hg19_v2_chr9_-_3469181_3469181	0.354456	HOXA4	ENST00000366116.2|AL365202.1|ENSG00000203286.4|Uncharacterized protein
hg19_v2_chr10_-_92681033_92681033	0.304649	HOXA4	ENST00000371697.3|ANKRD1|ENSG00000148677.6|ankyrin repeat domain 1 (cardiac muscle)
hg19_v2_chr2_-_187367356_187367356	0.286448	HOXA4	ENST00000595956.1|AC018867.2|ENSG00000268846.1|AC018867.2
hg19_v2_chr1_+_28586006_28586044	0.245407	HOXA4	ENST00000253063.3|SESN2|ENSG00000130766.4|sestrin 2
hg19_v2_chr10_-_101825151_101825200	0.224563	HOXA4	ENST00000441382.1|CPN1|ENSG00000120054.7|carboxypeptidase N, polypeptide 1
hg19_v2_chr21_+_17961006_17961038	0.197547	HOXA4	ENST00000602323.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr20_-_45976816_45976860	0.187897	HOXA4	ENST00000441977.1|ZMYND8|ENSG00000101040.15|zinc finger, MYND-type containing 8
hg19_v2_chr21_+_17909594_17909663	0.174642	HOXA4	ENST00000441820.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000602280.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr18_+_42260059_42260138	0.151365	HOXA4	ENST00000426838.4|SETBP1|ENSG00000152217.12|SET binding protein 1
hg19_v2_chrX_+_37639302_37639326	0.133908	HOXA4	ENST00000545017.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide 	ENST00000536160.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide
hg19_v2_chr19_+_45409011_45409069	0.131887	HOXA4	ENST00000252486.4|APOE|ENSG00000130203.5|apolipoprotein E 	ENST00000446996.1|APOE|ENSG00000130203.5|apolipoprotein E 	ENST00000434152.1|APOE|ENSG00000130203.5|apolipoprotein E
hg19_v2_chr14_+_38065052_38065052	0.128969	HOXA4	ENST00000556845.1|TTC6|ENSG00000139865.12|tetratricopeptide repeat domain 6
hg19_v2_chr14_-_83262540_83262572	0.128727	HOXA4	ENST00000554451.1|RP11-11K13.1|ENSG00000258683.1|RP11-11K13.1
hg19_v2_chr1_-_204329013_204329086	0.126586	HOXA4	ENST00000272203.3|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6 	ENST00000414478.1|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6
hg19_v2_chr3_-_52486841_52486882	0.124208	HOXA4	ENST00000496590.1|TNNC1|ENSG00000114854.3|troponin C type 1 (slow)
hg19_v2_chr2_+_171571827_171571861	0.121359	HOXA4	ENST00000375281.3|SP5|ENSG00000204335.3|Sp5 transcription factor
hg19_v2_chr5_+_60933634_60933637	0.115736	HOXA4	ENST00000505642.1|C5orf64|ENSG00000178722.8|chromosome 5 open reading frame 64
hg19_v2_chr5_+_49962495_49962577	0.115146	HOXA4	ENST00000515175.1|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8
hg19_v2_chr17_+_37894570_37894614	0.113543	HOXA4	ENST00000394211.3|GRB7|ENSG00000141738.9|growth factor receptor-bound protein 7
hg19_v2_chr5_+_49962772_49962815	0.113276	HOXA4	ENST00000281631.5|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000513738.1|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000503665.1|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000514067.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000503046.1|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8
hg19_v2_chr20_+_53092232_53092279	0.110196	HOXA4	ENST00000395939.1|DOK5|ENSG00000101134.7|docking protein 5
hg19_v2_chr5_+_66254698_66254885	0.107098	HOXA4	ENST00000405643.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4 	ENST00000407621.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4 	ENST00000432426.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chrX_+_129473859_129473904	0.102536	HOXA4	ENST00000424447.1|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14
