hg19_v2_chr12_+_113354341_113354422	3.86876	HOXC12_HOXD12	ENST00000553152.1|OAS1|ENSG00000089127.8|2'-5'-oligoadenylate synthetase 1, 40/46kDa
hg19_v2_chr11_-_102668879_102668898	2.51701	HOXC12_HOXD12	ENST00000315274.6|MMP1|ENSG00000196611.4|matrix metallopeptidase 1 (interstitial collagenase)
hg19_v2_chr3_-_172241250_172241297	2.2856	HOXC12_HOXD12	ENST00000420541.2|TNFSF10|ENSG00000121858.6|tumor necrosis factor (ligand) superfamily, member 10 	ENST00000241261.2|TNFSF10|ENSG00000121858.6|tumor necrosis factor (ligand) superfamily, member 10
hg19_v2_chr15_+_41245160_41245347	1.44639	HOXC12_HOXD12	ENST00000444189.2|CHAC1|ENSG00000128965.7|ChaC, cation transport regulator homolog 1 (E. coli) 	ENST00000446533.3|CHAC1|ENSG00000128965.7|ChaC, cation transport regulator homolog 1 (E. coli)
hg19_v2_chr7_+_100551239_100551256	1.14705	HOXC12_HOXD12	ENST00000319509.7|MUC3A|ENSG00000169894.13|mucin 3A, cell surface associated
hg19_v2_chr4_-_129491686_129491703	0.957709	HOXC12_HOXD12	ENST00000514265.1|RP11-184M15.1|ENSG00000248187.1|RP11-184M15.1
hg19_v2_chr6_+_19837592_19837621	0.855758	HOXC12_HOXD12	ENST00000378700.3|ID4|ENSG00000172201.6|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
hg19_v2_chr19_-_23869999_23870022	0.80719	HOXC12_HOXD12	ENST00000601935.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000359788.4|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000600313.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000596211.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000599168.1|ZNF675|ENSG00000197372.5|zinc finger protein 675
hg19_v2_chr7_-_41742697_41742714	0.803591	HOXC12_HOXD12	ENST00000242208.4|INHBA|ENSG00000122641.9|inhibin, beta A
hg19_v2_chr11_-_104480019_104480058	0.771839	HOXC12_HOXD12	ENST00000536529.1|RP11-886D15.1|ENSG00000256422.1|RP11-886D15.1	ENST00000545630.1|RP11-886D15.1|ENSG00000256422.1|RP11-886D15.1	ENST00000538641.1|RP11-886D15.1|ENSG00000256422.1|RP11-886D15.1
hg19_v2_chr4_+_70894130_70894188	0.742827	HOXC12_HOXD12	ENST00000526767.1|HTN3|ENSG00000205649.3|histatin 3 	ENST00000530128.1|HTN3|ENSG00000205649.3|histatin 3 	ENST00000381057.3|HTN3|ENSG00000205649.3|histatin 3
hg19_v2_chr9_+_137979506_137979585	0.693957	HOXC12_HOXD12	ENST00000539529.1|OLFM1|ENSG00000130558.14|olfactomedin 1 	ENST00000392991.4|OLFM1|ENSG00000130558.14|olfactomedin 1 	ENST00000371793.3|OLFM1|ENSG00000130558.14|olfactomedin 1
hg19_v2_chr1_+_15736359_15736463	0.689688	HOXC12_HOXD12	ENST00000375980.4|EFHD2|ENSG00000142634.8|EF-hand domain family, member D2
hg19_v2_chr17_+_19091325_19091329	0.673224	HOXC12_HOXD12	ENST00000584923.1|SNORD3A|ENSG00000263934.2|small nucleolar RNA, C/D box 3A
hg19_v2_chr19_+_7011509_7011526	0.67267	HOXC12_HOXD12	ENST00000377296.3|AC025278.1|ENSG00000204752.3|Uncharacterized protein
hg19_v2_chr6_+_126221034_126221056	0.653853	HOXC12_HOXD12	ENST00000433571.1|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7
hg19_v2_chr5_+_169011033_169011108	0.640945	HOXC12_HOXD12	ENST00000513795.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1
hg19_v2_chr6_+_32812568_32812631	0.63297	HOXC12_HOXD12	ENST00000414474.1|PSMB9|ENSG00000240065.3|proteasome (prosome, macropain) subunit, beta type, 9
hg19_v2_chr7_+_76101379_76101379	0.613587	HOXC12_HOXD12	ENST00000429179.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila)
hg19_v2_chr12_+_75874460_75874549	0.605317	HOXC12_HOXD12	ENST00000266659.3|GLIPR1|ENSG00000139278.5|GLI pathogenesis-related 1
hg19_v2_chr22_-_36925186_36925231	0.579545	HOXC12_HOXD12	ENST00000541106.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D 	ENST00000455547.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D 	ENST00000432675.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D
hg19_v2_chr22_+_22723969_22723985	0.559258	HOXC12_HOXD12	ENST00000390295.2|IGLV7-46|ENSG00000211649.2|immunoglobulin lambda variable 7-46 (gene/pseudogene)
hg19_v2_chr2_+_131769256_131769328	0.551277	HOXC12_HOXD12	ENST00000355771.3|ARHGEF4|ENSG00000136002.12|Rho guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr11_-_77705687_77705745	0.543178	HOXC12_HOXD12	ENST00000529807.1|INTS4|ENSG00000149262.12|integrator complex subunit 4 	ENST00000527522.1|INTS4|ENSG00000149262.12|integrator complex subunit 4 	ENST00000534064.1|INTS4|ENSG00000149262.12|integrator complex subunit 4
hg19_v2_chr5_-_39270725_39270771	0.528131	HOXC12_HOXD12	ENST00000512138.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000512982.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000540520.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr7_+_116595028_116595028	0.489091	HOXC12_HOXD12	ENST00000397751.1|ST7-OT4|ENSG00000214188.5|ST7 overlapping transcript 4
hg19_v2_chr12_-_10007448_10007448	0.487226	HOXC12_HOXD12	ENST00000538152.1|CLEC2B|ENSG00000110852.4|C-type lectin domain family 2, member B
hg19_v2_chr22_+_22676808_22676828	0.47893	HOXC12_HOXD12	ENST00000390290.2|IGLV1-51|ENSG00000211644.2|immunoglobulin lambda variable 1-51
hg19_v2_chr22_-_36924944_36925044	0.476083	HOXC12_HOXD12	ENST00000405442.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D 	ENST00000402116.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D
hg19_v2_chr9_-_73029540_73029540	0.467418	HOXC12_HOXD12	ENST00000377126.2|KLF9|ENSG00000119138.3|Kruppel-like factor 9
hg19_v2_chr7_-_27219849_27219880	0.452653	HOXC12_HOXD12	ENST00000396344.4|HOXA10|ENSG00000253293.3|homeobox A10
hg19_v2_chr5_+_169010638_169010799	0.414882	HOXC12_HOXD12	ENST00000265295.4|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000506574.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000515224.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000508247.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000513941.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1
hg19_v2_chr4_-_76957214_76957350	0.405239	HOXC12_HOXD12	ENST00000306621.3|CXCL11|ENSG00000169248.8|chemokine (C-X-C motif) ligand 11
hg19_v2_chr19_-_47987419_47987525	0.405104	HOXC12_HOXD12	ENST00000536339.1|KPTN|ENSG00000118162.9|kaptin (actin binding protein) 	ENST00000595554.1|KPTN|ENSG00000118162.9|kaptin (actin binding protein) 	ENST00000600271.1|KPTN|ENSG00000118162.9|kaptin (actin binding protein) 	ENST00000338134.3|KPTN|ENSG00000118162.9|kaptin (actin binding protein)
hg19_v2_chr17_-_15496722_15496722	0.391708	HOXC12_HOXD12	ENST00000472534.1|CDRT1|ENSG00000241322.4|CMT1A duplicated region transcript 1
hg19_v2_chr1_+_158975744_158975769	0.370862	HOXC12_HOXD12	ENST00000426592.2|IFI16|ENSG00000163565.14|interferon, gamma-inducible protein 16
hg19_v2_chr20_-_30311703_30311792	0.369922	HOXC12_HOXD12	ENST00000450273.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000456404.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000420488.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000439267.1|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr4_-_156787425_156787429	0.362609	HOXC12_HOXD12	ENST00000537611.2|ASIC5|ENSG00000256394.2|acid-sensing (proton-gated) ion channel family member 5
hg19_v2_chr10_-_106098162_106098181	0.360577	HOXC12_HOXD12	ENST00000337478.1|ITPRIP|ENSG00000148841.11|inositol 1,4,5-trisphosphate receptor interacting protein
hg19_v2_chr3_+_72201910_72202085	0.360195	HOXC12_HOXD12	ENST00000469178.1|LINC00870|ENSG00000243083.1|long intergenic non-protein coding RNA 870 	ENST00000485404.1|LINC00870|ENSG00000243083.1|long intergenic non-protein coding RNA 870
hg19_v2_chr21_+_46359907_46359962	0.354272	HOXC12_HOXD12	ENST00000291634.6|FAM207A|ENSG00000160256.8|family with sequence similarity 207, member A 	ENST00000397826.3|FAM207A|ENSG00000160256.8|family with sequence similarity 207, member A 	ENST00000458015.1|FAM207A|ENSG00000160256.8|family with sequence similarity 207, member A
hg19_v2_chrX_-_133792480_133792522	0.350271	HOXC12_HOXD12	ENST00000359237.4|PLAC1|ENSG00000170965.5|placenta-specific 1
hg19_v2_chr22_-_36925124_36925173	0.342764	HOXC12_HOXD12	ENST00000457241.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D
hg19_v2_chr8_-_36636676_36636688	0.336752	HOXC12_HOXD12	ENST00000524132.1|RP11-962G15.1|ENSG00000253363.1|RP11-962G15.1	ENST00000519451.1|RP11-962G15.1|ENSG00000253363.1|RP11-962G15.1
hg19_v2_chr19_+_44331555_44331581	0.333705	HOXC12_HOXD12	ENST00000590950.1|ZNF283|ENSG00000167637.12|zinc finger protein 283
hg19_v2_chr17_+_7517264_7517382	0.326172	HOXC12_HOXD12	ENST00000593717.1|AC007421.1|ENSG00000268503.1|AC007421.1	ENST00000572182.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000574539.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000576728.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000575314.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000570547.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000572262.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000576478.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin
hg19_v2_chr1_-_156307992_156308013	0.325814	HOXC12_HOXD12	ENST00000415548.1|CCT3|ENSG00000163468.10|chaperonin containing TCP1, subunit 3 (gamma)
hg19_v2_chr2_+_169926047_169926086	0.317967	HOXC12_HOXD12	ENST00000428522.1|DHRS9|ENSG00000073737.12|dehydrogenase/reductase (SDR family) member 9 	ENST00000450153.1|DHRS9|ENSG00000073737.12|dehydrogenase/reductase (SDR family) member 9 	ENST00000421653.1|DHRS9|ENSG00000073737.12|dehydrogenase/reductase (SDR family) member 9
hg19_v2_chr14_-_25479811_25479846	0.313444	HOXC12_HOXD12	ENST00000550887.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn)
hg19_v2_chr15_+_75639372_75639427	0.312761	HOXC12_HOXD12	ENST00000566313.1|NEIL1|ENSG00000140398.9|nei endonuclease VIII-like 1 (E. coli) 	ENST00000568059.1|NEIL1|ENSG00000140398.9|nei endonuclease VIII-like 1 (E. coli) 	ENST00000568881.1|NEIL1|ENSG00000140398.9|nei endonuclease VIII-like 1 (E. coli)
hg19_v2_chr2_-_152146385_152146571	0.312518	HOXC12_HOXD12	ENST00000414946.1|NMI|ENSG00000123609.6|N-myc (and STAT) interactor 	ENST00000243346.5|NMI|ENSG00000123609.6|N-myc (and STAT) interactor
hg19_v2_chr1_+_156308403_156308693	0.310611	HOXC12_HOXD12	ENST00000481479.1|TSACC|ENSG00000163467.7|TSSK6 activating co-chaperone 	ENST00000368252.1|TSACC|ENSG00000163467.7|TSSK6 activating co-chaperone 	ENST00000466306.1|TSACC|ENSG00000163467.7|TSSK6 activating co-chaperone 	ENST00000368251.1|TSACC|ENSG00000163467.7|TSSK6 activating co-chaperone
hg19_v2_chr6_-_112081113_112081154	0.304357	HOXC12_HOXD12	ENST00000517419.1|FYN|ENSG00000010810.13|FYN oncogene related to SRC, FGR, YES
hg19_v2_chr14_+_73634537_73634556	0.297666	HOXC12_HOXD12	ENST00000406768.1|PSEN1|ENSG00000080815.14|presenilin 1
hg19_v2_chr18_-_19283649_19283830	0.295378	HOXC12_HOXD12	ENST00000584464.1|ABHD3|ENSG00000158201.5|abhydrolase domain containing 3 	ENST00000578270.1|ABHD3|ENSG00000158201.5|abhydrolase domain containing 3
hg19_v2_chr5_-_43397184_43397366	0.293026	HOXC12_HOXD12	ENST00000513525.1|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28
hg19_v2_chr19_-_11457162_11457194	0.289705	HOXC12_HOXD12	ENST00000590482.1|TMEM205|ENSG00000105518.9|transmembrane protein 205
hg19_v2_chr18_+_70536215_70536275	0.287252	HOXC12_HOXD12	ENST00000578967.1|RP11-676J15.1|ENSG00000263958.1|RP11-676J15.1
hg19_v2_chr19_-_12267524_12267564	0.28075	HOXC12_HOXD12	ENST00000455799.1|ZNF625|ENSG00000257591.1|zinc finger protein 625 	ENST00000355738.1|ZNF625|ENSG00000257591.1|zinc finger protein 625 	ENST00000439556.2|ZNF625|ENSG00000257591.1|zinc finger protein 625 	ENST00000542938.1|ZNF625|ENSG00000257591.1|zinc finger protein 625
