B
hg19_v2_chr1_+_35734562_35734573	0.24611	HOXC9	ENST00000314607.6|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4 	ENST00000373297.2|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4
hg19_v2_chr18_+_3466248_3466312	0.245062	HOXC9	ENST00000581029.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4	ENST00000581442.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4	ENST00000579007.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4
hg19_v2_chr9_-_95056010_95056038	0.24339	HOXC9	ENST00000443024.2|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase
hg19_v2_chr11_+_125496619_125496646	0.238227	HOXC9	ENST00000532669.1|CHEK1|ENSG00000149554.8|checkpoint kinase 1 	ENST00000278916.3|CHEK1|ENSG00000149554.8|checkpoint kinase 1
hg19_v2_chr20_-_45980621_45980649	0.234459	HOXC9	ENST00000446894.1|ZMYND8|ENSG00000101040.15|zinc finger, MYND-type containing 8
hg19_v2_chr4_-_100065440_100065463	0.234181	HOXC9	ENST00000508393.1|ADH4|ENSG00000198099.4|alcohol dehydrogenase 4 (class II), pi polypeptide 	ENST00000265512.7|ADH4|ENSG00000198099.4|alcohol dehydrogenase 4 (class II), pi polypeptide
hg19_v2_chr6_-_52859968_52860149	0.232942	HOXC9	ENST00000370959.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4
hg19_v2_chr17_-_55162360_55162385	0.230328	HOXC9	ENST00000576871.1|RP11-166P13.3|ENSG00000263004.1|RP11-166P13.3	ENST00000576313.1|RP11-166P13.3|ENSG00000263004.1|RP11-166P13.3
hg19_v2_chr19_+_21106081_21106207	0.228764	HOXC9	ENST00000300540.3|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000595854.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000601284.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000328178.8|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000599885.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000596476.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000345030.6|ZNF85|ENSG00000105750.10|zinc finger protein 85
hg19_v2_chr5_-_159846066_159846095	0.228326	HOXC9	ENST00000519349.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae) 	ENST00000520664.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr12_-_15815626_15815681	0.228274	HOXC9	ENST00000540613.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8
hg19_v2_chr14_+_55494323_55494345	0.228118	HOXC9	ENST00000339298.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr14_+_60712463_60712475	0.227072	HOXC9	ENST00000325642.3|PPM1A|ENSG00000100614.13|protein phosphatase, Mg2+/Mn2+ dependent, 1A 	ENST00000529574.1|PPM1A|ENSG00000100614.13|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v2_chr2_+_161993412_161993453	0.226302	HOXC9	ENST00000259075.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000432002.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr2_+_86669118_86669241	0.226207	HOXC9	ENST00000427678.1|KDM3A|ENSG00000115548.12|lysine (K)-specific demethylase 3A 	ENST00000542128.1|KDM3A|ENSG00000115548.12|lysine (K)-specific demethylase 3A
hg19_v2_chr18_-_32870148_32870223	0.2262	HOXC9	ENST00000589178.1|ZSCAN30|ENSG00000186814.8|zinc finger and SCAN domain containing 30 	ENST00000586922.2|RP11-158H5.7|ENSG00000268573.1|RP11-158H5.7	ENST00000333206.5|ZSCAN30|ENSG00000186814.8|zinc finger and SCAN domain containing 30 	ENST00000592278.1|ZSCAN30|ENSG00000186814.8|zinc finger and SCAN domain containing 30 	ENST00000592211.1|ZSCAN30|ENSG00000186814.8|zinc finger and SCAN domain containing 30 	ENST00000420878.3|ZSCAN30|ENSG00000186814.8|zinc finger and SCAN domain containing 30 	ENST00000383091.2|ZSCAN30|ENSG00000186814.8|zinc finger and SCAN domain containing 30
hg19_v2_chr12_-_110906027_110906089	0.223679	HOXC9	ENST00000537466.2|GPN3|ENSG00000111231.4|GPN-loop GTPase 3 	ENST00000550974.1|GPN3|ENSG00000111231.4|GPN-loop GTPase 3 	ENST00000228827.3|GPN3|ENSG00000111231.4|GPN-loop GTPase 3
hg19_v2_chr22_+_45714361_45714374	0.22351	HOXC9	ENST00000452238.1|FAM118A|ENSG00000100376.7|family with sequence similarity 118, member A
hg19_v2_chr1_-_26231589_26231635	0.222805	HOXC9	ENST00000374291.1|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr7_+_130126165_130126202	0.21755	HOXC9	ENST00000427521.1|MEST|ENSG00000106484.10|mesoderm specific transcript 	ENST00000416162.2|MEST|ENSG00000106484.10|mesoderm specific transcript 	ENST00000378576.4|MEST|ENSG00000106484.10|mesoderm specific transcript
hg19_v2_chr7_+_5468362_5468388	0.217276	HOXC9	ENST00000608012.1|RP11-1275H24.3|ENSG00000273084.1|RP11-1275H24.3
hg19_v2_chr18_-_46895066_46895083	0.213421	HOXC9	ENST00000583225.1|DYM|ENSG00000141627.9|dymeclin 	ENST00000584983.1|DYM|ENSG00000141627.9|dymeclin 	ENST00000583280.1|DYM|ENSG00000141627.9|dymeclin 	ENST00000581738.1|DYM|ENSG00000141627.9|dymeclin
hg19_v2_chr5_-_145562147_145562240	0.211172	HOXC9	ENST00000545646.1|LARS|ENSG00000133706.13|leucyl-tRNA synthetase 	ENST00000274562.9|LARS|ENSG00000133706.13|leucyl-tRNA synthetase 	ENST00000510191.1|LARS|ENSG00000133706.13|leucyl-tRNA synthetase 	ENST00000394434.2|LARS|ENSG00000133706.13|leucyl-tRNA synthetase
hg19_v2_chr14_+_53173910_53173940	0.21084	HOXC9	ENST00000606149.1|PSMC6|ENSG00000100519.7|proteasome (prosome, macropain) 26S subunit, ATPase, 6 	ENST00000555339.1|PSMC6|ENSG00000100519.7|proteasome (prosome, macropain) 26S subunit, ATPase, 6 	ENST00000556813.1|PSMC6|ENSG00000100519.7|proteasome (prosome, macropain) 26S subunit, ATPase, 6
hg19_v2_chr2_+_109204743_109204855	0.210401	HOXC9	ENST00000332345.6|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr1_+_81771806_81771876	0.209321	HOXC9	ENST00000370721.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370727.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370725.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370723.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370728.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370730.1|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr10_+_76871229_76871292	0.208156	HOXC9	ENST00000372690.3|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr11_+_71900703_71900725	0.208014	HOXC9	ENST00000393681.2|FOLR1|ENSG00000110195.7|folate receptor 1 (adult)
hg19_v2_chr9_+_2029019_2029164	0.207433	HOXC9	ENST00000382194.1|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
hg19_v2_chr8_-_93978333_93978345	0.206275	HOXC9	ENST00000524037.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000520430.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000521617.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr9_-_15472730_15472753	0.205061	HOXC9	ENST00000481862.1|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1
