hg19_v2_chr3_+_159481988_159482005	0.254533	HOXA2_HOXB1	ENST00000472451.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr7_-_27170352_27170418	0.186305	HOXA2_HOXB1	ENST00000428284.2|HOXA4|ENSG00000197576.9|homeobox A4 	ENST00000360046.5|HOXA4|ENSG00000197576.9|homeobox A4
hg19_v2_chr21_-_43430440_43430496	0.146027	HOXA2_HOXB1	ENST00000398505.3|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21 	ENST00000310826.5|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21 	ENST00000449949.1|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21 	ENST00000398499.1|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21 	ENST00000398497.2|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21 	ENST00000398511.3|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21
hg19_v2_chrX_+_41583408_41583436	0.104141	HOXA2_HOXB1	ENST00000302548.4|GPR82|ENSG00000171657.5|G protein-coupled receptor 82
hg19_v2_chr6_+_32006042_32006084	0.103407	HOXA2_HOXB1	ENST00000418967.2|CYP21A2|ENSG00000231852.2|cytochrome P450, family 21, subfamily A, polypeptide 2
hg19_v2_chr12_+_21679220_21679252	0.0847687	HOXA2_HOXB1	ENST00000256969.2|C12orf39|ENSG00000134548.5|chromosome 12 open reading frame 39
hg19_v2_chr1_-_217804377_217804446	0.0836309	HOXA2_HOXB1	ENST00000366935.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2 	ENST00000366934.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2
hg19_v2_chrX_-_10645773_10645795	0.0783418	HOXA2_HOXB1	ENST00000453318.2|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome)
hg19_v2_chr8_+_23386557_23386576	0.076898	HOXA2_HOXB1	ENST00000523930.1|SLC25A37|ENSG00000147454.9|solute carrier family 25 (mitochondrial iron transporter), member 37
hg19_v2_chr3_+_150264555_150264592	0.0739593	HOXA2_HOXB1	ENST00000406576.3|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa 	ENST00000482093.1|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa 	ENST00000273435.5|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa
hg19_v2_chr3_+_150264458_150264481	0.0724096	HOXA2_HOXB1	ENST00000487799.1|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa 	ENST00000460851.1|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa
hg19_v2_chr16_+_85936295_85936444	0.0723467	HOXA2_HOXB1	ENST00000563180.1|IRF8|ENSG00000140968.6|interferon regulatory factor 8 	ENST00000564617.1|IRF8|ENSG00000140968.6|interferon regulatory factor 8 	ENST00000564803.1|IRF8|ENSG00000140968.6|interferon regulatory factor 8
hg19_v2_chr5_+_162864575_162864620	0.0721075	HOXA2_HOXB1	ENST00000512163.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000393929.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000340828.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511683.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510097.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511490.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510664.1|CCNG1|ENSG00000113328.14|cyclin G1
hg19_v2_chr8_+_143530791_143530825	0.0712312	HOXA2_HOXB1	ENST00000517894.1|BAI1|ENSG00000181790.6|brain-specific angiogenesis inhibitor 1
hg19_v2_chr2_+_12857043_12857127	0.0639529	HOXA2_HOXB1	ENST00000381465.2|TRIB2|ENSG00000071575.7|tribbles pseudokinase 2
hg19_v2_chr17_-_57229155_57229198	0.0638445	HOXA2_HOXB1	ENST00000584089.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr6_-_159065741_159065795	0.0617948	HOXA2_HOXB1	ENST00000367085.3|DYNLT1|ENSG00000146425.6|dynein, light chain, Tctex-type 1 	ENST00000367089.3|DYNLT1|ENSG00000146425.6|dynein, light chain, Tctex-type 1