hg19_v2_chr11_+_112046190_112046245	0.102394	HOXA4	ENST00000357685.5|BCO2|ENSG00000197580.7|beta-carotene oxygenase 2 	ENST00000393032.2|BCO2|ENSG00000197580.7|beta-carotene oxygenase 2 	ENST00000361053.4|BCO2|ENSG00000197580.7|beta-carotene oxygenase 2
hg19_v2_chr12_+_54447637_54447661	0.0972074	HOXA4	ENST00000609810.1|HOXC4|ENSG00000198353.6|homeobox C4 	ENST00000430889.2|HOXC4|ENSG00000273266.1|Homeobox protein Hox-C4
hg19_v2_chr16_+_57728701_57728748	0.0966615	HOXA4	ENST00000569375.1|CCDC135|ENSG00000159625.10|coiled-coil domain containing 135 	ENST00000360716.3|CCDC135|ENSG00000159625.10|coiled-coil domain containing 135 	ENST00000569167.1|CCDC135|ENSG00000159625.10|coiled-coil domain containing 135 	ENST00000394337.4|CCDC135|ENSG00000159625.10|coiled-coil domain containing 135 	ENST00000563126.1|CCDC135|ENSG00000159625.10|coiled-coil domain containing 135 	ENST00000336825.8|CCDC135|ENSG00000159625.10|coiled-coil domain containing 135
hg19_v2_chr10_+_77056134_77056153	0.0919488	HOXA4	ENST00000528121.1|ZNF503-AS1|ENSG00000226051.2|ZNF503 antisense RNA 1 	ENST00000416398.1|ZNF503-AS1|ENSG00000226051.2|ZNF503 antisense RNA 1
hg19_v2_chr20_+_53092123_53092149	0.09159	HOXA4	ENST00000262593.5|DOK5|ENSG00000101134.7|docking protein 5
hg19_v2_chr15_+_86087267_86087274	0.0890695	HOXA4	ENST00000558166.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr12_+_72058130_72058261	0.0887383	HOXA4	ENST00000547843.1|THAP2|ENSG00000173451.2|THAP domain containing, apoptosis associated protein 2
hg19_v2_chr2_+_177015950_177015950	0.0863217	HOXA4	ENST00000306324.3|HOXD4|ENSG00000170166.5|homeobox D4
hg19_v2_chr7_-_27170352_27170418	0.0847987	HOXA4	ENST00000428284.2|HOXA4|ENSG00000197576.9|homeobox A4 	ENST00000360046.5|HOXA4|ENSG00000197576.9|homeobox A4
hg19_v2_chr15_+_75080883_75080890	0.0792668	HOXA4	ENST00000567571.1|CSK|ENSG00000103653.12|c-src tyrosine kinase
hg19_v2_chr6_-_26235206_26235224	0.0746931	HOXA4	ENST00000244534.5|HIST1H1D|ENSG00000124575.5|histone cluster 1, H1d
hg19_v2_chr9_+_26746951_26747110	0.0729827	HOXA4	ENST00000523363.1|RP11-18A15.1|ENSG00000254261.1|RP11-18A15.1
hg19_v2_chr18_-_658244_658340	0.070408	HOXA4	ENST00000585033.1|C18orf56|ENSG00000176912.3|chromosome 18 open reading frame 56 	ENST00000323813.3|C18orf56|ENSG00000176912.3|chromosome 18 open reading frame 56
hg19_v2_chrX_-_84634737_84634754	0.0694045	HOXA4	ENST00000262753.4|POF1B|ENSG00000124429.13|premature ovarian failure, 1B
hg19_v2_chr5_+_133562095_133562118	0.069292	HOXA4	ENST00000602919.1|CTD-2410N18.3|ENSG00000270177.1|CTD-2410N18.3
hg19_v2_chr6_+_63921351_63921386	0.0668617	HOXA4	ENST00000370659.1|FKBP1C|ENSG00000198225.4|FK506 binding protein 1C
hg19_v2_chr11_-_27494279_27494308	0.0667749	HOXA4	ENST00000379214.4|LGR4|ENSG00000205213.9|leucine-rich repeat containing G protein-coupled receptor 4
hg19_v2_chrX_+_37639264_37639290	0.0667438	HOXA4	ENST00000378588.4|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide
hg19_v2_chr12_+_29376673_29376683	0.066011	HOXA4	ENST00000547116.1|FAR2|ENSG00000064763.6|fatty acyl CoA reductase 2