hg19_v2_chr8_-_81083731_81083813	0.203631	HOXC9	ENST00000379096.5|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr19_-_46105411_46105481	0.201491	HOXC9	ENST00000323040.4|GPR4|ENSG00000177464.4|G protein-coupled receptor 4 	ENST00000544371.1|OPA3|ENSG00000125741.4|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
hg19_v2_chr1_+_26798955_26799010	0.20003	HOXC9	ENST00000361427.5|HMGN2|ENSG00000198830.6|high mobility group nucleosomal binding domain 2
hg19_v2_chr10_-_71169031_71169044	0.19983	HOXC9	ENST00000373307.1|TACR2|ENSG00000075073.10|tachykinin receptor 2
hg19_v2_chr6_+_13272904_13272989	0.199443	HOXC9	ENST00000379335.3|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1 	ENST00000379329.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr16_-_66764119_66764138	0.198963	HOXC9	ENST00000569320.1|DYNC1LI2|ENSG00000135720.8|dynein, cytoplasmic 1, light intermediate chain 2
hg19_v2_chr15_-_54267147_54267170	0.197296	HOXC9	ENST00000558866.1|RP11-643A5.2|ENSG00000259669.1|RP11-643A5.2	ENST00000558920.1|RP11-643A5.2|ENSG00000259669.1|RP11-643A5.2
hg19_v2_chr17_+_29664830_29664844	0.196595	HOXC9	ENST00000444181.2|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000417592.2|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr4_-_85654615_85654615	0.194446	HOXC9	ENST00000514711.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3
hg19_v2_chr17_-_34257731_34257766	0.193907	HOXC9	ENST00000431884.2|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000425909.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000394528.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000430160.2|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chrX_-_16887963_16888014	0.192121	HOXC9	ENST00000380084.4|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7
hg19_v2_chr11_-_107729504_107729539	0.191792	HOXC9	ENST00000265836.7|SLC35F2|ENSG00000110660.10|solute carrier family 35, member F2
hg19_v2_chr2_+_37571845_37571874	0.18832	HOXC9	ENST00000537448.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chr12_-_118628350_118628371	0.188279	HOXC9	ENST00000537952.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000537822.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr12_+_20963647_20963666	0.187783	HOXC9	ENST00000381545.3|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3
hg19_v2_chr5_-_125930929_125931110	0.18552	HOXC9	ENST00000553117.1|ALDH7A1|ENSG00000164904.11|aldehyde dehydrogenase 7 family, member A1 	ENST00000447989.2|ALDH7A1|ENSG00000164904.11|aldehyde dehydrogenase 7 family, member A1 	ENST00000409134.3|ALDH7A1|ENSG00000164904.11|aldehyde dehydrogenase 7 family, member A1
hg19_v2_chr8_-_93978357_93978379	0.185216	HOXC9	ENST00000522925.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000522903.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000537541.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000518748.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000519069.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000521988.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chrM_+_10464_10480	0.184427	HOXC9	ENST00000361335.1|MT-ND4L|ENSG00000212907.2|mitochondrially encoded NADH dehydrogenase 4L
hg19_v2_chr10_+_98592009_98592061	0.18424	HOXC9	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr10_+_118608998_118609094	0.183497	HOXC9	ENST00000409522.1|ENO4|ENSG00000188316.9|enolase family member 4 	ENST00000341276.5|ENO4|ENSG00000188316.9|enolase family member 4 	ENST00000512864.2|ENO4|ENSG00000188316.9|enolase family member 4
hg19_v2_chr14_+_57671888_57671888	0.183148	HOXC9	ENST00000391612.1|AL391152.1|ENSG00000212928.1|AL391152.1
hg19_v2_chr3_+_56591184_56591255	0.180857	HOXC9	ENST00000422222.1|CCDC66|ENSG00000180376.12|coiled-coil domain containing 66 	ENST00000394672.3|CCDC66|ENSG00000180376.12|coiled-coil domain containing 66 	ENST00000326595.7|CCDC66|ENSG00000180376.12|coiled-coil domain containing 66
hg19_v2_chr8_-_81083890_81083901	0.178305	HOXC9	ENST00000518937.1|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr10_+_45495898_45495923	0.177975	HOXC9	ENST00000298299.3|ZNF22|ENSG00000165512.4|zinc finger protein 22
hg19_v2_chr8_+_76452097_76452126	0.177689	HOXC9	ENST00000396423.2|HNF4G|ENSG00000164749.7|hepatocyte nuclear factor 4, gamma
hg19_v2_chr1_+_32379174_32379174	0.176993	HOXC9	ENST00000391369.1|AL136115.1|ENSG00000212673.1|HCG2032337; PRO1848; Uncharacterized protein
hg19_v2_chr5_+_175288631_175288690	0.175501	HOXC9	ENST00000509837.1|CPLX2|ENSG00000145920.10|complexin 2
hg19_v2_chr7_+_130126012_130126069	0.172468	HOXC9	ENST00000341441.5|MEST|ENSG00000106484.10|mesoderm specific transcript
hg19_v2_chrX_+_120181457_120181474	0.17137	HOXC9	ENST00000328078.1|GLUD2|ENSG00000182890.3|glutamate dehydrogenase 2
hg19_v2_chr11_+_43333513_43333646	0.170119	HOXC9	ENST00000534695.1|API5|ENSG00000166181.8|apoptosis inhibitor 5 	ENST00000455725.2|API5|ENSG00000166181.8|apoptosis inhibitor 5 	ENST00000531273.1|API5|ENSG00000166181.8|apoptosis inhibitor 5 	ENST00000420461.2|API5|ENSG00000166181.8|apoptosis inhibitor 5 	ENST00000378852.3|API5|ENSG00000166181.8|apoptosis inhibitor 5 	ENST00000534600.1|API5|ENSG00000166181.8|apoptosis inhibitor 5
hg19_v2_chr11_+_125496400_125496464	0.168576	HOXC9	ENST00000524737.1|CHEK1|ENSG00000149554.8|checkpoint kinase 1
hg19_v2_chr11_+_115498761_115498783	0.164412	HOXC9	ENST00000424313.2|AP000997.1|ENSG00000255599.1|AP000997.1
hg19_v2_chr2_+_162016916_162016954	0.159958	HOXC9	ENST00000405852.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr6_+_143447322_143447387	0.159628	HOXC9	ENST00000458219.1|AIG1|ENSG00000146416.12|androgen-induced 1
hg19_v2_chr13_-_52027134_52027343	0.159295	HOXC9	ENST00000311234.4|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000425000.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000463928.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000442263.3|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000398119.2|INTS6|ENSG00000102786.10|integrator complex subunit 6
hg19_v2_chr2_-_86850949_86851023	0.158014	HOXC9	ENST00000237455.4|RNF103|ENSG00000239305.2|ring finger protein 103
hg19_v2_chr11_+_71900572_71900602	0.157767	HOXC9	ENST00000312293.4|FOLR1|ENSG00000110195.7|folate receptor 1 (adult)
hg19_v2_chr20_-_36152914_36152953	0.157706	HOXC9	ENST00000397131.1|BLCAP|ENSG00000166619.8|bladder cancer associated protein
hg19_v2_chr2_-_8723918_8723957	0.15739	HOXC9	ENST00000454224.1|AC011747.4|ENSG00000236008.1|AC011747.4
