hg19_v2_chrX_-_106959631_106959775	0.386895	GAGAUGA	ENST00000486554.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372390.4|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr3_+_113465866_113465925	0.283468	GAGAUGA	ENST00000273398.3|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000538620.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000496747.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000475322.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
hg19_v2_chr1_+_62208091_62208182	0.277443	GAGAUGA	ENST00000316485.6|INADL|ENSG00000132849.14|InaD-like (Drosophila) 	ENST00000371158.2|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr18_+_9136758_9136852	0.2726	GAGAUGA	ENST00000383440.2|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000262126.4|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000577992.1|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12
hg19_v2_chr4_-_53525406_53525502	0.214761	GAGAUGA	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr13_+_48807288_48807302	0.203776	GAGAUGA	ENST00000378565.5|ITM2B|ENSG00000136156.8|integral membrane protein 2B
hg19_v2_chr3_-_122102065_122102101	0.198951	GAGAUGA	ENST00000479899.1|CCDC58|ENSG00000160124.5|coiled-coil domain containing 58 	ENST00000291458.5|CCDC58|ENSG00000160124.5|coiled-coil domain containing 58 	ENST00000497726.1|CCDC58|ENSG00000160124.5|coiled-coil domain containing 58
hg19_v2_chr14_-_96830207_96830207	0.172843	GAGAUGA	ENST00000359933.4|ATG2B|ENSG00000066739.7|autophagy related 2B
hg19_v2_chr11_+_13690200_13690244	0.145365	GAGAUGA	ENST00000354817.3|FAR1|ENSG00000197601.8|fatty acyl CoA reductase 1
hg19_v2_chr6_-_132272504_132272519	0.136827	GAGAUGA	ENST00000367976.3|CTGF|ENSG00000118523.5|connective tissue growth factor
hg19_v2_chr3_-_37034702_37034795	0.13441	GAGAUGA	ENST00000322716.5|EPM2AIP1|ENSG00000178567.5|EPM2A (laforin) interacting protein 1
hg19_v2_chr17_+_55333876_55333939	0.127148	GAGAUGA	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr17_+_28705921_28706000	0.126803	GAGAUGA	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr12_+_56473628_56473680	0.12182	GAGAUGA	ENST00000549282.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000549061.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000267101.3|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3
hg19_v2_chr9_+_116638562_116638606	0.118219	GAGAUGA	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr5_+_145583156_145583180	0.118114	GAGAUGA	ENST00000265271.5|RBM27|ENSG00000091009.6|RNA binding motif protein 27
hg19_v2_chr3_+_36421826_36421844	0.116447	GAGAUGA	ENST00000273183.3|STAC|ENSG00000144681.6|SH3 and cysteine rich domain
hg19_v2_chr5_-_100238956_100238994	0.115313	GAGAUGA	ENST00000231461.5|ST8SIA4|ENSG00000113532.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v2_chr3_-_52188397_52188450	0.110745	GAGAUGA	ENST00000474012.1|POC1A|ENSG00000164087.3|POC1 centriolar protein A 	ENST00000296484.2|POC1A|ENSG00000164087.3|POC1 centriolar protein A
hg19_v2_chr2_+_173292301_173292332	0.105029	GAGAUGA	ENST00000264106.6|ITGA6|ENSG00000091409.10|integrin, alpha 6 	ENST00000375221.2|ITGA6|ENSG00000091409.10|integrin, alpha 6 	ENST00000343713.4|ITGA6|ENSG00000091409.10|integrin, alpha 6
hg19_v2_chr1_+_87794150_87794172	0.0996364	GAGAUGA	ENST00000370544.5|LMO4|ENSG00000143013.8|LIM domain only 4
hg19_v2_chr9_-_123476719_123476810	0.0975931	GAGAUGA	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr4_+_15004165_15004298	0.0949952	GAGAUGA	ENST00000538197.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000541112.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000442003.2|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2
