hg19_v2_chr19_-_10697895_10697993	1.55841	HOXA1	ENST00000591240.1|AP1M2|ENSG00000129354.7|adaptor-related protein complex 1, mu 2 subunit 	ENST00000589684.1|AP1M2|ENSG00000129354.7|adaptor-related protein complex 1, mu 2 subunit 	ENST00000591676.1|AP1M2|ENSG00000129354.7|adaptor-related protein complex 1, mu 2 subunit 	ENST00000250244.6|AP1M2|ENSG00000129354.7|adaptor-related protein complex 1, mu 2 subunit 	ENST00000590923.1|AP1M2|ENSG00000129354.7|adaptor-related protein complex 1, mu 2 subunit
hg19_v2_chr8_-_22549856_22549927	0.517809	HOXA1	ENST00000522910.1|EGR3|ENSG00000179388.8|early growth response 3
hg19_v2_chr5_+_162864575_162864620	0.463824	HOXA1	ENST00000512163.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000393929.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000340828.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511683.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510097.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511490.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510664.1|CCNG1|ENSG00000113328.14|cyclin G1
hg19_v2_chr20_-_45976816_45976860	0.428288	HOXA1	ENST00000441977.1|ZMYND8|ENSG00000101040.15|zinc finger, MYND-type containing 8
hg19_v2_chr19_+_16435625_16435682	0.376753	HOXA1	ENST00000248071.5|KLF2|ENSG00000127528.5|Kruppel-like factor 2 	ENST00000592003.1|KLF2|ENSG00000127528.5|Kruppel-like factor 2
hg19_v2_chr12_+_69742121_69742171	0.372844	HOXA1	ENST00000261267.2|LYZ|ENSG00000090382.2|lysozyme 	ENST00000549690.1|LYZ|ENSG00000090382.2|lysozyme 	ENST00000548839.1|LYZ|ENSG00000090382.2|lysozyme
hg19_v2_chrX_-_63005405_63005440	0.365228	HOXA1	ENST00000374878.1|ARHGEF9|ENSG00000131089.9|Cdc42 guanine nucleotide exchange factor (GEF) 9 	ENST00000437457.2|ARHGEF9|ENSG00000131089.9|Cdc42 guanine nucleotide exchange factor (GEF) 9
hg19_v2_chr15_-_64673630_64673648	0.338958	HOXA1	ENST00000558008.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000559519.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000380258.2|KIAA0101|ENSG00000166803.6|KIAA0101
hg19_v2_chr15_-_93616340_93616395	0.327342	HOXA1	ENST00000557420.1|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a 	ENST00000542321.2|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a
hg19_v2_chr15_-_64673665_64673709	0.276871	HOXA1	ENST00000300035.4|KIAA0101|ENSG00000166803.6|KIAA0101
hg19_v2_chr17_+_26800296_26800314	0.261941	HOXA1	ENST00000444914.3|SLC13A2|ENSG00000007216.10|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 	ENST00000314669.5|SLC13A2|ENSG00000007216.10|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
hg19_v2_chr7_-_120497178_120497407	0.258375	HOXA1	ENST00000441017.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000424710.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000433758.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chr9_-_116861337_116861349	0.250104	HOXA1	ENST00000374118.3|KIF12|ENSG00000136883.8|kinesin family member 12
hg19_v2_chr6_+_80129989_80130014	0.245822	HOXA1	ENST00000429444.1|RP1-232L24.3|ENSG00000231533.1|RP1-232L24.3
hg19_v2_chr17_-_79359046_79359058	0.244682	HOXA1	ENST00000574041.1|RP11-1055B8.3|ENSG00000262223.2|RP11-1055B8.3
hg19_v2_chr5_-_125930929_125931110	0.233847	HOXA1	ENST00000553117.1|ALDH7A1|ENSG00000164904.11|aldehyde dehydrogenase 7 family, member A1 	ENST00000447989.2|ALDH7A1|ENSG00000164904.11|aldehyde dehydrogenase 7 family, member A1 	ENST00000409134.3|ALDH7A1|ENSG00000164904.11|aldehyde dehydrogenase 7 family, member A1
hg19_v2_chr11_-_111649015_111649030	0.226625	HOXA1	ENST00000529841.1|RP11-108O10.2|ENSG00000254990.1|RP11-108O10.2
hg19_v2_chr1_-_151319710_151319833	0.225986	HOXA1	ENST00000290524.4|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000437327.1|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000452513.2|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000368870.2|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000452671.2|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression)
hg19_v2_chr17_+_40932610_40932696	0.222692	HOXA1	ENST00000246914.5|WNK4|ENSG00000126562.12|WNK lysine deficient protein kinase 4
hg19_v2_chr8_-_42360015_42360146	0.212489	HOXA1	ENST00000522707.1|SLC20A2|ENSG00000168575.5|solute carrier family 20 (phosphate transporter), member 2
hg19_v2_chr9_-_112970436_112970469	0.209926	HOXA1	ENST00000400613.4|C9orf152|ENSG00000188959.9|chromosome 9 open reading frame 152
hg19_v2_chr12_-_71533055_71533101	0.208591	HOXA1	ENST00000552128.1|TSPAN8|ENSG00000127324.4|tetraspanin 8
hg19_v2_chrX_+_154610428_154610428	0.203611	HOXA1	ENST00000354514.4|H2AFB2|ENSG00000198307.4|H2A histone family, member B2
hg19_v2_chr16_-_20566616_20566616	0.202899	HOXA1	ENST00000569163.1|ACSM2B|ENSG00000066813.10|acyl-CoA synthetase medium-chain family member 2B
hg19_v2_chr2_-_75788428_75788476	0.193217	HOXA1	ENST00000432649.1|EVA1A|ENSG00000115363.9|eva-1 homolog A (C. elegans)
hg19_v2_chr8_-_27468842_27468878	0.192287	HOXA1	ENST00000523500.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr11_-_93583697_93583807	0.185925	HOXA1	ENST00000409977.1|VSTM5|ENSG00000214376.5|V-set and transmembrane domain containing 5
hg19_v2_chr11_+_2482661_2482675	0.185351	HOXA1	ENST00000335475.5|KCNQ1|ENSG00000053918.11|potassium voltage-gated channel, KQT-like subfamily, member 1
hg19_v2_chr8_-_27468945_27468948	0.183862	HOXA1	ENST00000405140.3|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr19_-_39368887_39368935	0.177603	HOXA1	ENST00000340740.3|RINL|ENSG00000187994.9|Ras and Rab interactor-like 	ENST00000591812.1|RINL|ENSG00000187994.9|Ras and Rab interactor-like
hg19_v2_chr19_-_16008880_16008930	0.175666	HOXA1	ENST00000011989.7|CYP4F2|ENSG00000186115.8|cytochrome P450, family 4, subfamily F, polypeptide 2 	ENST00000221700.6|CYP4F2|ENSG00000186115.8|cytochrome P450, family 4, subfamily F, polypeptide 2
hg19_v2_chr5_-_125930877_125930919	0.173496	HOXA1	ENST00000510111.2|ALDH7A1|ENSG00000164904.11|aldehyde dehydrogenase 7 family, member A1 	ENST00000509270.1|ALDH7A1|ENSG00000164904.11|aldehyde dehydrogenase 7 family, member A1
hg19_v2_chr3_+_196366616_196366690	0.172966	HOXA1	ENST00000426755.1|PIGX|ENSG00000163964.9|phosphatidylinositol glycan anchor biosynthesis, class X
hg19_v2_chr16_-_11477562_11477562	0.172412	HOXA1	ENST00000595168.1|CTD-3088G3.8|ENSG00000188897.4|Protein LOC388210
hg19_v2_chr10_+_62538248_62538260	0.169882	HOXA1	ENST00000448257.2|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1
hg19_v2_chr11_-_104034827_104034850	0.168921	HOXA1	ENST00000393158.2|PDGFD|ENSG00000170962.8|platelet derived growth factor D
hg19_v2_chr1_-_20306909_20306936	0.167515	HOXA1	ENST00000375111.3|PLA2G2A|ENSG00000188257.6|phospholipase A2, group IIA (platelets, synovial fluid) 	ENST00000400520.3|PLA2G2A|ENSG00000188257.6|phospholipase A2, group IIA (platelets, synovial fluid)
hg19_v2_chr22_+_41968007_41968021	0.166837	HOXA1	ENST00000460790.1|CSDC2|ENSG00000172346.10|cold shock domain containing C2, RNA binding