hg19_v2_chr4_-_100065419_100065434	0.15627	HOXC9	ENST00000504125.1|ADH4|ENSG00000198099.4|alcohol dehydrogenase 4 (class II), pi polypeptide 	ENST00000505590.1|ADH4|ENSG00000198099.4|alcohol dehydrogenase 4 (class II), pi polypeptide
hg19_v2_chr4_-_103749105_103749177	0.155811	HOXC9	ENST00000394801.4|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000394804.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr18_+_1099004_1099011	0.154293	HOXC9	ENST00000581556.1|RP11-78F17.1|ENSG00000263551.1|RP11-78F17.1
hg19_v2_chr15_-_76304731_76304785	0.1542	HOXC9	ENST00000394907.3|NRG4|ENSG00000169752.12|neuregulin 4
hg19_v2_chr15_-_90222642_90222658	0.153479	HOXC9	ENST00000430628.2|PLIN1|ENSG00000166819.7|perilipin 1
hg19_v2_chrX_-_119077695_119077757	0.153384	HOXC9	ENST00000371410.3|NKAP|ENSG00000101882.5|NFKB activating protein
hg19_v2_chr2_-_207630033_207630061	0.152964	HOXC9	ENST00000449792.1|MDH1B|ENSG00000138400.8|malate dehydrogenase 1B, NAD (soluble)
hg19_v2_chr21_-_27423339_27423352	0.152153	HOXC9	ENST00000415997.1|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr19_+_30433372_30433456	0.150603	HOXC9	ENST00000312051.6|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone
hg19_v2_chr12_-_10573149_10573194	0.149735	HOXC9	ENST00000381904.2|KLRC3|ENSG00000205810.4|killer cell lectin-like receptor subfamily C, member 3 	ENST00000381903.2|KLRC3|ENSG00000205810.4|killer cell lectin-like receptor subfamily C, member 3 	ENST00000396439.2|KLRC3|ENSG00000205810.4|killer cell lectin-like receptor subfamily C, member 3
hg19_v2_chr12_-_124118151_124118253	0.148381	HOXC9	ENST00000534960.1|EIF2B1|ENSG00000111361.8|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa
hg19_v2_chr5_+_156696362_156696374	0.145592	HOXC9	ENST00000377576.3|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2
hg19_v2_chr15_+_69857515_69857531	0.145388	HOXC9	ENST00000559477.1|RP11-279F6.1|ENSG00000245750.3|RP11-279F6.1
hg19_v2_chr10_+_102222798_102222798	0.145155	HOXC9	ENST00000343737.5|WNT8B|ENSG00000075290.7|wingless-type MMTV integration site family, member 8B
hg19_v2_chr11_+_73498973_73498982	0.144156	HOXC9	ENST00000537007.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48
hg19_v2_chr14_+_62164340_62164443	0.143492	HOXC9	ENST00000557538.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 	ENST00000539097.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v2_chrX_-_68385354_68385369	0.141813	HOXC9	ENST00000361478.1|PJA1|ENSG00000181191.11|praja ring finger 1, E3 ubiquitin protein ligase
hg19_v2_chr9_+_131062367_131062367	0.141347	HOXC9	ENST00000601297.1|AL359091.2|ENSG00000268211.1|CDNA: FLJ21673 fis, clone COL09042; HCG2036511; Uncharacterized protein
hg19_v2_chr14_+_67291158_67291192	0.1413	HOXC9	ENST00000555456.1|GPHN|ENSG00000171723.11|gephyrin
hg19_v2_chr3_+_41241596_41241612	0.141297	HOXC9	ENST00000450969.1|CTNNB1|ENSG00000168036.12|catenin (cadherin-associated protein), beta 1, 88kDa
hg19_v2_chr12_+_20963632_20963645	0.140498	HOXC9	ENST00000540853.1|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3 	ENST00000261196.2|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3
hg19_v2_chr13_+_36050881_36050887	0.138855	HOXC9	ENST00000537702.1|NBEA|ENSG00000172915.14|neurobeachin
hg19_v2_chr9_-_20382446_20382493	0.138673	HOXC9	ENST00000380321.1|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
hg19_v2_chr1_+_233086326_233086415	0.136193	HOXC9	ENST00000366628.5|NTPCR|ENSG00000135778.7|nucleoside-triphosphatase, cancer-related 	ENST00000366627.4|NTPCR|ENSG00000135778.7|nucleoside-triphosphatase, cancer-related
hg19_v2_chrX_+_150565653_150565694	0.13575	HOXC9	ENST00000330374.6|VMA21|ENSG00000160131.9|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
hg19_v2_chr5_-_111093167_111093252	0.135529	HOXC9	ENST00000446294.2|NREP|ENSG00000134986.9|neuronal regeneration related protein 	ENST00000419114.2|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr10_-_94257512_94257524	0.135502	HOXC9	ENST00000371581.5|IDE|ENSG00000119912.11|insulin-degrading enzyme
hg19_v2_chr7_-_76955563_76955591	0.13519	HOXC9	ENST00000441833.2|GSAP|ENSG00000186088.11|gamma-secretase activating protein
hg19_v2_chr16_+_28505955_28506001	0.134821	HOXC9	ENST00000564831.1|APOBR|ENSG00000184730.6|apolipoprotein B receptor 	ENST00000328423.5|APOBR|ENSG00000184730.6|apolipoprotein B receptor 	ENST00000431282.1|APOBR|ENSG00000184730.6|apolipoprotein B receptor
hg19_v2_chr13_+_96085847_96085864	0.133161	HOXC9	ENST00000376873.3|CLDN10|ENSG00000134873.5|claudin 10
hg19_v2_chr2_+_128458514_128458597	0.132157	HOXC9	ENST00000310981.4|SFT2D3|ENSG00000173349.4|SFT2 domain containing 3
hg19_v2_chrX_-_68385274_68385350	0.130409	HOXC9	ENST00000374584.3|PJA1|ENSG00000181191.11|praja ring finger 1, E3 ubiquitin protein ligase 	ENST00000590146.1|PJA1|ENSG00000181191.11|praja ring finger 1, E3 ubiquitin protein ligase
hg19_v2_chr6_+_111408698_111408781	0.12993	HOXC9	ENST00000368851.5|SLC16A10|ENSG00000112394.12|solute carrier family 16 (aromatic amino acid transporter), member 10
hg19_v2_chr17_+_48823975_48824003	0.129291	HOXC9	ENST00000513969.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000503728.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae)
hg19_v2_chr12_+_19358228_19358259	0.129157	HOXC9	ENST00000424268.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5 	ENST00000543806.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5
hg19_v2_chr11_-_3400442_3400453	0.128876	HOXC9	ENST00000429541.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000532539.1|ZNF195|ENSG00000005801.12|zinc finger protein 195
hg19_v2_chr1_-_148347506_148347506	0.127388	HOXC9	ENST00000369189.3|NBPF20|ENSG00000203832.6|neuroblastoma breakpoint family, member 20
hg19_v2_chr4_-_69536346_69536371	0.126954	HOXC9	ENST00000338206.5|UGT2B15|ENSG00000196620.4|UDP glucuronosyltransferase 2 family, polypeptide B15
hg19_v2_chr5_+_169011033_169011108	0.125566	HOXC9	ENST00000513795.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1
hg19_v2_chr21_+_17442799_17442853	0.125329	HOXC9	ENST00000602580.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000458468.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000602935.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr7_+_7606497_7606595	0.123934	HOXC9	ENST00000340080.4|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000405785.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000433635.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila)
hg19_v2_chr19_+_21264980_21265026	0.123545	HOXC9	ENST00000596053.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000597086.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000596143.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000596367.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000601416.1|ZNF714|ENSG00000160352.11|zinc finger protein 714