hg19_v2_chr7_+_76090993_76091044	0.278677	HOXC12_HOXD12	ENST00000425780.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000456590.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000451769.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000324432.5|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000307569.8|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000457529.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000446600.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000413936.2|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000423646.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000438930.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000430490.2|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila)
hg19_v2_chr12_-_30887948_30887997	0.277197	HOXC12_HOXD12	ENST00000433722.2|CAPRIN2|ENSG00000110888.13|caprin family member 2
hg19_v2_chr8_-_42065075_42065090	0.276862	HOXC12_HOXD12	ENST00000429089.2|PLAT|ENSG00000104368.13|plasminogen activator, tissue 	ENST00000519510.1|PLAT|ENSG00000104368.13|plasminogen activator, tissue 	ENST00000429710.2|PLAT|ENSG00000104368.13|plasminogen activator, tissue 	ENST00000524009.1|PLAT|ENSG00000104368.13|plasminogen activator, tissue
hg19_v2_chr6_+_106988986_106989037	0.275759	HOXC12_HOXD12	ENST00000457437.1|AIM1|ENSG00000112297.10|absent in melanoma 1 	ENST00000535438.1|AIM1|ENSG00000112297.10|absent in melanoma 1
hg19_v2_chr1_-_246670519_246670611	0.274338	HOXC12_HOXD12	ENST00000388985.4|SMYD3|ENSG00000185420.14|SET and MYND domain containing 3 	ENST00000490107.1|SMYD3|ENSG00000185420.14|SET and MYND domain containing 3
hg19_v2_chr4_-_120243545_120243562	0.272185	HOXC12_HOXD12	ENST00000274024.3|FABP2|ENSG00000145384.3|fatty acid binding protein 2, intestinal
hg19_v2_chr2_-_225811747_225811796	0.271106	HOXC12_HOXD12	ENST00000409592.3|DOCK10|ENSG00000135905.14|dedicator of cytokinesis 10
hg19_v2_chr1_+_19967014_19967048	0.270794	HOXC12_HOXD12	ENST00000428975.1|NBL1|ENSG00000158747.9|neuroblastoma 1, DAN family BMP antagonist
hg19_v2_chr1_+_156308245_156308393	0.268243	HOXC12_HOXD12	ENST00000368253.2|TSACC|ENSG00000163467.7|TSSK6 activating co-chaperone 	ENST00000470342.1|TSACC|ENSG00000163467.7|TSSK6 activating co-chaperone 	ENST00000368254.1|TSACC|ENSG00000163467.7|TSSK6 activating co-chaperone
hg19_v2_chr11_+_127140956_127140979	0.267643	HOXC12_HOXD12	ENST00000608214.1|RP11-480C22.1|ENSG00000273409.1|RP11-480C22.1
hg19_v2_chr17_-_66951474_66951550	0.267273	HOXC12_HOXD12	ENST00000269080.2|ABCA8|ENSG00000141338.9|ATP-binding cassette, sub-family A (ABC1), member 8
hg19_v2_chr1_+_178694300_178694346	0.265447	HOXC12_HOXD12	ENST00000367635.3|RALGPS2|ENSG00000116191.13|Ral GEF with PH domain and SH3 binding motif 2
hg19_v2_chr15_+_101459420_101459585	0.264118	HOXC12_HOXD12	ENST00000388948.3|LRRK1|ENSG00000154237.8|leucine-rich repeat kinase 1 	ENST00000284395.5|LRRK1|ENSG00000154237.8|leucine-rich repeat kinase 1 	ENST00000534045.1|LRRK1|ENSG00000154237.8|leucine-rich repeat kinase 1 	ENST00000532029.2|LRRK1|ENSG00000154237.8|leucine-rich repeat kinase 1
hg19_v2_chr8_-_42065187_42065242	0.263977	HOXC12_HOXD12	ENST00000270189.6|PLAT|ENSG00000104368.13|plasminogen activator, tissue 	ENST00000352041.3|PLAT|ENSG00000104368.13|plasminogen activator, tissue 	ENST00000220809.4|PLAT|ENSG00000104368.13|plasminogen activator, tissue
hg19_v2_chr19_-_55677999_55678026	0.262843	HOXC12_HOXD12	ENST00000532817.1|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3 	ENST00000527223.2|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3 	ENST00000391720.4|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3
hg19_v2_chr11_+_110001723_110001732	0.260106	HOXC12_HOXD12	ENST00000528673.1|ZC3H12C|ENSG00000149289.6|zinc finger CCCH-type containing 12C
hg19_v2_chr19_-_11456935_11457003	0.256774	HOXC12_HOXD12	ENST00000590788.1|TMEM205|ENSG00000105518.9|transmembrane protein 205 	ENST00000586590.1|TMEM205|ENSG00000105518.9|transmembrane protein 205 	ENST00000589655.1|RAB3D|ENSG00000105514.3|RAB3D, member RAS oncogene family 	ENST00000589555.1|TMEM205|ENSG00000105518.9|transmembrane protein 205 	ENST00000586956.1|TMEM205|ENSG00000105518.9|transmembrane protein 205 	ENST00000593256.2|TMEM205|ENSG00000105518.9|transmembrane protein 205 	ENST00000447337.1|TMEM205|ENSG00000105518.9|transmembrane protein 205 	ENST00000591677.1|TMEM205|ENSG00000105518.9|transmembrane protein 205 	ENST00000586701.1|TMEM205|ENSG00000105518.9|transmembrane protein 205
hg19_v2_chr13_+_49551020_49551097	0.25645	HOXC12_HOXD12	ENST00000541916.1|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr15_+_79166065_79166163	0.25617	HOXC12_HOXD12	ENST00000559690.1|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1 	ENST00000559158.1|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1
hg19_v2_chr19_-_11456722_11456853	0.25427	HOXC12_HOXD12	ENST00000354882.5|TMEM205|ENSG00000105518.9|transmembrane protein 205
hg19_v2_chr19_+_18668572_18668608	0.25367	HOXC12_HOXD12	ENST00000540691.1|KXD1|ENSG00000105700.6|KxDL motif containing 1 	ENST00000539106.1|KXD1|ENSG00000105700.6|KxDL motif containing 1 	ENST00000222307.4|KXD1|ENSG00000105700.6|KxDL motif containing 1
hg19_v2_chr20_-_44540686_44540804	0.251667	HOXC12_HOXD12	ENST00000477313.1|PLTP|ENSG00000100979.10|phospholipid transfer protein 	ENST00000542937.1|PLTP|ENSG00000100979.10|phospholipid transfer protein 	ENST00000372431.3|PLTP|ENSG00000100979.10|phospholipid transfer protein 	ENST00000354050.4|PLTP|ENSG00000100979.10|phospholipid transfer protein 	ENST00000420868.2|PLTP|ENSG00000100979.10|phospholipid transfer protein
hg19_v2_chr14_-_82089405_82089428	0.249833	HOXC12_HOXD12	ENST00000554211.1|RP11-799P8.1|ENSG00000258977.1|RP11-799P8.1
hg19_v2_chr2_-_136875712_136875735	0.245813	HOXC12_HOXD12	ENST00000241393.3|CXCR4|ENSG00000121966.6|chemokine (C-X-C motif) receptor 4
hg19_v2_chr19_-_11457082_11457109	0.245184	HOXC12_HOXD12	ENST00000587948.1|TMEM205|ENSG00000105518.9|transmembrane protein 205
hg19_v2_chr1_+_199996733_199996781	0.236862	HOXC12_HOXD12	ENST00000236914.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr4_+_56814968_56815037	0.234338	HOXC12_HOXD12	ENST00000422247.2|CEP135|ENSG00000174799.6|centrosomal protein 135kDa
hg19_v2_chr7_-_3214287_3214287	0.233783	HOXC12_HOXD12	ENST00000404626.3|AC091801.1|ENSG00000217455.4|LOC392621; Uncharacterized protein
hg19_v2_chr1_-_161015752_161015778	0.227607	HOXC12_HOXD12	ENST00000435396.1|USF1|ENSG00000158773.10|upstream transcription factor 1 	ENST00000368021.3|USF1|ENSG00000158773.10|upstream transcription factor 1
hg19_v2_chr2_-_228497888_228498036	0.226846	HOXC12_HOXD12	ENST00000264387.4|C2orf83|ENSG00000042304.6|chromosome 2 open reading frame 83 	ENST00000409066.1|C2orf83|ENSG00000042304.6|chromosome 2 open reading frame 83
hg19_v2_chr1_-_156308018_156308101	0.226006	HOXC12_HOXD12	ENST00000496684.2|CCT3|ENSG00000163468.10|chaperonin containing TCP1, subunit 3 (gamma) 	ENST00000368259.2|CCT3|ENSG00000163468.10|chaperonin containing TCP1, subunit 3 (gamma) 	ENST00000368261.3|CCT3|ENSG00000163468.10|chaperonin containing TCP1, subunit 3 (gamma) 	ENST00000472765.2|CCT3|ENSG00000163468.10|chaperonin containing TCP1, subunit 3 (gamma) 	ENST00000533194.1|CCT3|ENSG00000163468.10|chaperonin containing TCP1, subunit 3 (gamma) 	ENST00000478640.2|CCT3|ENSG00000163468.10|chaperonin containing TCP1, subunit 3 (gamma)
hg19_v2_chr18_+_616672_616681	0.22404	HOXC12_HOXD12	ENST00000338387.7|CLUL1|ENSG00000079101.12|clusterin-like 1 (retinal)
hg19_v2_chr19_-_22018966_22019010	0.221315	HOXC12_HOXD12	ENST00000599906.1|ZNF43|ENSG00000198521.7|zinc finger protein 43 	ENST00000354959.4|ZNF43|ENSG00000198521.7|zinc finger protein 43
hg19_v2_chr22_-_32766972_32766996	0.21953	HOXC12_HOXD12	ENST00000382084.4|RFPL3S|ENSG00000205853.6|RFPL3 antisense 	ENST00000382086.2|RFPL3S|ENSG00000205853.6|RFPL3 antisense
hg19_v2_chr19_-_11456872_11456896	0.219199	HOXC12_HOXD12	ENST00000586218.1|TMEM205|ENSG00000105518.9|transmembrane protein 205
hg19_v2_chr9_-_130889990_130890038	0.218994	HOXC12_HOXD12	ENST00000449878.1|PTGES2|ENSG00000148334.10|prostaglandin E synthase 2
hg19_v2_chr12_+_27623565_27623565	0.214228	HOXC12_HOXD12	ENST00000535986.1|SMCO2|ENSG00000165935.5|single-pass membrane protein with coiled-coil domains 2
hg19_v2_chr7_+_137761167_137761191	0.214144	HOXC12_HOXD12	ENST00000432161.1|AKR1D1|ENSG00000122787.10|aldo-keto reductase family 1, member D1
hg19_v2_chr8_-_52721975_52722011	0.213171	HOXC12_HOXD12	ENST00000356297.4|PXDNL|ENSG00000147485.8|peroxidasin homolog (Drosophila)-like 	ENST00000543296.1|PXDNL|ENSG00000147485.8|peroxidasin homolog (Drosophila)-like
hg19_v2_chr5_-_65018834_65018863	0.212874	HOXC12_HOXD12	ENST00000506816.1|SGTB|ENSG00000197860.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
hg19_v2_chr15_+_57891609_57891704	0.211508	HOXC12_HOXD12	ENST00000569089.1|MYZAP|ENSG00000263155.1|myocardial zonula adherens protein
hg19_v2_chr2_+_201450591_201450680	0.206628	HOXC12_HOXD12	ENST00000374700.2|AOX1|ENSG00000138356.9|aldehyde oxidase 1
hg19_v2_chr11_-_107729287_107729310	0.206214	HOXC12_HOXD12	ENST00000375682.4|SLC35F2|ENSG00000110660.10|solute carrier family 35, member F2
hg19_v2_chr7_+_35756186_35756202	0.205369	HOXC12_HOXD12	ENST00000430518.1|AC018647.3|ENSG00000227544.4|AC018647.3
hg19_v2_chr14_-_77889860_77889878	0.203917	HOXC12_HOXD12	ENST00000555603.1|NOXRED1|ENSG00000165555.5|NADP-dependent oxidoreductase domain containing 1
hg19_v2_chr4_+_47487285_47487366	0.203274	HOXC12_HOXD12	ENST00000273859.3|ATP10D|ENSG00000145246.9|ATPase, class V, type 10D 	ENST00000504445.1|ATP10D|ENSG00000145246.9|ATPase, class V, type 10D
hg19_v2_chr1_-_78444776_78444800	0.202629	HOXC12_HOXD12	ENST00000370767.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1 	ENST00000421641.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1
hg19_v2_chr14_-_24701539_24701660	0.202309	HOXC12_HOXD12	ENST00000534348.1|NEDD8-MDP1|ENSG00000255526.2|NEDD8-MDP1 readthrough 	ENST00000524927.1|NEDD8|ENSG00000129559.8|neural precursor cell expressed, developmentally down-regulated 8 	ENST00000250495.5|NEDD8|ENSG00000129559.8|neural precursor cell expressed, developmentally down-regulated 8
hg19_v2_chr6_+_34725181_34725195	0.202211	HOXC12_HOXD12	ENST00000244520.5|SNRPC|ENSG00000124562.5|small nuclear ribonucleoprotein polypeptide C
hg19_v2_chr9_+_134065506_134065509	0.200025	HOXC12_HOXD12	ENST00000483497.2|NUP214|ENSG00000126883.12|nucleoporin 214kDa
hg19_v2_chr9_-_4299874_4299916	0.199997	HOXC12_HOXD12	ENST00000381971.3|GLIS3|ENSG00000107249.17|GLIS family zinc finger 3 	ENST00000477901.1|GLIS3|ENSG00000107249.17|GLIS family zinc finger 3
hg19_v2_chr17_-_8286484_8286531	0.199038	HOXC12_HOXD12	ENST00000582556.1|RPL26|ENSG00000161970.8|ribosomal protein L26 	ENST00000584164.1|RPL26|ENSG00000161970.8|ribosomal protein L26 	ENST00000293842.5|RPL26|ENSG00000161970.8|ribosomal protein L26 	ENST00000584343.1|RPL26|ENSG00000161970.8|ribosomal protein L26 	ENST00000578812.1|RPL26|ENSG00000161970.8|ribosomal protein L26 	ENST00000583011.1|RPL26|ENSG00000161970.8|ribosomal protein L26
hg19_v2_chr21_-_27423339_27423352	0.198965	HOXC12_HOXD12	ENST00000415997.1|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr17_-_42767092_42767103	0.198901	HOXC12_HOXD12	ENST00000588687.1|CCDC43|ENSG00000180329.9|coiled-coil domain containing 43
hg19_v2_chr13_+_111855399_111855413	0.197108	HOXC12_HOXD12	ENST00000426768.2|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chr8_-_144699668_144699737	0.195917	HOXC12_HOXD12	ENST00000425753.2|TSTA3|ENSG00000104522.11|tissue specific transplantation antigen P35B