hg19_v2_chr8_+_104152922_104152992	0.161587	HOXA1	ENST00000309982.5|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic 	ENST00000438105.2|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic 	ENST00000297574.6|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic
hg19_v2_chr12_-_89919965_89919978	0.159732	HOXA1	ENST00000548729.1|POC1B-GALNT4|ENSG00000259075.2|POC1B-GALNT4 readthrough
hg19_v2_chr10_-_102046098_102046122	0.156913	HOXA1	ENST00000441611.1|BLOC1S2|ENSG00000196072.7|biogenesis of lysosomal organelles complex-1, subunit 2
hg19_v2_chr8_-_27469196_27469294	0.153815	HOXA1	ENST00000546343.1|CLU|ENSG00000120885.15|clusterin 	ENST00000560566.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr17_-_57229155_57229198	0.149262	HOXA1	ENST00000584089.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr16_-_28303360_28303393	0.148905	HOXA1	ENST00000501520.1|RP11-57A19.2|ENSG00000246465.1|RP11-57A19.2
hg19_v2_chr11_-_104035088_104035119	0.14788	HOXA1	ENST00000302251.5|PDGFD|ENSG00000170962.8|platelet derived growth factor D
hg19_v2_chr2_+_65215604_65215625	0.144483	HOXA1	ENST00000531327.1|SLC1A4|ENSG00000115902.6|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
hg19_v2_chr1_+_85527987_85528016	0.144459	HOXA1	ENST00000326813.8|WDR63|ENSG00000162643.8|WD repeat domain 63 	ENST00000294664.6|WDR63|ENSG00000162643.8|WD repeat domain 63 	ENST00000528899.1|WDR63|ENSG00000162643.8|WD repeat domain 63
hg19_v2_chr7_+_74379083_74379083	0.140426	HOXA1	ENST00000361825.7|GATSL1|ENSG00000183086.10|GATS protein-like 1
hg19_v2_chr5_-_42825983_42826007	0.135152	HOXA1	ENST00000506577.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1
hg19_v2_chr1_-_45140074_45140169	0.134688	HOXA1	ENST00000420706.1|TMEM53|ENSG00000126106.9|transmembrane protein 53 	ENST00000372235.3|TMEM53|ENSG00000126106.9|transmembrane protein 53 	ENST00000372242.3|TMEM53|ENSG00000126106.9|transmembrane protein 53 	ENST00000372243.3|TMEM53|ENSG00000126106.9|transmembrane protein 53 	ENST00000372244.3|TMEM53|ENSG00000126106.9|transmembrane protein 53
hg19_v2_chr19_+_19144384_19144473	0.133088	HOXA1	ENST00000392335.2|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000535612.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000537263.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000540707.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000541725.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000269932.6|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000546344.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000540792.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000536098.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000541898.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000543877.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6
hg19_v2_chr4_-_38806404_38806537	0.132704	HOXA1	ENST00000308979.2|TLR1|ENSG00000174125.3|toll-like receptor 1 	ENST00000505940.1|TLR1|ENSG00000174125.3|toll-like receptor 1 	ENST00000515861.1|TLR1|ENSG00000174125.3|toll-like receptor 1
hg19_v2_chr7_+_139528952_139529038	0.132285	HOXA1	ENST00000416849.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000436047.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000414508.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000448866.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr1_-_207095324_207095357	0.130698	HOXA1	ENST00000530505.1|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000367091.3|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000442471.2|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3
hg19_v2_chr7_+_139529040_139529073	0.128254	HOXA1	ENST00000455353.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000458722.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000411653.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr17_+_43239231_43239297	0.1272	HOXA1	ENST00000591576.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2 	ENST00000591070.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2 	ENST00000592695.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2
hg19_v2_chr17_+_43239191_43239212	0.127004	HOXA1	ENST00000589230.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2
hg19_v2_chr10_+_62538089_62538244	0.126677	HOXA1	ENST00000519078.2|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1 	ENST00000395284.3|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1 	ENST00000316629.4|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1
hg19_v2_chr19_-_33360647_33360691	0.126353	HOXA1	ENST00000590341.1|SLC7A9|ENSG00000021488.8|solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 	ENST00000587772.1|SLC7A9|ENSG00000021488.8|solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 	ENST00000023064.4|SLC7A9|ENSG00000021488.8|solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9
hg19_v2_chr14_-_81408063_81408088	0.124745	HOXA1	ENST00000557411.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa
hg19_v2_chr13_-_52026730_52026775	0.124303	HOXA1	ENST00000420668.2|INTS6|ENSG00000102786.10|integrator complex subunit 6
hg19_v2_chr11_+_63870660_63870660	0.123153	HOXA1	ENST00000246841.3|FLRT1|ENSG00000126500.3|fibronectin leucine rich transmembrane protein 1
hg19_v2_chr14_+_21569245_21569294	0.118814	HOXA1	ENST00000556585.2|TMEM253|ENSG00000232070.4|transmembrane protein 253
hg19_v2_chr17_+_68071389_68071426	0.118367	HOXA1	ENST00000283936.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392671.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr3_-_71774516_71774587	0.11836	HOXA1	ENST00000425534.3|EIF4E3|ENSG00000163412.8|eukaryotic translation initiation factor 4E family member 3
hg19_v2_chrX_+_70443050_70443061	0.11605	HOXA1	ENST00000361726.6|GJB1|ENSG00000169562.9|gap junction protein, beta 1, 32kDa
hg19_v2_chr1_+_226250379_226250427	0.115694	HOXA1	ENST00000366815.3|H3F3A|ENSG00000163041.5|H3 histone, family 3A 	ENST00000366814.3|H3F3A|ENSG00000163041.5|H3 histone, family 3A
hg19_v2_chr2_-_75788424_75788427	0.114385	HOXA1	ENST00000410071.1|EVA1A|ENSG00000115363.9|eva-1 homolog A (C. elegans)
hg19_v2_chr17_-_3499125_3499125	0.111482	HOXA1	ENST00000399759.3|TRPV1|ENSG00000196689.6|transient receptor potential cation channel, subfamily V, member 1
hg19_v2_chr18_-_74207146_74207183	0.110844	HOXA1	ENST00000443185.2|ZNF516|ENSG00000101493.6|zinc finger protein 516
hg19_v2_chr5_+_36152163_36152174	0.110031	HOXA1	ENST00000274255.6|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
hg19_v2_chrX_+_37639302_37639326	0.108736	HOXA1	ENST00000545017.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide 	ENST00000536160.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide
hg19_v2_chr5_-_173173171_173173214	0.107745	HOXA1	ENST00000517733.1|CTB-43E15.3|ENSG00000253686.1|CTB-43E15.3	ENST00000518902.1|CTB-43E15.3|ENSG00000253686.1|CTB-43E15.3
hg19_v2_chr5_+_133861790_133861829	0.105931	HOXA1	ENST00000395003.1|PHF15|ENSG00000043143.16|jade family PHD finger 2