hg19_v2_chr21_+_17443521_17443553	0.064349	HOXA4	ENST00000456342.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr1_-_108231101_108231133	0.0642118	HOXA4	ENST00000544443.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000415432.2|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr3_+_69134124_69134200	0.0639574	HOXA4	ENST00000478935.1|ARL6IP5|ENSG00000144746.6|ADP-ribosylation-like factor 6 interacting protein 5
hg19_v2_chr10_-_106240032_106240047	0.0637	HOXA4	ENST00000447860.1|RP11-127O4.3|ENSG00000225768.1|RP11-127O4.3
hg19_v2_chr11_-_27494309_27494328	0.0635666	HOXA4	ENST00000389858.4|LGR4|ENSG00000205213.9|leucine-rich repeat containing G protein-coupled receptor 4
hg19_v2_chr3_-_64253655_64253799	0.0618124	HOXA4	ENST00000498162.1|PRICKLE2|ENSG00000163637.7|prickle homolog 2 (Drosophila)
hg19_v2_chr12_+_29376592_29376620	0.0595476	HOXA4	ENST00000182377.4|FAR2|ENSG00000064763.6|fatty acyl CoA reductase 2
hg19_v2_chr9_-_113342160_113342214	0.057293	HOXA4	ENST00000401783.2|SVEP1|ENSG00000165124.13|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 	ENST00000374461.1|SVEP1|ENSG00000165124.13|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
hg19_v2_chr18_-_24128496_24128554	0.0568139	HOXA4	ENST00000417602.1|KCTD1|ENSG00000134504.8|potassium channel tetramerization domain containing 1
hg19_v2_chr12_-_68845165_68845371	0.0546051	HOXA4	ENST00000360485.3|RP11-81H14.2|ENSG00000251301.2|RP11-81H14.2	ENST00000441255.2|RP11-81H14.2|ENSG00000251301.2|RP11-81H14.2
hg19_v2_chr2_-_43453734_43453751	0.052631	HOXA4	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr21_+_17443434_17443515	0.0521747	HOXA4	ENST00000400178.2|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr17_+_54230819_54230871	0.0514781	HOXA4	ENST00000318698.2|ANKFN1|ENSG00000153930.6|ankyrin-repeat and fibronectin type III domain containing 1 	ENST00000566473.2|ANKFN1|ENSG00000153930.6|ankyrin-repeat and fibronectin type III domain containing 1
hg19_v2_chr17_-_67138015_67138062	0.0514525	HOXA4	ENST00000284425.2|ABCA6|ENSG00000154262.8|ATP-binding cassette, sub-family A (ABC1), member 6 	ENST00000590645.1|ABCA6|ENSG00000154262.8|ATP-binding cassette, sub-family A (ABC1), member 6
hg19_v2_chr19_-_42806919_42806958	0.050654	HOXA4	ENST00000595530.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) 	ENST00000538771.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) 	ENST00000601865.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr12_-_86650077_86650095	0.0471227	HOXA4	ENST00000552808.2|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENST00000547225.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr9_+_44867571_44867571	0.0458633	HOXA4	ENST00000377548.2|RP11-160N1.10|ENSG00000204814.5|RP11-160N1.10
hg19_v2_chr14_-_80697396_80697402	0.0449184	HOXA4	ENST00000557010.1|DIO2|ENSG00000211448.7|deiodinase, iodothyronine, type II
hg19_v2_chr3_-_120400960_120401030	0.0439813	HOXA4	ENST00000476082.2|HGD|ENSG00000113924.7|homogentisate 1,2-dioxygenase
hg19_v2_chr5_+_66300464_66300505	0.0435837	HOXA4	ENST00000436277.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr14_+_39734482_39734542	0.041247	HOXA4	ENST00000554392.1|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000555716.1|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000341749.3|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000557038.1|CTAGE5|ENSG00000150527.12|CTAGE family, member 5