hg19_v2_chr6_-_56716686_56716749	0.195192	HOXC12_HOXD12	ENST00000520645.1|DST|ENSG00000151914.13|dystonin
hg19_v2_chr17_+_46184911_46184951	0.192405	HOXC12_HOXD12	ENST00000580219.1|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000452859.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000393405.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000439357.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000359238.2|SNX11|ENSG00000002919.10|sorting nexin 11
hg19_v2_chr19_+_21264943_21264965	0.192313	HOXC12_HOXD12	ENST00000597424.1|ZNF714|ENSG00000160352.11|zinc finger protein 714
hg19_v2_chr17_-_34890759_34890815	0.187522	HOXC12_HOXD12	ENST00000431794.3|MYO19|ENSG00000141140.12|myosin XIX
hg19_v2_chr5_+_159656437_159656517	0.186643	HOXC12_HOXD12	ENST00000402432.3|FABP6|ENSG00000170231.11|fatty acid binding protein 6, ileal
hg19_v2_chr10_+_24738355_24738380	0.185481	HOXC12_HOXD12	ENST00000307544.6|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr16_+_20911174_20911242	0.184382	HOXC12_HOXD12	ENST00000568663.1|LYRM1|ENSG00000102897.5|LYR motif containing 1
hg19_v2_chr6_+_30539153_30539255	0.18416	HOXC12_HOXD12	ENST00000326195.8|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000376545.3|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000396515.4|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000441867.1|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000468958.1|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1
hg19_v2_chr8_+_1993152_1993168	0.183349	HOXC12_HOXD12	ENST00000262113.4|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr2_-_136873735_136873813	0.183011	HOXC12_HOXD12	ENST00000409817.1|CXCR4|ENSG00000121966.6|chemokine (C-X-C motif) receptor 4
hg19_v2_chr22_+_39916558_39916579	0.182447	HOXC12_HOXD12	ENST00000337304.2|ATF4|ENSG00000128272.10|activating transcription factor 4 	ENST00000396680.1|ATF4|ENSG00000128272.10|activating transcription factor 4
hg19_v2_chr6_+_26199737_26199754	0.181994	HOXC12_HOXD12	ENST00000359985.1|HIST1H2BF|ENSG00000197846.3|histone cluster 1, H2bf
hg19_v2_chr18_+_72167096_72167133	0.18175	HOXC12_HOXD12	ENST00000324301.8|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family)
hg19_v2_chr19_+_18668672_18668708	0.180344	HOXC12_HOXD12	ENST00000601630.1|KXD1|ENSG00000105700.6|KxDL motif containing 1 	ENST00000599000.1|KXD1|ENSG00000105700.6|KxDL motif containing 1 	ENST00000595073.1|KXD1|ENSG00000105700.6|KxDL motif containing 1 	ENST00000596785.1|KXD1|ENSG00000105700.6|KxDL motif containing 1
hg19_v2_chr1_-_23886285_23886336	0.180259	HOXC12_HOXD12	ENST00000374561.5|ID3|ENSG00000117318.8|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg19_v2_chr12_+_59989918_59989965	0.180076	HOXC12_HOXD12	ENST00000547379.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000549465.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr7_-_72992663_72992722	0.178581	HOXC12_HOXD12	ENST00000432538.1|TBL2|ENSG00000106638.11|transducin (beta)-like 2
hg19_v2_chr1_+_200993071_200993094	0.177568	HOXC12_HOXD12	ENST00000446333.1|RP11-168O16.1|ENSG00000229191.1|RP11-168O16.1	ENST00000458003.1|RP11-168O16.1|ENSG00000229191.1|RP11-168O16.1
hg19_v2_chr5_-_180670370_180670382	0.176009	HOXC12_HOXD12	ENST00000502844.1|GNB2L1|ENSG00000204628.7|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
hg19_v2_chr19_+_37341752_37341816	0.175705	HOXC12_HOXD12	ENST00000586933.1|ZNF345|ENSG00000251247.5|zinc finger protein 345 	ENST00000532141.1|ZNF345|ENSG00000251247.5|zinc finger protein 345 	ENST00000420450.1|ZNF345|ENSG00000251247.5|zinc finger protein 345 	ENST00000526123.1|ZNF345|ENSG00000251247.5|zinc finger protein 345
hg19_v2_chr19_-_11456905_11456931	0.173773	HOXC12_HOXD12	ENST00000588560.1|TMEM205|ENSG00000105518.9|transmembrane protein 205 	ENST00000592952.1|TMEM205|ENSG00000105518.9|transmembrane protein 205
hg19_v2_chr5_-_146833485_146833522	0.172864	HOXC12_HOXD12	ENST00000398514.3|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr19_-_45996465_45996525	0.172529	HOXC12_HOXD12	ENST00000430715.2|RTN2|ENSG00000125744.7|reticulon 2
hg19_v2_chr10_-_51958906_51958906	0.170626	HOXC12_HOXD12	ENST00000489640.1|ASAH2|ENSG00000188611.10|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
hg19_v2_chr1_-_146989697_146989701	0.170544	HOXC12_HOXD12	ENST00000437831.1|LINC00624|ENSG00000234610.1|long intergenic non-protein coding RNA 624
hg19_v2_chrX_-_15619076_15619137	0.170416	HOXC12_HOXD12	ENST00000252519.3|ACE2|ENSG00000130234.6|angiotensin I converting enzyme 2
hg19_v2_chr4_+_146539415_146539415	0.17001	HOXC12_HOXD12	ENST00000281317.5|MMAA|ENSG00000151611.9|methylmalonic aciduria (cobalamin deficiency) cblA type
hg19_v2_chr5_-_146833222_146833261	0.169033	HOXC12_HOXD12	ENST00000534907.1|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr19_-_39523165_39523236	0.16828	HOXC12_HOXD12	ENST00000509137.2|FBXO27|ENSG00000161243.4|F-box protein 27 	ENST00000292853.4|FBXO27|ENSG00000161243.4|F-box protein 27
hg19_v2_chr17_-_42976736_42976827	0.165108	HOXC12_HOXD12	ENST00000591382.1|EFTUD2|ENSG00000108883.8|elongation factor Tu GTP binding domain containing 2 	ENST00000593072.1|EFTUD2|ENSG00000108883.8|elongation factor Tu GTP binding domain containing 2 	ENST00000592576.1|EFTUD2|ENSG00000108883.8|elongation factor Tu GTP binding domain containing 2 	ENST00000402521.3|EFTUD2|ENSG00000108883.8|elongation factor Tu GTP binding domain containing 2
hg19_v2_chr17_-_34890732_34890754	0.16487	HOXC12_HOXD12	ENST00000268852.9|MYO19|ENSG00000141140.12|myosin XIX
hg19_v2_chr1_+_151253991_151254094	0.164141	HOXC12_HOXD12	ENST00000443959.1|ZNF687|ENSG00000143373.13|zinc finger protein 687
hg19_v2_chr12_+_54384370_54384408	0.16373	HOXC12_HOXD12	ENST00000504315.1|HOXC6|ENSG00000197757.7|homeobox C6
hg19_v2_chr1_+_92545862_92545917	0.163029	HOXC12_HOXD12	ENST00000370382.3|BTBD8|ENSG00000189195.5|BTB (POZ) domain containing 8 	ENST00000342818.3|BTBD8|ENSG00000189195.5|BTB (POZ) domain containing 8
hg19_v2_chr5_+_93954358_93954406	0.163027	HOXC12_HOXD12	ENST00000504099.1|ANKRD32|ENSG00000133302.8|ankyrin repeat domain 32
hg19_v2_chr2_+_20866424_20866424	0.162619	HOXC12_HOXD12	ENST00000272224.3|GDF7|ENSG00000143869.5|growth differentiation factor 7
hg19_v2_chr1_-_15735925_15735938	0.161857	HOXC12_HOXD12	ENST00000427824.1|RP3-467K16.4|ENSG00000228140.1|RP3-467K16.4
hg19_v2_chr15_-_72514866_72514888	0.161315	HOXC12_HOXD12	ENST00000562997.1|PKM|ENSG00000067225.13|pyruvate kinase, muscle
hg19_v2_chr15_-_71184724_71184778	0.160773	HOXC12_HOXD12	ENST00000560604.1|THAP10|ENSG00000129028.4|THAP domain containing 10
hg19_v2_chr8_-_38008783_38008783	0.159443	HOXC12_HOXD12	ENST00000276449.4|STAR|ENSG00000147465.7|steroidogenic acute regulatory protein
hg19_v2_chr11_-_107729504_107729539	0.158693	HOXC12_HOXD12	ENST00000265836.7|SLC35F2|ENSG00000110660.10|solute carrier family 35, member F2
hg19_v2_chrY_+_2709527_2709653	0.156246	HOXC12_HOXD12	ENST00000250784.8|RPS4Y1|ENSG00000129824.11|ribosomal protein S4, Y-linked 1
hg19_v2_chr19_+_16940198_16940237	0.156023	HOXC12_HOXD12	ENST00000248054.5|SIN3B|ENSG00000127511.5|SIN3 transcription regulator family member B 	ENST00000596802.1|SIN3B|ENSG00000127511.5|SIN3 transcription regulator family member B 	ENST00000379803.1|SIN3B|ENSG00000127511.5|SIN3 transcription regulator family member B
hg19_v2_chr3_-_138763734_138763734	0.150742	HOXC12_HOXD12	ENST00000413199.1|PRR23C|ENSG00000233701.2|proline rich 23C 	ENST00000502927.2|PRR23C|ENSG00000233701.2|proline rich 23C
hg19_v2_chr17_+_37617721_37617773	0.15032	HOXC12_HOXD12	ENST00000584632.1|CDK12|ENSG00000167258.9|cyclin-dependent kinase 12
hg19_v2_chr12_-_66524482_66524548	0.149752	HOXC12_HOXD12	ENST00000446587.2|LLPH|ENSG00000139233.2|LLP homolog, long-term synaptic facilitation (Aplysia) 	ENST00000266604.2|LLPH|ENSG00000139233.2|LLP homolog, long-term synaptic facilitation (Aplysia)
hg19_v2_chr11_-_9336117_9336196	0.148053	HOXC12_HOXD12	ENST00000527813.1|TMEM41B|ENSG00000166471.6|transmembrane protein 41B 	ENST00000533723.1|TMEM41B|ENSG00000166471.6|transmembrane protein 41B
hg19_v2_chr4_-_184241927_184241927	0.147353	HOXC12_HOXD12	ENST00000323319.5|CLDN22|ENSG00000177300.5|claudin 22
hg19_v2_chr12_+_58087738_58087891	0.147069	HOXC12_HOXD12	ENST00000552285.1|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin
hg19_v2_chr8_+_1993173_1993199	0.147014	HOXC12_HOXD12	ENST00000523438.1|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr4_-_123843597_123843766	0.146159	HOXC12_HOXD12	ENST00000510735.1|NUDT6|ENSG00000170917.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6 	ENST00000304430.5|NUDT6|ENSG00000170917.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6
hg19_v2_chr13_-_30160925_30160931	0.145719	HOXC12_HOXD12	ENST00000450494.1|SLC7A1|ENSG00000139514.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg19_v2_chr6_-_10694766_10694876	0.144941	HOXC12_HOXD12	ENST00000460742.2|C6orf52|ENSG00000137434.7|chromosome 6 open reading frame 52 	ENST00000259983.3|C6orf52|ENSG00000137434.7|chromosome 6 open reading frame 52 	ENST00000379586.1|C6orf52|ENSG00000137434.7|chromosome 6 open reading frame 52
hg19_v2_chr9_+_131062367_131062367	0.143823	HOXC12_HOXD12	ENST00000601297.1|AL359091.2|ENSG00000268211.1|CDNA: FLJ21673 fis, clone COL09042; HCG2036511; Uncharacterized protein
hg19_v2_chr21_-_33984456_33984726	0.143381	HOXC12_HOXD12	ENST00000431216.1|AP000275.65|ENSG00000265590.5|Uncharacterized protein  	ENST00000553001.1|AP000275.65|ENSG00000265590.5|Uncharacterized protein  	ENST00000440966.1|C21orf59|ENSG00000159079.14|chromosome 21 open reading frame 59
hg19_v2_chr6_-_51952367_51952416	0.142885	HOXC12_HOXD12	ENST00000340994.4|PKHD1|ENSG00000170927.10|polycystic kidney and hepatic disease 1 (autosomal recessive)
hg19_v2_chr16_-_3450963_3451065	0.1416	HOXC12_HOXD12	ENST00000573327.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000571906.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000573830.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000439568.2|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000422427.2|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000304926.3|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000396852.4|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32
hg19_v2_chr3_+_4535025_4535040	0.140803	HOXC12_HOXD12	ENST00000302640.8|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000354582.6|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000423119.2|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000357086.4|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000456211.2|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1
hg19_v2_chr7_+_138818490_138818541	0.138973	HOXC12_HOXD12	ENST00000430935.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000495038.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000474035.2|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000478836.2|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000464848.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000343187.4|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26
hg19_v2_chr19_+_2785458_2785548	0.137982	HOXC12_HOXD12	ENST00000307741.6|THOP1|ENSG00000172009.10|thimet oligopeptidase 1 	ENST00000585338.1|THOP1|ENSG00000172009.10|thimet oligopeptidase 1
hg19_v2_chr3_+_41241596_41241612	0.137949	HOXC12_HOXD12	ENST00000450969.1|CTNNB1|ENSG00000168036.12|catenin (cadherin-associated protein), beta 1, 88kDa