hg19_v2_chr8_-_27468717_27468788	0.105745	HOXA1	ENST00000520796.1|CLU|ENSG00000120885.15|clusterin 	ENST00000520491.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr1_-_53018654_53018777	0.105727	HOXA1	ENST00000257177.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000355809.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000528642.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000470626.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000371544.3|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11
hg19_v2_chr2_-_44588694_44588707	0.105399	HOXA1	ENST00000409957.1|PREPL|ENSG00000138078.11|prolyl endopeptidase-like
hg19_v2_chr9_-_128246769_128246780	0.104947	HOXA1	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr5_+_159656437_159656517	0.102537	HOXA1	ENST00000402432.3|FABP6|ENSG00000170231.11|fatty acid binding protein 6, ileal
hg19_v2_chr19_-_42192096_42192171	0.10231	HOXA1	ENST00000602225.1|CEACAM7|ENSG00000007306.10|carcinoembryonic antigen-related cell adhesion molecule 7
hg19_v2_chr17_-_79359021_79359029	0.102017	HOXA1	ENST00000572301.1|RP11-1055B8.3|ENSG00000262223.2|RP11-1055B8.3
hg19_v2_chr4_-_144826682_144826716	0.101859	HOXA1	ENST00000358615.4|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group) 	ENST00000437468.2|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group)
hg19_v2_chr12_+_75728419_75728476	0.101821	HOXA1	ENST00000378695.4|GLIPR1L1|ENSG00000173401.5|GLI pathogenesis-related 1 like 1 	ENST00000312442.2|GLIPR1L1|ENSG00000173401.5|GLI pathogenesis-related 1 like 1
hg19_v2_chr1_-_201096312_201096312	0.100783	HOXA1	ENST00000449188.2|ASCL5|ENSG00000232237.2|achaete-scute family bHLH transcription factor 5
hg19_v2_chr2_-_225434538_225434545	0.0989111	HOXA1	ENST00000409096.1|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr6_-_31689456_31689622	0.0987037	HOXA1	ENST00000495859.1|LY6G6C|ENSG00000204421.2|lymphocyte antigen 6 complex, locus G6C 	ENST00000375819.2|LY6G6C|ENSG00000204421.2|lymphocyte antigen 6 complex, locus G6C
hg19_v2_chr14_+_24779340_24779371	0.098435	HOXA1	ENST00000533293.1|LTB4R2|ENSG00000213906.5|leukotriene B4 receptor 2 	ENST00000543919.1|LTB4R2|ENSG00000213906.5|leukotriene B4 receptor 2
hg19_v2_chr2_+_161993465_161993481	0.0974046	HOXA1	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr7_+_94139105_94139197	0.0973865	HOXA1	ENST00000297273.4|CASD1|ENSG00000127995.12|CAS1 domain containing 1
hg19_v2_chr2_-_44588679_44588693	0.0964654	HOXA1	ENST00000409411.1|PREPL|ENSG00000138078.11|prolyl endopeptidase-like
hg19_v2_chr20_+_34742650_34742678	0.0959096	HOXA1	ENST00000373945.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1 	ENST00000338074.2|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr3_-_149093499_149093499	0.0958074	HOXA1	ENST00000472441.1|TM4SF1|ENSG00000169908.6|transmembrane 4 L six family member 1
hg19_v2_chr11_+_34460447_34460561	0.0956441	HOXA1	ENST00000241052.4|CAT|ENSG00000121691.4|catalase
hg19_v2_chr5_-_693500_693511	0.0951034	HOXA1	ENST00000360578.5|TPPP|ENSG00000171368.10|tubulin polymerization promoting protein
hg19_v2_chr12_-_95510743_95510753	0.0942856	HOXA1	ENST00000551521.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6
hg19_v2_chr15_-_93616892_93616939	0.0941276	HOXA1	ENST00000556658.1|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a 	ENST00000538818.1|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a 	ENST00000425933.2|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a
hg19_v2_chr1_-_182369751_182369777	0.0940822	HOXA1	ENST00000367565.1|TEDDM1|ENSG00000203730.2|transmembrane epididymal protein 1
hg19_v2_chr8_+_22132847_22132876	0.0930119	HOXA1	ENST00000521356.1|PIWIL2|ENSG00000197181.7|piwi-like RNA-mediated gene silencing 2
hg19_v2_chr1_+_165864800_165864818	0.0908471	HOXA1	ENST00000469256.2|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr15_+_84908573_84908671	0.0903372	HOXA1	ENST00000424966.1|GOLGA6L4|ENSG00000184206.7|golgin A6 family-like 4 	ENST00000422563.2|GOLGA6L4|ENSG00000184206.7|golgin A6 family-like 4
hg19_v2_chr9_+_33795533_33795562	0.0896393	HOXA1	ENST00000379405.3|PRSS3|ENSG00000010438.12|protease, serine, 3
hg19_v2_chr21_-_46340884_46341048	0.0892156	HOXA1	ENST00000302347.5|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) 	ENST00000517819.1|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
hg19_v2_chr12_-_110906027_110906089	0.0891553	HOXA1	ENST00000537466.2|GPN3|ENSG00000111231.4|GPN-loop GTPase 3 	ENST00000550974.1|GPN3|ENSG00000111231.4|GPN-loop GTPase 3 	ENST00000228827.3|GPN3|ENSG00000111231.4|GPN-loop GTPase 3
hg19_v2_chr10_-_105615164_105615323	0.0881874	HOXA1	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chrX_-_154493791_154493874	0.0877422	HOXA1	ENST00000369454.3|RAB39B|ENSG00000155961.4|RAB39B, member RAS oncogene family
hg19_v2_chr7_+_45067265_45067276	0.0876489	HOXA1	ENST00000474617.1|CCM2|ENSG00000136280.11|cerebral cavernous malformation 2
hg19_v2_chr18_+_11752040_11752117	0.0869151	HOXA1	ENST00000423027.3|GNAL|ENSG00000141404.11|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v2_chr22_-_39190116_39190203	0.0863152	HOXA1	ENST00000406622.1|SUN2|ENSG00000100242.11|Sad1 and UNC84 domain containing 2 	ENST00000216068.4|DNAL4|ENSG00000100246.8|dynein, axonemal, light chain 4 	ENST00000406199.3|DNAL4|ENSG00000100246.8|dynein, axonemal, light chain 4
hg19_v2_chr8_-_79717163_79717305	0.0858066	HOXA1	ENST00000520269.1|IL7|ENSG00000104432.8|interleukin 7
hg19_v2_chr17_-_44896047_44896126	0.0849151	HOXA1	ENST00000225512.5|WNT3|ENSG00000108379.5|wingless-type MMTV integration site family, member 3
hg19_v2_chr16_+_28303804_28303864	0.0848358	HOXA1	ENST00000341901.4|SBK1|ENSG00000188322.4|SH3 domain binding kinase 1
hg19_v2_chr20_-_30458491_30458550	0.0839388	HOXA1	ENST00000339738.5|DUSP15|ENSG00000149599.11|dual specificity phosphatase 15
hg19_v2_chr5_+_133861339_133861432	0.0830169	HOXA1	ENST00000282605.4|PHF15|ENSG00000043143.16|jade family PHD finger 2 	ENST00000361895.2|PHF15|ENSG00000043143.16|jade family PHD finger 2 	ENST00000402835.1|PHF15|ENSG00000043143.16|jade family PHD finger 2
hg19_v2_chr1_-_153517473_153517539	0.0826131	HOXA1	ENST00000368715.1|S100A4|ENSG00000196154.7|S100 calcium binding protein A4
hg19_v2_chr3_-_129375556_129375570	0.0824137	HOXA1	ENST00000510323.1|TMCC1|ENSG00000172765.12|transmembrane and coiled-coil domain family 1
hg19_v2_chr1_+_162602244_162602289	0.0821248	HOXA1	ENST00000367922.3|DDR2|ENSG00000162733.12|discoidin domain receptor tyrosine kinase 2 	ENST00000367921.3|DDR2|ENSG00000162733.12|discoidin domain receptor tyrosine kinase 2
hg19_v2_chr2_+_87808725_87808733	0.0796661	HOXA1	ENST00000413202.1|LINC00152|ENSG00000222041.6|long intergenic non-protein coding RNA 152
hg19_v2_chr9_-_5304432_5304719	0.0782263	HOXA1	ENST00000416837.1|RLN2|ENSG00000107014.7|relaxin 2 	ENST00000308420.3|RLN2|ENSG00000107014.7|relaxin 2
hg19_v2_chr7_-_27170352_27170418	0.078123	HOXA1	ENST00000428284.2|HOXA4|ENSG00000197576.9|homeobox A4 	ENST00000360046.5|HOXA4|ENSG00000197576.9|homeobox A4