hg19_v2_chr12_-_65146636_65146651	0.0944707	GAGAUGA	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr12_-_46766577_46766650	0.0942597	GAGAUGA	ENST00000256689.5|SLC38A2|ENSG00000134294.9|solute carrier family 38, member 2
hg19_v2_chr4_+_44680429_44680498	0.0941487	GAGAUGA	ENST00000281543.5|GUF1|ENSG00000151806.9|GUF1 GTPase homolog (S. cerevisiae)
hg19_v2_chr8_-_63998590_63998634	0.0898824	GAGAUGA	ENST00000260116.4|TTPA|ENSG00000137561.4|tocopherol (alpha) transfer protein
hg19_v2_chr20_-_48099182_48099214	0.0877052	GAGAUGA	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr15_-_49338748_49338765	0.0862393	GAGAUGA	ENST00000559471.1|SECISBP2L|ENSG00000138593.4|SECIS binding protein 2-like
hg19_v2_chr6_-_91296602_91296721	0.0841674	GAGAUGA	ENST00000369325.3|MAP3K7|ENSG00000135341.13|mitogen-activated protein kinase kinase kinase 7 	ENST00000369327.3|MAP3K7|ENSG00000135341.13|mitogen-activated protein kinase kinase kinase 7
hg19_v2_chr11_+_86748863_86748948	0.0814345	GAGAUGA	ENST00000340353.7|TMEM135|ENSG00000166575.12|transmembrane protein 135
hg19_v2_chr6_-_99963252_99963264	0.0796038	GAGAUGA	ENST00000392738.2|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45 	ENST00000327681.6|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45 	ENST00000472914.2|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45
hg19_v2_chr10_-_105615164_105615323	0.0793307	GAGAUGA	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr3_-_24536253_24536328	0.0787627	GAGAUGA	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr10_+_111767720_111767752	0.0781999	GAGAUGA	ENST00000356080.4|ADD3|ENSG00000148700.9|adducin 3 (gamma) 	ENST00000277900.8|ADD3|ENSG00000148700.9|adducin 3 (gamma)
hg19_v2_chr19_-_47735918_47736023	0.0711797	GAGAUGA	ENST00000449228.1|BBC3|ENSG00000105327.11|BCL2 binding component 3 	ENST00000300880.7|BBC3|ENSG00000105327.11|BCL2 binding component 3 	ENST00000341983.4|BBC3|ENSG00000105327.11|BCL2 binding component 3
hg19_v2_chr2_+_187350883_187350962	0.0695165	GAGAUGA	ENST00000337859.6|ZC3H15|ENSG00000065548.13|zinc finger CCCH-type containing 15
hg19_v2_chr17_+_38278530_38278605	0.0692472	GAGAUGA	ENST00000398532.4|MSL1|ENSG00000188895.7|male-specific lethal 1 homolog (Drosophila)
hg19_v2_chr20_+_42295745_42295797	0.0678141	GAGAUGA	ENST00000396863.4|MYBL2|ENSG00000101057.11|v-myb avian myeloblastosis viral oncogene homolog-like 2 	ENST00000217026.4|MYBL2|ENSG00000101057.11|v-myb avian myeloblastosis viral oncogene homolog-like 2
hg19_v2_chr14_-_31495569_31495636	0.0675783	GAGAUGA	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chr17_-_46623441_46623441	0.0670309	GAGAUGA	ENST00000330070.4|HOXB2|ENSG00000173917.9|homeobox B2
hg19_v2_chr4_+_99916765_99916776	0.0623793	GAGAUGA	ENST00000296411.6|METAP1|ENSG00000164024.7|methionyl aminopeptidase 1
hg19_v2_chr12_-_31479045_31479074	0.0602913	GAGAUGA	ENST00000539409.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A 	ENST00000395766.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr2_-_190044480_190044605	0.059185	GAGAUGA	ENST00000374866.3|COL5A2|ENSG00000204262.7|collagen, type V, alpha 2
hg19_v2_chr15_+_39873268_39873294	0.05658	GAGAUGA	ENST00000397591.2|THBS1|ENSG00000137801.9|thrombospondin 1 	ENST00000260356.5|THBS1|ENSG00000137801.9|thrombospondin 1
hg19_v2_chr1_+_64936428_64936475	0.0561346	GAGAUGA	ENST00000371073.2|CACHD1|ENSG00000158966.9|cache domain containing 1 	ENST00000290039.5|CACHD1|ENSG00000158966.9|cache domain containing 1
hg19_v2_chr1_-_211752073_211752084	0.0561226	GAGAUGA	ENST00000367001.4|SLC30A1|ENSG00000170385.9|solute carrier family 30 (zinc transporter), member 1
hg19_v2_chr18_-_29522989_29523104	0.0535682	GAGAUGA	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr1_+_110527308_110527349	0.0534787	GAGAUGA	ENST00000369799.5|AHCYL1|ENSG00000168710.13|adenosylhomocysteinase-like 1
hg19_v2_chr13_+_45563721_45563755	0.0531369	GAGAUGA	ENST00000361121.2|GPALPP1|ENSG00000133114.13|GPALPP motifs containing 1