hg19_v2_chr12_+_104697504_104697585	0.13702	HOXC12_HOXD12	ENST00000527879.1|EID3|ENSG00000255150.1|EP300 interacting inhibitor of differentiation 3
hg19_v2_chr17_-_71228357_71228533	0.136384	HOXC12_HOXD12	ENST00000583024.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000403627.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000405159.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000581110.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chr5_+_8839844_8839877	0.136366	HOXC12_HOXD12	ENST00000510229.1|RP11-143A12.3|ENSG00000250198.1|RP11-143A12.3	ENST00000506655.1|RP11-143A12.3|ENSG00000250198.1|RP11-143A12.3	ENST00000510067.1|RP11-143A12.3|ENSG00000250198.1|RP11-143A12.3
hg19_v2_chr19_+_11200038_11200155	0.136079	HOXC12_HOXD12	ENST00000558518.1|LDLR|ENSG00000130164.7|low density lipoprotein receptor 	ENST00000557933.1|LDLR|ENSG00000130164.7|low density lipoprotein receptor 	ENST00000455727.2|LDLR|ENSG00000130164.7|low density lipoprotein receptor 	ENST00000535915.1|LDLR|ENSG00000130164.7|low density lipoprotein receptor 	ENST00000545707.1|LDLR|ENSG00000130164.7|low density lipoprotein receptor 	ENST00000558013.1|LDLR|ENSG00000130164.7|low density lipoprotein receptor
hg19_v2_chr7_-_76247617_76247617	0.135808	HOXC12_HOXD12	ENST00000441393.1|POMZP3|ENSG00000146707.10|POM121 and ZP3 fusion
hg19_v2_chr19_+_40854363_40854519	0.134913	HOXC12_HOXD12	ENST00000599685.1|PLD3|ENSG00000105223.14|phospholipase D family, member 3 	ENST00000392032.2|PLD3|ENSG00000105223.14|phospholipase D family, member 3
hg19_v2_chr10_-_12237836_12237900	0.134341	HOXC12_HOXD12	ENST00000444732.1|NUDT5|ENSG00000165609.8|nudix (nucleoside diphosphate linked moiety X)-type motif 5 	ENST00000378940.3|NUDT5|ENSG00000165609.8|nudix (nucleoside diphosphate linked moiety X)-type motif 5
hg19_v2_chr8_-_144699628_144699656	0.132806	HOXC12_HOXD12	ENST00000529048.1|TSTA3|ENSG00000104522.11|tissue specific transplantation antigen P35B 	ENST00000529064.1|TSTA3|ENSG00000104522.11|tissue specific transplantation antigen P35B
hg19_v2_chr7_+_2443202_2443260	0.131971	HOXC12_HOXD12	ENST00000258711.6|CHST12|ENSG00000136213.7|carbohydrate (chondroitin 4) sulfotransferase 12
hg19_v2_chr19_+_18668616_18668634	0.13154	HOXC12_HOXD12	ENST00000600372.1|KXD1|ENSG00000105700.6|KxDL motif containing 1
hg19_v2_chr18_+_616711_616720	0.129768	HOXC12_HOXD12	ENST00000579494.1|CLUL1|ENSG00000079101.12|clusterin-like 1 (retinal)
hg19_v2_chr1_-_23504176_23504301	0.129191	HOXC12_HOXD12	ENST00000302291.4|LUZP1|ENSG00000169641.9|leucine zipper protein 1
hg19_v2_chr19_+_44331493_44331552	0.128793	HOXC12_HOXD12	ENST00000588797.1|ZNF283|ENSG00000167637.12|zinc finger protein 283
hg19_v2_chr12_+_120105558_120105694	0.128322	HOXC12_HOXD12	ENST00000229328.5|PRKAB1|ENSG00000111725.6|protein kinase, AMP-activated, beta 1 non-catalytic subunit 	ENST00000541640.1|PRKAB1|ENSG00000111725.6|protein kinase, AMP-activated, beta 1 non-catalytic subunit
hg19_v2_chr7_+_57509877_57509895	0.128212	HOXC12_HOXD12	ENST00000420713.1|ZNF716|ENSG00000182111.8|zinc finger protein 716
hg19_v2_chr12_+_58087901_58087947	0.128178	HOXC12_HOXD12	ENST00000315970.7|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000547079.1|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000439210.2|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000389146.6|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000413095.2|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000551035.1|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000257966.8|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000435406.2|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000550372.1|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000389142.5|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin
hg19_v2_chr2_+_119981384_119981446	0.126943	HOXC12_HOXD12	ENST00000393108.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000354888.5|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000450943.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000393110.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000393106.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000409811.1|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000393107.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase
hg19_v2_chr2_-_136594740_136594760	0.126506	HOXC12_HOXD12	ENST00000264162.2|LCT|ENSG00000115850.5|lactase
hg19_v2_chr9_+_91933726_91933766	0.12536	HOXC12_HOXD12	ENST00000534113.2|SECISBP2|ENSG00000187742.10|SECIS binding protein 2
hg19_v2_chr21_-_46359760_46359828	0.124919	HOXC12_HOXD12	ENST00000330551.3|C21orf67|ENSG00000183250.7|chromosome 21 open reading frame 67 	ENST00000397841.1|C21orf67|ENSG00000183250.7|chromosome 21 open reading frame 67 	ENST00000380070.4|C21orf67|ENSG00000183250.7|chromosome 21 open reading frame 67
hg19_v2_chr10_+_12238171_12238241	0.124363	HOXC12_HOXD12	ENST00000378900.2|CDC123|ENSG00000151465.9|cell division cycle 123 	ENST00000442050.1|CDC123|ENSG00000151465.9|cell division cycle 123
hg19_v2_chr17_+_71228793_71228838	0.12357	HOXC12_HOXD12	ENST00000426147.2|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80
hg19_v2_chr19_-_49955050_49955095	0.122742	HOXC12_HOXD12	ENST00000262265.5|PIH1D1|ENSG00000104872.6|PIH1 domain containing 1
hg19_v2_chr6_-_112080256_112080334	0.121912	HOXC12_HOXD12	ENST00000462856.2|FYN|ENSG00000010810.13|FYN oncogene related to SRC, FGR, YES 	ENST00000229471.4|FYN|ENSG00000010810.13|FYN oncogene related to SRC, FGR, YES
hg19_v2_chr9_+_15552867_15552907	0.120736	HOXC12_HOXD12	ENST00000535968.1|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr19_+_14640372_14640420	0.119828	HOXC12_HOXD12	ENST00000215567.5|TECR|ENSG00000099797.7|trans-2,3-enoyl-CoA reductase 	ENST00000598298.1|TECR|ENSG00000099797.7|trans-2,3-enoyl-CoA reductase 	ENST00000596073.1|TECR|ENSG00000099797.7|trans-2,3-enoyl-CoA reductase 	ENST00000600083.1|TECR|ENSG00000099797.7|trans-2,3-enoyl-CoA reductase 	ENST00000436007.2|TECR|ENSG00000099797.7|trans-2,3-enoyl-CoA reductase
hg19_v2_chr15_+_72410660_72410679	0.119475	HOXC12_HOXD12	ENST00000564082.1|SENP8|ENSG00000166192.10|SUMO/sentrin specific peptidase family member 8
hg19_v2_chr10_-_52383644_52383743	0.119117	HOXC12_HOXD12	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr3_-_186288097_186288113	0.119008	HOXC12_HOXD12	ENST00000446782.1|TBCCD1|ENSG00000113838.8|TBCC domain containing 1
hg19_v2_chr11_-_107729887_107729927	0.118225	HOXC12_HOXD12	ENST00000525815.1|SLC35F2|ENSG00000110660.10|solute carrier family 35, member F2
hg19_v2_chr7_-_27219632_27219660	0.117624	HOXC12_HOXD12	ENST00000470747.4|RP1-170O19.20|ENSG00000257184.2|Uncharacterized protein
hg19_v2_chr7_+_35756092_35756105	0.117104	HOXC12_HOXD12	ENST00000458087.3|AC018647.3|ENSG00000227544.4|AC018647.3
hg19_v2_chr12_+_28605426_28605475	0.1167	HOXC12_HOXD12	ENST00000542801.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91
hg19_v2_chr17_+_11501816_11501834	0.115958	HOXC12_HOXD12	ENST00000454412.2|DNAH9|ENSG00000007174.13|dynein, axonemal, heavy chain 9
hg19_v2_chr2_-_27435125_27435182	0.115895	HOXC12_HOXD12	ENST00000414408.1|SLC5A6|ENSG00000138074.10|solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6 	ENST00000310574.3|SLC5A6|ENSG00000138074.10|solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6
hg19_v2_chr7_+_90339169_90339182	0.115184	HOXC12_HOXD12	ENST00000436577.2|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr19_-_49955096_49955158	0.115031	HOXC12_HOXD12	ENST00000595550.1|PIH1D1|ENSG00000104872.6|PIH1 domain containing 1
hg19_v2_chr8_+_94710789_94710816	0.115009	HOXC12_HOXD12	ENST00000523475.1|FAM92A1|ENSG00000188343.8|family with sequence similarity 92, member A1
hg19_v2_chr1_+_24117627_24117659	0.11411	HOXC12_HOXD12	ENST00000400061.1|LYPLA2|ENSG00000011009.6|lysophospholipase II
hg19_v2_chr6_+_34725263_34725331	0.113826	HOXC12_HOXD12	ENST00000374018.1|SNRPC|ENSG00000124562.5|small nuclear ribonucleoprotein polypeptide C 	ENST00000374017.3|SNRPC|ENSG00000124562.5|small nuclear ribonucleoprotein polypeptide C
hg19_v2_chr3_+_259218_259270	0.113596	HOXC12_HOXD12	ENST00000449294.2|CHL1|ENSG00000134121.5|cell adhesion molecule L1-like
hg19_v2_chr20_-_1569278_1569349	0.112627	HOXC12_HOXD12	ENST00000262929.5|SIRPB1|ENSG00000101307.11|signal-regulatory protein beta 1 	ENST00000567028.1|RP4-576H24.4|ENSG00000260861.2|Uncharacterized protein
hg19_v2_chr1_+_204485571_204485619	0.111598	HOXC12_HOXD12	ENST00000454264.2|MDM4|ENSG00000198625.8|Mdm4 p53 binding protein homolog (mouse) 	ENST00000367183.3|MDM4|ENSG00000198625.8|Mdm4 p53 binding protein homolog (mouse)
hg19_v2_chr22_-_32058166_32058229	0.111482	HOXC12_HOXD12	ENST00000435900.1|PISD|ENSG00000241878.5|phosphatidylserine decarboxylase 	ENST00000336566.4|PISD|ENSG00000241878.5|phosphatidylserine decarboxylase
hg19_v2_chr6_-_51952418_51952428	0.110485	HOXC12_HOXD12	ENST00000371117.3|PKHD1|ENSG00000170927.10|polycystic kidney and hepatic disease 1 (autosomal recessive)
hg19_v2_chr12_-_11339543_11339543	0.110171	HOXC12_HOXD12	ENST00000334266.1|TAS2R42|ENSG00000186136.1|taste receptor, type 2, member 42
hg19_v2_chr1_-_78444738_78444773	0.110141	HOXC12_HOXD12	ENST00000436586.2|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1 	ENST00000370768.2|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1
hg19_v2_chr16_-_88878305_88878362	0.108322	HOXC12_HOXD12	ENST00000569616.1|APRT|ENSG00000198931.6|adenine phosphoribosyltransferase 	ENST00000563655.1|APRT|ENSG00000198931.6|adenine phosphoribosyltransferase 	ENST00000567713.1|APRT|ENSG00000198931.6|adenine phosphoribosyltransferase 	ENST00000426324.2|APRT|ENSG00000198931.6|adenine phosphoribosyltransferase 	ENST00000378364.3|APRT|ENSG00000198931.6|adenine phosphoribosyltransferase
hg19_v2_chr12_-_6602955_6603022	0.107914	HOXC12_HOXD12	ENST00000543703.1|MRPL51|ENSG00000111639.3|mitochondrial ribosomal protein L51
hg19_v2_chr1_+_199996702_199996732	0.107876	HOXC12_HOXD12	ENST00000367362.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr1_+_146714291_146714420	0.107335	HOXC12_HOXD12	ENST00000431239.1|CHD1L|ENSG00000131778.13|chromodomain helicase DNA binding protein 1-like 	ENST00000369259.3|CHD1L|ENSG00000131778.13|chromodomain helicase DNA binding protein 1-like 	ENST00000369258.4|CHD1L|ENSG00000131778.13|chromodomain helicase DNA binding protein 1-like 	ENST00000361293.5|CHD1L|ENSG00000131778.13|chromodomain helicase DNA binding protein 1-like
hg19_v2_chr2_+_74056066_74056135	0.106121	HOXC12_HOXD12	ENST00000339566.3|STAMBP|ENSG00000124356.11|STAM binding protein 	ENST00000409707.1|STAMBP|ENSG00000124356.11|STAM binding protein 	ENST00000452725.1|STAMBP|ENSG00000124356.11|STAM binding protein 	ENST00000432295.2|STAMBP|ENSG00000124356.11|STAM binding protein 	ENST00000424659.1|STAMBP|ENSG00000124356.11|STAM binding protein 	ENST00000394073.1|STAMBP|ENSG00000124356.11|STAM binding protein
hg19_v2_chr2_+_135596106_135596137	0.106022	HOXC12_HOXD12	ENST00000356140.5|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase
hg19_v2_chr6_-_49681235_49681274	0.104716	HOXC12_HOXD12	ENST00000339139.4|CRISP2|ENSG00000124490.9|cysteine-rich secretory protein 2
hg19_v2_chr9_-_77502636_77502795	0.103277	HOXC12_HOXD12	ENST00000449912.2|TRPM6|ENSG00000119121.17|transient receptor potential cation channel, subfamily M, member 6
hg19_v2_chr4_+_78829479_78829479	0.102647	HOXC12_HOXD12	ENST00000504901.1|MRPL1|ENSG00000169288.13|mitochondrial ribosomal protein L1