hg19_v2_chr12_+_53848549_53848644	0.0409868	HOXA4	ENST00000439930.3|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000548933.1|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000562264.1|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2
hg19_v2_chr3_+_9774164_9774185	0.03942	HOXA4	ENST00000426583.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1
hg19_v2_chr9_-_113761720_113761756	0.0393871	HOXA4	ENST00000541779.1|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1 	ENST00000374430.2|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr9_-_113341985_113342040	0.0376662	HOXA4	ENST00000374469.1|SVEP1|ENSG00000165124.13|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
hg19_v2_chr5_-_38557561_38557574	0.0373582	HOXA4	ENST00000511561.1|LIFR|ENSG00000113594.5|leukemia inhibitory factor receptor alpha
hg19_v2_chr1_+_26348259_26348276	0.0365133	HOXA4	ENST00000374280.3|EXTL1|ENSG00000158008.5|exostosin-like glycosyltransferase 1
hg19_v2_chr12_-_120241187_120241310	0.035432	HOXA4	ENST00000392520.2|CIT|ENSG00000122966.9|citron (rho-interacting, serine/threonine kinase 21)
hg19_v2_chr5_+_159343688_159343790	0.0347234	HOXA4	ENST00000306675.3|ADRA1B|ENSG00000170214.3|adrenoceptor alpha 1B
hg19_v2_chrM_+_5824_5904	0.0339158	HOXA4	ENST00000361624.2|MT-CO1|ENSG00000198804.2|mitochondrially encoded cytochrome c oxidase I
hg19_v2_chr15_-_33447055_33447241	0.0334695	HOXA4	ENST00000559047.1|FMN1|ENSG00000248905.4|formin 1 	ENST00000561249.1|FMN1|ENSG00000248905.4|formin 1
hg19_v2_chr12_+_53848505_53848532	0.0333325	HOXA4	ENST00000552819.1|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000455667.3|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2
hg19_v2_chr6_+_31514622_31514647	0.0323912	HOXA4	ENST00000376146.4|NFKBIL1|ENSG00000204498.6|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1
hg19_v2_chrX_+_123097014_123097033	0.0320866	HOXA4	ENST00000394478.1|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chr8_+_22424551_22424585	0.0319586	HOXA4	ENST00000523348.1|SORBS3|ENSG00000120896.9|sorbin and SH3 domain containing 3
hg19_v2_chr2_+_53994927_53994979	0.0319237	HOXA4	ENST00000295304.4|CHAC2|ENSG00000143942.4|ChaC, cation transport regulator homolog 2 (E. coli)
hg19_v2_chr12_-_57037284_57037374	0.0315502	HOXA4	ENST00000551570.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
hg19_v2_chr18_-_21017817_21017948	0.0309304	HOXA4	ENST00000542162.1|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000383233.3|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000582336.1|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000450466.2|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000578520.1|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000399707.1|TMEM241|ENSG00000134490.9|transmembrane protein 241
hg19_v2_chr10_-_105845536_105845581	0.0291487	HOXA4	ENST00000393211.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chr10_-_105845674_105845760	0.0277688	HOXA4	ENST00000353479.5|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1 	ENST00000369733.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chr11_+_120971882_120971882	0.0265333	HOXA4	ENST00000392793.1|TECTA|ENSG00000109927.5|tectorin alpha