hg19_v2_chr17_+_65821780_65821826	0.0531111	GAGAUGA	ENST00000321892.4|BPTF|ENSG00000171634.12|bromodomain PHD finger transcription factor 	ENST00000335221.5|BPTF|ENSG00000171634.12|bromodomain PHD finger transcription factor 	ENST00000306378.6|BPTF|ENSG00000171634.12|bromodomain PHD finger transcription factor
hg19_v2_chr16_+_67063036_67063088	0.0528054	GAGAUGA	ENST00000290858.6|CBFB|ENSG00000067955.9|core-binding factor, beta subunit 	ENST00000564034.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr20_+_30865429_30865480	0.0523257	GAGAUGA	ENST00000375712.3|KIF3B|ENSG00000101350.6|kinesin family member 3B
hg19_v2_chr2_+_172778952_172779004	0.0522857	GAGAUGA	ENST00000392584.1|HAT1|ENSG00000128708.8|histone acetyltransferase 1 	ENST00000264108.4|HAT1|ENSG00000128708.8|histone acetyltransferase 1
hg19_v2_chr6_+_155054459_155054561	0.049887	GAGAUGA	ENST00000367178.3|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8 	ENST00000417268.1|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8 	ENST00000367186.4|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8
hg19_v2_chr1_+_178062855_178062903	0.0492616	GAGAUGA	ENST00000448150.3|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chrX_-_48858630_48858660	0.049043	GAGAUGA	ENST00000376425.3|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1 	ENST00000376444.3|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1
hg19_v2_chr11_-_9336234_9336327	0.0487084	GAGAUGA	ENST00000528080.1|TMEM41B|ENSG00000166471.6|transmembrane protein 41B
hg19_v2_chrX_+_133507327_133507386	0.0479055	GAGAUGA	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chr15_-_100258029_100258029	0.0469191	GAGAUGA	ENST00000378904.2|DKFZP779J2370|ENSG00000214397.2|DKFZP779J2370
hg19_v2_chr1_+_89990431_89990493	0.046512	GAGAUGA	ENST00000330947.2|LRRC8B|ENSG00000197147.8|leucine rich repeat containing 8 family, member B 	ENST00000358200.4|LRRC8B|ENSG00000197147.8|leucine rich repeat containing 8 family, member B
hg19_v2_chr14_-_31676964_31677017	0.0456353	GAGAUGA	ENST00000553700.1|HECTD1|ENSG00000092148.8|HECT domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr12_-_25403737_25403881	0.0427324	GAGAUGA	ENST00000256078.4|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000556131.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000311936.3|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000557334.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog
hg19_v2_chr17_-_28618948_28619023	0.0417162	GAGAUGA	ENST00000261714.6|BLMH|ENSG00000108578.10|bleomycin hydrolase
hg19_v2_chr4_+_128703295_128703496	0.0414509	GAGAUGA	ENST00000296464.4|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like 	ENST00000508549.1|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like
hg19_v2_chr11_-_130184555_130184581	0.0396904	GAGAUGA	ENST00000525842.1|ZBTB44|ENSG00000196323.7|zinc finger and BTB domain containing 44
hg19_v2_chr1_+_27153173_27153230	0.0383135	GAGAUGA	ENST00000374142.4|ZDHHC18|ENSG00000204160.7|zinc finger, DHHC-type containing 18
hg19_v2_chr20_+_2673383_2673525	0.0380996	GAGAUGA	ENST00000380648.4|EBF4|ENSG00000088881.16|early B-cell factor 4 	ENST00000342725.5|EBF4|ENSG00000088881.16|early B-cell factor 4
hg19_v2_chr5_+_32711419_32711540	0.0371495	GAGAUGA	ENST00000265074.8|NPR3|ENSG00000113389.11|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)
hg19_v2_chr12_+_112856690_112856731	0.0346924	GAGAUGA	ENST00000392597.1|PTPN11|ENSG00000179295.11|protein tyrosine phosphatase, non-receptor type 11 	ENST00000351677.2|PTPN11|ENSG00000179295.11|protein tyrosine phosphatase, non-receptor type 11
hg19_v2_chr5_+_141488070_141488094	0.03446	GAGAUGA	ENST00000253814.4|NDFIP1|ENSG00000131507.9|Nedd4 family interacting protein 1