hg19_v2_chrX_+_95939638_95939662	0.0617121	HOXA2_HOXB1	ENST00000373061.3|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000373054.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000355827.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2
hg19_v2_chr12_+_10658489_10658489	0.0602575	HOXA2_HOXB1	ENST00000538173.1|EIF2S3L|ENSG00000180574.3|Putative eukaryotic translation initiation factor 2 subunit 3-like protein
hg19_v2_chr1_-_92351666_92351689	0.0550225	HOXA2_HOXB1	ENST00000465892.2|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III 	ENST00000417833.2|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr10_+_24755416_24755470	0.0536351	HOXA2_HOXB1	ENST00000396446.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000396445.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000376451.2|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr2_+_135011731_135011830	0.0524556	HOXA2_HOXB1	ENST00000281923.2|MGAT5|ENSG00000152127.4|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
hg19_v2_chr2_-_200322723_200322819	0.0514291	HOXA2_HOXB1	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr6_-_64029879_64029891	0.0505503	HOXA2_HOXB1	ENST00000370658.5|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain 	ENST00000485906.2|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain 	ENST00000370657.4|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain
hg19_v2_chr7_-_100881041_100881067	0.0500054	HOXA2_HOXB1	ENST00000412417.1|CLDN15|ENSG00000106404.9|claudin 15 	ENST00000414035.1|CLDN15|ENSG00000106404.9|claudin 15
hg19_v2_chr5_+_98109322_98109350	0.049799	HOXA2_HOXB1	ENST00000513185.1|RGMB|ENSG00000174136.7|repulsive guidance molecule family member b
hg19_v2_chr10_+_102505468_102505546	0.0496589	HOXA2_HOXB1	ENST00000361791.3|PAX2|ENSG00000075891.17|paired box 2 	ENST00000355243.3|PAX2|ENSG00000075891.17|paired box 2 	ENST00000428433.1|PAX2|ENSG00000075891.17|paired box 2 	ENST00000370296.2|PAX2|ENSG00000075891.17|paired box 2
hg19_v2_chr10_+_89264625_89264637	0.0493991	HOXA2_HOXB1	ENST00000371996.4|MINPP1|ENSG00000107789.11|multiple inositol-polyphosphate phosphatase 1 	ENST00000371994.4|MINPP1|ENSG00000107789.11|multiple inositol-polyphosphate phosphatase 1
hg19_v2_chr11_+_57365150_57365276	0.048397	HOXA2_HOXB1	ENST00000457869.1|SERPING1|ENSG00000149131.11|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 	ENST00000340687.6|SERPING1|ENSG00000149131.11|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 	ENST00000378323.4|SERPING1|ENSG00000149131.11|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 	ENST00000378324.2|SERPING1|ENSG00000149131.11|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 	ENST00000403558.1|SERPING1|ENSG00000149131.11|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
hg19_v2_chr5_+_145826867_145826903	0.0454469	HOXA2_HOXB1	ENST00000296702.5|TCERG1|ENSG00000113649.7|transcription elongation regulator 1 	ENST00000394421.2|TCERG1|ENSG00000113649.7|transcription elongation regulator 1
hg19_v2_chr7_-_143956815_143956815	0.0424442	HOXA2_HOXB1	ENST00000493325.1|OR2A7|ENSG00000243896.3|olfactory receptor, family 2, subfamily A, member 7
hg19_v2_chr8_+_23386305_23386318	0.0422375	HOXA2_HOXB1	ENST00000519973.1|SLC25A37|ENSG00000147454.9|solute carrier family 25 (mitochondrial iron transporter), member 37
hg19_v2_chr2_-_200323414_200323468	0.0410562	HOXA2_HOXB1	ENST00000443023.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr9_-_15250114_15250143	0.0387565	HOXA2_HOXB1	ENST00000507993.1|TTC39B|ENSG00000155158.16|tetratricopeptide repeat domain 39B