hg19_v2_chr4_-_103749313_103749331	0.122803	HOXC9	ENST00000394803.5|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chrX_-_135338503_135338641	0.122421	HOXC9	ENST00000370663.5|MAP7D3|ENSG00000129680.11|MAP7 domain containing 3
hg19_v2_chr12_-_31743901_31743956	0.121118	HOXC9	ENST00000354285.4|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr5_-_68665296_68665381	0.121077	HOXC9	ENST00000512152.1|TAF9|ENSG00000085231.9|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa 	ENST00000503245.1|TAF9|ENSG00000085231.9|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa 	ENST00000512561.1|TAF9|ENSG00000085231.9|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa 	ENST00000380822.4|TAF9|ENSG00000085231.9|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa
hg19_v2_chr2_-_70475701_70475717	0.120046	HOXC9	ENST00000282574.4|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr6_-_111804905_111804921	0.119939	HOXC9	ENST00000358835.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000435970.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chr3_-_25824872_25824913	0.119361	HOXC9	ENST00000308710.5|NGLY1|ENSG00000151092.12|N-glycanase 1
hg19_v2_chr4_+_187148556_187148687	0.119272	HOXC9	ENST00000264690.6|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1 	ENST00000446598.2|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1 	ENST00000414291.1|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1 	ENST00000513864.1|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1
hg19_v2_chr7_+_64838786_64838809	0.116949	HOXC9	ENST00000450302.2|ZNF92|ENSG00000146757.9|zinc finger protein 92
hg19_v2_chr3_-_134092561_134092639	0.115395	HOXC9	ENST00000510560.1|AMOTL2|ENSG00000114019.10|angiomotin like 2 	ENST00000504234.1|AMOTL2|ENSG00000114019.10|angiomotin like 2 	ENST00000515172.1|AMOTL2|ENSG00000114019.10|angiomotin like 2
hg19_v2_chr2_-_134326009_134326053	0.113571	HOXC9	ENST00000409261.1|NCKAP5|ENSG00000176771.11|NCK-associated protein 5 	ENST00000409213.1|NCKAP5|ENSG00000176771.11|NCK-associated protein 5
hg19_v2_chr2_+_37571717_37571779	0.113488	HOXC9	ENST00000338415.3|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase 	ENST00000404976.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chr1_-_212004090_212004168	0.113395	HOXC9	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chr19_+_45165545_45165545	0.112493	HOXC9	ENST00000592472.1|CEACAM19|ENSG00000186567.8|carcinoembryonic antigen-related cell adhesion molecule 19 	ENST00000587729.1|CEACAM19|ENSG00000186567.8|carcinoembryonic antigen-related cell adhesion molecule 19 	ENST00000585657.1|CEACAM19|ENSG00000186567.8|carcinoembryonic antigen-related cell adhesion molecule 19 	ENST00000592789.1|CEACAM19|ENSG00000186567.8|carcinoembryonic antigen-related cell adhesion molecule 19 	ENST00000591979.1|CEACAM19|ENSG00000186567.8|carcinoembryonic antigen-related cell adhesion molecule 19
hg19_v2_chr5_-_65018834_65018863	0.112174	HOXC9	ENST00000506816.1|SGTB|ENSG00000197860.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
hg19_v2_chr1_+_212965170_212965274	0.110782	HOXC9	ENST00000532324.1|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3 	ENST00000366974.4|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3 	ENST00000530441.1|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3 	ENST00000526641.1|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3 	ENST00000531963.1|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3 	ENST00000366973.4|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3 	ENST00000526997.1|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3 	ENST00000488246.2|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3
hg19_v2_chr2_-_70475586_70475646	0.109438	HOXC9	ENST00000416149.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr2_+_162016804_162016814	0.10803	HOXC9	ENST00000392749.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000440506.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr6_-_135424186_135424200	0.107848	HOXC9	ENST00000529882.1|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae)
hg19_v2_chr2_-_208031943_208031991	0.106767	HOXC9	ENST00000421199.1|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous) 	ENST00000457962.1|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr2_-_207629997_207630030	0.105907	HOXC9	ENST00000454776.2|MDH1B|ENSG00000138400.8|malate dehydrogenase 1B, NAD (soluble)
hg19_v2_chr7_-_22539771_22539824	0.10578	HOXC9	ENST00000406890.2|STEAP1B|ENSG00000105889.10|STEAP family member 1B 	ENST00000424363.1|STEAP1B|ENSG00000105889.10|STEAP family member 1B
hg19_v2_chr15_-_90222610_90222634	0.10469	HOXC9	ENST00000300055.5|PLIN1|ENSG00000166819.7|perilipin 1
hg19_v2_chr3_-_170587815_170587826	0.104527	HOXC9	ENST00000466674.1|RPL22L1|ENSG00000163584.13|ribosomal protein L22-like 1
hg19_v2_chr5_+_98109322_98109350	0.103721	HOXC9	ENST00000513185.1|RGMB|ENSG00000174136.7|repulsive guidance molecule family member b
hg19_v2_chr5_-_176433693_176433812	0.103122	HOXC9	ENST00000507513.1|UIMC1|ENSG00000087206.12|ubiquitin interaction motif containing 1 	ENST00000511320.1|UIMC1|ENSG00000087206.12|ubiquitin interaction motif containing 1
hg19_v2_chr4_+_71600144_71600159	0.102925	HOXC9	ENST00000502653.1|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr8_-_62602327_62602408	0.100621	HOXC9	ENST00000445642.3|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517847.2|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000389204.4|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517661.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517903.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000522603.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000522349.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000522835.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000541428.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000518306.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase
hg19_v2_chr4_+_100737954_100738014	0.0996155	HOXC9	ENST00000296414.7|DAPP1|ENSG00000070190.8|dual adaptor of phosphotyrosine and 3-phosphoinositides 	ENST00000512369.1|DAPP1|ENSG00000070190.8|dual adaptor of phosphotyrosine and 3-phosphoinositides
hg19_v2_chr8_-_30670384_30670394	0.0989709	HOXC9	ENST00000221138.4|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme 	ENST00000518243.1|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme
hg19_v2_chr10_+_74927875_74927924	0.0970527	HOXC9	ENST00000242505.6|FAM149B1|ENSG00000138286.10|family with sequence similarity 149, member B1
hg19_v2_chr8_-_80993010_80993073	0.0967423	HOXC9	ENST00000537855.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000520527.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000517427.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000448733.2|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000379097.3|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr3_-_124653579_124653601	0.0945909	HOXC9	ENST00000478191.1|MUC13|ENSG00000173702.3|mucin 13, cell surface associated 	ENST00000311075.3|MUC13|ENSG00000173702.3|mucin 13, cell surface associated
hg19_v2_chr16_-_56553882_56553992	0.0932736	HOXC9	ENST00000568104.1|BBS2|ENSG00000125124.7|Bardet-Biedl syndrome 2
hg19_v2_chr2_-_230096756_230096801	0.0927137	HOXC9	ENST00000354069.6|PID1|ENSG00000153823.14|phosphotyrosine interaction domain containing 1
hg19_v2_chr11_-_107729287_107729310	0.0921273	HOXC9	ENST00000375682.4|SLC35F2|ENSG00000110660.10|solute carrier family 35, member F2
hg19_v2_chrX_-_130423200_130423228	0.0916739	HOXC9	ENST00000361420.3|IGSF1|ENSG00000147255.13|immunoglobulin superfamily, member 1
hg19_v2_chr1_+_151735431_151735446	0.0915246	HOXC9	ENST00000321531.5|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3 	ENST00000315067.8|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3
hg19_v2_chr2_-_224467093_224467221	0.0909719	HOXC9	ENST00000305409.2|SCG2|ENSG00000171951.4|secretogranin II
hg19_v2_chr10_-_113943447_113943536	0.090829	HOXC9	ENST00000369425.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000348367.4|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000423155.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial
hg19_v2_chr18_-_12656715_12656735	0.0907783	HOXC9	ENST00000462226.1|SPIRE1|ENSG00000134278.10|spire-type actin nucleation factor 1 	ENST00000497844.2|SPIRE1|ENSG00000134278.10|spire-type actin nucleation factor 1 	ENST00000309836.5|SPIRE1|ENSG00000134278.10|spire-type actin nucleation factor 1 	ENST00000453447.2|SPIRE1|ENSG00000134278.10|spire-type actin nucleation factor 1
hg19_v2_chr18_-_59274139_59274190	0.0903137	HOXC9	ENST00000586949.1|RP11-879F14.2|ENSG00000267279.1|RP11-879F14.2
hg19_v2_chr1_-_113478603_113478658	0.0893147	HOXC9	ENST00000443580.1|SLC16A1|ENSG00000155380.7|solute carrier family 16 (monocarboxylate transporter), member 1
hg19_v2_chr4_-_52883786_52883786	0.0888856	HOXC9	ENST00000343457.3|LRRC66|ENSG00000188993.3|leucine rich repeat containing 66
hg19_v2_chr10_+_115614370_115614436	0.088294	HOXC9	ENST00000369301.3|NHLRC2|ENSG00000196865.4|NHL repeat containing 2
hg19_v2_chr9_-_104198042_104198105	0.0880973	HOXC9	ENST00000374855.4|ALDOB|ENSG00000136872.13|aldolase B, fructose-bisphosphate
hg19_v2_chr19_-_35068562_35068606	0.0878869	HOXC9	ENST00000595013.1|SCGB1B2P|ENSG00000268751.1|secretoglobin, family 1B, member 2, pseudogene
hg19_v2_chr14_+_20187174_20187174	0.0873053	HOXC9	ENST00000557414.1|OR4N2|ENSG00000176294.3|olfactory receptor, family 4, subfamily N, member 2
hg19_v2_chr7_+_138915102_138915102	0.0870502	HOXC9	ENST00000486663.1|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr7_+_102937869_102937909	0.0860544	HOXC9	ENST00000249269.4|PMPCB|ENSG00000105819.9|peptidase (mitochondrial processing) beta 	ENST00000428154.1|PMPCB|ENSG00000105819.9|peptidase (mitochondrial processing) beta 	ENST00000420236.2|PMPCB|ENSG00000105819.9|peptidase (mitochondrial processing) beta
hg19_v2_chr2_+_187371440_187371567	0.0849374	HOXC9	ENST00000445547.1|ZC3H15|ENSG00000065548.13|zinc finger CCCH-type containing 15
hg19_v2_chr16_+_56782118_56782261	0.0841223	HOXC9	ENST00000566678.1|NUP93|ENSG00000102900.8|nucleoporin 93kDa
hg19_v2_chr1_+_81106951_81107001	0.08393	HOXC9	ENST00000443565.1|RP5-887A10.1|ENSG00000234184.1|RP5-887A10.1
hg19_v2_chr3_-_170587974_170587993	0.0832747	HOXC9	ENST00000463836.1|RPL22L1|ENSG00000163584.13|ribosomal protein L22-like 1
hg19_v2_chr8_+_91233744_91233747	0.08226	HOXC9	ENST00000524361.1|LINC00534|ENSG00000253394.1|long intergenic non-protein coding RNA 534
hg19_v2_chr1_+_244515930_244515950	0.0810401	HOXC9	ENST00000366537.1|C1orf100|ENSG00000173728.6|chromosome 1 open reading frame 100 	ENST00000308105.4|C1orf100|ENSG00000173728.6|chromosome 1 open reading frame 100
hg19_v2_chr16_+_19619083_19619132	0.0804773	HOXC9	ENST00000538552.1|C16orf62|ENSG00000103544.10|chromosome 16 open reading frame 62
hg19_v2_chrX_-_73512411_73512444	0.0801256	HOXC9	ENST00000602576.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding) 	ENST00000429124.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding)
hg19_v2_chr4_-_69215467_69215532	0.08012	HOXC9	ENST00000579690.1|YTHDC1|ENSG00000083896.8|YTH domain containing 1
hg19_v2_chr2_+_233390890_233390903	0.0782298	HOXC9	ENST00000258385.3|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000536614.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000457943.2|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle)
hg19_v2_chr22_-_24126145_24126145	0.0774623	HOXC9	ENST00000598975.1|AP000349.1|ENSG00000267954.1|Uncharacterized protein
hg19_v2_chr9_+_80912059_80912081	0.074793	HOXC9	ENST00000347159.2|PSAT1|ENSG00000135069.9|phosphoserine aminotransferase 1 	ENST00000376588.3|PSAT1|ENSG00000135069.9|phosphoserine aminotransferase 1
hg19_v2_chr2_+_162016827_162016876	0.0734687	HOXC9	ENST00000429217.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000406287.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000402568.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr5_-_22853429_22853462	0.0731762	HOXC9	ENST00000504376.2|CDH12|ENSG00000154162.9|cadherin 12, type 2 (N-cadherin 2)
hg19_v2_chr12_-_11091862_11091862	0.0730139	HOXC9	ENST00000537503.1|TAS2R14|ENSG00000212127.5|taste receptor, type 2, member 14
hg19_v2_chr7_-_111424506_111424539	0.0724041	HOXC9	ENST00000450156.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000494651.2|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr1_+_149230680_149230716	0.0704867	HOXC9	ENST00000443018.1|RP11-403I13.5|ENSG00000232721.1|RP11-403I13.5
hg19_v2_chr12_-_8803128_8803164	0.0701592	HOXC9	ENST00000543467.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr5_+_135468516_135468621	0.0697664	HOXC9	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr14_-_45252031_45252036	0.0697498	HOXC9	ENST00000556405.1|RP11-398E10.1|ENSG00000258998.1|RP11-398E10.1