hg19_v2_chr13_-_20077417_20077419	0.0758451	HOXA1	ENST00000382978.1|TPTE2|ENSG00000132958.13|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 	ENST00000400230.2|TPTE2|ENSG00000132958.13|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 	ENST00000255310.6|TPTE2|ENSG00000132958.13|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2
hg19_v2_chr12_+_65996599_65996667	0.0733322	HOXA1	ENST00000539116.1|RP11-221N13.3|ENSG00000256268.1|RP11-221N13.3	ENST00000541391.1|RP11-221N13.3|ENSG00000256268.1|RP11-221N13.3
hg19_v2_chr22_-_22641542_22641586	0.0733072	HOXA1	ENST00000606654.1|LL22NC03-2H8.5|ENSG00000272216.1|LL22NC03-2H8.5
hg19_v2_chr16_-_66584015_66584035	0.0730597	HOXA1	ENST00000545043.2|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial
hg19_v2_chr16_+_75256507_75256511	0.0728295	HOXA1	ENST00000495583.1|CTRB1|ENSG00000168925.6|chymotrypsinogen B1
hg19_v2_chr3_-_179322416_179322435	0.0717792	HOXA1	ENST00000259038.2|MRPL47|ENSG00000136522.9|mitochondrial ribosomal protein L47
hg19_v2_chr12_+_64173583_64173664	0.0703511	HOXA1	ENST00000261234.6|TMEM5|ENSG00000118600.7|transmembrane protein 5
hg19_v2_chr1_-_33338076_33338105	0.069893	HOXA1	ENST00000496770.1|FNDC5|ENSG00000160097.11|fibronectin type III domain containing 5
hg19_v2_chr8_-_27462822_27462856	0.0698737	HOXA1	ENST00000522098.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr5_-_141338627_141338627	0.0686938	HOXA1	ENST00000231484.3|PCDH12|ENSG00000113555.4|protocadherin 12
hg19_v2_chr1_-_211666259_211666259	0.0682406	HOXA1	ENST00000367002.4|RD3|ENSG00000198570.5|retinal degeneration 3
hg19_v2_chr17_+_39975455_39975507	0.0680707	HOXA1	ENST00000455106.1|FKBP10|ENSG00000141756.14|FK506 binding protein 10, 65 kDa
hg19_v2_chr4_+_71600063_71600134	0.067769	HOXA1	ENST00000513597.1|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr4_+_2451700_2451700	0.0677533	HOXA1	ENST00000506607.1|RP11-503N18.3|ENSG00000249428.1|Uncharacterized protein
hg19_v2_chr17_+_39975544_39975609	0.0676986	HOXA1	ENST00000544340.1|FKBP10|ENSG00000141756.14|FK506 binding protein 10, 65 kDa
hg19_v2_chr11_+_46193466_46193498	0.0666131	HOXA1	ENST00000533793.1|RP11-702F3.3|ENSG00000255314.1|RP11-702F3.3
hg19_v2_chr15_-_75134992_75135029	0.0650369	HOXA1	ENST00000568667.1|ULK3|ENSG00000140474.8|unc-51 like kinase 3
hg19_v2_chr19_-_15544099_15544156	0.0645749	HOXA1	ENST00000599910.2|WIZ|ENSG00000011451.13|widely interspaced zinc finger motifs
hg19_v2_chr13_-_20735178_20735231	0.0641198	HOXA1	ENST00000241125.3|GJA3|ENSG00000121743.3|gap junction protein, alpha 3, 46kDa
hg19_v2_chr10_+_98741041_98741041	0.0640843	HOXA1	ENST00000286067.2|C10orf12|ENSG00000155640.5|chromosome 10 open reading frame 12
hg19_v2_chr20_-_62168714_62168735	0.0633266	HOXA1	ENST00000542869.1|PTK6|ENSG00000101213.5|protein tyrosine kinase 6
hg19_v2_chr20_+_60174827_60174849	0.0628432	HOXA1	ENST00000543233.1|CDH4|ENSG00000179242.11|cadherin 4, type 1, R-cadherin (retinal)
hg19_v2_chr10_+_99349450_99349458	0.0624379	HOXA1	ENST00000370640.3|C10orf62|ENSG00000203942.3|chromosome 10 open reading frame 62
hg19_v2_chr7_+_20370746_20370778	0.0621681	HOXA1	ENST00000222573.4|ITGB8|ENSG00000105855.5|integrin, beta 8
hg19_v2_chrX_-_154060946_154060946	0.0616776	HOXA1	ENST00000369529.1|SMIM9|ENSG00000203870.5|small integral membrane protein 9
hg19_v2_chr3_-_179322436_179322447	0.0591708	HOXA1	ENST00000392659.2|MRPL47|ENSG00000136522.9|mitochondrial ribosomal protein L47 	ENST00000476781.1|MRPL47|ENSG00000136522.9|mitochondrial ribosomal protein L47
hg19_v2_chr19_+_38880695_38880840	0.0585259	HOXA1	ENST00000587947.1|SPRED3|ENSG00000188766.8|sprouty-related, EVH1 domain containing 3 	ENST00000338502.4|SPRED3|ENSG00000188766.8|sprouty-related, EVH1 domain containing 3
hg19_v2_chr1_-_39347255_39347303	0.0584252	HOXA1	ENST00000454994.2|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa 	ENST00000357771.3|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa
hg19_v2_chr12_+_48577366_48577374	0.0581452	HOXA1	ENST00000316554.3|C12orf68|ENSG00000177875.3|chromosome 12 open reading frame 68
hg19_v2_chr12_+_125478241_125478260	0.0575286	HOXA1	ENST00000341446.8|BRI3BP|ENSG00000184992.10|BRI3 binding protein
hg19_v2_chr7_+_30174668_30174753	0.0568462	HOXA1	ENST00000415604.1|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr12_+_8276433_8276493	0.0555517	HOXA1	ENST00000345999.3|CLEC4A|ENSG00000111729.8|C-type lectin domain family 4, member A 	ENST00000352620.3|CLEC4A|ENSG00000111729.8|C-type lectin domain family 4, member A 	ENST00000360500.3|CLEC4A|ENSG00000111729.8|C-type lectin domain family 4, member A
hg19_v2_chr2_-_170681375_170681441	0.0554877	HOXA1	ENST00000410097.1|METTL5|ENSG00000138382.9|methyltransferase like 5 	ENST00000308099.3|METTL5|ENSG00000138382.9|methyltransferase like 5 	ENST00000409837.1|METTL5|ENSG00000138382.9|methyltransferase like 5 	ENST00000538491.1|METTL5|ENSG00000138382.9|methyltransferase like 5 	ENST00000260953.5|METTL5|ENSG00000138382.9|methyltransferase like 5 	ENST00000409965.1|METTL5|ENSG00000138382.9|methyltransferase like 5 	ENST00000392640.2|METTL5|ENSG00000138382.9|methyltransferase like 5
hg19_v2_chr8_-_22550691_22550717	0.0545709	HOXA1	ENST00000519492.1|EGR3|ENSG00000179388.8|early growth response 3
hg19_v2_chr16_-_21863541_21863541	0.0543337	HOXA1	ENST00000543654.1|NPIPB4|ENSG00000185864.12|nuclear pore complex interacting protein family, member B4
hg19_v2_chr12_+_21525818_21525862	0.0542856	HOXA1	ENST00000240652.3|IAPP|ENSG00000121351.3|islet amyloid polypeptide 	ENST00000542023.1|IAPP|ENSG00000121351.3|islet amyloid polypeptide 	ENST00000537593.1|IAPP|ENSG00000121351.3|islet amyloid polypeptide
hg19_v2_chr1_-_13673511_13673511	0.0525	HOXA1	ENST00000344998.3|PRAMEF14|ENSG00000204481.6|PRAME family member 14 	ENST00000334600.6|PRAMEF14|ENSG00000204481.6|PRAME family member 14
hg19_v2_chr9_+_124329336_124329406	0.0524608	HOXA1	ENST00000394340.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000436835.1|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000259371.2|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chr13_-_24895566_24895566	0.051599	HOXA1	ENST00000422229.2|AL359736.1|ENSG00000205850.6|protein PCOTH isoform 1
hg19_v2_chr2_-_170681324_170681372	0.0515515	HOXA1	ENST00000409340.1|METTL5|ENSG00000138382.9|methyltransferase like 5
hg19_v2_chr12_-_10978957_10978957	0.051282	HOXA1	ENST00000240619.2|TAS2R10|ENSG00000121318.2|taste receptor, type 2, member 10
hg19_v2_chr10_-_98945677_98945729	0.0509105	HOXA1	ENST00000266058.4|SLIT1|ENSG00000187122.12|slit homolog 1 (Drosophila) 	ENST00000371041.3|SLIT1|ENSG00000187122.12|slit homolog 1 (Drosophila)
hg19_v2_chr1_-_45140227_45140243	0.0508488	HOXA1	ENST00000372237.3|TMEM53|ENSG00000126106.9|transmembrane protein 53
hg19_v2_chr14_+_57046500_57046529	0.0505819	HOXA1	ENST00000261556.6|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr2_+_264869_264906	0.0497693	HOXA1	ENST00000272067.6|ACP1|ENSG00000143727.11|acid phosphatase 1, soluble 	ENST00000272065.5|ACP1|ENSG00000143727.11|acid phosphatase 1, soluble 	ENST00000407983.3|ACP1|ENSG00000143727.11|acid phosphatase 1, soluble