hg19_v2_chr12_+_21168630_21168630	0.0385995	HOXA2_HOXB1	ENST00000421593.2|SLCO1B7|ENSG00000205754.6|solute carrier organic anion transporter family, member 1B7 (non-functional)
hg19_v2_chr1_-_67390474_67390570	0.0377214	HOXA2_HOXB1	ENST00000371023.3|WDR78|ENSG00000152763.12|WD repeat domain 78 	ENST00000371022.3|WDR78|ENSG00000152763.12|WD repeat domain 78 	ENST00000371026.3|WDR78|ENSG00000152763.12|WD repeat domain 78 	ENST00000431318.1|WDR78|ENSG00000152763.12|WD repeat domain 78
hg19_v2_chr16_-_11617444_11617444	0.0373314	HOXA2_HOXB1	ENST00000598234.1|CTD-3088G3.8|ENSG00000188897.4|Protein LOC388210
hg19_v2_chr4_-_90757364_90757396	0.0365169	HOXA2_HOXB1	ENST00000508895.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr1_+_52082751_52082781	0.0359092	HOXA2_HOXB1	ENST00000447887.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000435686.2|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000428468.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000453295.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9
hg19_v2_chr8_-_101730061_101730118	0.0349256	HOXA2_HOXB1	ENST00000519100.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr12_+_7022909_7023065	0.0344877	HOXA2_HOXB1	ENST00000537688.1|ENO2|ENSG00000111674.4|enolase 2 (gamma, neuronal)
hg19_v2_chr2_-_190044480_190044605	0.0335711	HOXA2_HOXB1	ENST00000374866.3|COL5A2|ENSG00000204262.7|collagen, type V, alpha 2
hg19_v2_chr11_-_126174186_126174226	0.0331828	HOXA2_HOXB1	ENST00000524964.1|RP11-712L6.5|ENSG00000255062.1|Uncharacterized protein
hg19_v2_chr3_-_150264272_150264428	0.0324384	HOXA2_HOXB1	ENST00000491660.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000487153.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000239944.2|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1
hg19_v2_chr19_+_13051206_13051244	0.0323469	HOXA2_HOXB1	ENST00000586760.1|CALR|ENSG00000179218.9|calreticulin
hg19_v2_chr19_-_41356347_41356353	0.0316241	HOXA2_HOXB1	ENST00000301141.5|CYP2A6|ENSG00000255974.2|cytochrome P450, family 2, subfamily A, polypeptide 6
hg19_v2_chr19_-_45735138_45735138	0.0310756	HOXA2_HOXB1	ENST00000252482.3|EXOC3L2|ENSG00000130201.3|exocyst complex component 3-like 2
hg19_v2_chr10_-_79397547_79397575	0.0309756	HOXA2_HOXB1	ENST00000481070.1|KCNMA1|ENSG00000156113.16|potassium large conductance calcium-activated channel, subfamily M, alpha member 1
hg19_v2_chr16_+_21608525_21608543	0.0308752	HOXA2_HOXB1	ENST00000567404.1|METTL9|ENSG00000197006.9|methyltransferase like 9
hg19_v2_chr16_+_85645007_85645022	0.0303594	HOXA2_HOXB1	ENST00000405402.2|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein
hg19_v2_chrX_-_30993201_30993201	0.0292394	HOXA2_HOXB1	ENST00000288422.2|TAB3|ENSG00000157625.11|TGF-beta activated kinase 1/MAP3K7 binding protein 3 	ENST00000378932.2|TAB3|ENSG00000157625.11|TGF-beta activated kinase 1/MAP3K7 binding protein 3
hg19_v2_chr8_-_79717750_79717762	0.0280267	HOXA2_HOXB1	ENST00000263851.4|IL7|ENSG00000104432.8|interleukin 7 	ENST00000379113.2|IL7|ENSG00000104432.8|interleukin 7
hg19_v2_chr2_+_176995011_176995085	0.0278121	HOXA2_HOXB1	ENST00000548663.1|HOXD8|ENSG00000175879.7|homeobox D8 	ENST00000450510.2|HOXD8|ENSG00000175879.7|homeobox D8
hg19_v2_chr16_+_66429358_66429432	0.0276084	HOXA2_HOXB1	ENST00000539168.1|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr7_-_27135591_27135658	0.0263056	HOXA2_HOXB1	ENST00000343060.4|HOXA1|ENSG00000105991.7|homeobox A1 	ENST00000355633.5|HOXA1|ENSG00000105991.7|homeobox A1