hg19_v2_chr17_-_36904437_36904631	0.102163	HOXC12_HOXD12	ENST00000585100.1|PCGF2|ENSG00000056661.9|polycomb group ring finger 2 	ENST00000360797.2|PCGF2|ENSG00000056661.9|polycomb group ring finger 2 	ENST00000578109.1|PCGF2|ENSG00000056661.9|polycomb group ring finger 2 	ENST00000579882.1|PCGF2|ENSG00000056661.9|polycomb group ring finger 2
hg19_v2_chr7_+_80275953_80275969	0.101932	HOXC12_HOXD12	ENST00000538969.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor) 	ENST00000544133.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor) 	ENST00000433696.2|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr12_+_110940111_110940142	0.100795	HOXC12_HOXD12	ENST00000409778.3|RAD9B|ENSG00000151164.14|RAD9 homolog B (S. pombe)
hg19_v2_chr4_-_39367949_39368020	0.0996991	HOXC12_HOXD12	ENST00000503784.1|RFC1|ENSG00000035928.10|replication factor C (activator 1) 1, 145kDa 	ENST00000349703.2|RFC1|ENSG00000035928.10|replication factor C (activator 1) 1, 145kDa 	ENST00000381897.1|RFC1|ENSG00000035928.10|replication factor C (activator 1) 1, 145kDa
hg19_v2_chr20_+_19870167_19870225	0.0987299	HOXC12_HOXD12	ENST00000440354.2|RIN2|ENSG00000132669.8|Ras and Rab interactor 2
hg19_v2_chr11_-_16419067_16419108	0.0982088	HOXC12_HOXD12	ENST00000533411.1|SOX6|ENSG00000110693.11|SRY (sex determining region Y)-box 6
hg19_v2_chr12_+_104850771_104850791	0.0975162	HOXC12_HOXD12	ENST00000546689.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v2_chr7_-_128050000_128050023	0.0974044	HOXC12_HOXD12	ENST00000489263.1|IMPDH1|ENSG00000106348.12|IMP (inosine 5'-monophosphate) dehydrogenase 1
hg19_v2_chr13_+_53602894_53602924	0.096888	HOXC12_HOXD12	ENST00000219022.2|OLFM4|ENSG00000102837.6|olfactomedin 4
hg19_v2_chr1_+_24117693_24117717	0.0964051	HOXC12_HOXD12	ENST00000374503.3|LYPLA2|ENSG00000011009.6|lysophospholipase II 	ENST00000374502.3|LYPLA2|ENSG00000011009.6|lysophospholipase II
hg19_v2_chr17_+_71228843_71228868	0.0959897	HOXC12_HOXD12	ENST00000582391.1|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80
hg19_v2_chr3_+_137906109_137906153	0.0959383	HOXC12_HOXD12	ENST00000481646.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000469044.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000491704.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000461600.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8
hg19_v2_chr8_+_117963190_117963224	0.0956219	HOXC12_HOXD12	ENST00000427715.2|SLC30A8|ENSG00000164756.8|solute carrier family 30 (zinc transporter), member 8
hg19_v2_chr19_-_38085633_38085706	0.0951552	HOXC12_HOXD12	ENST00000593133.1|ZNF571|ENSG00000180479.9|zinc finger protein 571 	ENST00000590751.1|ZNF571|ENSG00000180479.9|zinc finger protein 571 	ENST00000358744.3|ZNF571|ENSG00000180479.9|zinc finger protein 571 	ENST00000328550.2|ZNF571|ENSG00000180479.9|zinc finger protein 571 	ENST00000451802.2|ZNF571|ENSG00000180479.9|zinc finger protein 571
hg19_v2_chr19_+_21265028_21265056	0.0949468	HOXC12_HOXD12	ENST00000291770.7|ZNF714|ENSG00000160352.11|zinc finger protein 714
hg19_v2_chr6_+_52930237_52930257	0.094587	HOXC12_HOXD12	ENST00000323557.7|FBXO9|ENSG00000112146.12|F-box protein 9
hg19_v2_chr2_+_217277137_217277266	0.0944355	HOXC12_HOXD12	ENST00000430374.1|SMARCAL1|ENSG00000138375.8|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 	ENST00000357276.4|SMARCAL1|ENSG00000138375.8|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 	ENST00000444508.1|SMARCAL1|ENSG00000138375.8|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
hg19_v2_chr17_+_11501748_11501806	0.0941563	HOXC12_HOXD12	ENST00000262442.4|DNAH9|ENSG00000007174.13|dynein, axonemal, heavy chain 9 	ENST00000579828.1|DNAH9|ENSG00000007174.13|dynein, axonemal, heavy chain 9
hg19_v2_chr3_+_32737027_32737048	0.0939606	HOXC12_HOXD12	ENST00000454516.2|CNOT10|ENSG00000182973.14|CCR4-NOT transcription complex, subunit 10
hg19_v2_chr12_+_54402790_54402832	0.0939434	HOXC12_HOXD12	ENST00000040584.4|HOXC8|ENSG00000037965.4|homeobox C8
hg19_v2_chr2_-_27435390_27435561	0.0934614	HOXC12_HOXD12	ENST00000428518.1|SLC5A6|ENSG00000138074.10|solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6
hg19_v2_chr2_+_234545148_234545161	0.0933482	HOXC12_HOXD12	ENST00000373445.1|UGT1A10|ENSG00000242515.1|UDP glucuronosyltransferase 1 family, polypeptide A10
hg19_v2_chr16_+_67906919_67906937	0.092721	HOXC12_HOXD12	ENST00000358933.5|EDC4|ENSG00000038358.10|enhancer of mRNA decapping 4
hg19_v2_chr19_-_55677920_55677989	0.092608	HOXC12_HOXD12	ENST00000524407.2|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3 	ENST00000526003.1|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3 	ENST00000534170.1|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3
hg19_v2_chr1_+_171750776_171750870	0.0917235	HOXC12_HOXD12	ENST00000458517.1|METTL13|ENSG00000010165.15|methyltransferase like 13 	ENST00000362019.3|METTL13|ENSG00000010165.15|methyltransferase like 13 	ENST00000367737.5|METTL13|ENSG00000010165.15|methyltransferase like 13 	ENST00000361735.3|METTL13|ENSG00000010165.15|methyltransferase like 13
hg19_v2_chr11_-_58035732_58035732	0.091424	HOXC12_HOXD12	ENST00000395079.2|OR10W1|ENSG00000172772.3|olfactory receptor, family 10, subfamily W, member 1
hg19_v2_chr5_+_115387163_115387163	0.0912769	HOXC12_HOXD12	ENST00000601302.2|ARL14EPL|ENSG00000268223.2|ADP-ribosylation factor-like 14 effector protein-like
hg19_v2_chr4_-_17513702_17513720	0.090386	HOXC12_HOXD12	ENST00000428702.2|QDPR|ENSG00000151552.7|quinoid dihydropteridine reductase 	ENST00000508623.1|QDPR|ENSG00000151552.7|quinoid dihydropteridine reductase 	ENST00000513615.1|QDPR|ENSG00000151552.7|quinoid dihydropteridine reductase
hg19_v2_chr8_+_77318769_77318889	0.0883431	HOXC12_HOXD12	ENST00000518732.1|RP11-706J10.1|ENSG00000254300.1|long intergenic non-protein coding RNA 1111
hg19_v2_chr11_+_33278811_33279133	0.0882024	HOXC12_HOXD12	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr5_+_140552218_140552244	0.0868112	HOXC12_HOXD12	ENST00000231137.3|PCDHB7|ENSG00000113212.4|protocadherin beta 7
hg19_v2_chr17_-_57784755_57784987	0.0867514	HOXC12_HOXD12	ENST00000537860.1|PTRH2|ENSG00000141378.13|peptidyl-tRNA hydrolase 2 	ENST00000393038.2|PTRH2|ENSG00000141378.13|peptidyl-tRNA hydrolase 2 	ENST00000409433.2|PTRH2|ENSG00000141378.13|peptidyl-tRNA hydrolase 2
hg19_v2_chr2_-_88285309_88285309	0.0861879	HOXC12_HOXD12	ENST00000420840.2|RGPD2|ENSG00000185304.12|RANBP2-like and GRIP domain containing 2
hg19_v2_chr7_-_78400598_78400654	0.0859631	HOXC12_HOXD12	ENST00000536571.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr10_-_12238071_12238154	0.0858686	HOXC12_HOXD12	ENST00000491614.1|NUDT5|ENSG00000165609.8|nudix (nucleoside diphosphate linked moiety X)-type motif 5 	ENST00000537776.1|NUDT5|ENSG00000165609.8|nudix (nucleoside diphosphate linked moiety X)-type motif 5
hg19_v2_chr12_+_42725554_42725604	0.0853711	HOXC12_HOXD12	ENST00000546750.1|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000547847.1|PPHLN1|ENSG00000134283.13|periphilin 1
hg19_v2_chr8_-_21669826_21669869	0.0853321	HOXC12_HOXD12	ENST00000517328.1|GFRA2|ENSG00000168546.6|GDNF family receptor alpha 2
hg19_v2_chr1_+_114522049_114522131	0.0850949	HOXC12_HOXD12	ENST00000369551.1|OLFML3|ENSG00000116774.7|olfactomedin-like 3 	ENST00000320334.4|OLFML3|ENSG00000116774.7|olfactomedin-like 3
hg19_v2_chr12_+_110940005_110940100	0.0845645	HOXC12_HOXD12	ENST00000409246.1|RAD9B|ENSG00000151164.14|RAD9 homolog B (S. pombe) 	ENST00000392672.4|RAD9B|ENSG00000151164.14|RAD9 homolog B (S. pombe) 	ENST00000409300.1|RAD9B|ENSG00000151164.14|RAD9 homolog B (S. pombe) 	ENST00000409425.1|RAD9B|ENSG00000151164.14|RAD9 homolog B (S. pombe)
hg19_v2_chr19_+_13885252_13885293	0.0843354	HOXC12_HOXD12	ENST00000221576.4|C19orf53|ENSG00000104979.4|chromosome 19 open reading frame 53
hg19_v2_chr3_+_63638372_63638390	0.0837399	HOXC12_HOXD12	ENST00000496807.1|SNTN|ENSG00000188817.3|sentan, cilia apical structure protein
hg19_v2_chr22_+_18893816_18893866	0.0836749	HOXC12_HOXD12	ENST00000608842.1|DGCR6|ENSG00000183628.8|DiGeorge syndrome critical region gene 6
hg19_v2_chr21_-_28215332_28215347	0.082291	HOXC12_HOXD12	ENST00000517777.1|ADAMTS1|ENSG00000154734.10|ADAM metallopeptidase with thrombospondin type 1 motif, 1
hg19_v2_chr8_+_16884740_16884804	0.0820281	HOXC12_HOXD12	ENST00000318063.5|MICU3|ENSG00000155970.7|mitochondrial calcium uptake family, member 3
hg19_v2_chr4_-_129207942_129207962	0.0818197	HOXC12_HOXD12	ENST00000503588.1|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chr19_+_13858593_13858680	0.08118	HOXC12_HOXD12	ENST00000221554.8|CCDC130|ENSG00000104957.9|coiled-coil domain containing 130
hg19_v2_chr17_-_72619869_72619897	0.0809293	HOXC12_HOXD12	ENST00000392619.1|CD300E|ENSG00000186407.4|CD300e molecule 	ENST00000426295.2|CD300E|ENSG00000186407.4|CD300e molecule
hg19_v2_chr6_-_127840021_127840047	0.0798442	HOXC12_HOXD12	ENST00000465909.2|SOGA3|ENSG00000214338.6|SOGA family member 3
hg19_v2_chr8_+_24151620_24151647	0.0797733	HOXC12_HOXD12	ENST00000437154.2|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28
hg19_v2_chr8_-_60031762_60031803	0.0791881	HOXC12_HOXD12	ENST00000361421.1|TOX|ENSG00000198846.5|thymocyte selection-associated high mobility group box
hg19_v2_chr7_-_128049955_128049993	0.0790109	HOXC12_HOXD12	ENST00000419067.2|IMPDH1|ENSG00000106348.12|IMP (inosine 5'-monophosphate) dehydrogenase 1 	ENST00000378717.4|IMPDH1|ENSG00000106348.12|IMP (inosine 5'-monophosphate) dehydrogenase 1
hg19_v2_chr12_+_130646999_130647019	0.0779131	HOXC12_HOXD12	ENST00000539839.1|FZD10|ENSG00000111432.4|frizzled family receptor 10 	ENST00000229030.4|FZD10|ENSG00000111432.4|frizzled family receptor 10
hg19_v2_chr4_-_69111401_69111438	0.0776722	HOXC12_HOXD12	ENST00000332644.5|TMPRSS11B|ENSG00000185873.7|transmembrane protease, serine 11B
hg19_v2_chr6_-_28554977_28555112	0.0771401	HOXC12_HOXD12	ENST00000452236.2|SCAND3|ENSG00000232040.2|SCAN domain containing 3
hg19_v2_chr17_-_37009882_37010096	0.0769914	HOXC12_HOXD12	ENST00000378096.3|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000394332.1|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000394333.1|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000577407.1|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000479035.2|RPL23|ENSG00000125691.8|ribosomal protein L23
hg19_v2_chr7_+_23338819_23338973	0.0766463	HOXC12_HOXD12	ENST00000466681.1|MALSU1|ENSG00000156928.4|mitochondrial assembly of ribosomal large subunit 1
hg19_v2_chr7_-_132261253_132261323	0.0758217	HOXC12_HOXD12	ENST00000321063.4|PLXNA4|ENSG00000221866.5|plexin A4
hg19_v2_chr17_-_73127353_73127633	0.0757573	HOXC12_HOXD12	ENST00000580423.1|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic 	ENST00000578337.1|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic 	ENST00000582160.1|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic
hg19_v2_chr10_-_12237820_12237834	0.0754784	HOXC12_HOXD12	ENST00000378937.3|NUDT5|ENSG00000165609.8|nudix (nucleoside diphosphate linked moiety X)-type motif 5 	ENST00000378927.3|NUDT5|ENSG00000165609.8|nudix (nucleoside diphosphate linked moiety X)-type motif 5
hg19_v2_chr8_-_114389353_114389387	0.0752243	HOXC12_HOXD12	ENST00000343508.3|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3
hg19_v2_chr12_-_122751002_122751068	0.0749951	HOXC12_HOXD12	ENST00000267199.4|VPS33A|ENSG00000139719.5|vacuolar protein sorting 33 homolog A (S. cerevisiae)