hg19_v2_chr21_+_17442799_17442853	0.0265213	HOXA4	ENST00000602580.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000458468.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000602935.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr7_+_141418962_141418962	0.0257362	HOXA4	ENST00000493845.1|WEE2|ENSG00000214102.3|WEE1 homolog 2 (S. pombe)
hg19_v2_chrX_+_149867681_149867743	0.0250707	HOXA4	ENST00000438018.1|MTMR1|ENSG00000063601.12|myotubularin related protein 1 	ENST00000436701.1|MTMR1|ENSG00000063601.12|myotubularin related protein 1
hg19_v2_chr14_+_45605127_45605155	0.0240928	HOXA4	ENST00000556036.1|FANCM|ENSG00000187790.6|Fanconi anemia, complementation group M 	ENST00000267430.5|FANCM|ENSG00000187790.6|Fanconi anemia, complementation group M
hg19_v2_chr5_+_140535577_140535577	0.0227426	HOXA4	ENST00000539533.1|PCDHB17|ENSG00000255622.1|Protocadherin-psi1; Uncharacterized protein
hg19_v2_chr8_+_77593474_77593612	0.0226885	HOXA4	ENST00000455469.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4 	ENST00000050961.6|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr5_+_69321074_69321200	0.0225038	HOXA4	ENST00000380751.5|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000380750.3|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000503931.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000506542.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric)
hg19_v2_chr22_+_26138108_26138201	0.0224716	HOXA4	ENST00000536101.1|MYO18B|ENSG00000133454.11|myosin XVIIIB 	ENST00000335473.7|MYO18B|ENSG00000133454.11|myosin XVIIIB 	ENST00000407587.2|MYO18B|ENSG00000133454.11|myosin XVIIIB
hg19_v2_chr4_-_66536057_66536071	0.0223409	HOXA4	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr7_-_140714430_140714493	0.0212831	HOXA4	ENST00000393008.3|MRPS33|ENSG00000090263.11|mitochondrial ribosomal protein S33
hg19_v2_chr1_-_156460391_156460417	0.0191463	HOXA4	ENST00000360595.3|MEF2D|ENSG00000116604.13|myocyte enhancer factor 2D
hg19_v2_chr2_-_163100045_163100071	0.0191271	HOXA4	ENST00000188790.4|FAP|ENSG00000078098.9|fibroblast activation protein, alpha
hg19_v2_chr8_+_77593448_77593471	0.0191243	HOXA4	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr20_+_32150140_32150230	0.0185663	HOXA4	ENST00000344201.3|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000346541.3|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000397800.1|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000397798.2|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000492345.1|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg19_v2_chr6_-_116447283_116447325	0.0178824	HOXA4	ENST00000452729.1|COL10A1|ENSG00000123500.5|collagen, type X, alpha 1 	ENST00000243222.4|COL10A1|ENSG00000123500.5|collagen, type X, alpha 1
hg19_v2_chr18_-_53019208_53019228	0.0177934	HOXA4	ENST00000562607.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr2_-_180427304_180427323	0.0170739	HOXA4	ENST00000336917.5|ZNF385B|ENSG00000144331.14|zinc finger protein 385B
hg19_v2_chr18_-_28742813_28742824	0.0163152	HOXA4	ENST00000257197.3|DSC1|ENSG00000134765.5|desmocollin 1 	ENST00000257198.5|DSC1|ENSG00000134765.5|desmocollin 1
hg19_v2_chrX_-_55024967_55024985	0.0156983	HOXA4	ENST00000545676.1|PFKFB1|ENSG00000158571.6|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