hg19_v2_chr2_-_112237835_112237844	0.0497175	HOXA1	ENST00000442293.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding) 	ENST00000439494.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding)
hg19_v2_chr3_+_48264816_48264862	0.0497153	HOXA1	ENST00000296435.2|CAMP|ENSG00000164047.3|cathelicidin antimicrobial peptide 	ENST00000576243.1|CAMP|ENSG00000164047.3|cathelicidin antimicrobial peptide
hg19_v2_chr20_-_30458354_30458384	0.0489676	HOXA1	ENST00000428829.1|DUSP15|ENSG00000149599.11|dual specificity phosphatase 15
hg19_v2_chr2_+_44396000_44396053	0.0480716	HOXA1	ENST00000409895.4|PPM1B|ENSG00000138032.16|protein phosphatase, Mg2+/Mn2+ dependent, 1B 	ENST00000409432.3|PPM1B|ENSG00000138032.16|protein phosphatase, Mg2+/Mn2+ dependent, 1B 	ENST00000282412.4|PPM1B|ENSG00000138032.16|protein phosphatase, Mg2+/Mn2+ dependent, 1B 	ENST00000378551.2|PPM1B|ENSG00000138032.16|protein phosphatase, Mg2+/Mn2+ dependent, 1B 	ENST00000345249.4|PPM1B|ENSG00000138032.16|protein phosphatase, Mg2+/Mn2+ dependent, 1B
hg19_v2_chr16_+_28985542_28985642	0.0478506	HOXA1	ENST00000567771.1|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila) 	ENST00000568388.1|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila)
hg19_v2_chr19_+_58193337_58193386	0.0478346	HOXA1	ENST00000601064.1|ZNF551|ENSG00000204519.6|zinc finger protein 551 	ENST00000282296.5|ZNF551|ENSG00000204519.6|zinc finger protein 551 	ENST00000356715.4|ZNF551|ENSG00000204519.6|zinc finger protein 551
hg19_v2_chr12_+_57610562_57610608	0.0472555	HOXA1	ENST00000349394.5|NXPH4|ENSG00000182379.9|neurexophilin 4
hg19_v2_chr12_+_57998400_57998422	0.0466848	HOXA1	ENST00000548804.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000550596.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000551835.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000549583.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila)
hg19_v2_chr6_-_47009996_47010035	0.0464359	HOXA1	ENST00000371243.2|GPR110|ENSG00000153292.11|G protein-coupled receptor 110
hg19_v2_chr10_-_75012360_75012451	0.0462379	HOXA1	ENST00000416782.2|MRPS16|ENSG00000182180.9|mitochondrial ribosomal protein S16 	ENST00000372945.3|MRPS16|ENSG00000182180.9|mitochondrial ribosomal protein S16 	ENST00000372940.3|MRPS16|ENSG00000182180.9|mitochondrial ribosomal protein S16
hg19_v2_chr19_+_58193388_58193413	0.0451941	HOXA1	ENST00000596085.1|ZNF551|ENSG00000204519.6|zinc finger protein 551 	ENST00000594684.1|AC003006.7|ENSG00000269026.2|Uncharacterized protein
hg19_v2_chr7_+_30174574_30174655	0.045159	HOXA1	ENST00000409688.1|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr1_+_68150744_68150890	0.0447324	HOXA1	ENST00000370986.4|GADD45A|ENSG00000116717.7|growth arrest and DNA-damage-inducible, alpha 	ENST00000370985.3|GADD45A|ENSG00000116717.7|growth arrest and DNA-damage-inducible, alpha
hg19_v2_chr22_+_25615489_25615544	0.0446992	HOXA1	ENST00000398215.2|CRYBB2|ENSG00000244752.2|crystallin, beta B2
hg19_v2_chr14_+_24702127_24702154	0.0439582	HOXA1	ENST00000557854.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000348719.7|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000559104.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000456667.3|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2
hg19_v2_chr12_+_54402790_54402832	0.0439324	HOXA1	ENST00000040584.4|HOXC8|ENSG00000037965.4|homeobox C8
hg19_v2_chr11_+_66247478_66247503	0.0438733	HOXA1	ENST00000531863.1|DPP3|ENSG00000254986.3|dipeptidyl-peptidase 3 	ENST00000532677.1|DPP3|ENSG00000254986.3|dipeptidyl-peptidase 3
hg19_v2_chr9_+_10613163_10613202	0.0437491	HOXA1	ENST00000429581.2|RP11-87N24.2|ENSG00000226717.2|RP11-87N24.2
hg19_v2_chr9_+_2717502_2717524	0.0433591	HOXA1	ENST00000382082.3|KCNV2|ENSG00000168263.8|potassium channel, subfamily V, member 2
hg19_v2_chr12_-_96794330_96794375	0.0426003	HOXA1	ENST00000261211.3|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr7_-_126892303_126892435	0.0423373	HOXA1	ENST00000358373.3|GRM8|ENSG00000179603.13|glutamate receptor, metabotropic 8
hg19_v2_chr20_+_8112824_8112925	0.0422704	HOXA1	ENST00000378641.3|PLCB1|ENSG00000182621.12|phospholipase C, beta 1 (phosphoinositide-specific)
hg19_v2_chr16_+_53920795_53920842	0.0418716	HOXA1	ENST00000431610.2|FTO|ENSG00000140718.14|fat mass and obesity associated 	ENST00000460382.1|FTO|ENSG00000140718.14|fat mass and obesity associated
hg19_v2_chr5_-_36152031_36152063	0.0417646	HOXA1	ENST00000296603.4|LMBRD2|ENSG00000164187.6|LMBR1 domain containing 2
hg19_v2_chr3_-_49967292_49967327	0.0415385	HOXA1	ENST00000455683.2|MON1A|ENSG00000164077.9|MON1 secretory trafficking family member A
hg19_v2_chr5_+_177433406_177433406	0.0411103	HOXA1	ENST00000504530.1|FAM153C|ENSG00000204677.6|family with sequence similarity 153, member C
hg19_v2_chr14_+_96949319_96949444	0.040735	HOXA1	ENST00000554706.1|AK7|ENSG00000140057.4|adenylate kinase 7
hg19_v2_chr11_+_5509915_5509915	0.0405082	HOXA1	ENST00000322641.5|OR52D1|ENSG00000181609.5|olfactory receptor, family 52, subfamily D, member 1
hg19_v2_chr17_-_38821373_38821440	0.0403653	HOXA1	ENST00000394052.3|KRT222|ENSG00000213424.4|keratin 222
hg19_v2_chr1_+_45140360_45140399	0.0399226	HOXA1	ENST00000418644.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000458657.2|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000441519.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000535358.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000445071.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228
hg19_v2_chr9_+_35829208_35829308	0.0393714	HOXA1	ENST00000439587.2|TMEM8B|ENSG00000137103.12|transmembrane protein 8B 	ENST00000377991.4|TMEM8B|ENSG00000137103.12|transmembrane protein 8B
hg19_v2_chr2_-_158345341_158345449	0.0391854	HOXA1	ENST00000435117.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein
hg19_v2_chr14_+_24779376_24779394	0.0390734	HOXA1	ENST00000530080.1|LTB4R2|ENSG00000213906.5|leukotriene B4 receptor 2
hg19_v2_chrX_+_9431324_9431371	0.0388473	HOXA1	ENST00000407597.2|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000424279.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000536365.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000441088.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000380961.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000415293.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr16_+_29674540_29674600	0.0379057	HOXA1	ENST00000436527.1|SPN|ENSG00000197471.7|sialophorin 	ENST00000360121.3|SPN|ENSG00000197471.7|sialophorin 	ENST00000449759.1|QPRT|ENSG00000103485.13|quinolinate phosphoribosyltransferase
hg19_v2_chr15_+_101402041_101402067	0.0378714	HOXA1	ENST00000558475.1|RP11-66B24.1|ENSG00000259604.1|RP11-66B24.1	ENST00000558641.1|RP11-66B24.1|ENSG00000259604.1|RP11-66B24.1	ENST00000559673.1|RP11-66B24.1|ENSG00000259604.1|RP11-66B24.1