hg19_v2_chr11_+_133902547_133902580	0.0257204	HOXA2_HOXB1	ENST00000529070.1|RP11-713P17.3|ENSG00000204241.3|RP11-713P17.3
hg19_v2_chr2_+_54684327_54684399	0.0257069	HOXA2_HOXB1	ENST00000389980.3|SPTBN1|ENSG00000115306.11|spectrin, beta, non-erythrocytic 1
hg19_v2_chr1_+_67390578_67390698	0.0238609	HOXA2_HOXB1	ENST00000371018.3|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000355977.6|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000357692.2|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000401041.1|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000371016.1|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000371014.1|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000371012.2|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator
hg19_v2_chr3_+_239652_239708	0.023839	HOXA2_HOXB1	ENST00000435603.1|CHL1|ENSG00000134121.5|cell adhesion molecule L1-like
hg19_v2_chr4_-_90756769_90756846	0.0234615	HOXA2_HOXB1	ENST00000345009.4|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000505199.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000502987.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr19_-_49944806_49944819	0.0231733	HOXA2_HOXB1	ENST00000221485.3|SLC17A7|ENSG00000104888.5|solute carrier family 17 (vesicular glutamate transporter), member 7
hg19_v2_chr1_-_109584608_109584712	0.0226126	HOXA2_HOXB1	ENST00000400794.3|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000528747.1|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000369962.3|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000361054.3|WDR47|ENSG00000085433.11|WD repeat domain 47
hg19_v2_chr5_-_179045199_179045302	0.0216879	HOXA2_HOXB1	ENST00000523921.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v2_chr16_-_49890016_49890046	0.0211087	HOXA2_HOXB1	ENST00000563137.2|ZNF423|ENSG00000102935.7|zinc finger protein 423
hg19_v2_chr9_+_132099158_132099208	0.0209616	HOXA2_HOXB1	ENST00000444125.1|RP11-65J3.1|ENSG00000233901.1|RP11-65J3.1
hg19_v2_chr17_-_42277203_42277281	0.0209244	HOXA2_HOXB1	ENST00000587097.1|ATXN7L3|ENSG00000087152.11|ataxin 7-like 3
hg19_v2_chr20_+_34742650_34742678	0.0207869	HOXA2_HOXB1	ENST00000373945.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1 	ENST00000338074.2|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr10_-_105615164_105615323	0.020727	HOXA2_HOXB1	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr20_+_42574317_42574345	0.0203844	HOXA2_HOXB1	ENST00000358131.5|TOX2|ENSG00000124191.13|TOX high mobility group box family member 2
hg19_v2_chr9_+_40028620_40028620	0.0202289	HOXA2_HOXB1	ENST00000426179.1|AL353791.1|ENSG00000227921.1|AL353791.1
hg19_v2_chr2_+_114647504_114647557	0.0201009	HOXA2_HOXB1	ENST00000263238.2|ACTR3|ENSG00000115091.7|ARP3 actin-related protein 3 homolog (yeast)
hg19_v2_chrX_+_95939711_95939786	0.0193614	HOXA2_HOXB1	ENST00000373049.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000324765.8|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2
hg19_v2_chr7_-_86595190_86595291	0.0192406	HOXA2_HOXB1	ENST00000398276.2|KIAA1324L|ENSG00000164659.10|KIAA1324-like 	ENST00000416314.1|KIAA1324L|ENSG00000164659.10|KIAA1324-like 	ENST00000425689.1|KIAA1324L|ENSG00000164659.10|KIAA1324-like