hg19_v2_chr18_-_53089723_53089786	0.0149836	HOXA4	ENST00000561992.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000562512.2|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr19_-_1021113_1021149	0.0143486	HOXA4	ENST00000333175.5|TMEM259|ENSG00000182087.8|transmembrane protein 259 	ENST00000356663.3|TMEM259|ENSG00000182087.8|transmembrane protein 259
hg19_v2_chr4_-_185139062_185139114	0.0136436	HOXA4	ENST00000296741.2|ENPP6|ENSG00000164303.6|ectonucleotide pyrophosphatase/phosphodiesterase 6
hg19_v2_chr17_-_2117600_2117643	0.0135326	HOXA4	ENST00000572369.1|SMG6|ENSG00000070366.9|SMG6 nonsense mediated mRNA decay factor
hg19_v2_chr5_+_140810132_140810214	0.0128676	HOXA4	ENST00000252085.3|PCDHGA12|ENSG00000253159.1|protocadherin gamma subfamily A, 12
hg19_v2_chr19_-_51220176_51220195	0.0126414	HOXA4	ENST00000359082.3|SHANK1|ENSG00000161681.11|SH3 and multiple ankyrin repeat domains 1 	ENST00000293441.1|SHANK1|ENSG00000161681.11|SH3 and multiple ankyrin repeat domains 1
hg19_v2_chr1_-_42384343_42384380	0.0125814	HOXA4	ENST00000372584.1|HIVEP3|ENSG00000127124.9|human immunodeficiency virus type I enhancer binding protein 3
hg19_v2_chr15_+_51669444_51669479	0.0123137	HOXA4	ENST00000396399.2|GLDN|ENSG00000186417.9|gliomedin
hg19_v2_chr11_+_128563948_128564003	0.0121913	HOXA4	ENST00000534087.2|FLI1|ENSG00000151702.12|Fli-1 proto-oncogene, ETS transcription factor
hg19_v2_chr20_+_57464200_57464215	0.0110686	HOXA4	ENST00000604005.1|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr3_-_57233966_57234014	0.0109978	HOXA4	ENST00000473921.1|HESX1|ENSG00000163666.4|HESX homeobox 1 	ENST00000295934.3|HESX1|ENSG00000163666.4|HESX homeobox 1
hg19_v2_chr12_+_106976678_106976708	0.0107613	HOXA4	ENST00000392842.1|RFX4|ENSG00000111783.8|regulatory factor X, 4 (influences HLA class II expression)
hg19_v2_chr10_-_62332357_62332428	0.0101618	HOXA4	ENST00000503366.1|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr14_+_45605157_45605186	0.0100486	HOXA4	ENST00000542564.2|FANCM|ENSG00000187790.6|Fanconi anemia, complementation group M
hg19_v2_chr7_+_18330035_18330050	0.00956165	HOXA4	ENST00000413509.2|HDAC9|ENSG00000048052.17|histone deacetylase 9
hg19_v2_chr6_+_100054606_100054606	0.00820715	HOXA4	ENST00000369215.4|PRDM13|ENSG00000112238.11|PR domain containing 13
hg19_v2_chr2_+_39117010_39117021	0.00792017	HOXA4	ENST00000409978.1|ARHGEF33|ENSG00000214694.6|Rho guanine nucleotide exchange factor (GEF) 33
hg19_v2_chr5_+_67586465_67586534	0.00786423	HOXA4	ENST00000336483.5|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr14_+_37131058_37131139	0.0075534	HOXA4	ENST00000361487.6|PAX9|ENSG00000198807.8|paired box 9
hg19_v2_chr3_+_122103014_122103088	0.00723846	HOXA4	ENST00000232125.5|FAM162A|ENSG00000114023.11|family with sequence similarity 162, member A 	ENST00000477892.1|FAM162A|ENSG00000114023.11|family with sequence similarity 162, member A 	ENST00000469967.1|FAM162A|ENSG00000114023.11|family with sequence similarity 162, member A
hg19_v2_chr4_-_41884582_41884593	0.0069594	HOXA4	ENST00000499082.2|LINC00682|ENSG00000245870.2|long intergenic non-protein coding RNA 682
hg19_v2_chr1_-_216978709_216978728	0.00693673	HOXA4	ENST00000360012.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr7_-_130598059_130598070	0.00689824	HOXA4	ENST00000432045.2|MIR29B1|ENSG00000226380.3|microRNA 29a
hg19_v2_chr19_-_10047219_10047235	0.00615472	HOXA4	ENST00000264833.4|OLFM2|ENSG00000105088.4|olfactomedin 2