hg19_v2_chr2_+_74685527_74685599	0.0375197	HOXA1	ENST00000393972.3|WBP1|ENSG00000239779.2|WW domain binding protein 1 	ENST00000409737.1|WBP1|ENSG00000239779.2|WW domain binding protein 1 	ENST00000428943.1|WBP1|ENSG00000239779.2|WW domain binding protein 1
hg19_v2_chr12_+_58148842_58148929	0.0374093	HOXA1	ENST00000266643.5|MARCH9|ENSG00000139266.5|membrane-associated ring finger (C3HC4) 9
hg19_v2_chr4_+_79567362_79567380	0.0371382	HOXA1	ENST00000512322.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094
hg19_v2_chr4_+_86396265_86396276	0.0368107	HOXA1	ENST00000395184.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr16_-_49890016_49890046	0.0367504	HOXA1	ENST00000563137.2|ZNF423|ENSG00000102935.7|zinc finger protein 423
hg19_v2_chr4_-_73434498_73434516	0.0364776	HOXA1	ENST00000286657.4|ADAMTS3|ENSG00000156140.4|ADAM metallopeptidase with thrombospondin type 1 motif, 3
hg19_v2_chr1_+_46152886_46153034	0.0364	HOXA1	ENST00000372025.4|TMEM69|ENSG00000159596.6|transmembrane protein 69
hg19_v2_chr16_+_610407_610429	0.0357121	HOXA1	ENST00000409413.3|C16orf11|ENSG00000161992.5|chromosome 16 open reading frame 11
hg19_v2_chr13_+_36050881_36050887	0.0355201	HOXA1	ENST00000537702.1|NBEA|ENSG00000172915.14|neurobeachin
hg19_v2_chr11_+_7626950_7626971	0.0349923	HOXA1	ENST00000530181.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chrX_+_48455866_48455905	0.0346225	HOXA1	ENST00000376729.5|WDR13|ENSG00000101940.13|WD repeat domain 13 	ENST00000218056.5|WDR13|ENSG00000101940.13|WD repeat domain 13
hg19_v2_chr10_+_7745303_7745363	0.0329893	HOXA1	ENST00000429820.1|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2 	ENST00000379587.4|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v2_chr10_+_18689637_18689742	0.0325693	HOXA1	ENST00000377315.4|CACNB2|ENSG00000165995.14|calcium channel, voltage-dependent, beta 2 subunit
hg19_v2_chr13_-_46425865_46425902	0.0323028	HOXA1	ENST00000400405.2|SIAH3|ENSG00000215475.3|siah E3 ubiquitin protein ligase family member 3
hg19_v2_chr11_+_63706444_63706486	0.0319747	HOXA1	ENST00000377793.4|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000456907.2|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000539656.1|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit
hg19_v2_chr1_-_92351769_92351787	0.031682	HOXA1	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr2_+_238600933_238600985	0.0313655	HOXA1	ENST00000420665.1|LRRFIP1|ENSG00000124831.14|leucine rich repeat (in FLII) interacting protein 1 	ENST00000392000.4|LRRFIP1|ENSG00000124831.14|leucine rich repeat (in FLII) interacting protein 1
hg19_v2_chr7_-_101212244_101212286	0.0307939	HOXA1	ENST00000451953.1|LINC01007|ENSG00000233123.1|long intergenic non-protein coding RNA 1007 	ENST00000434537.1|LINC01007|ENSG00000233123.1|long intergenic non-protein coding RNA 1007 	ENST00000437900.1|LINC01007|ENSG00000233123.1|long intergenic non-protein coding RNA 1007
hg19_v2_chr10_-_102045882_102045905	0.030731	HOXA1	ENST00000579542.1|BLOC1S2|ENSG00000196072.7|biogenesis of lysosomal organelles complex-1, subunit 2
hg19_v2_chr10_+_7745232_7745295	0.0305738	HOXA1	ENST00000358415.4|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v2_chr11_-_126870683_126870706	0.0304966	HOXA1	ENST00000525704.2|KIRREL3|ENSG00000149571.6|kin of IRRE like 3 (Drosophila)
hg19_v2_chr8_-_101734907_101735037	0.0300479	HOXA1	ENST00000318607.5|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000521865.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000520804.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000522720.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000521067.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr3_-_112564797_112564797	0.0300373	HOXA1	ENST00000398214.1|CD200R1L|ENSG00000206531.6|CD200 receptor 1-like 	ENST00000448932.1|CD200R1L|ENSG00000206531.6|CD200 receptor 1-like
hg19_v2_chr1_-_13452656_13452656	0.029888	HOXA1	ENST00000376132.3|PRAMEF13|ENSG00000204495.3|PRAME family member 13
hg19_v2_chr12_+_8276495_8276523	0.0298543	HOXA1	ENST00000546339.1|CLEC4A|ENSG00000111729.8|C-type lectin domain family 4, member A
hg19_v2_chr17_-_26989136_26989218	0.0295232	HOXA1	ENST00000247020.4|SDF2|ENSG00000132581.5|stromal cell-derived factor 2
hg19_v2_chr7_-_115670792_115670798	0.0291477	HOXA1	ENST00000265440.7|TFEC|ENSG00000105967.11|transcription factor EC 	ENST00000393485.1|TFEC|ENSG00000105967.11|transcription factor EC
hg19_v2_chr14_-_81408093_81408129	0.0286517	HOXA1	ENST00000555265.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa
hg19_v2_chr10_-_28270795_28270809	0.0281424	HOXA1	ENST00000545014.1|ARMC4|ENSG00000169126.11|armadillo repeat containing 4
hg19_v2_chr7_-_994302_994333	0.0278593	HOXA1	ENST00000265846.5|ADAP1|ENSG00000105963.9|ArfGAP with dual PH domains 1
hg19_v2_chr7_+_77469439_77469497	0.0278276	HOXA1	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chrX_-_13835147_13835224	0.0273462	HOXA1	ENST00000493677.1|GPM6B|ENSG00000046653.10|glycoprotein M6B 	ENST00000355135.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr2_+_71205510_71205637	0.0273165	HOXA1	ENST00000272421.6|ANKRD53|ENSG00000144031.7|ankyrin repeat domain 53 	ENST00000441349.1|ANKRD53|ENSG00000144031.7|ankyrin repeat domain 53 	ENST00000457410.1|ANKRD53|ENSG00000144031.7|ankyrin repeat domain 53
hg19_v2_chr7_+_23637763_23637780	0.027036	HOXA1	ENST00000410069.1|CCDC126|ENSG00000169193.7|coiled-coil domain containing 126
hg19_v2_chr22_-_29711645_29711694	0.0268051	HOXA1	ENST00000401450.3|RASL10A|ENSG00000100276.9|RAS-like, family 10, member A
hg19_v2_chr17_-_79359154_79359164	0.0260683	HOXA1	ENST00000572077.1|RP11-1055B8.3|ENSG00000262223.2|RP11-1055B8.3
hg19_v2_chrX_+_57618269_57618269	0.0258589	HOXA1	ENST00000374888.1|ZXDB|ENSG00000198455.3|zinc finger, X-linked, duplicated B
hg19_v2_chr7_-_22233442_22233527	0.0252545	HOXA1	ENST00000401957.2|RAPGEF5|ENSG00000136237.14|Rap guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr8_-_97247759_97247862	0.0251197	HOXA1	ENST00000518406.1|UQCRB|ENSG00000156467.5|ubiquinol-cytochrome c reductase binding protein 	ENST00000523920.1|UQCRB|ENSG00000156467.5|ubiquinol-cytochrome c reductase binding protein 	ENST00000287022.5|UQCRB|ENSG00000156467.5|ubiquinol-cytochrome c reductase binding protein
hg19_v2_chr16_-_55867146_55867249	0.0249339	HOXA1	ENST00000422046.2|CES1|ENSG00000198848.8|carboxylesterase 1
hg19_v2_chr10_-_16563870_16564004	0.0238044	HOXA1	ENST00000298943.3|C1QL3|ENSG00000165985.8|complement component 1, q subcomponent-like 3
hg19_v2_chr19_+_7743387_7743387	0.0237065	HOXA1	ENST00000597959.1|CTD-3214H19.16|ENSG00000269711.1|CTD-3214H19.16
hg19_v2_chr1_+_178062855_178062903	0.0235172	HOXA1	ENST00000448150.3|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chr3_+_179322573_179322614	0.0230485	HOXA1	ENST00000493866.1|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 	ENST00000472629.1|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 	ENST00000482604.1|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg19_v2_chr7_+_141418962_141418962	0.0230464	HOXA1	ENST00000493845.1|WEE2|ENSG00000214102.3|WEE1 homolog 2 (S. pombe)