hg19_v2_chr7_+_142985308_142985453	0.0339554	GAGAUGA	ENST00000310447.5|CASP2|ENSG00000106144.15|caspase 2, apoptosis-related cysteine peptidase
hg19_v2_chr1_+_51701924_51702001	0.0329581	GAGAUGA	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chrX_-_109561294_109561467	0.0328369	GAGAUGA	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr20_-_50159198_50159299	0.0323649	GAGAUGA	ENST00000371564.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000396009.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000610033.1|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg19_v2_chr1_-_186649543_186649563	0.0317016	GAGAUGA	ENST00000367468.5|PTGS2|ENSG00000073756.7|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr3_+_72937182_72937270	0.0313845	GAGAUGA	ENST00000389617.4|GXYLT2|ENSG00000172986.8|glucoside xylosyltransferase 2
hg19_v2_chr17_+_56160768_56160786	0.0306439	GAGAUGA	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr17_+_38219063_38219154	0.0302585	GAGAUGA	ENST00000584985.1|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000264637.4|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000450525.2|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha
hg19_v2_chr13_+_73632897_73632930	0.029993	GAGAUGA	ENST00000377687.4|KLF5|ENSG00000102554.9|Kruppel-like factor 5 (intestinal)
hg19_v2_chr19_+_3359561_3359681	0.0286416	GAGAUGA	ENST00000589123.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000346156.5|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000395111.3|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000586919.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor)
hg19_v2_chr2_+_97481974_97482015	0.028434	GAGAUGA	ENST00000377060.3|CNNM3|ENSG00000168763.11|cyclin M3 	ENST00000305510.3|CNNM3|ENSG00000168763.11|cyclin M3
hg19_v2_chr17_+_14204389_14204416	0.0278404	GAGAUGA	ENST00000360954.2|HS3ST3B1|ENSG00000125430.4|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
hg19_v2_chr9_-_113342160_113342214	0.0277845	GAGAUGA	ENST00000401783.2|SVEP1|ENSG00000165124.13|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 	ENST00000374461.1|SVEP1|ENSG00000165124.13|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
hg19_v2_chr4_-_24914508_24914524	0.0268515	GAGAUGA	ENST00000504487.1|CCDC149|ENSG00000181982.13|coiled-coil domain containing 149
hg19_v2_chr15_-_68724490_68724516	0.0267406	GAGAUGA	ENST00000315757.7|ITGA11|ENSG00000137809.12|integrin, alpha 11 	ENST00000423218.2|ITGA11|ENSG00000137809.12|integrin, alpha 11
hg19_v2_chr1_-_115259337_115259515	0.0266017	GAGAUGA	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr10_+_76871454_76871467	0.0262565	GAGAUGA	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr1_-_231560790_231560790	0.0255574	GAGAUGA	ENST00000366641.3|EGLN1|ENSG00000135766.8|egl-9 family hypoxia-inducible factor 1
hg19_v2_chr12_+_12764773_12764852	0.0248313	GAGAUGA	ENST00000228865.2|CREBL2|ENSG00000111269.2|cAMP responsive element binding protein-like 2
hg19_v2_chr13_+_28813645_28813770	0.0244493	GAGAUGA	ENST00000282391.5|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chrX_-_63425561_63425624	0.0238878	GAGAUGA	ENST00000374869.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1 	ENST00000330258.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1
hg19_v2_chr22_-_22221900_22221970	0.0233846	GAGAUGA	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr7_+_127292234_127292260	0.0228815	GAGAUGA	ENST00000354725.3|SND1|ENSG00000197157.6|staphylococcal nuclease and tudor domain containing 1
hg19_v2_chr14_+_90863327_90863356	0.0224587	GAGAUGA	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr17_+_57784826_57784883	0.0220886	GAGAUGA	ENST00000262291.4|VMP1|ENSG00000062716.6|vacuole membrane protein 1