hg19_v2_chr9_-_179018_179072	0.0675966	HOXC9	ENST00000431099.2|CBWD1|ENSG00000172785.14|COBW domain containing 1 	ENST00000382447.4|CBWD1|ENSG00000172785.14|COBW domain containing 1 	ENST00000382389.1|CBWD1|ENSG00000172785.14|COBW domain containing 1 	ENST00000377447.3|CBWD1|ENSG00000172785.14|COBW domain containing 1 	ENST00000314367.10|CBWD1|ENSG00000172785.14|COBW domain containing 1 	ENST00000356521.4|CBWD1|ENSG00000172785.14|COBW domain containing 1 	ENST00000382393.1|CBWD1|ENSG00000172785.14|COBW domain containing 1 	ENST00000377400.4|CBWD1|ENSG00000172785.14|COBW domain containing 1
hg19_v2_chr10_-_115614127_115614176	0.0667693	HOXC9	ENST00000369305.1|DCLRE1A|ENSG00000198924.3|DNA cross-link repair 1A
hg19_v2_chr6_+_130339710_130339745	0.0649397	HOXC9	ENST00000526087.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000533560.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000361794.2|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila)
hg19_v2_chr17_+_68071458_68071481	0.0647589	HOXC9	ENST00000589377.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr6_-_121655850_121655891	0.0620887	HOXC9	ENST00000422369.1|TBC1D32|ENSG00000146350.9|TBC1 domain family, member 32
hg19_v2_chr14_-_21566731_21566836	0.061075	HOXC9	ENST00000360947.3|ZNF219|ENSG00000165804.11|zinc finger protein 219
hg19_v2_chr4_-_103748880_103749047	0.0604477	HOXC9	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr13_+_24844979_24844994	0.058351	HOXC9	ENST00000454083.1|SPATA13|ENSG00000182957.11|spermatogenesis associated 13
hg19_v2_chr16_-_12897642_12897874	0.0580797	HOXC9	ENST00000433677.2|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1 	ENST00000261660.4|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1 	ENST00000381774.4|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1
hg19_v2_chr2_-_70475730_70475798	0.0574773	HOXC9	ENST00000445587.1|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000433529.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000415783.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr5_-_16738451_16738523	0.0568814	HOXC9	ENST00000274203.9|MYO10|ENSG00000145555.10|myosin X 	ENST00000515803.1|MYO10|ENSG00000145555.10|myosin X
hg19_v2_chr5_-_16916624_16916641	0.0555979	HOXC9	ENST00000513882.1|MYO10|ENSG00000145555.10|myosin X
hg19_v2_chrX_+_13671225_13671327	0.0546605	HOXC9	ENST00000545566.1|TCEANC|ENSG00000176896.7|transcription elongation factor A (SII) N-terminal and central domain containing 	ENST00000544987.1|TCEANC|ENSG00000176896.7|transcription elongation factor A (SII) N-terminal and central domain containing 	ENST00000314720.4|TCEANC|ENSG00000176896.7|transcription elongation factor A (SII) N-terminal and central domain containing
hg19_v2_chr9_-_128246769_128246780	0.0537102	HOXC9	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr3_+_16306691_16306752	0.0528499	HOXC9	ENST00000285083.5|OXNAD1|ENSG00000154814.9|oxidoreductase NAD-binding domain containing 1 	ENST00000605932.1|OXNAD1|ENSG00000154814.9|oxidoreductase NAD-binding domain containing 1 	ENST00000435829.2|OXNAD1|ENSG00000154814.9|oxidoreductase NAD-binding domain containing 1
hg19_v2_chr4_-_103749179_103749195	0.0527611	HOXC9	ENST00000502690.1|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr7_-_111424462_111424496	0.0522568	HOXC9	ENST00000437129.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chrX_+_139791917_139791938	0.051838	HOXC9	ENST00000607004.1|LINC00632|ENSG00000203930.6|long intergenic non-protein coding RNA 632 	ENST00000370535.3|LINC00632|ENSG00000203930.6|long intergenic non-protein coding RNA 632
hg19_v2_chr3_+_111630451_111630470	0.0515755	HOXC9	ENST00000495180.1|PHLDB2|ENSG00000144824.15|pleckstrin homology-like domain, family B, member 2
hg19_v2_chrX_+_123097014_123097033	0.0510369	HOXC9	ENST00000394478.1|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chr18_+_22040593_22040616	0.050519	HOXC9	ENST00000256906.4|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr2_+_219472488_219472534	0.0489404	HOXC9	ENST00000450993.2|PLCD4|ENSG00000115556.9|phospholipase C, delta 4
hg19_v2_chr12_+_123259063_123259079	0.0453617	HOXC9	ENST00000392441.4|CCDC62|ENSG00000130783.9|coiled-coil domain containing 62 	ENST00000539171.1|CCDC62|ENSG00000130783.9|coiled-coil domain containing 62
hg19_v2_chr22_-_32651326_32651340	0.0447306	HOXC9	ENST00000266086.4|SLC5A4|ENSG00000100191.4|solute carrier family 5 (glucose activated ion channel), member 4
hg19_v2_chr15_+_40987327_40987397	0.0446865	HOXC9	ENST00000423169.2|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000267868.3|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000557850.1|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000532743.1|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000382643.3|RAD51|ENSG00000051180.12|RAD51 recombinase
hg19_v2_chr19_+_21265028_21265056	0.0444114	HOXC9	ENST00000291770.7|ZNF714|ENSG00000160352.11|zinc finger protein 714
hg19_v2_chr11_+_19798964_19799013	0.0442243	HOXC9	ENST00000527559.2|NAV2|ENSG00000166833.15|neuron navigator 2
hg19_v2_chr7_-_44580861_44580914	0.0440396	HOXC9	ENST00000546276.1|NPC1L1|ENSG00000015520.10|NPC1-like 1 	ENST00000289547.4|NPC1L1|ENSG00000015520.10|NPC1-like 1 	ENST00000381160.3|NPC1L1|ENSG00000015520.10|NPC1-like 1 	ENST00000423141.1|NPC1L1|ENSG00000015520.10|NPC1-like 1
hg19_v2_chr2_+_109204909_109204928	0.0431358	HOXC9	ENST00000393310.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr1_+_202789394_202789394	0.0425738	HOXC9	ENST00000330493.5|RP11-480I12.4|ENSG00000184774.6|Putative inactive alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein LOC641515
hg19_v2_chr2_+_48541776_48541874	0.0411836	HOXC9	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr19_-_48753064_48753095	0.04111	HOXC9	ENST00000520153.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8 	ENST00000357778.5|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8 	ENST00000520015.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chrX_+_105937068_105937091	0.040911	HOXC9	ENST00000324342.3|RNF128|ENSG00000133135.9|ring finger protein 128, E3 ubiquitin protein ligase
hg19_v2_chr5_-_42812143_42812181	0.0404577	HOXC9	ENST00000514985.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1
hg19_v2_chr15_+_45003675_45003724	0.0402539	HOXC9	ENST00000558401.1|B2M|ENSG00000166710.13|beta-2-microglobulin 	ENST00000559916.1|B2M|ENSG00000166710.13|beta-2-microglobulin 	ENST00000544417.1|B2M|ENSG00000166710.13|beta-2-microglobulin
hg19_v2_chr10_+_32873190_32873190	0.0391456	HOXC9	ENST00000375025.4|C10orf68|ENSG00000150076.18|Homo sapiens coiled-coil domain containing 7 (CCDC7), transcript variant 5, mRNA.