hg19_v2_chr20_-_30458432_30458483	0.0228165	HOXA1	ENST00000375966.4|DUSP15|ENSG00000149599.11|dual specificity phosphatase 15 	ENST00000278979.3|DUSP15|ENSG00000149599.11|dual specificity phosphatase 15
hg19_v2_chrX_-_25034065_25034088	0.0227639	HOXA1	ENST00000379044.4|ARX|ENSG00000004848.6|aristaless related homeobox
hg19_v2_chr6_+_73331520_73331578	0.0222772	HOXA1	ENST00000342056.2|KCNQ5|ENSG00000185760.11|potassium voltage-gated channel, KQT-like subfamily, member 5 	ENST00000355194.4|KCNQ5|ENSG00000185760.11|potassium voltage-gated channel, KQT-like subfamily, member 5
hg19_v2_chr8_+_22132810_22132844	0.0221732	HOXA1	ENST00000356766.6|PIWIL2|ENSG00000197181.7|piwi-like RNA-mediated gene silencing 2
hg19_v2_chr20_+_30458431_30458505	0.0216438	HOXA1	ENST00000375938.4|TTLL9|ENSG00000131044.12|tubulin tyrosine ligase-like family, member 9 	ENST00000535842.1|TTLL9|ENSG00000131044.12|tubulin tyrosine ligase-like family, member 9 	ENST00000310998.4|TTLL9|ENSG00000131044.12|tubulin tyrosine ligase-like family, member 9 	ENST00000375921.2|TTLL9|ENSG00000131044.12|tubulin tyrosine ligase-like family, member 9
hg19_v2_chr9_-_116037840_116037876	0.0212294	HOXA1	ENST00000374206.3|CDC26|ENSG00000176386.4|cell division cycle 26
hg19_v2_chr14_+_91709103_91709103	0.0211438	HOXA1	ENST00000553725.1|CTD-2547L24.3|ENSG00000258875.1|HCG1816139; Uncharacterized protein
hg19_v2_chr12_-_86650077_86650095	0.0210878	HOXA1	ENST00000552808.2|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENST00000547225.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr11_-_72070206_72070250	0.0207255	HOXA1	ENST00000544382.1|CLPB|ENSG00000162129.8|ClpB caseinolytic peptidase B homolog (E. coli)
hg19_v2_chr16_+_23847339_23847350	0.0203024	HOXA1	ENST00000303531.7|PRKCB|ENSG00000166501.8|protein kinase C, beta
hg19_v2_chr19_+_58180303_58180303	0.0201092	HOXA1	ENST00000318203.5|ZSCAN4|ENSG00000180532.6|zinc finger and SCAN domain containing 4
hg19_v2_chr16_+_30034655_30034722	0.0198114	HOXA1	ENST00000300575.2|C16orf92|ENSG00000167194.3|chromosome 16 open reading frame 92
hg19_v2_chr3_+_179322481_179322494	0.0188973	HOXA1	ENST00000259037.3|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg19_v2_chr12_+_123459127_123459364	0.0188633	HOXA1	ENST00000397389.2|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000538755.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000536150.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000545056.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000545612.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000538628.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000545317.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2
hg19_v2_chr2_-_219433014_219433100	0.0188595	HOXA1	ENST00000418019.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000454775.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000338465.5|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000415516.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000258399.3|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37
hg19_v2_chr17_-_4269768_4269835	0.0186723	HOXA1	ENST00000396981.2|UBE2G1|ENSG00000132388.8|ubiquitin-conjugating enzyme E2G 1
hg19_v2_chr13_-_24471194_24471194	0.0181667	HOXA1	ENST00000382137.3|C1QTNF9B|ENSG00000205863.5|C1q and tumor necrosis factor related protein 9B 	ENST00000382057.3|C1QTNF9B|ENSG00000205863.5|C1q and tumor necrosis factor related protein 9B
hg19_v2_chr17_-_15502111_15502111	0.0179229	HOXA1	ENST00000354433.3|CDRT1|ENSG00000241322.4|CMT1A duplicated region transcript 1
hg19_v2_chr2_+_264913_264964	0.0175636	HOXA1	ENST00000439645.2|ACP1|ENSG00000143727.11|acid phosphatase 1, soluble 	ENST00000405233.1|ACP1|ENSG00000143727.11|acid phosphatase 1, soluble
hg19_v2_chrX_+_54834791_54834832	0.0173646	HOXA1	ENST00000218439.4|MAGED2|ENSG00000102316.12|melanoma antigen family D, 2 	ENST00000375058.1|MAGED2|ENSG00000102316.12|melanoma antigen family D, 2 	ENST00000375060.1|MAGED2|ENSG00000102316.12|melanoma antigen family D, 2
hg19_v2_chr12_-_21927736_21927768	0.0168325	HOXA1	ENST00000240662.2|KCNJ8|ENSG00000121361.3|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v2_chr6_-_36725157_36725188	0.0168295	HOXA1	ENST00000393189.2|CPNE5|ENSG00000124772.7|copine V
hg19_v2_chr19_+_33072373_33072432	0.0166517	HOXA1	ENST00000586035.1|PDCD5|ENSG00000105185.7|programmed cell death 5
hg19_v2_chr19_-_42927251_42927355	0.0165303	HOXA1	ENST00000597001.1|LIPE|ENSG00000079435.5|lipase, hormone-sensitive
hg19_v2_chr2_+_74685413_74685456	0.0165152	HOXA1	ENST00000233615.2|WBP1|ENSG00000239779.2|WW domain binding protein 1
hg19_v2_chr1_+_202976493_202976530	0.0162044	HOXA1	ENST00000367242.3|TMEM183A|ENSG00000163444.7|transmembrane protein 183A
hg19_v2_chr4_+_79567314_79567348	0.0150744	HOXA1	ENST00000503539.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094 	ENST00000504675.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094
hg19_v2_chr1_+_236557569_236557578	0.0149515	HOXA1	ENST00000334232.4|EDARADD|ENSG00000186197.8|EDAR-associated death domain
hg19_v2_chr2_+_161993412_161993453	0.0145619	HOXA1	ENST00000259075.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000432002.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr1_+_154975258_154975330	0.0143913	HOXA1	ENST00000417934.2|ZBTB7B|ENSG00000160685.9|zinc finger and BTB domain containing 7B
hg19_v2_chr20_+_44036900_44036984	0.0140348	HOXA1	ENST00000443296.1|DBNDD2|ENSG00000244274.3|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v2_chr10_-_103599591_103599635	0.0138217	HOXA1	ENST00000348850.5|KCNIP2|ENSG00000120049.14|Kv channel interacting protein 2
hg19_v2_chr1_+_240255166_240255197	0.0131955	HOXA1	ENST00000319653.9|FMN2|ENSG00000155816.15|formin 2
hg19_v2_chr1_+_154975110_154975149	0.0131516	HOXA1	ENST00000535420.1|ZBTB7B|ENSG00000160685.9|zinc finger and BTB domain containing 7B 	ENST00000368426.3|ZBTB7B|ENSG00000160685.9|zinc finger and BTB domain containing 7B
hg19_v2_chr3_-_56950407_56950499	0.0129437	HOXA1	ENST00000496106.1|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3
hg19_v2_chr19_-_5680891_5680951	0.0127168	HOXA1	ENST00000309324.4|C19orf70|ENSG00000174917.4|chromosome 19 open reading frame 70
hg19_v2_chr19_+_13875316_13875385	0.0115411	HOXA1	ENST00000319545.8|MRI1|ENSG00000037757.9|methylthioribose-1-phosphate isomerase 1 	ENST00000593245.1|MRI1|ENSG00000037757.9|methylthioribose-1-phosphate isomerase 1 	ENST00000040663.6|MRI1|ENSG00000037757.9|methylthioribose-1-phosphate isomerase 1
hg19_v2_chr10_-_106240032_106240047	0.0111772	HOXA1	ENST00000447860.1|RP11-127O4.3|ENSG00000225768.1|RP11-127O4.3
hg19_v2_chr10_+_89264625_89264637	0.0102892	HOXA1	ENST00000371996.4|MINPP1|ENSG00000107789.11|multiple inositol-polyphosphate phosphatase 1 	ENST00000371994.4|MINPP1|ENSG00000107789.11|multiple inositol-polyphosphate phosphatase 1