hg19_v2_chr12_-_86650077_86650095	0.0188701	HOXA2_HOXB1	ENST00000552808.2|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENST00000547225.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr18_+_18943554_18943587	0.0184822	HOXA2_HOXB1	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr17_+_79495397_79495558	0.0182513	HOXA2_HOXB1	ENST00000417245.2|FSCN2|ENSG00000186765.7|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus) 	ENST00000334850.7|FSCN2|ENSG00000186765.7|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)
hg19_v2_chr1_+_68150744_68150890	0.0182289	HOXA2_HOXB1	ENST00000370986.4|GADD45A|ENSG00000116717.7|growth arrest and DNA-damage-inducible, alpha 	ENST00000370985.3|GADD45A|ENSG00000116717.7|growth arrest and DNA-damage-inducible, alpha
hg19_v2_chr1_-_92351769_92351787	0.018037	HOXA2_HOXB1	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr11_-_2162162_2162246	0.0169603	HOXA2_HOXB1	ENST00000381389.1|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A)
hg19_v2_chr3_-_156877997_156878004	0.0167236	HOXA2_HOXB1	ENST00000295926.3|CCNL1|ENSG00000163660.7|cyclin L1
hg19_v2_chr1_+_178062855_178062903	0.0155754	HOXA2_HOXB1	ENST00000448150.3|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chr12_+_101988627_101988762	0.0148732	HOXA2_HOXB1	ENST00000547405.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000452455.2|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000441232.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000360610.2|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000392934.3|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000547509.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000361685.2|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000549145.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000553190.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type
hg19_v2_chr1_-_109584716_109584762	0.0146456	HOXA2_HOXB1	ENST00000531337.1|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000529074.1|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000369965.4|WDR47|ENSG00000085433.11|WD repeat domain 47
hg19_v2_chr6_+_33387868_33387941	0.0139546	HOXA2_HOXB1	ENST00000418600.2|SYNGAP1|ENSG00000197283.8|synaptic Ras GTPase activating protein 1
hg19_v2_chr19_-_12997995_12998021	0.0138034	HOXA2_HOXB1	ENST00000264834.4|KLF1|ENSG00000105610.4|Kruppel-like factor 1 (erythroid)
hg19_v2_chr7_+_86273218_86273242	0.0134078	HOXA2_HOXB1	ENST00000361669.2|GRM3|ENSG00000198822.6|glutamate receptor, metabotropic 3
hg19_v2_chr1_-_109584768_109584850	0.01335	HOXA2_HOXB1	ENST00000357672.3|WDR47|ENSG00000085433.11|WD repeat domain 47
hg19_v2_chr2_+_242089833_242089913	0.0129905	HOXA2_HOXB1	ENST00000404405.3|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7 	ENST00000439916.1|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7 	ENST00000406106.3|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7 	ENST00000401987.1|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7
hg19_v2_chr11_-_126870655_126870673	0.012812	HOXA2_HOXB1	ENST00000525144.2|KIRREL3|ENSG00000149571.6|kin of IRRE like 3 (Drosophila)
hg19_v2_chr13_+_97928395_97928458	0.0125534	HOXA2_HOXB1	ENST00000445661.2|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2
hg19_v2_chr2_-_145278475_145278621	0.0124428	HOXA2_HOXB1	ENST00000558170.2|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
hg19_v2_chr5_+_167181917_167181979	0.0123728	HOXA2_HOXB1	ENST00000519204.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2
hg19_v2_chr1_-_223536679_223536809	0.012297	HOXA2_HOXB1	ENST00000608996.1|SUSD4|ENSG00000143502.10|sushi domain containing 4