hg19_v2_chr22_-_38240316_38240349	0.0389642	HOXC9	ENST00000411961.2|ANKRD54|ENSG00000100124.8|ankyrin repeat domain 54 	ENST00000434930.1|ANKRD54|ENSG00000100124.8|ankyrin repeat domain 54
hg19_v2_chr12_-_63328817_63328870	0.0370946	HOXC9	ENST00000228705.6|PPM1H|ENSG00000111110.7|protein phosphatase, Mg2+/Mn2+ dependent, 1H
hg19_v2_chr2_-_111230393_111230393	0.0369716	HOXC9	ENST00000447537.2|LIMS3L|ENSG00000257207.4|LIM and senescent cell antigen-like-containing domain protein 3; Uncharacterized protein; cDNA FLJ59124, highly similar to Particularly interesting newCys-His protein; cDNA, FLJ79109, highly similar to Particularly interesting newCys-His protein  	ENST00000413601.2|LIMS3L|ENSG00000256671.5|LIM and senescent cell antigen-like domains 3-like
hg19_v2_chr4_-_39979576_39979588	0.0369292	HOXC9	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chr10_-_27529486_27529497	0.0360394	HOXC9	ENST00000375888.1|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5
hg19_v2_chr8_-_82608409_82608409	0.0350112	HOXC9	ENST00000518568.1|SLC10A5|ENSG00000253598.1|solute carrier family 10, member 5
hg19_v2_chr14_-_55907334_55907334	0.0348003	HOXC9	ENST00000247219.5|TBPL2|ENSG00000182521.5|TATA box binding protein like 2
hg19_v2_chr12_-_21757774_21757796	0.0344008	HOXC9	ENST00000261195.2|GYS2|ENSG00000111713.2|glycogen synthase 2 (liver)
hg19_v2_chr16_-_56485257_56485287	0.0340562	HOXC9	ENST00000300291.5|NUDT21|ENSG00000167005.9|nudix (nucleoside diphosphate linked moiety X)-type motif 21
hg19_v2_chr11_-_111649015_111649030	0.0335032	HOXC9	ENST00000529841.1|RP11-108O10.2|ENSG00000254990.1|RP11-108O10.2
hg19_v2_chr2_+_234526272_234526291	0.0326956	HOXC9	ENST00000373450.4|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8
hg19_v2_chr11_+_125496124_125496344	0.0322162	HOXC9	ENST00000533778.2|CHEK1|ENSG00000149554.8|checkpoint kinase 1 	ENST00000534070.1|CHEK1|ENSG00000149554.8|checkpoint kinase 1
hg19_v2_chr11_-_3400330_3400422	0.0318396	HOXC9	ENST00000427810.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000005082.9|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000534569.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000438262.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000528796.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000528410.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000529678.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000354599.6|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000526601.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000525502.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000533036.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000399602.4|ZNF195|ENSG00000005801.12|zinc finger protein 195
hg19_v2_chrX_+_41193407_41193422	0.0310323	HOXC9	ENST00000457138.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 	ENST00000441189.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr17_+_42264556_42264649	0.0308997	HOXC9	ENST00000319511.6|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000589785.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000592825.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000589184.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2
hg19_v2_chr17_+_67498538_67498570	0.0294495	HOXC9	ENST00000589647.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr16_-_12070468_12070510	0.0285728	HOXC9	ENST00000538896.1|RP11-166B2.1|ENSG00000234719.4|Putative NPIP-like protein LOC729978
hg19_v2_chr8_-_93978309_93978331	0.0284484	HOXC9	ENST00000517858.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000378861.5|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr17_-_34257771_34257786	0.0267853	HOXC9	ENST00000394529.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000293273.6|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chrX_-_73512358_73512402	0.0265556	HOXC9	ENST00000602776.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding)
hg19_v2_chr16_-_50715239_50715264	0.0256126	HOXC9	ENST00000330943.4|SNX20|ENSG00000167208.10|sorting nexin 20 	ENST00000300590.3|SNX20|ENSG00000167208.10|sorting nexin 20
hg19_v2_chr1_+_12524965_12525019	0.0253391	HOXC9	ENST00000471923.1|VPS13D|ENSG00000048707.9|vacuolar protein sorting 13 homolog D (S. cerevisiae)
hg19_v2_chr8_-_101718991_101719023	0.0249754	HOXC9	ENST00000517990.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr2_+_109237717_109237729	0.0247414	HOXC9	ENST00000409441.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr6_+_83903061_83903113	0.0241884	HOXC9	ENST00000369724.4|RWDD2A|ENSG00000013392.6|RWD domain containing 2A 	ENST00000539997.1|RWDD2A|ENSG00000013392.6|RWD domain containing 2A
hg19_v2_chr1_+_40506392_40506554	0.0235825	HOXC9	ENST00000414893.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000414281.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000420216.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000372792.2|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000372798.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000340450.3|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000372805.3|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000435719.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000427843.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000417287.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000424977.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000446031.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast)
hg19_v2_chr7_-_156685890_156685924	0.0228938	HOXC9	ENST00000353442.5|LMBR1|ENSG00000105983.15|limb development membrane protein 1
hg19_v2_chr16_+_72090053_72090060	0.0218469	HOXC9	ENST00000576168.2|HP|ENSG00000257017.4|haptoglobin 	ENST00000567185.3|HP|ENSG00000257017.4|haptoglobin 	ENST00000567612.2|HP|ENSG00000257017.4|haptoglobin
hg19_v2_chr1_+_16348366_16348486	0.0206545	HOXC9	ENST00000375692.1|CLCNKA|ENSG00000186510.7|chloride channel, voltage-sensitive Ka 	ENST00000420078.1|CLCNKA|ENSG00000186510.7|chloride channel, voltage-sensitive Ka