hg19_v2_chr4_+_87856129_87856186	0.0219571	GAGAUGA	ENST00000395146.4|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1 	ENST00000507468.1|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1
hg19_v2_chr11_-_77532050_77532066	0.0218878	GAGAUGA	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr6_+_107811162_107811196	0.0218244	GAGAUGA	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chr11_+_118477144_118477156	0.0211354	GAGAUGA	ENST00000361417.2|PHLDB1|ENSG00000019144.12|pleckstrin homology-like domain, family B, member 1
hg19_v2_chr2_-_118771701_118771727	0.0210581	GAGAUGA	ENST00000376300.2|CCDC93|ENSG00000125633.6|coiled-coil domain containing 93 	ENST00000319432.5|CCDC93|ENSG00000125633.6|coiled-coil domain containing 93
hg19_v2_chr15_+_65134088_65134147	0.0208412	GAGAUGA	ENST00000323544.4|PLEKHO2|ENSG00000241839.5|pleckstrin homology domain containing, family O member 2 	ENST00000437723.1|AC069368.3|ENSG00000249240.2|Uncharacterized protein
hg19_v2_chr5_+_71403061_71403169	0.0207813	GAGAUGA	ENST00000512974.1|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B 	ENST00000296755.7|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B
hg19_v2_chr2_-_180129484_180129574	0.020005	GAGAUGA	ENST00000428443.3|SESTD1|ENSG00000187231.9|SEC14 and spectrin domains 1
hg19_v2_chr8_-_38853990_38854061	0.0199821	GAGAUGA	ENST00000456845.2|TM2D2|ENSG00000169490.12|TM2 domain containing 2 	ENST00000397070.2|TM2D2|ENSG00000169490.12|TM2 domain containing 2 	ENST00000517872.1|TM2D2|ENSG00000169490.12|TM2 domain containing 2 	ENST00000412303.1|TM2D2|ENSG00000169490.12|TM2 domain containing 2 	ENST00000456397.2|TM2D2|ENSG00000169490.12|TM2 domain containing 2
hg19_v2_chr4_+_77870856_77870919	0.0199552	GAGAUGA	ENST00000264893.6|SEPT11|ENSG00000138758.7|septin 11 	ENST00000502584.1|SEPT11|ENSG00000138758.7|septin 11 	ENST00000510641.1|SEPT11|ENSG00000138758.7|septin 11
hg19_v2_chr4_-_79860506_79860600	0.0198613	GAGAUGA	ENST00000295462.3|PAQR3|ENSG00000163291.10|progestin and adipoQ receptor family member III 	ENST00000380645.4|PAQR3|ENSG00000163291.10|progestin and adipoQ receptor family member III 	ENST00000512733.1|PAQR3|ENSG00000163291.10|progestin and adipoQ receptor family member III
hg19_v2_chr20_-_40247133_40247194	0.0198418	GAGAUGA	ENST00000373233.3|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6 	ENST00000309279.7|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6
hg19_v2_chr3_-_125094093_125094198	0.0198389	GAGAUGA	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr2_+_75061108_75061265	0.0197085	GAGAUGA	ENST00000290573.2|HK2|ENSG00000159399.5|hexokinase 2
hg19_v2_chr19_+_37960240_37960299	0.0196835	GAGAUGA	ENST00000388801.3|ZNF570|ENSG00000171827.6|zinc finger protein 570
hg19_v2_chr3_+_9975497_9975553	0.0192235	GAGAUGA	ENST00000397170.3|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1 	ENST00000383811.3|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1 	ENST00000452070.1|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1 	ENST00000326434.5|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1
hg19_v2_chr5_+_139944024_139944054	0.0188544	GAGAUGA	ENST00000323146.3|SLC35A4|ENSG00000176087.10|solute carrier family 35, member A4
hg19_v2_chr15_+_44719394_44719579	0.0185966	GAGAUGA	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr6_+_163835669_163835693	0.0182926	GAGAUGA	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr10_-_30024716_30024739	0.018156	GAGAUGA	ENST00000375398.2|SVIL|ENSG00000197321.10|supervillin 	ENST00000375400.3|SVIL|ENSG00000197321.10|supervillin
hg19_v2_chr10_+_65281123_65281183	0.0177102	GAGAUGA	ENST00000298249.4|REEP3|ENSG00000165476.8|receptor accessory protein 3 	ENST00000373758.4|REEP3|ENSG00000165476.8|receptor accessory protein 3
hg19_v2_chr15_+_31619013_31619095	0.0174443	GAGAUGA	ENST00000307145.3|KLF13|ENSG00000169926.5|Kruppel-like factor 13