hg19_v2_chr17_-_37353950_37353961	0.012274	HOXA2_HOXB1	ENST00000394310.3|CACNB1|ENSG00000067191.11|calcium channel, voltage-dependent, beta 1 subunit 	ENST00000394303.3|CACNB1|ENSG00000067191.11|calcium channel, voltage-dependent, beta 1 subunit 	ENST00000344140.5|CACNB1|ENSG00000067191.11|calcium channel, voltage-dependent, beta 1 subunit
hg19_v2_chr12_+_7282795_7283047	0.0114837	HOXA2_HOXB1	ENST00000266546.6|CLSTN3|ENSG00000139182.9|calsyntenin 3
hg19_v2_chr2_-_197226875_197226946	0.0107047	HOXA2_HOXB1	ENST00000409111.1|HECW2|ENSG00000138411.6|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg19_v2_chr3_-_98619999_98620015	0.0106993	HOXA2_HOXB1	ENST00000449482.1|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr10_-_65028938_65028989	0.0101415	HOXA2_HOXB1	ENST00000402544.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr14_-_54425475_54425500	0.0101068	HOXA2_HOXB1	ENST00000559642.1|BMP4|ENSG00000125378.11|bone morphogenetic protein 4
hg19_v2_chr12_+_101988774_101988849	0.00951917	HOXA2_HOXB1	ENST00000545503.2|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000536007.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000541119.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000361466.2|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000551300.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000550270.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type
hg19_v2_chr15_+_81591757_81591780	0.00944128	HOXA2_HOXB1	ENST00000558332.1|IL16|ENSG00000172349.12|interleukin 16
hg19_v2_chr17_+_1173853_1173853	0.00921635	HOXA2_HOXB1	ENST00000391429.1|BHLHA9|ENSG00000205899.3|basic helix-loop-helix family, member a9
hg19_v2_chr15_-_74501310_74501344	0.00919736	HOXA2_HOXB1	ENST00000423167.2|STRA6|ENSG00000137868.14|stimulated by retinoic acid 6 	ENST00000432245.2|STRA6|ENSG00000137868.14|stimulated by retinoic acid 6
hg19_v2_chr6_+_32006159_32006194	0.00878617	HOXA2_HOXB1	ENST00000478281.1|CYP21A2|ENSG00000231852.2|cytochrome P450, family 21, subfamily A, polypeptide 2 	ENST00000471671.1|CYP21A2|ENSG00000231852.2|cytochrome P450, family 21, subfamily A, polypeptide 2 	ENST00000435122.2|CYP21A2|ENSG00000231852.2|cytochrome P450, family 21, subfamily A, polypeptide 2
hg19_v2_chr12_-_118490217_118490269	0.00859242	HOXA2_HOXB1	ENST00000542304.1|WSB2|ENSG00000176871.4|WD repeat and SOCS box containing 2
hg19_v2_chr16_+_15596123_15596153	0.00850062	HOXA2_HOXB1	ENST00000452191.2|C16orf45|ENSG00000166780.6|chromosome 16 open reading frame 45
hg19_v2_chr17_+_58755184_58755261	0.00815021	HOXA2_HOXB1	ENST00000589222.1|BCAS3|ENSG00000141376.16|breast carcinoma amplified sequence 3 	ENST00000407086.3|BCAS3|ENSG00000141376.16|breast carcinoma amplified sequence 3 	ENST00000390652.5|BCAS3|ENSG00000141376.16|breast carcinoma amplified sequence 3
hg19_v2_chr9_-_73029540_73029540	0.00802822	HOXA2_HOXB1	ENST00000377126.2|KLF9|ENSG00000119138.3|Kruppel-like factor 9
hg19_v2_chr6_-_113754604_113754624	0.00792595	HOXA2_HOXB1	ENST00000421737.1|RP1-124C6.1|ENSG00000232316.1|RP1-124C6.1
hg19_v2_chr7_+_79765071_79765103	0.00765424	HOXA2_HOXB1	ENST00000457358.2|GNAI1|ENSG00000127955.11|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1
hg19_v2_chr12_+_57482877_57482907	0.00717988	HOXA2_HOXB1	ENST00000342556.6|NAB2|ENSG00000166886.8|NGFI-A binding protein 2 (EGR1 binding protein 2) 	ENST00000357680.4|NAB2|ENSG00000166886.8|NGFI-A binding protein 2 (EGR1 binding protein 2)