hg19_v2_chr7_+_6797288_6797288	0.0746725	HOXC12_HOXD12	ENST00000433859.2|RSPH10B2|ENSG00000169402.11|radial spoke head 10 homolog B2 (Chlamydomonas) 	ENST00000359718.3|RSPH10B2|ENSG00000169402.11|radial spoke head 10 homolog B2 (Chlamydomonas)
hg19_v2_chr2_-_177684007_177684038	0.0744201	HOXC12_HOXD12	ENST00000451851.1|AC092162.1|ENSG00000230552.1|AC092162.1
hg19_v2_chr15_-_79576156_79576222	0.0731598	HOXC12_HOXD12	ENST00000560452.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000560872.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000560732.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000559979.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000560533.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000559225.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4
hg19_v2_chr3_-_18466026_18466065	0.0726994	HOXC12_HOXD12	ENST00000417717.2|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr1_+_36396677_36396749	0.0726084	HOXC12_HOXD12	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr6_-_127840048_127840074	0.0726066	HOXC12_HOXD12	ENST00000467753.1|SOGA3|ENSG00000214338.6|SOGA family member 3
hg19_v2_chrX_-_100548045_100548059	0.0717407	HOXC12_HOXD12	ENST00000372907.3|TAF7L|ENSG00000102387.11|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa 	ENST00000372905.2|TAF7L|ENSG00000102387.11|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa
hg19_v2_chr8_-_18711866_18711911	0.0716927	HOXC12_HOXD12	ENST00000519851.1|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr15_-_41836441_41836475	0.0714609	HOXC12_HOXD12	ENST00000567866.1|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1 	ENST00000561603.1|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1 	ENST00000304330.4|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1 	ENST00000566863.1|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1
hg19_v2_chr22_+_18893736_18893804	0.0701779	HOXC12_HOXD12	ENST00000331444.6|DGCR6|ENSG00000183628.8|DiGeorge syndrome critical region gene 6
hg19_v2_chr17_-_191188_191219	0.0701613	HOXC12_HOXD12	ENST00000575634.1|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains)
hg19_v2_chr1_+_15802594_15802601	0.0698135	HOXC12_HOXD12	ENST00000375910.3|CELA2B|ENSG00000215704.5|chymotrypsin-like elastase family, member 2B
hg19_v2_chr7_+_80275752_80275779	0.0695076	HOXC12_HOXD12	ENST00000419819.2|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr3_-_134093738_134093769	0.0691537	HOXC12_HOXD12	ENST00000506107.1|AMOTL2|ENSG00000114019.10|angiomotin like 2
hg19_v2_chr1_-_35450897_35450954	0.0687364	HOXC12_HOXD12	ENST00000373337.3|ZMYM6NB|ENSG00000243749.1|ZMYM6 neighbor
hg19_v2_chr19_-_5680231_5680277	0.0684266	HOXC12_HOXD12	ENST00000587950.1|C19orf70|ENSG00000174917.4|chromosome 19 open reading frame 70
hg19_v2_chr3_-_56502375_56502428	0.06789	HOXC12_HOXD12	ENST00000288221.6|ERC2|ENSG00000187672.8|ELKS/RAB6-interacting/CAST family member 2
hg19_v2_chr10_+_6625733_6625767	0.0676583	HOXC12_HOXD12	ENST00000607982.1|PRKCQ-AS1|ENSG00000237943.2|PRKCQ antisense RNA 1 	ENST00000608526.1|PRKCQ-AS1|ENSG00000237943.2|PRKCQ antisense RNA 1
hg19_v2_chr19_-_48753028_48753043	0.0671121	HOXC12_HOXD12	ENST00000522431.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr5_+_140227048_140227048	0.0670934	HOXC12_HOXD12	ENST00000532602.1|PCDHA9|ENSG00000204961.5|protocadherin alpha 9
hg19_v2_chr12_+_76653611_76653630	0.0670383	HOXC12_HOXD12	ENST00000550380.1|RP11-54A9.1|ENSG00000257219.1|RP11-54A9.1
hg19_v2_chr12_-_59175485_59175529	0.0654878	HOXC12_HOXD12	ENST00000550678.1|RP11-767I20.1|ENSG00000257259.1|RP11-767I20.1	ENST00000552201.1|RP11-767I20.1|ENSG00000257259.1|RP11-767I20.1
hg19_v2_chr17_-_73127778_73127821	0.0647764	HOXC12_HOXD12	ENST00000578407.1|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic
hg19_v2_chr9_+_133569108_133569193	0.0647081	HOXC12_HOXD12	ENST00000372358.5|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000546165.1|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372352.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372351.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372350.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000495699.2|EXOSC2|ENSG00000130713.11|exosome component 2
hg19_v2_chr13_+_52586517_52586559	0.0647037	HOXC12_HOXD12	ENST00000523764.1|ALG11|ENSG00000253710.1|ALG11, alpha-1,2-mannosyltransferase 	ENST00000521508.1|ALG11|ENSG00000253710.1|ALG11, alpha-1,2-mannosyltransferase
hg19_v2_chr14_-_22005197_22005261	0.0645129	HOXC12_HOXD12	ENST00000541965.1|SALL2|ENSG00000165821.7|spalt-like transcription factor 2
hg19_v2_chr4_-_74964904_74965010	0.0631313	HOXC12_HOXD12	ENST00000508487.2|CXCL2|ENSG00000081041.8|chemokine (C-X-C motif) ligand 2
hg19_v2_chr5_+_158737824_158737941	0.0629225	HOXC12_HOXD12	ENST00000521472.1|AC008697.1|ENSG00000249738.2|AC008697.1
hg19_v2_chr14_+_35591020_35591069	0.061886	HOXC12_HOXD12	ENST00000603611.1|KIAA0391|ENSG00000100890.11|KIAA0391
hg19_v2_chr5_+_140227357_140227357	0.0612669	HOXC12_HOXD12	ENST00000378122.3|PCDHA9|ENSG00000204961.5|protocadherin alpha 9
hg19_v2_chr7_+_49813255_49813269	0.0609858	HOXC12_HOXD12	ENST00000340652.4|VWC2|ENSG00000188730.4|von Willebrand factor C domain containing 2
hg19_v2_chr11_+_7618413_7618427	0.0608137	HOXC12_HOXD12	ENST00000528883.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chr1_+_151584544_151584558	0.0605057	HOXC12_HOXD12	ENST00000458013.2|SNX27|ENSG00000143376.8|sorting nexin family member 27 	ENST00000368843.3|SNX27|ENSG00000143376.8|sorting nexin family member 27
hg19_v2_chr3_-_17783990_17784155	0.0599764	HOXC12_HOXD12	ENST00000429383.4|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000446863.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000414349.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000428355.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000425944.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000445294.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000444471.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000415814.2|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5
hg19_v2_chr4_-_16085657_16085668	0.0598063	HOXC12_HOXD12	ENST00000543373.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chr4_+_106631966_106632003	0.0589895	HOXC12_HOXD12	ENST00000360505.5|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000510865.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000509336.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing
hg19_v2_chr12_-_10251603_10251619	0.0589434	HOXC12_HOXD12	ENST00000457018.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr5_+_140213815_140213969	0.0580636	HOXC12_HOXD12	ENST00000525929.1|PCDHA7|ENSG00000204963.4|protocadherin alpha 7 	ENST00000378125.3|PCDHA7|ENSG00000204963.4|protocadherin alpha 7
hg19_v2_chr1_+_16083154_16083168	0.0575203	HOXC12_HOXD12	ENST00000375771.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1
hg19_v2_chr13_-_29293058_29293138	0.0573997	HOXC12_HOXD12	ENST00000380814.4|SLC46A3|ENSG00000139508.10|solute carrier family 46, member 3
hg19_v2_chr17_-_34890709_34890730	0.0569121	HOXC12_HOXD12	ENST00000544606.1|MYO19|ENSG00000141140.12|myosin XIX
hg19_v2_chr18_-_53255379_53255391	0.0568889	HOXC12_HOXD12	ENST00000565908.2|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr17_-_60883993_60884014	0.0566916	HOXC12_HOXD12	ENST00000583803.1|MARCH10|ENSG00000173838.7|membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase 	ENST00000456609.2|MARCH10|ENSG00000173838.7|membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase
hg19_v2_chr10_+_51371390_51371436	0.0565461	HOXC12_HOXD12	ENST00000478381.1|TIMM23B|ENSG00000204152.6|translocase of inner mitochondrial membrane 23 homolog B (yeast) 	ENST00000451577.2|TIMM23B|ENSG00000204152.6|translocase of inner mitochondrial membrane 23 homolog B (yeast) 	ENST00000374098.2|TIMM23B|ENSG00000204152.6|translocase of inner mitochondrial membrane 23 homolog B (yeast) 	ENST00000374097.2|TIMM23B|ENSG00000204152.6|translocase of inner mitochondrial membrane 23 homolog B (yeast)
hg19_v2_chr12_+_70219052_70219096	0.0563298	HOXC12_HOXD12	ENST00000552032.2|MYRFL|ENSG00000166268.6|myelin regulatory factor-like 	ENST00000547771.2|MYRFL|ENSG00000166268.6|myelin regulatory factor-like
hg19_v2_chr1_-_147599549_147599549	0.0561463	HOXC12_HOXD12	ENST00000369228.5|NBPF24|ENSG00000203836.7|neuroblastoma breakpoint family, member 24
hg19_v2_chr17_-_79829190_79829282	0.0532798	HOXC12_HOXD12	ENST00000581876.1|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha 	ENST00000584461.1|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha 	ENST00000583868.1|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha 	ENST00000400721.4|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha 	ENST00000269321.7|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v2_chr7_-_6006768_6006768	0.0531897	HOXC12_HOXD12	ENST00000441023.2|RSPH10B|ENSG00000155026.12|radial spoke head 10 homolog B (Chlamydomonas)
hg19_v2_chr7_+_28452130_28452154	0.0527801	HOXC12_HOXD12	ENST00000357727.2|CREB5|ENSG00000146592.12|cAMP responsive element binding protein 5
hg19_v2_chr10_+_12237924_12237982	0.0519253	HOXC12_HOXD12	ENST00000429258.2|CDC123|ENSG00000151465.9|cell division cycle 123 	ENST00000281141.4|CDC123|ENSG00000151465.9|cell division cycle 123
hg19_v2_chr8_+_146024261_146024416	0.0518928	HOXC12_HOXD12	ENST00000359971.3|ZNF517|ENSG00000197363.5|zinc finger protein 517 	ENST00000528012.1|ZNF517|ENSG00000197363.5|zinc finger protein 517
hg19_v2_chr16_-_18908196_18908278	0.051384	HOXC12_HOXD12	ENST00000565324.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase 	ENST00000561947.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr4_-_16085314_16085334	0.0510085	HOXC12_HOXD12	ENST00000510224.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chr17_-_7760457_7760587	0.0509661	HOXC12_HOXD12	ENST00000576384.1|LSMD1|ENSG00000183011.9|LSM domain containing 1
hg19_v2_chr7_+_63709496_63709496	0.0499467	HOXC12_HOXD12	ENST00000255746.4|ZNF679|ENSG00000197123.5|zinc finger protein 679
hg19_v2_chr14_-_68000442_68000456	0.0494148	HOXC12_HOXD12	ENST00000554278.1|TMEM229B|ENSG00000198133.4|transmembrane protein 229B
hg19_v2_chr9_+_130853715_130853759	0.049239	HOXC12_HOXD12	ENST00000373066.5|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 	ENST00000432073.2|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg19_v2_chr4_-_16085340_16085358	0.048495	HOXC12_HOXD12	ENST00000508167.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chr3_-_112127981_112128034	0.0481054	HOXC12_HOXD12	ENST00000486726.2|RP11-231E6.1|ENSG00000243081.2|RP11-231E6.1
hg19_v2_chr7_-_128050027_128050053	0.0477037	HOXC12_HOXD12	ENST00000343214.4|IMPDH1|ENSG00000106348.12|IMP (inosine 5'-monophosphate) dehydrogenase 1 	ENST00000354269.5|IMPDH1|ENSG00000106348.12|IMP (inosine 5'-monophosphate) dehydrogenase 1 	ENST00000348127.6|IMPDH1|ENSG00000106348.12|IMP (inosine 5'-monophosphate) dehydrogenase 1 	ENST00000497868.1|IMPDH1|ENSG00000106348.12|IMP (inosine 5'-monophosphate) dehydrogenase 1
hg19_v2_chr16_-_29499154_29499154	0.0471541	HOXC12_HOXD12	ENST00000354563.5|RP11-231C14.4|ENSG00000169203.12|Uncharacterized protein
hg19_v2_chr19_-_5680202_5680220	0.045406	HOXC12_HOXD12	ENST00000590389.1|C19orf70|ENSG00000174917.4|chromosome 19 open reading frame 70
hg19_v2_chr10_-_98031265_98031306	0.0449508	HOXC12_HOXD12	ENST00000224337.5|BLNK|ENSG00000095585.12|B-cell linker 	ENST00000371176.2|BLNK|ENSG00000095585.12|B-cell linker