hg19_v2_chr6_-_33282163_33282211	0.0172518	GAGAUGA	ENST00000434618.2|TAPBP|ENSG00000231925.7|TAP binding protein (tapasin) 	ENST00000456592.2|TAPBP|ENSG00000231925.7|TAP binding protein (tapasin)
hg19_v2_chr1_-_40137710_40137824	0.017065	GAGAUGA	ENST00000235628.1|NT5C1A|ENSG00000116981.3|5'-nucleotidase, cytosolic IA
hg19_v2_chr8_-_105601134_105601252	0.0169754	GAGAUGA	ENST00000276654.5|LRP12|ENSG00000147650.7|low density lipoprotein receptor-related protein 12 	ENST00000424843.2|LRP12|ENSG00000147650.7|low density lipoprotein receptor-related protein 12
hg19_v2_chr15_+_77287426_77287487	0.0169388	GAGAUGA	ENST00000558012.1|PSTPIP1|ENSG00000140368.8|proline-serine-threonine phosphatase interacting protein 1 	ENST00000267939.5|PSTPIP1|ENSG00000140368.8|proline-serine-threonine phosphatase interacting protein 1 	ENST00000379595.3|PSTPIP1|ENSG00000140368.8|proline-serine-threonine phosphatase interacting protein 1
hg19_v2_chr5_-_159846399_159846412	0.0158461	GAGAUGA	ENST00000297151.4|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr7_-_128695147_128695203	0.0148644	GAGAUGA	ENST00000482320.1|TNPO3|ENSG00000064419.9|transportin 3 	ENST00000393245.1|TNPO3|ENSG00000064419.9|transportin 3 	ENST00000471234.1|TNPO3|ENSG00000064419.9|transportin 3
hg19_v2_chr15_+_85923856_85923987	0.0140227	GAGAUGA	ENST00000560302.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000394518.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000361243.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000560256.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr5_+_54455946_54456019	0.013756	GAGAUGA	ENST00000503787.1|GPX8|ENSG00000164294.9|glutathione peroxidase 8 (putative) 	ENST00000296734.6|GPX8|ENSG00000164294.9|glutathione peroxidase 8 (putative) 	ENST00000515370.1|GPX8|ENSG00000164294.9|glutathione peroxidase 8 (putative)
hg19_v2_chr2_-_73053126_73053184	0.01368	GAGAUGA	ENST00000272427.6|EXOC6B|ENSG00000144036.10|exocyst complex component 6B 	ENST00000410104.1|EXOC6B|ENSG00000144036.10|exocyst complex component 6B
hg19_v2_chr12_-_53625958_53626036	0.0130332	GAGAUGA	ENST00000327550.3|RARG|ENSG00000172819.12|retinoic acid receptor, gamma 	ENST00000546717.1|RARG|ENSG00000172819.12|retinoic acid receptor, gamma 	ENST00000425354.2|RARG|ENSG00000172819.12|retinoic acid receptor, gamma 	ENST00000394426.1|RARG|ENSG00000172819.12|retinoic acid receptor, gamma
hg19_v2_chr12_-_42538657_42538720	0.0128425	GAGAUGA	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr5_+_141303373_141303421	0.0121615	GAGAUGA	ENST00000432126.2|KIAA0141|ENSG00000081791.4|KIAA0141 	ENST00000194118.4|KIAA0141|ENSG00000081791.4|KIAA0141
hg19_v2_chr9_-_74525658_74525658	0.0114315	GAGAUGA	ENST00000333421.6|ABHD17B|ENSG00000107362.9|abhydrolase domain containing 17B
hg19_v2_chr21_-_46238034_46238051	0.0104907	GAGAUGA	ENST00000332859.6|SUMO3|ENSG00000184900.11|small ubiquitin-like modifier 3
hg19_v2_chr11_+_57520715_57520776	0.0101195	GAGAUGA	ENST00000524630.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000529919.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000399039.4|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000533189.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1
hg19_v2_chr10_+_88516396_88516426	0.00950255	GAGAUGA	ENST00000372037.3|BMPR1A|ENSG00000107779.7|bone morphogenetic protein receptor, type IA
hg19_v2_chr2_+_120517174_120517207	0.00912407	GAGAUGA	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr1_-_154155595_154155673	0.00832919	GAGAUGA	ENST00000328159.4|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000368531.2|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000323144.7|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000368533.3|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000341372.3|TPM3|ENSG00000143549.15|tropomyosin 3