hg19_v2_chr1_+_243419306_243419422	0.00689016	HOXA2_HOXB1	ENST00000355875.4|SDCCAG8|ENSG00000054282.11|serologically defined colon cancer antigen 8 	ENST00000391846.1|SDCCAG8|ENSG00000054282.11|serologically defined colon cancer antigen 8 	ENST00000366541.3|SDCCAG8|ENSG00000054282.11|serologically defined colon cancer antigen 8 	ENST00000343783.6|SDCCAG8|ENSG00000054282.11|serologically defined colon cancer antigen 8
hg19_v2_chr19_-_51512804_51512837	0.00601238	HOXA2_HOXB1	ENST00000594211.1|KLK9|ENSG00000213022.4|kallikrein-related peptidase 9 	ENST00000376832.4|KLK9|ENSG00000213022.4|kallikrein-related peptidase 9
hg19_v2_chr20_+_30467600_30467641	0.00587725	HOXA2_HOXB1	ENST00000375934.4|TTLL9|ENSG00000131044.12|tubulin tyrosine ligase-like family, member 9 	ENST00000375922.4|TTLL9|ENSG00000131044.12|tubulin tyrosine ligase-like family, member 9
hg19_v2_chr14_-_24733444_24733470	0.00481155	HOXA2_HOXB1	ENST00000560478.1|TGM1|ENSG00000092295.7|transglutaminase 1 	ENST00000560443.1|TGM1|ENSG00000092295.7|transglutaminase 1
hg19_v2_chr3_+_191046810_191046874	0.00436055	HOXA2_HOXB1	ENST00000392455.3|CCDC50|ENSG00000152492.9|coiled-coil domain containing 50 	ENST00000392456.3|CCDC50|ENSG00000152492.9|coiled-coil domain containing 50
hg19_v2_chr2_-_44588694_44588707	0.00383632	HOXA2_HOXB1	ENST00000409957.1|PREPL|ENSG00000138078.11|prolyl endopeptidase-like
hg19_v2_chr12_+_57610562_57610608	0.00363069	HOXA2_HOXB1	ENST00000349394.5|NXPH4|ENSG00000182379.9|neurexophilin 4
hg19_v2_chr9_-_101471479_101471522	0.0035302	HOXA2_HOXB1	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr15_-_64673630_64673648	0.00337824	HOXA2_HOXB1	ENST00000558008.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000559519.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000380258.2|KIAA0101|ENSG00000166803.6|KIAA0101
hg19_v2_chr2_-_44588679_44588693	0.00323431	HOXA2_HOXB1	ENST00000409411.1|PREPL|ENSG00000138078.11|prolyl endopeptidase-like
hg19_v2_chr13_+_52586517_52586559	0.00310026	HOXA2_HOXB1	ENST00000523764.1|ALG11|ENSG00000253710.1|ALG11, alpha-1,2-mannosyltransferase 	ENST00000521508.1|ALG11|ENSG00000253710.1|ALG11, alpha-1,2-mannosyltransferase
hg19_v2_chr8_+_22250334_22250354	0.0029017	HOXA2_HOXB1	ENST00000520832.1|SLC39A14|ENSG00000104635.9|solute carrier family 39 (zinc transporter), member 14
hg19_v2_chr2_+_26624775_26624809	0.00272406	HOXA2_HOXB1	ENST00000288710.2|DRC1|ENSG00000157856.6|dynein regulatory complex subunit 1 homolog (Chlamydomonas)
hg19_v2_chr11_-_93583697_93583807	0.00208276	HOXA2_HOXB1	ENST00000409977.1|VSTM5|ENSG00000214376.5|V-set and transmembrane domain containing 5
hg19_v2_chr1_-_65533390_65533443	0.0019476	HOXA2_HOXB1	ENST00000448344.1|RP4-535B20.1|ENSG00000231485.1|RP4-535B20.1
hg19_v2_chr10_+_95848824_95848852	0.00131877	HOXA2_HOXB1	ENST00000371385.3|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1 	ENST00000371375.1|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1
hg19_v2_chrX_-_110655306_110655330	0.00100607	HOXA2_HOXB1	ENST00000371993.2|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr15_+_48009541_48009676	0.000385423	HOXA2_HOXB1	ENST00000536845.2|SEMA6D|ENSG00000137872.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 	ENST00000558816.1|SEMA6D|ENSG00000137872.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
hg19_v2_chr15_-_74501360_74501380	0.000383496	HOXA2_HOXB1	ENST00000323940.5|STRA6|ENSG00000137868.14|stimulated by retinoic acid 6
hg19_v2_chr2_-_145277882_145277967	4.13937e-05	HOXA2_HOXB1	ENST00000465070.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000444559.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