hg19_v2_chr5_+_152870734_152870857	0.00611063	HOXA4	ENST00000521843.2|GRIA1|ENSG00000155511.13|glutamate receptor, ionotropic, AMPA 1
hg19_v2_chr14_+_59100774_59100799	0.00610072	HOXA4	ENST00000556859.1|DACT1|ENSG00000165617.10|dishevelled-binding antagonist of beta-catenin 1 	ENST00000421793.1|DACT1|ENSG00000165617.10|dishevelled-binding antagonist of beta-catenin 1
hg19_v2_chr14_-_54423529_54423552	0.00552317	HOXA4	ENST00000245451.4|BMP4|ENSG00000125378.11|bone morphogenetic protein 4 	ENST00000559087.1|BMP4|ENSG00000125378.11|bone morphogenetic protein 4
hg19_v2_chr4_-_66536196_66536216	0.00521152	HOXA4	ENST00000511294.1|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr10_+_11047259_11047351	0.00498997	HOXA4	ENST00000379261.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000416382.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr1_+_151739131_151739177	0.00478586	HOXA4	ENST00000400999.1|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3
hg19_v2_chr1_+_160160283_160160292	0.00465104	HOXA4	ENST00000368079.3|CASQ1|ENSG00000143318.8|calsequestrin 1 (fast-twitch, skeletal muscle)
hg19_v2_chr18_-_56985776_56985815	0.00382434	HOXA4	ENST00000587244.1|CPLX4|ENSG00000166569.4|complexin 4
hg19_v2_chr8_+_79503458_79503473	0.00354604	HOXA4	ENST00000518467.1|PKIA|ENSG00000171033.8|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg19_v2_chr9_+_87284622_87284653	0.00349877	HOXA4	ENST00000395882.1|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2
hg19_v2_chr9_+_87284675_87284698	0.00317647	HOXA4	ENST00000376208.1|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2 	ENST00000304053.6|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2 	ENST00000277120.3|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2
hg19_v2_chr1_+_214161272_214161322	0.00313228	HOXA4	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr11_+_22688150_22688192	0.00275089	HOXA4	ENST00000454584.2|GAS2|ENSG00000148935.6|growth arrest-specific 2
hg19_v2_chr1_-_159832438_159832449	0.00253089	HOXA4	ENST00000368100.1|VSIG8|ENSG00000243284.1|V-set and immunoglobulin domain containing 8
hg19_v2_chr17_+_73452545_73452685	0.00174399	HOXA4	ENST00000314256.7|KIAA0195|ENSG00000177728.10|KIAA0195
hg19_v2_chr2_+_128403439_128403578	0.00167743	HOXA4	ENST00000544369.1|GPR17|ENSG00000144230.12|G protein-coupled receptor 17
hg19_v2_chr5_+_40909354_40909354	0.0014127	HOXA4	ENST00000313164.9|C7|ENSG00000112936.14|complement component 7
hg19_v2_chr1_+_160160346_160160401	0.00123367	HOXA4	ENST00000368078.3|CASQ1|ENSG00000143318.8|calsequestrin 1 (fast-twitch, skeletal muscle)
hg19_v2_chr7_+_95115210_95115217	0.000206902	HOXA4	ENST00000428113.1|ASB4|ENSG00000005981.8|ankyrin repeat and SOCS box containing 4 	ENST00000325885.5|ASB4|ENSG00000005981.8|ankyrin repeat and SOCS box containing 4
hg19_v2_chr1_+_155658849_155658893	2.79416e-05	HOXA4	ENST00000368336.5|DAP3|ENSG00000132676.11|death associated protein 3 	ENST00000343043.3|DAP3|ENSG00000132676.11|death associated protein 3 	ENST00000421487.2|DAP3|ENSG00000132676.11|death associated protein 3 	ENST00000535183.1|DAP3|ENSG00000132676.11|death associated protein 3 	ENST00000465375.1|DAP3|ENSG00000132676.11|death associated protein 3 	ENST00000470830.1|DAP3|ENSG00000132676.11|death associated protein 3