hg19_v2_chr1_+_36348790_36348822	0.00787274	GAGAUGA	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chrX_+_69664706_69664819	0.00687354	GAGAUGA	ENST00000194900.4|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila) 	ENST00000374360.3|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila)
hg19_v2_chr2_-_164592497_164592573	0.00647838	GAGAUGA	ENST00000333129.3|FIGN|ENSG00000182263.9|fidgetin 	ENST00000409634.1|FIGN|ENSG00000182263.9|fidgetin
hg19_v2_chr6_+_114178512_114178586	0.00581565	GAGAUGA	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr13_-_33002151_33002273	0.00519601	GAGAUGA	ENST00000495479.1|N4BP2L1|ENSG00000139597.12|NEDD4 binding protein 2-like 1 	ENST00000343281.4|N4BP2L1|ENSG00000139597.12|NEDD4 binding protein 2-like 1 	ENST00000464470.1|N4BP2L1|ENSG00000139597.12|NEDD4 binding protein 2-like 1 	ENST00000380139.4|N4BP2L1|ENSG00000139597.12|NEDD4 binding protein 2-like 1 	ENST00000380133.2|N4BP2L1|ENSG00000139597.12|NEDD4 binding protein 2-like 1
hg19_v2_chr18_-_54305658_54305876	0.00457762	GAGAUGA	ENST00000586262.1|TXNL1|ENSG00000091164.8|thioredoxin-like 1 	ENST00000217515.6|TXNL1|ENSG00000091164.8|thioredoxin-like 1
hg19_v2_chr2_-_9563319_9563379	0.00448892	GAGAUGA	ENST00000497105.1|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1 	ENST00000360635.3|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1 	ENST00000359712.3|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1
hg19_v2_chr17_-_29151794_29151803	0.004478	GAGAUGA	ENST00000324238.6|CRLF3|ENSG00000176390.10|cytokine receptor-like factor 3
hg19_v2_chr2_+_233562015_233562062	0.00414299	GAGAUGA	ENST00000427233.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000373566.3|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000373563.4|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000428883.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000456491.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409480.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000421433.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000425040.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000430720.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409547.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000423659.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409196.3|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409451.3|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000429187.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000440945.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2
hg19_v2_chr16_+_70148230_70148275	0.00386356	GAGAUGA	ENST00000398122.3|PDPR|ENSG00000090857.9|pyruvate dehydrogenase phosphatase regulatory subunit 	ENST00000568530.1|PDPR|ENSG00000090857.9|pyruvate dehydrogenase phosphatase regulatory subunit
hg19_v2_chr6_+_132129151_132129166	0.00363077	GAGAUGA	ENST00000360971.2|ENPP1|ENSG00000197594.7|ectonucleotide pyrophosphatase/phosphodiesterase 1
hg19_v2_chr9_+_90112741_90112761	0.00302752	GAGAUGA	ENST00000469640.2|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr16_+_66400533_66400545	0.00214213	GAGAUGA	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr18_-_60987220_60987386	0.0017647	GAGAUGA	ENST00000398117.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr2_-_10952922_10952970	0.00136676	GAGAUGA	ENST00000272227.3|PDIA6|ENSG00000143870.8|protein disulfide isomerase family A, member 6
hg19_v2_chr1_-_33338076_33338105	0.00133943	GAGAUGA	ENST00000496770.1|FNDC5|ENSG00000160097.11|fibronectin type III domain containing 5
hg19_v2_chr17_-_61920280_61920425	0.000834427	GAGAUGA	ENST00000448276.2|SMARCD2|ENSG00000108604.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 	ENST00000577990.1|SMARCD2|ENSG00000108604.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