hg19_v2_chr16_+_30080857_30080916	0.0101741	HOXA1	ENST00000565355.1|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr5_-_137071689_137071709	0.00928071	HOXA1	ENST00000505853.1|KLHL3|ENSG00000146021.10|kelch-like family member 3
hg19_v2_chr4_+_2470664_2470882	0.00912685	HOXA1	ENST00000314289.8|RNF4|ENSG00000063978.11|ring finger protein 4 	ENST00000541204.1|RNF4|ENSG00000063978.11|ring finger protein 4 	ENST00000502316.1|RNF4|ENSG00000063978.11|ring finger protein 4 	ENST00000507247.1|RNF4|ENSG00000063978.11|ring finger protein 4 	ENST00000509258.1|RNF4|ENSG00000063978.11|ring finger protein 4 	ENST00000511859.1|RNF4|ENSG00000063978.11|ring finger protein 4
hg19_v2_chr7_-_2354099_2354115	0.00908952	HOXA1	ENST00000222990.3|SNX8|ENSG00000106266.4|sorting nexin 8
hg19_v2_chr18_+_11752783_11752805	0.00908884	HOXA1	ENST00000585642.1|GNAL|ENSG00000141404.11|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v2_chr2_+_166326157_166326216	0.0089578	HOXA1	ENST00000421875.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000314499.7|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000409664.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chr6_-_28973037_28973094	0.0089431	HOXA1	ENST00000377179.3|ZNF311|ENSG00000197935.6|zinc finger protein 311
hg19_v2_chr4_+_166128836_166128975	0.00890787	HOXA1	ENST00000511305.1|KLHL2|ENSG00000109466.9|kelch-like family member 2
hg19_v2_chrX_+_128913906_128913960	0.00835779	HOXA1	ENST00000356892.3|SASH3|ENSG00000122122.9|SAM and SH3 domain containing 3
hg19_v2_chrM_+_9207_9255	0.00829294	HOXA1	ENST00000362079.2|MT-CO3|ENSG00000198938.2|mitochondrially encoded cytochrome c oxidase III
hg19_v2_chr11_-_2162162_2162246	0.0081936	HOXA1	ENST00000381389.1|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A)
hg19_v2_chr10_+_21823079_21823102	0.0080885	HOXA1	ENST00000377100.3|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 	ENST00000377072.3|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 	ENST00000446906.2|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
hg19_v2_chr5_+_36152091_36152114	0.00713736	HOXA1	ENST00000274254.5|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
hg19_v2_chr8_-_114449112_114449328	0.00700211	HOXA1	ENST00000455883.2|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3 	ENST00000352409.3|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3 	ENST00000297405.5|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3
hg19_v2_chr20_+_44036620_44036658	0.00685678	HOXA1	ENST00000372710.3|DBNDD2|ENSG00000244274.3|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v2_chr12_+_10658489_10658489	0.00649228	HOXA1	ENST00000538173.1|EIF2S3L|ENSG00000180574.3|Putative eukaryotic translation initiation factor 2 subunit 3-like protein
hg19_v2_chr1_+_10271674_10271674	0.00630676	HOXA1	ENST00000377086.1|KIF1B|ENSG00000054523.12|kinesin family member 1B
hg19_v2_chr9_+_113431059_113431077	0.00623812	HOXA1	ENST00000416899.2|MUSK|ENSG00000030304.8|muscle, skeletal, receptor tyrosine kinase
hg19_v2_chr7_+_139529085_139529115	0.0057826	HOXA1	ENST00000539806.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr4_-_72649763_72649802	0.00543559	HOXA1	ENST00000513476.1|GC|ENSG00000145321.8|group-specific component (vitamin D binding protein)
hg19_v2_chr13_+_102104980_102105050	0.00534659	HOXA1	ENST00000545560.2|ITGBL1|ENSG00000198542.9|integrin, beta-like 1 (with EGF-like repeat domains)
hg19_v2_chr15_-_43513187_43513251	0.00497606	HOXA1	ENST00000540029.1|EPB42|ENSG00000166947.7|erythrocyte membrane protein band 4.2 	ENST00000441366.2|EPB42|ENSG00000166947.7|erythrocyte membrane protein band 4.2
hg19_v2_chr10_+_60272814_60272900	0.00494855	HOXA1	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr8_+_22250334_22250354	0.00472568	HOXA1	ENST00000520832.1|SLC39A14|ENSG00000104635.9|solute carrier family 39 (zinc transporter), member 14
hg19_v2_chr22_-_19419205_19419280	0.00447986	HOXA1	ENST00000340170.4|HIRA|ENSG00000100084.10|histone cell cycle regulator 	ENST00000263208.5|HIRA|ENSG00000100084.10|histone cell cycle regulator
hg19_v2_chr22_-_41677625_41677652	0.00442806	HOXA1	ENST00000452543.1|RANGAP1|ENSG00000100401.15|Ran GTPase activating protein 1 	ENST00000418067.1|RANGAP1|ENSG00000100401.15|Ran GTPase activating protein 1
hg19_v2_chr5_-_20575959_20575997	0.00397425	HOXA1	ENST00000507958.1|CDH18|ENSG00000145526.7|cadherin 18, type 2
hg19_v2_chrX_+_150148976_150148990	0.00395125	HOXA1	ENST00000419110.1|HMGB3|ENSG00000029993.10|high mobility group box 3
hg19_v2_chr11_+_122753391_122753478	0.00394734	HOXA1	ENST00000307257.6|C11orf63|ENSG00000109944.6|chromosome 11 open reading frame 63 	ENST00000227349.2|C11orf63|ENSG00000109944.6|chromosome 11 open reading frame 63
hg19_v2_chr4_+_154178520_154178562	0.00319035	HOXA1	ENST00000433687.1|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr10_-_98945264_98945380	0.00304094	HOXA1	ENST00000314867.5|SLIT1|ENSG00000187122.12|slit homolog 1 (Drosophila)
hg19_v2_chr16_-_15472151_15472151	0.00274925	HOXA1	ENST00000360151.4|NPIPA5|ENSG00000183793.9|nuclear pore complex interacting protein family, member A5 	ENST00000543801.1|NPIPA5|ENSG00000183793.9|nuclear pore complex interacting protein family, member A5
hg19_v2_chr14_-_106692191_106692211	0.00257921	HOXA1	ENST00000390607.2|IGHV3-21|ENSG00000211947.2|immunoglobulin heavy variable 3-21
hg19_v2_chr2_+_149632783_149632820	0.002466	HOXA1	ENST00000435030.1|KIF5C|ENSG00000168280.12|kinesin family member 5C
hg19_v2_chr7_-_115670804_115670867	0.00231084	HOXA1	ENST00000320239.7|TFEC|ENSG00000105967.11|transcription factor EC
hg19_v2_chr1_+_2005425_2005537	0.00186327	HOXA1	ENST00000461106.2|PRKCZ|ENSG00000067606.11|protein kinase C, zeta
hg19_v2_chr5_+_78532003_78532017	0.00115363	HOXA1	ENST00000396137.4|JMY|ENSG00000152409.8|junction mediating and regulatory protein, p53 cofactor
hg19_v2_chr6_-_15586238_15586256	0.00113542	HOXA1	ENST00000462989.2|DTNBP1|ENSG00000047579.15|dystrobrevin binding protein 1
hg19_v2_chr2_+_181845074_181845118	0.000931596	HOXA1	ENST00000602959.1|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3 	ENST00000602479.1|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3 	ENST00000392415.2|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3 	ENST00000602291.1|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3
hg19_v2_chr16_+_23847267_23847335	0.000873737	HOXA1	ENST00000321728.7|PRKCB|ENSG00000166501.8|protein kinase C, beta
hg19_v2_chr1_+_3614591_3614622	0.000509977	HOXA1	ENST00000378290.4|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr1_+_2160134_2160134	0.000300803	HOXA1	ENST00000378536.4|SKI|ENSG00000157933.9|v-ski avian sarcoma viral oncogene homolog
hg19_v2_chr20_+_36012051_36012071	0.000208392	HOXA1	ENST00000373567.2|SRC|ENSG00000197122.7|v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog
hg19_v2_chr9_+_132962843_132962872	9.07205e-05	HOXA1	ENST00000458469.1|NCS1|ENSG00000107130.6|neuronal calcium sensor 1