hg19_v2_chr10_+_31608054_31608156	0.044054	HOXC12_HOXD12	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr1_+_100817262_100817290	0.0438379	HOXC12_HOXD12	ENST00000455467.1|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr10_+_24755416_24755470	0.043829	HOXC12_HOXD12	ENST00000396446.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000396445.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000376451.2|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr19_-_44905741_44905797	0.043603	HOXC12_HOXD12	ENST00000591679.1|ZNF285|ENSG00000267508.1|zinc finger protein 285 	ENST00000544719.2|ZNF285|ENSG00000267508.1|zinc finger protein 285 	ENST00000330997.4|ZNF285|ENSG00000267508.1|zinc finger protein 285 	ENST00000588212.1|CTC-512J12.6|ENSG00000267173.1|Uncharacterized protein  	ENST00000585868.1|ZNF285|ENSG00000267508.1|zinc finger protein 285
hg19_v2_chr6_+_71122974_71123011	0.0432517	HOXC12_HOXD12	ENST00000418814.2|FAM135A|ENSG00000082269.12|family with sequence similarity 135, member A
hg19_v2_chr19_-_49496557_49496573	0.0429523	HOXC12_HOXD12	ENST00000323798.3|GYS1|ENSG00000104812.10|glycogen synthase 1 (muscle) 	ENST00000541188.1|GYS1|ENSG00000104812.10|glycogen synthase 1 (muscle) 	ENST00000544287.1|GYS1|ENSG00000104812.10|glycogen synthase 1 (muscle) 	ENST00000540532.1|GYS1|ENSG00000104812.10|glycogen synthase 1 (muscle) 	ENST00000263276.6|GYS1|ENSG00000104812.10|glycogen synthase 1 (muscle)
hg19_v2_chr12_+_76653682_76653687	0.0427109	HOXC12_HOXD12	ENST00000553247.1|RP11-54A9.1|ENSG00000257219.1|RP11-54A9.1
hg19_v2_chr2_+_101869262_101869279	0.0422088	HOXC12_HOXD12	ENST00000289382.3|CNOT11|ENSG00000158435.3|CCR4-NOT transcription complex, subunit 11
hg19_v2_chr4_-_1202611_1202644	0.0404711	HOXC12_HOXD12	ENST00000511679.1|SPON2|ENSG00000159674.7|spondin 2, extracellular matrix protein
hg19_v2_chr12_-_108154925_108154945	0.0397007	HOXC12_HOXD12	ENST00000228437.5|PRDM4|ENSG00000110851.7|PR domain containing 4
hg19_v2_chr14_-_22005343_22005364	0.0395864	HOXC12_HOXD12	ENST00000327430.3|SALL2|ENSG00000165821.7|spalt-like transcription factor 2
hg19_v2_chr2_+_27434860_27434964	0.0393207	HOXC12_HOXD12	ENST00000380171.3|ATRAID|ENSG00000138085.12|all-trans retinoic acid-induced differentiation factor
hg19_v2_chr18_+_63417864_63417889	0.0387065	HOXC12_HOXD12	ENST00000536984.2|CDH7|ENSG00000081138.9|cadherin 7, type 2
hg19_v2_chr20_-_45142154_45142227	0.0386447	HOXC12_HOXD12	ENST00000347606.4|ZNF334|ENSG00000198185.7|zinc finger protein 334 	ENST00000457685.2|ZNF334|ENSG00000198185.7|zinc finger protein 334
hg19_v2_chr17_-_73127826_73127890	0.0383733	HOXC12_HOXD12	ENST00000582170.1|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic 	ENST00000245552.2|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic
hg19_v2_chr4_-_129208030_129208034	0.0383022	HOXC12_HOXD12	ENST00000503872.1|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chr17_-_73901494_73901494	0.0381716	HOXC12_HOXD12	ENST00000309352.3|MRPL38|ENSG00000204316.8|mitochondrial ribosomal protein L38
hg19_v2_chr5_+_140535577_140535577	0.0381188	HOXC12_HOXD12	ENST00000539533.1|PCDHB17|ENSG00000255622.1|Protocadherin-psi1; Uncharacterized protein
hg19_v2_chr2_+_27435734_27435777	0.0381009	HOXC12_HOXD12	ENST00000419744.1|ATRAID|ENSG00000138085.12|all-trans retinoic acid-induced differentiation factor
hg19_v2_chr18_+_9103957_9104080	0.0380945	HOXC12_HOXD12	ENST00000400033.1|NDUFV2|ENSG00000178127.8|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa
hg19_v2_chr11_-_85376121_85376181	0.0378492	HOXC12_HOXD12	ENST00000527447.1|CREBZF|ENSG00000137504.9|CREB/ATF bZIP transcription factor
hg19_v2_chr4_+_122722466_122722556	0.0377512	HOXC12_HOXD12	ENST00000243498.5|EXOSC9|ENSG00000123737.8|exosome component 9 	ENST00000379663.3|EXOSC9|ENSG00000123737.8|exosome component 9 	ENST00000509800.1|EXOSC9|ENSG00000123737.8|exosome component 9
hg19_v2_chr18_+_72166564_72166656	0.0372819	HOXC12_HOXD12	ENST00000583216.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family) 	ENST00000581912.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family) 	ENST00000582589.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family)
hg19_v2_chr8_+_24241789_24241802	0.037043	HOXC12_HOXD12	ENST00000256412.4|ADAMDEC1|ENSG00000134028.10|ADAM-like, decysin 1 	ENST00000538205.1|ADAMDEC1|ENSG00000134028.10|ADAM-like, decysin 1
hg19_v2_chr6_-_106773491_106773559	0.036158	HOXC12_HOXD12	ENST00000360666.4|ATG5|ENSG00000057663.8|autophagy related 5
hg19_v2_chr10_-_98031310_98031338	0.0359721	HOXC12_HOXD12	ENST00000427367.2|BLNK|ENSG00000095585.12|B-cell linker 	ENST00000413476.2|BLNK|ENSG00000095585.12|B-cell linker
hg19_v2_chr14_+_23776024_23776105	0.0349333	HOXC12_HOXD12	ENST00000553781.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000556100.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000557236.1|BCL2L2|ENSG00000129473.5|BCL2-like 2 	ENST00000557579.1|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr1_+_24117662_24117682	0.0342379	HOXC12_HOXD12	ENST00000420982.1|LYPLA2|ENSG00000011009.6|lysophospholipase II 	ENST00000374505.2|LYPLA2|ENSG00000011009.6|lysophospholipase II
hg19_v2_chr7_-_151330218_151330259	0.0332581	HOXC12_HOXD12	ENST00000476632.1|PRKAG2|ENSG00000106617.9|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
hg19_v2_chrX_+_17755563_17755618	0.0329431	HOXC12_HOXD12	ENST00000380045.3|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila) 	ENST00000380041.3|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila) 	ENST00000380043.3|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila) 	ENST00000398080.1|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila)
hg19_v2_chr1_-_158656488_158656511	0.0328125	HOXC12_HOXD12	ENST00000368147.4|SPTA1|ENSG00000163554.7|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)
hg19_v2_chr16_+_67143880_67144050	0.0327177	HOXC12_HOXD12	ENST00000219139.3|C16orf70|ENSG00000125149.7|chromosome 16 open reading frame 70 	ENST00000566026.1|C16orf70|ENSG00000125149.7|chromosome 16 open reading frame 70
hg19_v2_chr1_-_216978709_216978728	0.032504	HOXC12_HOXD12	ENST00000360012.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr1_+_100818009_100818072	0.0323991	HOXC12_HOXD12	ENST00000370125.2|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000361544.6|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000370124.3|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr18_-_53253323_53253359	0.0318699	HOXC12_HOXD12	ENST00000540999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000563888.2|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr19_+_38085731_38085762	0.0318173	HOXC12_HOXD12	ENST00000589117.1|ZNF540|ENSG00000171817.12|zinc finger protein 540
hg19_v2_chr13_+_78315528_78315673	0.0316846	HOXC12_HOXD12	ENST00000496045.1|SLAIN1|ENSG00000139737.17|SLAIN motif family, member 1
hg19_v2_chr2_-_113810444_113810444	0.0312585	HOXC12_HOXD12	ENST00000259213.4|IL36B|ENSG00000136696.6|interleukin 36, beta 	ENST00000327407.2|IL36B|ENSG00000136696.6|interleukin 36, beta
hg19_v2_chr2_+_138722028_138722057	0.0304774	HOXC12_HOXD12	ENST00000280096.5|HNMT|ENSG00000150540.9|histamine N-methyltransferase
hg19_v2_chr8_-_105479270_105479289	0.0300675	HOXC12_HOXD12	ENST00000521573.2|DPYS|ENSG00000147647.8|dihydropyrimidinase 	ENST00000351513.2|DPYS|ENSG00000147647.8|dihydropyrimidinase
hg19_v2_chr10_+_6625605_6625641	0.028851	HOXC12_HOXD12	ENST00000414894.1|PRKCQ-AS1|ENSG00000237943.2|PRKCQ antisense RNA 1 	ENST00000449648.1|PRKCQ-AS1|ENSG00000237943.2|PRKCQ antisense RNA 1
hg19_v2_chr4_-_17513604_17513694	0.0279808	HOXC12_HOXD12	ENST00000505710.1|QDPR|ENSG00000151552.7|quinoid dihydropteridine reductase
hg19_v2_chr12_-_53074182_53074197	0.0271536	HOXC12_HOXD12	ENST00000252244.3|KRT1|ENSG00000167768.4|keratin 1
hg19_v2_chr8_-_27850141_27850179	0.0266841	HOXC12_HOXD12	ENST00000524352.1|SCARA5|ENSG00000168079.12|scavenger receptor class A, member 5 (putative)
hg19_v2_chr8_-_80942061_80942086	0.0259854	HOXC12_HOXD12	ENST00000519386.1|MRPS28|ENSG00000147586.5|mitochondrial ribosomal protein S28
hg19_v2_chr19_-_38183228_38183242	0.0247142	HOXC12_HOXD12	ENST00000587199.1|ZFP30|ENSG00000120784.11|ZFP30 zinc finger protein
hg19_v2_chr10_-_51371321_51371321	0.024652	HOXC12_HOXD12	ENST00000602930.1|AGAP8|ENSG00000174194.11|ArfGAP with GTPase domain, ankyrin repeat and PH domain 8
hg19_v2_chr10_+_124913930_124913946	0.0244544	HOXC12_HOXD12	ENST00000368858.5|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein
hg19_v2_chr1_+_202431859_202431871	0.0237556	HOXC12_HOXD12	ENST00000391959.3|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000367270.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr19_+_38085768_38085874	0.0235368	HOXC12_HOXD12	ENST00000316433.4|ZNF540|ENSG00000171817.12|zinc finger protein 540 	ENST00000590588.1|ZNF540|ENSG00000171817.12|zinc finger protein 540 	ENST00000586134.1|ZNF540|ENSG00000171817.12|zinc finger protein 540 	ENST00000586792.1|ZNF540|ENSG00000171817.12|zinc finger protein 540
hg19_v2_chr14_+_88471468_88471500	0.0233447	HOXC12_HOXD12	ENST00000267549.3|GPR65|ENSG00000140030.4|G protein-coupled receptor 65
hg19_v2_chr6_+_143447322_143447387	0.0230036	HOXC12_HOXD12	ENST00000458219.1|AIG1|ENSG00000146416.12|androgen-induced 1
hg19_v2_chr17_-_7232585_7232712	0.0225941	HOXC12_HOXD12	ENST00000571887.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000315614.7|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000399464.2|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000570460.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4
hg19_v2_chr4_-_95264008_95264035	0.0219127	HOXC12_HOXD12	ENST00000295256.5|HPGDS|ENSG00000163106.6|hematopoietic prostaglandin D synthase
hg19_v2_chr2_-_237416181_237416233	0.0216609	HOXC12_HOXD12	ENST00000409907.3|IQCA1|ENSG00000132321.12|IQ motif containing with AAA domain 1
hg19_v2_chr2_-_201753980_201754026	0.0214587	HOXC12_HOXD12	ENST00000443398.1|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3 	ENST00000286175.8|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3 	ENST00000409449.1|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3
hg19_v2_chr2_-_100721923_100722045	0.0210666	HOXC12_HOXD12	ENST00000356421.2|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3
hg19_v2_chr3_+_16306837_16306973	0.0209238	HOXC12_HOXD12	ENST00000606098.1|OXNAD1|ENSG00000154814.9|oxidoreductase NAD-binding domain containing 1
hg19_v2_chr7_+_80275621_80275648	0.0208973	HOXC12_HOXD12	ENST00000426978.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor) 	ENST00000432207.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chrX_-_132231123_132231140	0.0208527	HOXC12_HOXD12	ENST00000511190.1|USP26|ENSG00000134588.8|ubiquitin specific peptidase 26
hg19_v2_chr5_-_175612149_175612227	0.0205462	HOXC12_HOXD12	ENST00000515403.1|RP11-844P9.2|ENSG00000248596.2|RP11-844P9.2
hg19_v2_chr9_-_26892765_26892822	0.0202817	HOXC12_HOXD12	ENST00000520187.1|CAAP1|ENSG00000120159.7|caspase activity and apoptosis inhibitor 1 	ENST00000333916.5|CAAP1|ENSG00000120159.7|caspase activity and apoptosis inhibitor 1
hg19_v2_chr11_-_18063973_18063973	0.0198884	HOXC12_HOXD12	ENST00000528338.1|TPH1|ENSG00000129167.5|tryptophan hydroxylase 1
hg19_v2_chr15_-_66797172_66797221	0.0192038	HOXC12_HOXD12	ENST00000569438.1|RPL4|ENSG00000174444.10|ribosomal protein L4 	ENST00000569696.1|RPL4|ENSG00000174444.10|ribosomal protein L4 	ENST00000307961.6|RPL4|ENSG00000174444.10|ribosomal protein L4
hg19_v2_chr7_+_149535455_149535555	0.0189802	HOXC12_HOXD12	ENST00000223210.4|ZNF862|ENSG00000106479.6|zinc finger protein 862 	ENST00000460379.1|ZNF862|ENSG00000106479.6|zinc finger protein 862
hg19_v2_chr4_+_70146217_70146217	0.0188675	HOXC12_HOXD12	ENST00000335568.5|UGT2B28|ENSG00000135226.12|UDP glucuronosyltransferase 2 family, polypeptide B28 	ENST00000511240.1|UGT2B28|ENSG00000135226.12|UDP glucuronosyltransferase 2 family, polypeptide B28
hg19_v2_chr19_+_7745708_7745765	0.01877	HOXC12_HOXD12	ENST00000596148.1|TRAPPC5|ENSG00000181029.7|trafficking protein particle complex 5 	ENST00000317378.5|TRAPPC5|ENSG00000181029.7|trafficking protein particle complex 5 	ENST00000426877.2|TRAPPC5|ENSG00000181029.7|trafficking protein particle complex 5
hg19_v2_chrX_+_70503433_70503517	0.0187354	HOXC12_HOXD12	ENST00000276079.8|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373856.3|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373841.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000420903.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding
hg19_v2_chr6_+_133561725_133561741	0.0183112	HOXC12_HOXD12	ENST00000452339.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chr14_-_35591156_35591234	0.0178256	HOXC12_HOXD12	ENST00000554361.1|PPP2R3C|ENSG00000092020.6|protein phosphatase 2, regulatory subunit B'', gamma
hg19_v2_chr3_-_98241598_98241696	0.0177802	HOXC12_HOXD12	ENST00000513287.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000514537.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000508071.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000507944.1|CLDND1|ENSG00000080822.12|claudin domain containing 1
hg19_v2_chr18_-_3880051_3880135	0.0177056	HOXC12_HOXD12	ENST00000584874.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr7_-_27702455_27702632	0.0176106	HOXC12_HOXD12	ENST00000265395.2|HIBADH|ENSG00000106049.4|3-hydroxyisobutyrate dehydrogenase
hg19_v2_chr7_+_154720173_154720243	0.0173842	HOXC12_HOXD12	ENST00000397551.2|PAXIP1-AS2|ENSG00000214106.3|PAXIP1 antisense RNA 2
hg19_v2_chr12_-_76879852_76879888	0.0173282	HOXC12_HOXD12	ENST00000548341.1|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8
hg19_v2_chr4_-_148605265_148605381	0.0168086	HOXC12_HOXD12	ENST00000541232.1|PRMT10|ENSG00000164169.8|protein arginine methyltransferase 10 (putative) 	ENST00000322396.6|PRMT10|ENSG00000164169.8|protein arginine methyltransferase 10 (putative)
hg19_v2_chr4_-_111119804_111119832	0.0167686	HOXC12_HOXD12	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr19_-_23941680_23941704	0.0164852	HOXC12_HOXD12	ENST00000402377.3|ZNF681|ENSG00000196172.8|zinc finger protein 681
hg19_v2_chr10_-_74856608_74856732	0.0162987	HOXC12_HOXD12	ENST00000307116.2|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I 	ENST00000373008.2|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I 	ENST00000412021.2|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I 	ENST00000394890.2|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I 	ENST00000263556.3|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I 	ENST00000440381.1|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I
hg19_v2_chr1_-_47407136_47407154	0.0160866	HOXC12_HOXD12	ENST00000462347.1|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11 	ENST00000371905.1|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11 	ENST00000310638.4|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11
hg19_v2_chr12_+_122880045_122880153	0.0157868	HOXC12_HOXD12	ENST00000539034.1|RP11-450K4.1|ENSG00000257097.1|RP11-450K4.1	ENST00000535976.1|RP11-450K4.1|ENSG00000257097.1|RP11-450K4.1
hg19_v2_chr14_+_23776167_23776189	0.0157376	HOXC12_HOXD12	ENST00000554635.1|BCL2L2|ENSG00000129473.5|BCL2-like 2 	ENST00000557008.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough
hg19_v2_chr10_-_129691195_129691212	0.0156812	HOXC12_HOXD12	ENST00000368671.3|CLRN3|ENSG00000180745.4|clarin 3
hg19_v2_chr16_-_12897642_12897874	0.0131311	HOXC12_HOXD12	ENST00000433677.2|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1 	ENST00000261660.4|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1 	ENST00000381774.4|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1
hg19_v2_chr19_+_21579958_21579975	0.0131112	HOXC12_HOXD12	ENST00000339914.6|ZNF493|ENSG00000196268.7|zinc finger protein 493 	ENST00000599461.1|ZNF493|ENSG00000196268.7|zinc finger protein 493
hg19_v2_chr5_-_146781153_146781188	0.0129072	HOXC12_HOXD12	ENST00000520473.1|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr17_-_10600818_10600885	0.012621	HOXC12_HOXD12	ENST00000577427.1|SCO1|ENSG00000133028.6|SCO1 cytochrome c oxidase assembly protein 	ENST00000255390.5|SCO1|ENSG00000133028.6|SCO1 cytochrome c oxidase assembly protein
hg19_v2_chr2_-_177502254_177502360	0.0125337	HOXC12_HOXD12	ENST00000339037.3|AC017048.3|ENSG00000163364.5|long intergenic non-protein coding RNA 1116
hg19_v2_chr3_+_40566369_40566400	0.0124346	HOXC12_HOXD12	ENST00000403205.2|ZNF621|ENSG00000172888.7|zinc finger protein 621 	ENST00000310898.1|ZNF621|ENSG00000172888.7|zinc finger protein 621 	ENST00000339296.5|ZNF621|ENSG00000172888.7|zinc finger protein 621 	ENST00000431278.1|ZNF621|ENSG00000172888.7|zinc finger protein 621
hg19_v2_chr3_-_196911002_196911116	0.0114732	HOXC12_HOXD12	ENST00000452595.1|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila)
hg19_v2_chr2_+_27435179_27435240	0.00995909	HOXC12_HOXD12	ENST00000606999.1|ATRAID|ENSG00000138085.12|all-trans retinoic acid-induced differentiation factor 	ENST00000405489.3|ATRAID|ENSG00000138085.12|all-trans retinoic acid-induced differentiation factor
hg19_v2_chr2_+_170335924_170336039	0.00962005	HOXC12_HOXD12	ENST00000554017.1|BBS5|ENSG00000163093.7|Bardet-Biedl syndrome 5 	ENST00000513963.1|RP11-724O16.1|ENSG00000251569.1|Bardet-Biedl syndrome 5 protein; Uncharacterized protein  	ENST00000392663.2|BBS5|ENSG00000163093.7|Bardet-Biedl syndrome 5
hg19_v2_chrX_+_70503526_70503611	0.00957728	HOXC12_HOXD12	ENST00000413858.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000450092.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding
hg19_v2_chrX_-_48958043_48958059	0.00948474	HOXC12_HOXD12	ENST00000356463.3|WDR45|ENSG00000196998.11|WD repeat domain 45
hg19_v2_chr11_-_32457075_32457095	0.0088653	HOXC12_HOXD12	ENST00000448076.3|WT1|ENSG00000184937.8|Wilms tumor 1
hg19_v2_chr9_-_96108696_96108730	0.00883895	HOXC12_HOXD12	ENST00000375419.1|C9orf129|ENSG00000204352.2|chromosome 9 open reading frame 129
hg19_v2_chr2_+_228336849_228336904	0.00854803	HOXC12_HOXD12	ENST00000409979.2|AGFG1|ENSG00000173744.13|ArfGAP with FG repeats 1 	ENST00000310078.8|AGFG1|ENSG00000173744.13|ArfGAP with FG repeats 1
hg19_v2_chr22_-_28490123_28490123	0.00846077	HOXC12_HOXD12	ENST00000442232.1|TTC28|ENSG00000100154.10|tetratricopeptide repeat domain 28
hg19_v2_chrX_+_153775821_153775864	0.0083715	HOXC12_HOXD12	ENST00000263518.6|IKBKG|ENSG00000073009.8|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma 	ENST00000470142.1|IKBKG|ENSG00000073009.8|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma 	ENST00000393549.2|IKBKG|ENSG00000073009.8|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma 	ENST00000455588.2|IKBKG|ENSG00000073009.8|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma 	ENST00000369602.3|IKBKG|ENSG00000073009.8|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
hg19_v2_chr13_-_28545276_28545276	0.00809612	HOXC12_HOXD12	ENST00000381020.7|CDX2|ENSG00000165556.9|caudal type homeobox 2
hg19_v2_chr10_-_27443294_27443321	0.00721326	HOXC12_HOXD12	ENST00000396296.3|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase 	ENST00000375972.3|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase 	ENST00000376016.3|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase 	ENST00000491542.2|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase
hg19_v2_chr12_+_108525517_108525531	0.00716792	HOXC12_HOXD12	ENST00000332082.4|WSCD2|ENSG00000075035.5|WSC domain containing 2
hg19_v2_chr19_+_21264980_21265026	0.00684845	HOXC12_HOXD12	ENST00000596053.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000597086.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000596143.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000596367.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000601416.1|ZNF714|ENSG00000160352.11|zinc finger protein 714
hg19_v2_chr6_-_137365402_137365416	0.00632205	HOXC12_HOXD12	ENST00000541547.1|IL20RA|ENSG00000016402.8|interleukin 20 receptor, alpha
hg19_v2_chr19_+_15838834_15838834	0.00602298	HOXC12_HOXD12	ENST00000305899.3|OR10H2|ENSG00000171942.3|olfactory receptor, family 10, subfamily H, member 2
hg19_v2_chr22_-_39928823_39928860	0.00584943	HOXC12_HOXD12	ENST00000334678.3|RPS19BP1|ENSG00000187051.4|ribosomal protein S19 binding protein 1
hg19_v2_chr8_+_33613265_33613295	0.00548985	HOXC12_HOXD12	ENST00000517292.1|RP11-317N12.1|ENSG00000253642.1|RP11-317N12.1
hg19_v2_chr9_-_95166884_95166908	0.00474687	HOXC12_HOXD12	ENST00000375561.5|OGN|ENSG00000106809.6|osteoglycin
hg19_v2_chr15_-_54267147_54267170	0.00461056	HOXC12_HOXD12	ENST00000558866.1|RP11-643A5.2|ENSG00000259669.1|RP11-643A5.2	ENST00000558920.1|RP11-643A5.2|ENSG00000259669.1|RP11-643A5.2
hg19_v2_chr3_+_50606901_50606967	0.00426174	HOXC12_HOXD12	ENST00000455834.1|HEMK1|ENSG00000114735.5|HemK methyltransferase family member 1
hg19_v2_chr10_-_70287172_70287183	0.00406573	HOXC12_HOXD12	ENST00000539557.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr19_+_49496782_49496873	0.00388934	HOXC12_HOXD12	ENST00000601968.1|RUVBL2|ENSG00000183207.8|RuvB-like AAA ATPase 2 	ENST00000596837.1|RUVBL2|ENSG00000183207.8|RuvB-like AAA ATPase 2
hg19_v2_chr7_+_134331550_134331593	0.00366152	HOXC12_HOXD12	ENST00000344924.3|BPGM|ENSG00000172331.7|2,3-bisphosphoglycerate mutase 	ENST00000418040.1|BPGM|ENSG00000172331.7|2,3-bisphosphoglycerate mutase 	ENST00000393132.2|BPGM|ENSG00000172331.7|2,3-bisphosphoglycerate mutase
hg19_v2_chr20_+_5931497_5931592	0.00357372	HOXC12_HOXD12	ENST00000378886.2|MCM8|ENSG00000125885.9|minichromosome maintenance complex component 8 	ENST00000265187.4|MCM8|ENSG00000125885.9|minichromosome maintenance complex component 8
hg19_v2_chr9_-_95166841_95166867	0.00293966	HOXC12_HOXD12	ENST00000262551.4|OGN|ENSG00000106809.6|osteoglycin
hg19_v2_chr17_+_18759612_18759689	0.00268883	HOXC12_HOXD12	ENST00000432893.2|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000414602.1|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000574522.1|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000570450.1|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000419071.2|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2
hg19_v2_chrY_+_2709906_2709961	0.00231782	HOXC12_HOXD12	ENST00000430575.1|RPS4Y1|ENSG00000129824.11|ribosomal protein S4, Y-linked 1
hg19_v2_chr1_-_173176452_173176477	0.00117243	HOXC12_HOXD12	ENST00000281834.3|TNFSF4|ENSG00000117586.6|tumor necrosis factor (ligand) superfamily, member 4
hg19_v2_chr11_-_67275542_67275562	0.00100528	HOXC12_HOXD12	ENST00000531506.1|CDK2AP2|ENSG00000167797.3|cyclin-dependent kinase 2 associated protein 2
hg19_v2_chr12_-_71182695_71182762	0.000832165	HOXC12_HOXD12	ENST00000342084.4|PTPRR|ENSG00000153233.8|protein tyrosine phosphatase, receptor type, R
hg19_v2_chr12_+_14956506_14956636	0.000781219	HOXC12_HOXD12	ENST00000330828.2|C12orf60|ENSG00000182993.3|chromosome 12 open reading frame 60
hg19_v2_chr1_-_155948890_155948955	0.000268711	HOXC12_HOXD12	ENST00000471589.1|ARHGEF2|ENSG00000116584.13|Rho/Rac guanine nucleotide exchange factor (GEF) 2