hg19_v2_chr1_+_47603109_47603127	0.0191883	HOXC9	ENST00000371890.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22 	ENST00000294337.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22 	ENST00000371891.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22
hg19_v2_chr12_+_25348139_25348162	0.015947	HOXC9	ENST00000557540.2|LYRM5|ENSG00000205707.6|LYR motif containing 5 	ENST00000381356.4|LYRM5|ENSG00000205707.6|LYR motif containing 5
hg19_v2_chrX_-_9734004_9734027	0.0144623	HOXC9	ENST00000467482.1|GPR143|ENSG00000101850.8|G protein-coupled receptor 143 	ENST00000380929.2|GPR143|ENSG00000101850.8|G protein-coupled receptor 143
hg19_v2_chr2_+_233390863_233390878	0.0144587	HOXC9	ENST00000449596.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000543200.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle)
hg19_v2_chr12_+_32687221_32687267	0.0133675	HOXC9	ENST00000525053.1|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4
hg19_v2_chr1_+_40862501_40862512	0.0133362	HOXC9	ENST00000539317.1|SMAP2|ENSG00000084070.7|small ArfGAP2
hg19_v2_chr8_+_52730143_52730143	0.0121174	HOXC9	ENST00000415643.1|AC090186.1|ENSG00000232941.1|Uncharacterized protein
hg19_v2_chr11_+_63606373_63606418	0.0120007	HOXC9	ENST00000402010.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000315032.8|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377809.4|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000413835.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377810.3|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2
hg19_v2_chr6_-_83903600_83903655	0.0106092	HOXC9	ENST00000506587.1|PGM3|ENSG00000013375.11|phosphoglucomutase 3 	ENST00000507554.1|PGM3|ENSG00000013375.11|phosphoglucomutase 3
hg19_v2_chr4_+_106631966_106632003	0.0101134	HOXC9	ENST00000360505.5|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000510865.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000509336.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing
hg19_v2_chr4_+_69681710_69681716	0.00866494	HOXC9	ENST00000265403.7|UGT2B10|ENSG00000109181.7|UDP glucuronosyltransferase 2 family, polypeptide B10 	ENST00000458688.2|UGT2B10|ENSG00000109181.7|UDP glucuronosyltransferase 2 family, polypeptide B10
hg19_v2_chr18_+_12407895_12407975	0.00596098	HOXC9	ENST00000590956.1|SLMO1|ENSG00000141391.9|slowmo homolog 1 (Drosophila) 	ENST00000336990.4|SLMO1|ENSG00000141391.9|slowmo homolog 1 (Drosophila) 	ENST00000440960.1|SLMO1|ENSG00000141391.9|slowmo homolog 1 (Drosophila) 	ENST00000588729.1|SLMO1|ENSG00000141391.9|slowmo homolog 1 (Drosophila)
hg19_v2_chr14_-_78174344_78174381	0.00487019	HOXC9	ENST00000216489.3|ALKBH1|ENSG00000100601.5|alkB, alkylation repair homolog 1 (E. coli)
hg19_v2_chr8_+_16884740_16884804	0.00471291	HOXC9	ENST00000318063.5|MICU3|ENSG00000155970.7|mitochondrial calcium uptake family, member 3
hg19_v2_chr15_+_93749295_93749295	0.00452179	HOXC9	ENST00000599897.1|AC112693.2|ENSG00000269360.1|AC112693.2
hg19_v2_chr8_+_12808834_12808898	0.00441859	HOXC9	ENST00000400069.3|KIAA1456|ENSG00000250305.4|KIAA1456
hg19_v2_chr18_-_74839891_74839921	0.00419066	HOXC9	ENST00000581878.1|MBP|ENSG00000197971.10|myelin basic protein
hg19_v2_chr9_+_70856899_70856957	0.00409084	HOXC9	ENST00000377342.5|CBWD3|ENSG00000196873.11|COBW domain containing 3 	ENST00000478048.1|CBWD3|ENSG00000196873.11|COBW domain containing 3
hg19_v2_chr16_+_56485402_56485490	0.00370382	HOXC9	ENST00000566157.1|OGFOD1|ENSG00000087263.12|2-oxoglutarate and iron-dependent oxygenase domain containing 1 	ENST00000562150.1|OGFOD1|ENSG00000087263.12|2-oxoglutarate and iron-dependent oxygenase domain containing 1 	ENST00000561646.1|OGFOD1|ENSG00000087263.12|2-oxoglutarate and iron-dependent oxygenase domain containing 1 	ENST00000568397.1|OGFOD1|ENSG00000087263.12|2-oxoglutarate and iron-dependent oxygenase domain containing 1
hg19_v2_chr16_+_25228242_25228273	0.00267429	HOXC9	ENST00000219660.5|AQP8|ENSG00000103375.6|aquaporin 8
hg19_v2_chr7_+_1084206_1084255	0.00246804	HOXC9	ENST00000444847.1|GPR146|ENSG00000164849.7|G protein-coupled receptor 146
hg19_v2_chr15_+_45544426_45544451	0.00206158	HOXC9	ENST00000347644.3|SLC28A2|ENSG00000137860.7|solute carrier family 28 (concentrative nucleoside transporter), member 2 	ENST00000560438.1|SLC28A2|ENSG00000137860.7|solute carrier family 28 (concentrative nucleoside transporter), member 2
hg19_v2_chr1_-_113615699_113615730	0.00159008	HOXC9	ENST00000421157.1|RP11-31F15.2|ENSG00000238198.1|RP11-31F15.2
hg19_v2_chr12_+_48592134_48592170	0.00156533	HOXC9	ENST00000595310.1|DKFZP779L1853|ENSG00000269514.1|DKFZP779L1853
hg19_v2_chr7_-_44122063_44122139	0.00150285	HOXC9	ENST00000335195.6|POLM|ENSG00000122678.10|polymerase (DNA directed), mu 	ENST00000395831.3|POLM|ENSG00000122678.10|polymerase (DNA directed), mu 	ENST00000414235.1|POLM|ENSG00000122678.10|polymerase (DNA directed), mu 	ENST00000452049.1|POLM|ENSG00000122678.10|polymerase (DNA directed), mu 	ENST00000242248.5|POLM|ENSG00000122678.10|polymerase (DNA directed), mu
hg19_v2_chr10_-_96829246_96829259	0.00145434	HOXC9	ENST00000371270.3|CYP2C8|ENSG00000138115.9|cytochrome P450, family 2, subfamily C, polypeptide 8 	ENST00000535898.1|CYP2C8|ENSG00000138115.9|cytochrome P450, family 2, subfamily C, polypeptide 8 	ENST00000539050.1|CYP2C8|ENSG00000138115.9|cytochrome P450, family 2, subfamily C, polypeptide 8
hg19_v2_chr1_-_85100703_85100703	0.00109218	HOXC9	ENST00000370624.1|C1orf180|ENSG00000180869.3|chromosome 1 open reading frame 180
hg19_v2_chr12_+_58176525_58176601	0.000708759	HOXC9	ENST00000543727.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000540550.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000323833.8|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000350762.5|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000550559.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000548851.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000434359.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000457189.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial
