hg19_v2_chr1_+_59486129_59486271	0.585976	FOXA2_FOXJ3	ENST00000438195.1|RP4-794H19.4|ENSG00000230812.1|RP4-794H19.4	ENST00000424308.1|RP4-794H19.4|ENSG00000230812.1|RP4-794H19.4
hg19_v2_chr14_+_74551650_74551680	0.383012	FOXA2_FOXJ3	ENST00000554938.1|LIN52|ENSG00000205659.6|lin-52 homolog (C. elegans)
hg19_v2_chr3_-_129375556_129375570	0.36029	FOXA2_FOXJ3	ENST00000510323.1|TMCC1|ENSG00000172765.12|transmembrane and coiled-coil domain family 1
hg19_v2_chr3_+_119316721_119316739	0.342931	FOXA2_FOXJ3	ENST00000488919.1|PLA1A|ENSG00000144837.4|phospholipase A1 member A 	ENST00000495992.1|PLA1A|ENSG00000144837.4|phospholipase A1 member A
hg19_v2_chr15_+_69857515_69857531	0.334013	FOXA2_FOXJ3	ENST00000559477.1|RP11-279F6.1|ENSG00000245750.3|RP11-279F6.1
hg19_v2_chr10_-_101825151_101825200	0.306673	FOXA2_FOXJ3	ENST00000441382.1|CPN1|ENSG00000120054.7|carboxypeptidase N, polypeptide 1
hg19_v2_chr5_-_159846066_159846095	0.28433	FOXA2_FOXJ3	ENST00000519349.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae) 	ENST00000520664.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr8_-_101321584_101321754	0.280625	FOXA2_FOXJ3	ENST00000523167.1|RNF19A|ENSG00000034677.7|ring finger protein 19A, RBR E3 ubiquitin protein ligase
hg19_v2_chr3_+_119316689_119316710	0.274291	FOXA2_FOXJ3	ENST00000273371.4|PLA1A|ENSG00000144837.4|phospholipase A1 member A
hg19_v2_chr1_+_241695670_241695705	0.265345	FOXA2_FOXJ3	ENST00000366557.4|KMO|ENSG00000117009.7|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
hg19_v2_chr1_+_59486059_59486113	0.260003	FOXA2_FOXJ3	ENST00000447329.1|RP4-794H19.4|ENSG00000230812.1|RP4-794H19.4
hg19_v2_chr1_+_81106951_81107001	0.254378	FOXA2_FOXJ3	ENST00000443565.1|RP5-887A10.1|ENSG00000234184.1|RP5-887A10.1
hg19_v2_chr19_-_13900972_13900972	0.251762	FOXA2_FOXJ3	ENST00000397557.1|AC008686.1|ENSG00000214109.3|Uncharacterized protein
hg19_v2_chr2_-_128615517_128615523	0.220761	FOXA2_FOXJ3	ENST00000409698.1|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v2_chr17_-_64216748_64216865	0.213427	FOXA2_FOXJ3	ENST00000585162.1|APOH|ENSG00000091583.6|apolipoprotein H (beta-2-glycoprotein I)
hg19_v2_chr8_+_67344710_67344750	0.207453	FOXA2_FOXJ3	ENST00000379385.4|ADHFE1|ENSG00000147576.11|alcohol dehydrogenase, iron containing, 1 	ENST00000396623.3|ADHFE1|ENSG00000147576.11|alcohol dehydrogenase, iron containing, 1 	ENST00000415254.1|ADHFE1|ENSG00000147576.11|alcohol dehydrogenase, iron containing, 1
hg19_v2_chr4_+_165675197_165675216	0.196119	FOXA2_FOXJ3	ENST00000515485.1|RP11-294O2.2|ENSG00000248771.1|RP11-294O2.2
hg19_v2_chr1_-_207095324_207095357	0.195985	FOXA2_FOXJ3	ENST00000530505.1|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000367091.3|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000442471.2|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3
hg19_v2_chr2_-_128615681_128615737	0.191689	FOXA2_FOXJ3	ENST00000409955.1|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D 	ENST00000272645.4|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v2_chr12_-_68696652_68696661	0.188847	FOXA2_FOXJ3	ENST00000539972.1|MDM1|ENSG00000111554.10|Mdm1 nuclear protein homolog (mouse)
hg19_v2_chr1_+_161035655_161035655	0.187108	FOXA2_FOXJ3	ENST00000600454.1|AL591806.1|ENSG00000268154.1|Uncharacterized protein
hg19_v2_chr5_+_137673200_137673271	0.181157	FOXA2_FOXJ3	ENST00000434981.2|FAM53C|ENSG00000120709.6|family with sequence similarity 53, member C
hg19_v2_chr15_-_55657428_55657474	0.177351	FOXA2_FOXJ3	ENST00000568543.1|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr3_-_187455680_187455732	0.170851	FOXA2_FOXJ3	ENST00000438077.1|BCL6|ENSG00000113916.13|B-cell CLL/lymphoma 6
hg19_v2_chr14_-_74551096_74551171	0.168973	FOXA2_FOXJ3	ENST00000350259.4|ALDH6A1|ENSG00000119711.8|aldehyde dehydrogenase 6 family, member A1
hg19_v2_chr5_-_10308125_10308142	0.166448	FOXA2_FOXJ3	ENST00000296658.3|CMBL|ENSG00000164237.4|carboxymethylenebutenolidase homolog (Pseudomonas)
hg19_v2_chr4_+_103790462_103790537	0.165571	FOXA2_FOXJ3	ENST00000503643.1|CISD2|ENSG00000145354.5|CDGSH iron sulfur domain 2
hg19_v2_chr12_+_49297899_49297955	0.161736	FOXA2_FOXJ3	ENST00000552942.1|CCDC65|ENSG00000139537.6|coiled-coil domain containing 65 	ENST00000320516.4|CCDC65|ENSG00000139537.6|coiled-coil domain containing 65
hg19_v2_chr1_+_220960033_220960101	0.160345	FOXA2_FOXJ3	ENST00000366910.5|MARC1|ENSG00000186205.8|mitochondrial amidoxime reducing component 1
hg19_v2_chr9_-_116837249_116837318	0.159487	FOXA2_FOXJ3	ENST00000466610.2|AMBP|ENSG00000106927.7|alpha-1-microglobulin/bikunin precursor
hg19_v2_chr1_+_221054411_221054411	0.157599	FOXA2_FOXJ3	ENST00000427693.1|HLX|ENSG00000136630.11|H2.0-like homeobox
hg19_v2_chrX_-_106959631_106959775	0.157057	FOXA2_FOXJ3	ENST00000486554.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372390.4|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr7_-_72972319_72972347	0.15598	FOXA2_FOXJ3	ENST00000223368.2|BCL7B|ENSG00000106635.3|B-cell CLL/lymphoma 7B
hg19_v2_chr14_-_74551172_74551196	0.155913	FOXA2_FOXJ3	ENST00000553458.1|ALDH6A1|ENSG00000119711.8|aldehyde dehydrogenase 6 family, member A1
hg19_v2_chr16_+_22517166_22517166	0.152746	FOXA2_FOXJ3	ENST00000356156.3|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr16_+_10479906_10479925	0.152199	FOXA2_FOXJ3	ENST00000562527.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000396560.2|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000396559.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000562102.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000543967.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000569939.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000569900.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2
hg19_v2_chr12_-_76462713_76462773	0.151656	FOXA2_FOXJ3	ENST00000552056.1|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr7_-_37026108_37026145	0.15009	FOXA2_FOXJ3	ENST00000396045.3|ELMO1|ENSG00000155849.11|engulfment and cell motility 1
hg19_v2_chr1_-_169555779_169555826	0.145337	FOXA2_FOXJ3	ENST00000367797.3|F5|ENSG00000198734.6|coagulation factor V (proaccelerin, labile factor) 	ENST00000367796.3|F5|ENSG00000198734.6|coagulation factor V (proaccelerin, labile factor)
hg19_v2_chr12_-_102591604_102591623	0.144893	FOXA2_FOXJ3	ENST00000329406.4|PMCH|ENSG00000183395.4|pro-melanin-concentrating hormone
hg19_v2_chr14_+_97263641_97263764	0.144328	FOXA2_FOXJ3	ENST00000216639.3|VRK1|ENSG00000100749.3|vaccinia related kinase 1
hg19_v2_chr1_-_151345159_151345209	0.141375	FOXA2_FOXJ3	ENST00000458566.1|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000447402.3|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000426705.2|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000435071.1|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000368868.5|SELENBP1|ENSG00000143416.16|selenium binding protein 1
hg19_v2_chr9_-_39288092_39288300	0.139257	FOXA2_FOXJ3	ENST00000323947.7|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3 	ENST00000297668.6|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3 	ENST00000377656.2|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3 	ENST00000377659.1|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3
hg19_v2_chr2_+_191513959_191514047	0.139005	FOXA2_FOXJ3	ENST00000337386.5|NAB1|ENSG00000138386.12|NGFI-A binding protein 1 (EGR1 binding protein 1) 	ENST00000357215.5|NAB1|ENSG00000138386.12|NGFI-A binding protein 1 (EGR1 binding protein 1)
hg19_v2_chr10_+_62538089_62538244	0.136691	FOXA2_FOXJ3	ENST00000519078.2|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1 	ENST00000395284.3|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1 	ENST00000316629.4|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1
hg19_v2_chr7_-_16840820_16841011	0.133168	FOXA2_FOXJ3	ENST00000450569.1|AGR2|ENSG00000106541.7|anterior gradient 2
hg19_v2_chr3_+_69928256_69928385	0.131786	FOXA2_FOXJ3	ENST00000394355.2|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr12_+_20968608_20968673	0.131331	FOXA2_FOXJ3	ENST00000381541.3|LST3|ENSG00000257046.1|Putative solute carrier organic anion transporter family member 1B7; Uncharacterized protein  	ENST00000540229.1|LST3|ENSG00000257046.1|Putative solute carrier organic anion transporter family member 1B7; Uncharacterized protein  	ENST00000553473.1|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3 	ENST00000554957.1|SLCO1B7|ENSG00000205754.6|solute carrier organic anion transporter family, member 1B7 (non-functional)
hg19_v2_chr14_+_38065052_38065052	0.130948	FOXA2_FOXJ3	ENST00000556845.1|TTC6|ENSG00000139865.12|tetratricopeptide repeat domain 6
hg19_v2_chr10_-_99094458_99094500	0.129332	FOXA2_FOXJ3	ENST00000371019.2|FRAT2|ENSG00000181274.5|frequently rearranged in advanced T-cell lymphomas 2
hg19_v2_chr22_-_39268308_39268319	0.128148	FOXA2_FOXJ3	ENST00000407418.3|CBX6|ENSG00000183741.7|chromobox homolog 6
hg19_v2_chr19_-_9546177_9546224	0.128067	FOXA2_FOXJ3	ENST00000592292.1|ZNF266|ENSG00000174652.13|zinc finger protein 266 	ENST00000588221.1|ZNF266|ENSG00000174652.13|zinc finger protein 266
hg19_v2_chr4_-_174256276_174256303	0.126625	FOXA2_FOXJ3	ENST00000296503.5|HMGB2|ENSG00000164104.7|high mobility group box 2
hg19_v2_chr4_+_147096837_147096912	0.126108	FOXA2_FOXJ3	ENST00000296581.5|LSM6|ENSG00000164167.5|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000502781.1|LSM6|ENSG00000164167.5|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr1_+_26036093_26036093	0.125942	FOXA2_FOXJ3	ENST00000374329.1|MAN1C1|ENSG00000117643.10|mannosidase, alpha, class 1C, member 1
hg19_v2_chr5_+_137673945_137673961	0.122156	FOXA2_FOXJ3	ENST00000513056.1|FAM53C|ENSG00000120709.6|family with sequence similarity 53, member C 	ENST00000511276.1|FAM53C|ENSG00000120709.6|family with sequence similarity 53, member C
hg19_v2_chr3_-_182703688_182703741	0.116854	FOXA2_FOXJ3	ENST00000466812.1|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1 	ENST00000487822.1|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1 	ENST00000460412.1|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1 	ENST00000469954.1|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr12_-_15374343_15374416	0.116833	FOXA2_FOXJ3	ENST00000256953.2|RERG|ENSG00000134533.2|RAS-like, estrogen-regulated, growth inhibitor 	ENST00000546331.1|RERG|ENSG00000134533.2|RAS-like, estrogen-regulated, growth inhibitor
hg19_v2_chr4_+_172734548_172734654	0.115117	FOXA2_FOXJ3	ENST00000506823.1|GALNTL6|ENSG00000174473.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
hg19_v2_chr14_-_75518129_75518235	0.113703	FOXA2_FOXJ3	ENST00000556257.1|MLH3|ENSG00000119684.11|mutL homolog 3 	ENST00000557648.1|MLH3|ENSG00000119684.11|mutL homolog 3 	ENST00000553263.1|MLH3|ENSG00000119684.11|mutL homolog 3 	ENST00000355774.2|MLH3|ENSG00000119684.11|mutL homolog 3 	ENST00000380968.2|MLH3|ENSG00000119684.11|mutL homolog 3 	ENST00000238662.7|MLH3|ENSG00000119684.11|mutL homolog 3
hg19_v2_chr9_-_86432547_86432699	0.113171	FOXA2_FOXJ3	ENST00000376365.3|GKAP1|ENSG00000165113.8|G kinase anchoring protein 1 	ENST00000376371.2|GKAP1|ENSG00000165113.8|G kinase anchoring protein 1
hg19_v2_chr17_-_57229155_57229198	0.111227	FOXA2_FOXJ3	ENST00000584089.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr10_-_103578182_103578222	0.108705	FOXA2_FOXJ3	ENST00000439817.1|MGEA5|ENSG00000198408.9|meningioma expressed antigen 5 (hyaluronidase)
hg19_v2_chr5_+_162932554_162932661	0.108254	FOXA2_FOXJ3	ENST00000321757.6|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta 	ENST00000421814.2|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta 	ENST00000518095.1|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta
hg19_v2_chr3_+_101292939_101293063	0.107451	FOXA2_FOXJ3	ENST00000265260.3|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000469941.1|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000296024.5|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein
hg19_v2_chr6_+_101846664_101846702	0.104781	FOXA2_FOXJ3	ENST00000421544.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000413795.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000369138.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000358361.3|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2
hg19_v2_chr6_-_122792919_122792970	0.104232	FOXA2_FOXJ3	ENST00000339697.4|SERINC1|ENSG00000111897.6|serine incorporator 1
hg19_v2_chr19_+_782755_782833	0.102781	FOXA2_FOXJ3	ENST00000606242.1|AC006273.5|ENSG00000267530.2|AC006273.5	ENST00000586061.1|AC006273.5|ENSG00000267530.2|AC006273.5
hg19_v2_chr1_-_114429997_114430077	0.102599	FOXA2_FOXJ3	ENST00000471267.1|BCL2L15|ENSG00000188761.7|BCL2-like 15 	ENST00000393320.3|BCL2L15|ENSG00000188761.7|BCL2-like 15
hg19_v2_chr19_-_52307357_52307368	0.100874	FOXA2_FOXJ3	ENST00000594900.1|FPR1|ENSG00000171051.4|formyl peptide receptor 1
hg19_v2_chr6_+_10528560_10528589	0.100649	FOXA2_FOXJ3	ENST00000379597.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr16_+_28858004_28858029	0.100627	FOXA2_FOXJ3	ENST00000322610.8|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1
hg19_v2_chr4_-_164534657_164534701	0.100174	FOXA2_FOXJ3	ENST00000339875.5|MARCH1|ENSG00000145416.9|membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase
hg19_v2_chr13_+_41885341_41885443	0.0992119	FOXA2_FOXJ3	ENST00000379406.3|NAA16|ENSG00000172766.14|N(alpha)-acetyltransferase 16, NatA auxiliary subunit 	ENST00000379367.3|NAA16|ENSG00000172766.14|N(alpha)-acetyltransferase 16, NatA auxiliary subunit 	ENST00000403412.3|NAA16|ENSG00000172766.14|N(alpha)-acetyltransferase 16, NatA auxiliary subunit
hg19_v2_chr14_+_50234827_50234886	0.0988807	FOXA2_FOXJ3	ENST00000554589.1|KLHDC2|ENSG00000165516.6|kelch domain containing 2 	ENST00000557247.1|KLHDC2|ENSG00000165516.6|kelch domain containing 2
hg19_v2_chr17_+_71229346_71229365	0.0986533	FOXA2_FOXJ3	ENST00000535032.2|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80 	ENST00000582793.1|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80
hg19_v2_chr6_+_123110465_123110480	0.0947736	FOXA2_FOXJ3	ENST00000539041.1|SMPDL3A|ENSG00000172594.8|sphingomyelin phosphodiesterase, acid-like 3A
hg19_v2_chrX_+_9431324_9431371	0.0946511	FOXA2_FOXJ3	ENST00000407597.2|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000424279.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000536365.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000441088.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000380961.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000415293.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr10_-_103578162_103578175	0.0944077	FOXA2_FOXJ3	ENST00000361464.3|MGEA5|ENSG00000198408.9|meningioma expressed antigen 5 (hyaluronidase) 	ENST00000357797.5|MGEA5|ENSG00000198408.9|meningioma expressed antigen 5 (hyaluronidase) 	ENST00000370094.3|MGEA5|ENSG00000198408.9|meningioma expressed antigen 5 (hyaluronidase)
hg19_v2_chr2_+_65283506_65283527	0.0940201	FOXA2_FOXJ3	ENST00000377990.2|CEP68|ENSG00000011523.9|centrosomal protein 68kDa
hg19_v2_chr7_+_6617039_6617136	0.0913389	FOXA2_FOXJ3	ENST00000405731.3|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396713.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396707.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000335965.6|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396709.1|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000483589.1|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396706.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4
hg19_v2_chr1_-_241799232_241799232	0.0912139	FOXA2_FOXJ3	ENST00000366553.1|CHML|ENSG00000203668.1|choroideremia-like (Rab escort protein 2)
hg19_v2_chr12_+_48516463_48516503	0.090881	FOXA2_FOXJ3	ENST00000546465.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle
hg19_v2_chr6_-_711395_711411	0.0905154	FOXA2_FOXJ3	ENST00000606285.1|RP11-532F6.3|ENSG00000272463.1|RP11-532F6.3
hg19_v2_chr1_+_81001398_81001440	0.0899548	FOXA2_FOXJ3	ENST00000418041.1|RP5-887A10.1|ENSG00000234184.1|RP5-887A10.1	ENST00000443104.1|RP5-887A10.1|ENSG00000234184.1|RP5-887A10.1
hg19_v2_chr8_+_27631903_27632045	0.0899312	FOXA2_FOXJ3	ENST00000305188.8|ESCO2|ENSG00000171320.10|establishment of sister chromatid cohesion N-acetyltransferase 2
hg19_v2_chr6_-_109330702_109330763	0.0882646	FOXA2_FOXJ3	ENST00000356644.7|SESN1|ENSG00000080546.9|sestrin 1
hg19_v2_chrX_-_41449204_41449229	0.088139	FOXA2_FOXJ3	ENST00000378179.3|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr14_-_102605983_102606042	0.0870388	FOXA2_FOXJ3	ENST00000334701.7|HSP90AA1|ENSG00000080824.14|heat shock protein 90kDa alpha (cytosolic), class A member 1
hg19_v2_chr3_+_164924716_164924750	0.0852991	FOXA2_FOXJ3	ENST00000470138.1|RP11-85M11.2|ENSG00000244128.1|RP11-85M11.2	ENST00000498616.1|RP11-85M11.2|ENSG00000244128.1|RP11-85M11.2
hg19_v2_chr18_-_25616519_25616549	0.085036	FOXA2_FOXJ3	ENST00000399380.3|CDH2|ENSG00000170558.4|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v2_chr18_+_13382553_13382573	0.0848023	FOXA2_FOXJ3	ENST00000586222.1|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr15_-_31283798_31283851	0.0844082	FOXA2_FOXJ3	ENST00000435680.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10 	ENST00000425768.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10
hg19_v2_chr14_+_104177607_104177607	0.0832244	FOXA2_FOXJ3	ENST00000429169.1|AL049840.1|ENSG00000224997.1|Uncharacterized protein; cDNA FLJ53535
hg19_v2_chr5_+_95998714_95998744	0.0830229	FOXA2_FOXJ3	ENST00000506811.1|CAST|ENSG00000153113.19|calpastatin 	ENST00000514055.1|CAST|ENSG00000153113.19|calpastatin
hg19_v2_chr14_+_88851874_88852056	0.0829569	FOXA2_FOXJ3	ENST00000393545.4|SPATA7|ENSG00000042317.12|spermatogenesis associated 7 	ENST00000356583.5|SPATA7|ENSG00000042317.12|spermatogenesis associated 7 	ENST00000555401.1|SPATA7|ENSG00000042317.12|spermatogenesis associated 7 	ENST00000553885.1|SPATA7|ENSG00000042317.12|spermatogenesis associated 7
hg19_v2_chr15_+_35270552_35270552	0.0829	FOXA2_FOXJ3	ENST00000391457.2|AC114546.1|ENSG00000212768.2|HCG37415; PRO1914; Uncharacterized protein
hg19_v2_chr3_-_127455200_127455223	0.0824836	FOXA2_FOXJ3	ENST00000398101.3|MGLL|ENSG00000074416.9|monoglyceride lipase
hg19_v2_chr5_+_176853702_176853855	0.0818213	FOXA2_FOXJ3	ENST00000507633.1|GRK6|ENSG00000198055.6|G protein-coupled receptor kinase 6 	ENST00000393576.3|GRK6|ENSG00000198055.6|G protein-coupled receptor kinase 6 	ENST00000355958.5|GRK6|ENSG00000198055.6|G protein-coupled receptor kinase 6 	ENST00000528793.1|GRK6|ENSG00000198055.6|G protein-coupled receptor kinase 6 	ENST00000512684.1|GRK6|ENSG00000198055.6|G protein-coupled receptor kinase 6
hg19_v2_chr1_+_246729724_246729794	0.0809912	FOXA2_FOXJ3	ENST00000366513.4|CNST|ENSG00000162852.9|consortin, connexin sorting protein 	ENST00000366512.3|CNST|ENSG00000162852.9|consortin, connexin sorting protein
hg19_v2_chr2_+_58655520_58655570	0.0808568	FOXA2_FOXJ3	ENST00000455219.3|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122 	ENST00000449448.2|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122
hg19_v2_chr3_+_148447887_148447911	0.0802805	FOXA2_FOXJ3	ENST00000475347.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1 	ENST00000474935.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1 	ENST00000461609.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1
hg19_v2_chr19_-_48613820_48613886	0.0797526	FOXA2_FOXJ3	ENST00000596352.1|PLA2G4C|ENSG00000105499.9|phospholipase A2, group IVC (cytosolic, calcium-independent)
hg19_v2_chr12_+_57998400_57998422	0.0795559	FOXA2_FOXJ3	ENST00000548804.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000550596.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000551835.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000549583.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila)
hg19_v2_chr12_-_71512027_71512027	0.0795179	FOXA2_FOXJ3	ENST00000549357.1|CTD-2021H9.3|ENSG00000258053.1|Uncharacterized protein
hg19_v2_chr6_+_108882069_108882087	0.0789987	FOXA2_FOXJ3	ENST00000406360.1|FOXO3|ENSG00000118689.10|forkhead box O3
hg19_v2_chr1_-_241803649_241803678	0.0787083	FOXA2_FOXJ3	ENST00000366554.2|OPN3|ENSG00000054277.8|opsin 3
hg19_v2_chr1_-_241803679_241803701	0.0779419	FOXA2_FOXJ3	ENST00000331838.5|OPN3|ENSG00000054277.8|opsin 3
hg19_v2_chr4_-_15683230_15683248	0.0776337	FOXA2_FOXJ3	ENST00000515679.1|FBXL5|ENSG00000118564.10|F-box and leucine-rich repeat protein 5
hg19_v2_chr10_+_94352956_94353043	0.0772885	FOXA2_FOXJ3	ENST00000260731.3|KIF11|ENSG00000138160.4|kinesin family member 11
hg19_v2_chr17_-_30185946_30185970	0.0765011	FOXA2_FOXJ3	ENST00000579741.1|COPRS|ENSG00000172301.6|coordinator of PRMT5, differentiation stimulator
hg19_v2_chr1_+_227127981_227128012	0.0760875	FOXA2_FOXJ3	ENST00000366778.1|ADCK3|ENSG00000163050.12|aarF domain containing kinase 3 	ENST00000366777.3|ADCK3|ENSG00000163050.12|aarF domain containing kinase 3 	ENST00000458507.2|ADCK3|ENSG00000163050.12|aarF domain containing kinase 3
hg19_v2_chr4_+_165675269_165675289	0.0756377	FOXA2_FOXJ3	ENST00000507311.1|RP11-294O2.2|ENSG00000248771.1|RP11-294O2.2
hg19_v2_chr2_+_109204909_109204928	0.0744218	FOXA2_FOXJ3	ENST00000393310.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr1_+_24645865_24645881	0.0743132	FOXA2_FOXJ3	ENST00000342072.4|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr12_-_49582978_49583107	0.0742552	FOXA2_FOXJ3	ENST00000301071.7|TUBA1A|ENSG00000167552.9|tubulin, alpha 1a
hg19_v2_chr1_+_78470530_78470551	0.074243	FOXA2_FOXJ3	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr7_+_12250943_12251012	0.0741858	FOXA2_FOXJ3	ENST00000442107.1|TMEM106B|ENSG00000106460.14|transmembrane protein 106B
hg19_v2_chr10_-_75168071_75168165	0.0739405	FOXA2_FOXJ3	ENST00000394847.3|ANXA7|ENSG00000138279.11|annexin A7
hg19_v2_chr6_-_131949200_131949299	0.0738721	FOXA2_FOXJ3	ENST00000539158.1|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000368058.1|MED23|ENSG00000112282.13|mediator complex subunit 23
hg19_v2_chr2_-_3521518_3521518	0.0737024	FOXA2_FOXJ3	ENST00000382093.5|ADI1|ENSG00000182551.9|acireductone dioxygenase 1
hg19_v2_chr12_-_92536433_92536459	0.0730929	FOXA2_FOXJ3	ENST00000551563.2|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000546975.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000549802.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79
hg19_v2_chr12_-_122107549_122107572	0.0723952	FOXA2_FOXJ3	ENST00000355329.3|MORN3|ENSG00000139714.8|MORN repeat containing 3
hg19_v2_chr10_+_96698406_96698428	0.0717648	FOXA2_FOXJ3	ENST00000260682.6|CYP2C9|ENSG00000138109.9|cytochrome P450, family 2, subfamily C, polypeptide 9
hg19_v2_chr12_+_54378923_54378970	0.0712031	FOXA2_FOXJ3	ENST00000303460.4|HOXC10|ENSG00000180818.4|homeobox C10
hg19_v2_chr1_+_24646002_24646056	0.0708251	FOXA2_FOXJ3	ENST00000356046.2|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr11_+_34643600_34643750	0.0705104	FOXA2_FOXJ3	ENST00000530286.1|EHF|ENSG00000135373.8|ets homologous factor 	ENST00000533754.1|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr14_+_32547434_32547446	0.0703968	FOXA2_FOXJ3	ENST00000556191.1|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5 	ENST00000554090.1|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5
hg19_v2_chr1_+_24645807_24645819	0.0693668	FOXA2_FOXJ3	ENST00000361548.4|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr6_-_42185583_42185618	0.0689884	FOXA2_FOXJ3	ENST00000053468.3|MRPS10|ENSG00000048544.5|mitochondrial ribosomal protein S10
hg19_v2_chr1_+_95616933_95616933	0.0683959	FOXA2_FOXJ3	ENST00000604203.1|RP11-57H12.6|ENSG00000271092.1|TMEM56-RWDD3 readthrough
hg19_v2_chr6_-_131211534_131211564	0.0666272	FOXA2_FOXJ3	ENST00000456097.2|EPB41L2|ENSG00000079819.12|erythrocyte membrane protein band 4.1-like 2
hg19_v2_chr12_+_2986359_2986421	0.0666219	FOXA2_FOXJ3	ENST00000538636.1|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000461997.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000489288.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000366285.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000538700.1|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1
hg19_v2_chr2_-_175260368_175260450	0.066537	FOXA2_FOXJ3	ENST00000342016.3|CIR1|ENSG00000138433.11|corepressor interacting with RBPJ, 1 	ENST00000362053.5|CIR1|ENSG00000138433.11|corepressor interacting with RBPJ, 1
hg19_v2_chr1_+_86064794_86064814	0.0663695	FOXA2_FOXJ3	ENST00000426794.1|RP11-290M5.2|ENSG00000230285.1|RP11-290M5.2
hg19_v2_chr10_+_111985713_111985774	0.0661122	FOXA2_FOXJ3	ENST00000239007.7|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr1_+_196621002_196621021	0.0657322	FOXA2_FOXJ3	ENST00000367429.4|CFH|ENSG00000000971.11|complement factor H 	ENST00000439155.2|CFH|ENSG00000000971.11|complement factor H
hg19_v2_chr12_-_7596735_7596781	0.0651618	FOXA2_FOXJ3	ENST00000416109.2|CD163L1|ENSG00000177675.4|CD163 molecule-like 1 	ENST00000396630.1|CD163L1|ENSG00000177675.4|CD163 molecule-like 1 	ENST00000313599.3|CD163L1|ENSG00000177675.4|CD163 molecule-like 1
hg19_v2_chr6_-_100016527_100016589	0.0649706	FOXA2_FOXJ3	ENST00000523985.1|CCNC|ENSG00000112237.8|cyclin C 	ENST00000518714.1|CCNC|ENSG00000112237.8|cyclin C 	ENST00000520371.1|CCNC|ENSG00000112237.8|cyclin C
hg19_v2_chr3_+_142315225_142315290	0.0645892	FOXA2_FOXJ3	ENST00000457734.2|PLS1|ENSG00000120756.8|plastin 1 	ENST00000483373.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000475296.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000495744.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000476044.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000461644.1|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr1_+_174670143_174670160	0.0645726	FOXA2_FOXJ3	ENST00000367687.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000347255.2|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr3_-_125655882_125655882	0.0643966	FOXA2_FOXJ3	ENST00000340333.3|ALG1L|ENSG00000189366.5|ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like
hg19_v2_chr8_+_27632047_27632080	0.0642488	FOXA2_FOXJ3	ENST00000397418.2|ESCO2|ENSG00000171320.10|establishment of sister chromatid cohesion N-acetyltransferase 2
hg19_v2_chr14_-_58893832_58893865	0.0642461	FOXA2_FOXJ3	ENST00000556007.2|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v2_chr3_+_119298523_119298644	0.0640556	FOXA2_FOXJ3	ENST00000357003.3|ADPRH|ENSG00000144843.7|ADP-ribosylarginine hydrolase
hg19_v2_chr1_-_24194771_24194851	0.063968	FOXA2_FOXJ3	ENST00000374479.3|FUCA1|ENSG00000179163.11|fucosidase, alpha-L- 1, tissue
hg19_v2_chr9_+_131903916_131903951	0.0633309	FOXA2_FOXJ3	ENST00000419582.1|PPP2R4|ENSG00000119383.15|protein phosphatase 2A activator, regulatory subunit 4
hg19_v2_chr15_-_54051831_54051904	0.0633012	FOXA2_FOXJ3	ENST00000557913.1|WDR72|ENSG00000166415.10|WD repeat domain 72 	ENST00000360509.5|WDR72|ENSG00000166415.10|WD repeat domain 72
hg19_v2_chr12_+_27175476_27175518	0.0629529	FOXA2_FOXJ3	ENST00000546323.1|MED21|ENSG00000152944.4|mediator complex subunit 21 	ENST00000282892.3|MED21|ENSG00000152944.4|mediator complex subunit 21
hg19_v2_chr21_-_43346790_43346823	0.0626289	FOXA2_FOXJ3	ENST00000329623.7|C2CD2|ENSG00000157617.12|C2 calcium-dependent domain containing 2
hg19_v2_chr19_+_16607122_16607274	0.0618661	FOXA2_FOXJ3	ENST00000221671.3|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44 	ENST00000594035.1|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44 	ENST00000599550.1|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44 	ENST00000594813.1|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44
hg19_v2_chr2_+_120770581_120770608	0.0617152	FOXA2_FOXJ3	ENST00000263713.5|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr16_+_66442411_66442461	0.0613119	FOXA2_FOXJ3	ENST00000499966.1|LINC00920|ENSG00000246898.1|long intergenic non-protein coding RNA 920
hg19_v2_chr3_-_15382875_15382889	0.060689	FOXA2_FOXJ3	ENST00000408919.3|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated)
hg19_v2_chr19_-_14992264_14992264	0.060391	FOXA2_FOXJ3	ENST00000327462.2|OR7A17|ENSG00000185385.2|olfactory receptor, family 7, subfamily A, member 17
hg19_v2_chr10_-_69597810_69597827	0.0603738	FOXA2_FOXJ3	ENST00000483798.2|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr2_+_65283529_65283599	0.0603371	FOXA2_FOXJ3	ENST00000546106.1|CEP68|ENSG00000011523.9|centrosomal protein 68kDa 	ENST00000537589.1|CEP68|ENSG00000011523.9|centrosomal protein 68kDa 	ENST00000260569.4|CEP68|ENSG00000011523.9|centrosomal protein 68kDa
hg19_v2_chr10_-_32217717_32217781	0.0602867	FOXA2_FOXJ3	ENST00000396144.4|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12 	ENST00000375245.4|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12 	ENST00000344936.2|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12 	ENST00000375250.5|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12
hg19_v2_chr7_+_12544025_12544073	0.0597215	FOXA2_FOXJ3	ENST00000443874.1|AC005281.1|ENSG00000226690.2|AC005281.1	ENST00000424453.1|AC005281.1|ENSG00000226690.2|AC005281.1
hg19_v2_chr5_+_79703823_79703845	0.0596203	FOXA2_FOXJ3	ENST00000338008.5|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16 	ENST00000510158.1|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16 	ENST00000505560.1|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16
hg19_v2_chr9_-_35812236_35812274	0.0595955	FOXA2_FOXJ3	ENST00000340291.2|SPAG8|ENSG00000137098.9|sperm associated antigen 8
hg19_v2_chr12_-_56367101_56367265	0.0592807	FOXA2_FOXJ3	ENST00000549233.2|PMEL|ENSG00000185664.10|premelanosome protein
hg19_v2_chr3_-_49066811_49066851	0.0584671	FOXA2_FOXJ3	ENST00000442157.1|IMPDH2|ENSG00000178035.7|IMP (inosine 5'-monophosphate) dehydrogenase 2 	ENST00000326739.4|IMPDH2|ENSG00000178035.7|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg19_v2_chr1_-_20126365_20126414	0.0575581	FOXA2_FOXJ3	ENST00000294543.6|TMCO4|ENSG00000162542.9|transmembrane and coiled-coil domains 4 	ENST00000375122.2|TMCO4|ENSG00000162542.9|transmembrane and coiled-coil domains 4
hg19_v2_chr9_-_136933615_136933682	0.0574465	FOXA2_FOXJ3	ENST00000371834.2|BRD3|ENSG00000169925.12|bromodomain containing 3
hg19_v2_chr1_-_40562908_40562931	0.0574049	FOXA2_FOXJ3	ENST00000527311.2|PPT1|ENSG00000131238.12|palmitoyl-protein thioesterase 1 	ENST00000449045.2|PPT1|ENSG00000131238.12|palmitoyl-protein thioesterase 1 	ENST00000372779.4|PPT1|ENSG00000131238.12|palmitoyl-protein thioesterase 1
hg19_v2_chr6_-_131949305_131949389	0.0564205	FOXA2_FOXJ3	ENST00000368053.4|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000354577.4|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000403834.3|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000540546.1|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000368068.3|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000368060.3|MED23|ENSG00000112282.13|mediator complex subunit 23
hg19_v2_chr6_-_159240415_159240444	0.0561783	FOXA2_FOXJ3	ENST00000367075.3|EZR|ENSG00000092820.13|ezrin
hg19_v2_chr2_+_54342574_54342641	0.0559651	FOXA2_FOXJ3	ENST00000303536.4|ACYP2|ENSG00000170634.8|acylphosphatase 2, muscle type 	ENST00000394666.3|ACYP2|ENSG00000170634.8|acylphosphatase 2, muscle type
hg19_v2_chr11_-_85780853_85780936	0.0557216	FOXA2_FOXJ3	ENST00000531930.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000528398.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein
hg19_v2_chr2_-_14541060_14541087	0.0552764	FOXA2_FOXJ3	ENST00000418420.1|LINC00276|ENSG00000230448.1|long intergenic non-protein coding RNA 276 	ENST00000417751.1|LINC00276|ENSG00000230448.1|long intergenic non-protein coding RNA 276
hg19_v2_chr16_+_53469525_53469598	0.055005	FOXA2_FOXJ3	ENST00000544405.2|RBL2|ENSG00000103479.10|retinoblastoma-like 2 (p130)
hg19_v2_chr4_+_79567057_79567159	0.0545092	FOXA2_FOXJ3	ENST00000503259.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094 	ENST00000507802.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094
hg19_v2_chr7_-_81635106_81635130	0.0542798	FOXA2_FOXJ3	ENST00000443883.1|CACNA2D1|ENSG00000153956.11|calcium channel, voltage-dependent, alpha 2/delta subunit 1
hg19_v2_chr17_-_26662440_26662463	0.0540611	FOXA2_FOXJ3	ENST00000578122.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr17_-_7531121_7531198	0.0538051	FOXA2_FOXJ3	ENST00000573566.1|SAT2|ENSG00000141504.7|spermidine/spermine N1-acetyltransferase family member 2 	ENST00000269298.5|SAT2|ENSG00000141504.7|spermidine/spermine N1-acetyltransferase family member 2
hg19_v2_chr3_-_156272924_156272973	0.0536873	FOXA2_FOXJ3	ENST00000467789.1|SSR3|ENSG00000114850.2|signal sequence receptor, gamma (translocon-associated protein gamma) 	ENST00000265044.2|SSR3|ENSG00000114850.2|signal sequence receptor, gamma (translocon-associated protein gamma)
hg19_v2_chr4_-_14889791_14889805	0.053674	FOXA2_FOXJ3	ENST00000509654.1|LINC00504|ENSG00000248360.3|long intergenic non-protein coding RNA 504 	ENST00000515031.1|LINC00504|ENSG00000248360.3|long intergenic non-protein coding RNA 504 	ENST00000505089.2|LINC00504|ENSG00000248360.3|long intergenic non-protein coding RNA 504
hg19_v2_chr9_-_21142144_21142144	0.05367	FOXA2_FOXJ3	ENST00000380229.2|IFNW1|ENSG00000177047.5|interferon, omega 1
hg19_v2_chr10_-_69597915_69597926	0.0535131	FOXA2_FOXJ3	ENST00000225171.2|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr20_-_45976816_45976860	0.0531979	FOXA2_FOXJ3	ENST00000441977.1|ZMYND8|ENSG00000101040.15|zinc finger, MYND-type containing 8
hg19_v2_chr11_+_844067_844158	0.0525933	FOXA2_FOXJ3	ENST00000397406.1|TSPAN4|ENSG00000214063.6|tetraspanin 4 	ENST00000409543.2|TSPAN4|ENSG00000214063.6|tetraspanin 4 	ENST00000525201.1|TSPAN4|ENSG00000214063.6|tetraspanin 4
hg19_v2_chr7_+_74191613_74191613	0.0524934	FOXA2_FOXJ3	ENST00000442021.2|NCF1|ENSG00000158517.9|neutrophil cytosolic factor 1
hg19_v2_chr19_+_36024310_36024329	0.051828	FOXA2_FOXJ3	ENST00000222286.4|GAPDHS|ENSG00000105679.4|glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
hg19_v2_chr3_-_154042205_154042229	0.051786	FOXA2_FOXJ3	ENST00000329463.5|DHX36|ENSG00000174953.9|DEAH (Asp-Glu-Ala-His) box polypeptide 36
hg19_v2_chr8_-_93978357_93978379	0.0513617	FOXA2_FOXJ3	ENST00000522925.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000522903.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000537541.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000518748.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000519069.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000521988.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr20_+_44035847_44035879	0.0511906	FOXA2_FOXJ3	ENST00000372712.2|DBNDD2|ENSG00000244274.3|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v2_chr2_+_74120094_74120142	0.0509839	FOXA2_FOXJ3	ENST00000409731.3|ACTG2|ENSG00000163017.9|actin, gamma 2, smooth muscle, enteric 	ENST00000345517.3|ACTG2|ENSG00000163017.9|actin, gamma 2, smooth muscle, enteric 	ENST00000409918.1|ACTG2|ENSG00000163017.9|actin, gamma 2, smooth muscle, enteric 	ENST00000442912.1|ACTG2|ENSG00000163017.9|actin, gamma 2, smooth muscle, enteric 	ENST00000409624.1|ACTG2|ENSG00000163017.9|actin, gamma 2, smooth muscle, enteric
hg19_v2_chr7_+_12250886_12250933	0.0506712	FOXA2_FOXJ3	ENST00000444443.1|TMEM106B|ENSG00000106460.14|transmembrane protein 106B 	ENST00000396667.3|TMEM106B|ENSG00000106460.14|transmembrane protein 106B
hg19_v2_chr1_+_203765437_203765437	0.0501429	FOXA2_FOXJ3	ENST00000550078.1|ZBED6|ENSG00000257315.1|zinc finger, BED-type containing 6
hg19_v2_chr6_+_161123270_161123278	0.0499959	FOXA2_FOXJ3	ENST00000366924.2|PLG|ENSG00000122194.14|plasminogen 	ENST00000308192.9|PLG|ENSG00000122194.14|plasminogen 	ENST00000418964.1|PLG|ENSG00000122194.14|plasminogen
hg19_v2_chr20_+_43990576_43990596	0.0496769	FOXA2_FOXJ3	ENST00000372727.1|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) 	ENST00000414310.1|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
hg19_v2_chr9_-_119162885_119162885	0.0495432	FOXA2_FOXJ3	ENST00000445861.2|PAPPA-AS1|ENSG00000256040.1|PAPPA antisense RNA 1
hg19_v2_chr1_+_145883868_145883868	0.0494013	FOXA2_FOXJ3	ENST00000447947.2|GPR89C|ENSG00000196644.8|G protein-coupled receptor 89C
hg19_v2_chr2_+_162165038_162165111	0.0492418	FOXA2_FOXJ3	ENST00000437630.1|PSMD14|ENSG00000115233.7|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
hg19_v2_chr1_+_203830703_203830743	0.0491933	FOXA2_FOXJ3	ENST00000414487.2|SNRPE|ENSG00000182004.8|small nuclear ribonucleoprotein polypeptide E
hg19_v2_chr9_+_80850952_80851267	0.0488528	FOXA2_FOXJ3	ENST00000424347.2|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000415759.2|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000376597.4|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000277082.5|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000376598.2|CEP78|ENSG00000148019.8|centrosomal protein 78kDa
hg19_v2_chrX_+_40440146_40440268	0.0486174	FOXA2_FOXJ3	ENST00000535539.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000378438.4|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000436783.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000544975.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000535777.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000447485.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000423649.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2
hg19_v2_chr14_-_58894223_58894261	0.0483455	FOXA2_FOXJ3	ENST00000555593.1|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v2_chr15_+_57998923_57998934	0.048321	FOXA2_FOXJ3	ENST00000380557.4|POLR2M|ENSG00000255529.3|polymerase (RNA) II (DNA directed) polypeptide M
hg19_v2_chr7_+_26332645_26332674	0.0482537	FOXA2_FOXJ3	ENST00000396376.1|SNX10|ENSG00000086300.11|sorting nexin 10
hg19_v2_chr3_+_132036207_132036218	0.047799	FOXA2_FOXJ3	ENST00000336375.5|ACPP|ENSG00000014257.11|acid phosphatase, prostate 	ENST00000495911.1|ACPP|ENSG00000014257.11|acid phosphatase, prostate
hg19_v2_chr2_-_26251481_26251481	0.0477681	FOXA2_FOXJ3	ENST00000599234.1|AC013449.1|ENSG00000268412.1|Uncharacterized protein
hg19_v2_chr16_-_80926457_80926494	0.0474433	FOXA2_FOXJ3	ENST00000563626.1|RP11-314O13.1|ENSG00000260896.1|RP11-314O13.1	ENST00000562231.1|RP11-314O13.1|ENSG00000260896.1|RP11-314O13.1
hg19_v2_chr1_-_160492994_160493057	0.0467457	FOXA2_FOXJ3	ENST00000368055.1|SLAMF6|ENSG00000162739.9|SLAM family member 6 	ENST00000368057.3|SLAMF6|ENSG00000162739.9|SLAM family member 6 	ENST00000368059.3|SLAMF6|ENSG00000162739.9|SLAM family member 6
hg19_v2_chr4_+_71017791_71017796	0.0467155	FOXA2_FOXJ3	ENST00000502294.1|C4orf40|ENSG00000187533.9|chromosome 4 open reading frame 40
hg19_v2_chr5_+_95998673_95998713	0.0466393	FOXA2_FOXJ3	ENST00000514845.1|CAST|ENSG00000153113.19|calpastatin
hg19_v2_chrX_+_120181457_120181474	0.0465399	FOXA2_FOXJ3	ENST00000328078.1|GLUD2|ENSG00000182890.3|glutamate dehydrogenase 2
hg19_v2_chr15_-_58571445_58571478	0.0458058	FOXA2_FOXJ3	ENST00000558231.1|ALDH1A2|ENSG00000128918.10|aldehyde dehydrogenase 1 family, member A2
hg19_v2_chr5_+_60933634_60933637	0.0456747	FOXA2_FOXJ3	ENST00000505642.1|C5orf64|ENSG00000178722.8|chromosome 5 open reading frame 64
hg19_v2_chr12_+_32832134_32832196	0.0456709	FOXA2_FOXJ3	ENST00000452533.2|DNM1L|ENSG00000087470.13|dynamin 1-like
hg19_v2_chr11_+_126173647_126173647	0.0456032	FOXA2_FOXJ3	ENST00000263579.4|DCPS|ENSG00000110063.4|decapping enzyme, scavenger
hg19_v2_chr1_+_24645915_24645973	0.0455961	FOXA2_FOXJ3	ENST00000350501.5|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr2_+_61372226_61372273	0.0454886	FOXA2_FOXJ3	ENST00000426997.1|C2orf74|ENSG00000237651.2|chromosome 2 open reading frame 74
hg19_v2_chr4_-_70080449_70080449	0.045373	FOXA2_FOXJ3	ENST00000446444.1|UGT2B11|ENSG00000213759.4|UDP glucuronosyltransferase 2 family, polypeptide B11
hg19_v2_chr11_-_47447970_47448029	0.0453709	FOXA2_FOXJ3	ENST00000298852.3|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000530912.1|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3
hg19_v2_chr20_+_33563206_33563206	0.0453201	FOXA2_FOXJ3	ENST00000262873.7|MYH7B|ENSG00000078814.11|myosin, heavy chain 7B, cardiac muscle, beta
hg19_v2_chr7_-_66460563_66460605	0.0452515	FOXA2_FOXJ3	ENST00000246868.2|SBDS|ENSG00000126524.5|Shwachman-Bodian-Diamond syndrome
hg19_v2_chr16_+_28857957_28857969	0.0450134	FOXA2_FOXJ3	ENST00000567536.1|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1
hg19_v2_chr14_+_56078695_56078784	0.0443912	FOXA2_FOXJ3	ENST00000416613.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr4_-_111120334_111120361	0.0435591	FOXA2_FOXJ3	ENST00000503885.1|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr16_-_28634874_28634907	0.0435411	FOXA2_FOXJ3	ENST00000395609.1|SULT1A1|ENSG00000196502.7|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 	ENST00000350842.4|SULT1A1|ENSG00000196502.7|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
hg19_v2_chr11_+_118398178_118398208	0.0433623	FOXA2_FOXJ3	ENST00000302783.4|TTC36|ENSG00000172425.6|tetratricopeptide repeat domain 36 	ENST00000539546.1|TTC36|ENSG00000172425.6|tetratricopeptide repeat domain 36
hg19_v2_chr14_-_58894332_58894380	0.0430231	FOXA2_FOXJ3	ENST00000395159.2|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v2_chr5_-_96209315_96209315	0.0428913	FOXA2_FOXJ3	ENST00000504056.1|CTD-2260A17.2|ENSG00000247121.2|Uncharacterized protein
hg19_v2_chr11_-_118272610_118272610	0.0427248	FOXA2_FOXJ3	ENST00000534438.1|RP11-770J1.5|ENSG00000254873.1|Uncharacterized protein
hg19_v2_chr16_+_84801852_84801877	0.0423421	FOXA2_FOXJ3	ENST00000569925.1|USP10|ENSG00000103194.11|ubiquitin specific peptidase 10 	ENST00000567526.1|USP10|ENSG00000103194.11|ubiquitin specific peptidase 10
hg19_v2_chr19_-_36523529_36523573	0.0422086	FOXA2_FOXJ3	ENST00000593074.1|CLIP3|ENSG00000105270.10|CAP-GLY domain containing linker protein 3
hg19_v2_chr1_-_16763685_16763685	0.0422067	FOXA2_FOXJ3	ENST00000540400.1|SPATA21|ENSG00000187144.7|spermatogenesis associated 21
hg19_v2_chr1_+_207943667_207943684	0.0421435	FOXA2_FOXJ3	ENST00000462968.2|CD46|ENSG00000117335.14|CD46 molecule, complement regulatory protein
hg19_v2_chr10_-_63995871_63996022	0.0417989	FOXA2_FOXJ3	ENST00000315289.2|RTKN2|ENSG00000182010.6|rhotekin 2
hg19_v2_chr2_+_109204743_109204855	0.0410882	FOXA2_FOXJ3	ENST00000332345.6|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr10_+_7745232_7745295	0.0410515	FOXA2_FOXJ3	ENST00000358415.4|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v2_chr9_+_139702363_139702413	0.0410431	FOXA2_FOXJ3	ENST00000371663.4|RABL6|ENSG00000196642.11|RAB, member RAS oncogene family-like 6 	ENST00000371671.4|RABL6|ENSG00000196642.11|RAB, member RAS oncogene family-like 6 	ENST00000311502.7|RABL6|ENSG00000196642.11|RAB, member RAS oncogene family-like 6
hg19_v2_chr15_+_84906338_84906338	0.0409978	FOXA2_FOXJ3	ENST00000512109.1|GOLGA6L4|ENSG00000184206.7|golgin A6 family-like 4
hg19_v2_chr22_-_29784519_29784576	0.040721	FOXA2_FOXJ3	ENST00000357586.2|AP1B1|ENSG00000100280.12|adaptor-related protein complex 1, beta 1 subunit 	ENST00000356015.2|AP1B1|ENSG00000100280.12|adaptor-related protein complex 1, beta 1 subunit 	ENST00000432560.2|AP1B1|ENSG00000100280.12|adaptor-related protein complex 1, beta 1 subunit 	ENST00000317368.7|AP1B1|ENSG00000100280.12|adaptor-related protein complex 1, beta 1 subunit
hg19_v2_chr15_+_78857849_78857869	0.0405103	FOXA2_FOXJ3	ENST00000299565.5|CHRNA5|ENSG00000169684.9|cholinergic receptor, nicotinic, alpha 5 (neuronal)
hg19_v2_chr15_+_71185148_71185214	0.0402726	FOXA2_FOXJ3	ENST00000443425.2|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49 	ENST00000560755.1|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49
hg19_v2_chr1_+_15764931_15764945	0.0402441	FOXA2_FOXJ3	ENST00000375949.4|CTRC|ENSG00000162438.7|chymotrypsin C (caldecrin) 	ENST00000375943.2|CTRC|ENSG00000162438.7|chymotrypsin C (caldecrin)
hg19_v2_chr8_-_100025238_100025272	0.0401824	FOXA2_FOXJ3	ENST00000521696.1|RP11-410L14.2|ENSG00000253948.1|RP11-410L14.2
hg19_v2_chr1_+_149858461_149858525	0.0401096	FOXA2_FOXJ3	ENST00000331380.2|HIST2H2AC|ENSG00000184260.4|histone cluster 2, H2ac
hg19_v2_chr3_-_154042235_154042290	0.0399636	FOXA2_FOXJ3	ENST00000308361.6|DHX36|ENSG00000174953.9|DEAH (Asp-Glu-Ala-His) box polypeptide 36 	ENST00000496811.1|DHX36|ENSG00000174953.9|DEAH (Asp-Glu-Ala-His) box polypeptide 36 	ENST00000544526.1|DHX36|ENSG00000174953.9|DEAH (Asp-Glu-Ala-His) box polypeptide 36
hg19_v2_chr1_+_161123536_161123588	0.0396462	FOXA2_FOXJ3	ENST00000368003.5|UFC1|ENSG00000143222.7|ubiquitin-fold modifier conjugating enzyme 1
hg19_v2_chr9_-_140142181_140142208	0.0395213	FOXA2_FOXJ3	ENST00000484720.1|FAM166A|ENSG00000188163.6|family with sequence similarity 166, member A
hg19_v2_chr1_+_150488205_150488251	0.0394367	FOXA2_FOXJ3	ENST00000416894.1|LINC00568|ENSG00000228126.1|long intergenic non-protein coding RNA 568
hg19_v2_chr18_-_52626622_52626739	0.0391132	FOXA2_FOXJ3	ENST00000591504.1|CCDC68|ENSG00000166510.9|coiled-coil domain containing 68
hg19_v2_chr4_-_140005443_140005650	0.0391035	FOXA2_FOXJ3	ENST00000510408.1|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor) 	ENST00000420916.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor) 	ENST00000358635.3|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr10_+_7745303_7745363	0.0385597	FOXA2_FOXJ3	ENST00000429820.1|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2 	ENST00000379587.4|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v2_chr21_+_40817749_40817868	0.0381967	FOXA2_FOXJ3	ENST00000380637.3|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein 	ENST00000380634.1|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein 	ENST00000458295.1|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein 	ENST00000440288.2|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein 	ENST00000380631.1|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein
hg19_v2_chr20_-_22566089_22566097	0.0381557	FOXA2_FOXJ3	ENST00000377115.4|FOXA2|ENSG00000125798.10|forkhead box A2
hg19_v2_chr3_+_98451275_98451361	0.0380259	FOXA2_FOXJ3	ENST00000265261.6|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6 	ENST00000497008.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr18_+_21033239_21033302	0.0375988	FOXA2_FOXJ3	ENST00000581585.1|RIOK3|ENSG00000101782.10|RIO kinase 3 	ENST00000577501.1|RIOK3|ENSG00000101782.10|RIO kinase 3
hg19_v2_chr9_-_110540419_110540419	0.0374673	FOXA2_FOXJ3	ENST00000398726.3|AL162389.1|ENSG00000214645.3|Uncharacterized protein
hg19_v2_chr3_-_107941209_107941227	0.0374552	FOXA2_FOXJ3	ENST00000492106.1|IFT57|ENSG00000114446.4|intraflagellar transport 57 homolog (Chlamydomonas)
hg19_v2_chr5_-_60240858_60240905	0.0372579	FOXA2_FOXJ3	ENST00000426742.2|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8 	ENST00000265038.5|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8 	ENST00000543101.1|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8 	ENST00000439176.1|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8
hg19_v2_chr4_+_110769258_110769358	0.0372517	FOXA2_FOXJ3	ENST00000594814.1|LRIT3|ENSG00000183423.7|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
hg19_v2_chr5_+_140625147_140625147	0.0372166	FOXA2_FOXJ3	ENST00000231173.3|PCDHB15|ENSG00000113248.3|protocadherin beta 15
hg19_v2_chr14_-_31926701_31926734	0.0366884	FOXA2_FOXJ3	ENST00000310850.4|DTD2|ENSG00000129480.8|D-tyrosyl-tRNA deacylase 2 (putative)
hg19_v2_chr12_-_48213735_48213763	0.0365961	FOXA2_FOXJ3	ENST00000417902.1|HDAC7|ENSG00000061273.13|histone deacetylase 7 	ENST00000417107.1|HDAC7|ENSG00000061273.13|histone deacetylase 7
hg19_v2_chr5_-_159846399_159846412	0.0365462	FOXA2_FOXJ3	ENST00000297151.4|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr15_-_65321943_65321984	0.0365212	FOXA2_FOXJ3	ENST00000220058.4|MTFMT|ENSG00000103707.5|mitochondrial methionyl-tRNA formyltransferase
hg19_v2_chr1_-_77685084_77685122	0.0364635	FOXA2_FOXJ3	ENST00000370812.3|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K 	ENST00000359130.1|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K 	ENST00000445065.1|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K 	ENST00000370813.5|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K
hg19_v2_chr5_-_153418407_153418503	0.0363257	FOXA2_FOXJ3	ENST00000522858.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000522634.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000523705.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000524246.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000520313.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000518102.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000351797.4|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000520667.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000519808.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000522395.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2
hg19_v2_chr6_-_100016492_100016526	0.0360685	FOXA2_FOXJ3	ENST00000369217.4|CCNC|ENSG00000112237.8|cyclin C 	ENST00000369220.4|CCNC|ENSG00000112237.8|cyclin C 	ENST00000482541.2|CCNC|ENSG00000112237.8|cyclin C
hg19_v2_chr11_-_47447767_47447817	0.0360446	FOXA2_FOXJ3	ENST00000530651.1|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000524447.2|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000531051.2|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000526993.1|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000602866.1|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3
hg19_v2_chr21_-_16254231_16254327	0.0359199	FOXA2_FOXJ3	ENST00000412426.1|AF127936.7|ENSG00000235609.4|AF127936.7	ENST00000418954.1|AF127936.7|ENSG00000235609.4|AF127936.7
hg19_v2_chr4_-_21950356_21950439	0.0358631	FOXA2_FOXJ3	ENST00000447367.2|KCNIP4|ENSG00000185774.10|Kv channel interacting protein 4 	ENST00000382152.2|KCNIP4|ENSG00000185774.10|Kv channel interacting protein 4
hg19_v2_chr14_-_58893876_58893924	0.0358233	FOXA2_FOXJ3	ENST00000555097.1|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast) 	ENST00000555404.1|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v2_chr14_+_19377522_19377522	0.0352334	FOXA2_FOXJ3	ENST00000550708.1|OR11H12|ENSG00000257115.1|olfactory receptor, family 11, subfamily H, member 12
hg19_v2_chr7_-_56119156_56119163	0.0351713	FOXA2_FOXJ3	ENST00000421312.1|PSPH|ENSG00000146733.9|phosphoserine phosphatase 	ENST00000416592.1|PSPH|ENSG00000146733.9|phosphoserine phosphatase
hg19_v2_chr1_+_178310581_178310606	0.0347753	FOXA2_FOXJ3	ENST00000462775.1|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chr1_-_114430169_114430195	0.0345583	FOXA2_FOXJ3	ENST00000393316.3|BCL2L15|ENSG00000188761.7|BCL2-like 15
hg19_v2_chr14_+_102606181_102606261	0.0343986	FOXA2_FOXJ3	ENST00000335263.5|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000322340.5|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000424963.2|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000342702.3|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000556807.1|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000499851.2|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000558567.1|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000299135.6|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000454394.2|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000556511.2|WDR20|ENSG00000140153.13|WD repeat domain 20
hg19_v2_chr19_+_6464243_6464325	0.0341622	FOXA2_FOXJ3	ENST00000600229.1|CRB3|ENSG00000130545.11|crumbs homolog 3 (Drosophila) 	ENST00000356762.3|CRB3|ENSG00000130545.11|crumbs homolog 3 (Drosophila)
hg19_v2_chr6_+_168418553_168418581	0.0338057	FOXA2_FOXJ3	ENST00000354419.2|KIF25|ENSG00000125337.12|kinesin family member 25 	ENST00000351261.3|KIF25|ENSG00000125337.12|kinesin family member 25
hg19_v2_chr22_-_16449805_16449805	0.0336056	FOXA2_FOXJ3	ENST00000252835.4|OR11H1|ENSG00000130538.4|olfactory receptor, family 11, subfamily H, member 1
hg19_v2_chr5_+_136070614_136070625	0.0334638	FOXA2_FOXJ3	ENST00000502421.1|CTB-1I21.1|ENSG00000250284.1|CTB-1I21.1
hg19_v2_chr19_+_46531127_46531136	0.0333087	FOXA2_FOXJ3	ENST00000601033.1|CTC-344H19.4|ENSG00000268401.1|CTC-344H19.4
hg19_v2_chr10_-_69597828_69597854	0.0332296	FOXA2_FOXJ3	ENST00000339758.7|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr20_-_25677465_25677497	0.0329008	FOXA2_FOXJ3	ENST00000252979.5|ZNF337|ENSG00000130684.9|zinc finger protein 337
hg19_v2_chr5_-_36241900_36241976	0.0327083	FOXA2_FOXJ3	ENST00000381937.4|NADK2|ENSG00000152620.8|NAD kinase 2, mitochondrial 	ENST00000514504.1|NADK2|ENSG00000152620.8|NAD kinase 2, mitochondrial
hg19_v2_chr12_+_99038998_99039078	0.0325977	FOXA2_FOXJ3	ENST00000359972.2|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000357310.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000339433.3|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000333991.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1
hg19_v2_chr4_-_100212132_100212185	0.0325964	FOXA2_FOXJ3	ENST00000209668.2|ADH1A|ENSG00000187758.3|alcohol dehydrogenase 1A (class I), alpha polypeptide
hg19_v2_chr5_+_176853669_176853701	0.0323914	FOXA2_FOXJ3	ENST00000355472.5|GRK6|ENSG00000198055.6|G protein-coupled receptor kinase 6
hg19_v2_chr13_-_53024725_53024809	0.031864	FOXA2_FOXJ3	ENST00000378060.4|VPS36|ENSG00000136100.8|vacuolar protein sorting 36 homolog (S. cerevisiae)
hg19_v2_chr20_-_35329063_35329078	0.0318378	FOXA2_FOXJ3	ENST00000422536.1|NDRG3|ENSG00000101079.16|NDRG family member 3
hg19_v2_chr14_+_56127960_56127979	0.0317079	FOXA2_FOXJ3	ENST00000553624.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr17_+_41363854_41363916	0.0315428	FOXA2_FOXJ3	ENST00000588693.1|TMEM106A|ENSG00000184988.4|transmembrane protein 106A 	ENST00000588659.1|TMEM106A|ENSG00000184988.4|transmembrane protein 106A 	ENST00000541594.1|TMEM106A|ENSG00000184988.4|transmembrane protein 106A 	ENST00000536052.1|TMEM106A|ENSG00000184988.4|transmembrane protein 106A 	ENST00000331615.3|TMEM106A|ENSG00000184988.4|transmembrane protein 106A
hg19_v2_chr6_-_42016385_42016706	0.0314262	FOXA2_FOXJ3	ENST00000502771.1|CCND3|ENSG00000112576.8|cyclin D3 	ENST00000508143.1|CCND3|ENSG00000112576.8|cyclin D3 	ENST00000514588.1|CCND3|ENSG00000112576.8|cyclin D3 	ENST00000510503.1|CCND3|ENSG00000112576.8|cyclin D3 	ENST00000415497.2|CCND3|ENSG00000112576.8|cyclin D3 	ENST00000372988.4|CCND3|ENSG00000112576.8|cyclin D3
hg19_v2_chr6_+_134758827_134758863	0.0313882	FOXA2_FOXJ3	ENST00000431422.1|LINC01010|ENSG00000236700.1|long intergenic non-protein coding RNA 1010
hg19_v2_chr16_+_56969284_56969314	0.0311803	FOXA2_FOXJ3	ENST00000568358.1|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr3_+_132036243_132036268	0.0311776	FOXA2_FOXJ3	ENST00000475741.1|ACPP|ENSG00000014257.11|acid phosphatase, prostate 	ENST00000351273.7|ACPP|ENSG00000014257.11|acid phosphatase, prostate
hg19_v2_chr12_+_97306295_97306354	0.0310882	FOXA2_FOXJ3	ENST00000457368.2|NEDD1|ENSG00000139350.7|neural precursor cell expressed, developmentally down-regulated 1
hg19_v2_chr5_-_36242119_36242381	0.031051	FOXA2_FOXJ3	ENST00000511088.1|NADK2|ENSG00000152620.8|NAD kinase 2, mitochondrial 	ENST00000282512.3|NADK2|ENSG00000152620.8|NAD kinase 2, mitochondrial 	ENST00000506945.1|NADK2|ENSG00000152620.8|NAD kinase 2, mitochondrial
hg19_v2_chr1_+_87797351_87797441	0.0309919	FOXA2_FOXJ3	ENST00000370542.1|LMO4|ENSG00000143013.8|LIM domain only 4
hg19_v2_chr14_+_24439148_24439196	0.0307451	FOXA2_FOXJ3	ENST00000543805.1|DHRS4L2|ENSG00000187630.10|dehydrogenase/reductase (SDR family) member 4 like 2 	ENST00000534993.1|DHRS4L2|ENSG00000187630.10|dehydrogenase/reductase (SDR family) member 4 like 2
hg19_v2_chr1_+_174669653_174669663	0.0306325	FOXA2_FOXJ3	ENST00000325589.5|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr12_+_49297887_49297898	0.0305748	FOXA2_FOXJ3	ENST00000266984.5|CCDC65|ENSG00000139537.6|coiled-coil domain containing 65
hg19_v2_chr19_+_36486078_36486123	0.0305378	FOXA2_FOXJ3	ENST00000378887.2|SDHAF1|ENSG00000205138.2|succinate dehydrogenase complex assembly factor 1
hg19_v2_chr5_+_140729649_140729828	0.0305293	FOXA2_FOXJ3	ENST00000523390.1|PCDHGB1|ENSG00000254221.1|protocadherin gamma subfamily B, 1
hg19_v2_chr1_+_84609944_84609964	0.0305186	FOXA2_FOXJ3	ENST00000370685.3|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr8_+_101349823_101349862	0.0304092	FOXA2_FOXJ3	ENST00000519566.1|KB-1991G8.1|ENSG00000253217.1|KB-1991G8.1
hg19_v2_chr5_-_32313082_32313120	0.0303648	FOXA2_FOXJ3	ENST00000382142.3|MTMR12|ENSG00000150712.6|myotubularin related protein 12
hg19_v2_chr1_-_231560790_231560790	0.0300826	FOXA2_FOXJ3	ENST00000366641.3|EGLN1|ENSG00000135766.8|egl-9 family hypoxia-inducible factor 1
hg19_v2_chr1_+_24646263_24646304	0.0299027	FOXA2_FOXJ3	ENST00000524724.1|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr6_+_74171301_74171493	0.0298856	FOXA2_FOXJ3	ENST00000415954.2|MTO1|ENSG00000135297.11|mitochondrial tRNA translation optimization 1 	ENST00000498286.1|MTO1|ENSG00000135297.11|mitochondrial tRNA translation optimization 1 	ENST00000370305.1|MTO1|ENSG00000135297.11|mitochondrial tRNA translation optimization 1 	ENST00000370300.4|MTO1|ENSG00000135297.11|mitochondrial tRNA translation optimization 1
hg19_v2_chr21_+_34602377_34602487	0.0298707	FOXA2_FOXJ3	ENST00000342101.3|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000413881.1|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000443073.1|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2
hg19_v2_chr1_+_246729815_246729841	0.0297997	FOXA2_FOXJ3	ENST00000366511.1|CNST|ENSG00000162852.9|consortin, connexin sorting protein
hg19_v2_chr2_+_170440844_170440897	0.0297157	FOXA2_FOXJ3	ENST00000260970.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000433207.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000409714.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000462903.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G)
hg19_v2_chr16_+_28857916_28857952	0.0296685	FOXA2_FOXJ3	ENST00000563591.1|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1
hg19_v2_chr8_-_101962777_101962805	0.0295979	FOXA2_FOXJ3	ENST00000395951.3|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr15_+_86098670_86098685	0.0292726	FOXA2_FOXJ3	ENST00000558811.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chrX_+_24167746_24167811	0.0292176	FOXA2_FOXJ3	ENST00000428571.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000539115.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked
hg19_v2_chr3_+_151591422_151591440	0.0290227	FOXA2_FOXJ3	ENST00000362032.5|SUCNR1|ENSG00000198829.5|succinate receptor 1
hg19_v2_chr20_-_1974692_1974732	0.0288205	FOXA2_FOXJ3	ENST00000217305.2|PDYN|ENSG00000101327.4|prodynorphin 	ENST00000539905.1|PDYN|ENSG00000101327.4|prodynorphin
hg19_v2_chr15_+_42697065_42697078	0.0284505	FOXA2_FOXJ3	ENST00000565559.1|CAPN3|ENSG00000092529.18|calpain 3, (p94)
hg19_v2_chr8_-_93978333_93978345	0.0284383	FOXA2_FOXJ3	ENST00000524037.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000520430.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000521617.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr13_+_73629107_73629148	0.0281202	FOXA2_FOXJ3	ENST00000539231.1|KLF5|ENSG00000102554.9|Kruppel-like factor 5 (intestinal)
hg19_v2_chr9_-_94877658_94877706	0.0281074	FOXA2_FOXJ3	ENST00000262554.2|SPTLC1|ENSG00000090054.9|serine palmitoyltransferase, long chain base subunit 1 	ENST00000337841.4|SPTLC1|ENSG00000090054.9|serine palmitoyltransferase, long chain base subunit 1
hg19_v2_chr12_-_92539614_92539673	0.0280305	FOXA2_FOXJ3	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chrX_+_54947229_54947284	0.0279495	FOXA2_FOXJ3	ENST00000442098.1|TRO|ENSG00000067445.16|trophinin 	ENST00000430420.1|TRO|ENSG00000067445.16|trophinin 	ENST00000453081.1|TRO|ENSG00000067445.16|trophinin 	ENST00000173898.7|TRO|ENSG00000067445.16|trophinin 	ENST00000319167.8|TRO|ENSG00000067445.16|trophinin 	ENST00000375022.4|TRO|ENSG00000067445.16|trophinin 	ENST00000399736.1|TRO|ENSG00000067445.16|trophinin 	ENST00000440072.1|TRO|ENSG00000067445.16|trophinin 	ENST00000420798.2|TRO|ENSG00000067445.16|trophinin 	ENST00000431115.1|TRO|ENSG00000067445.16|trophinin 	ENST00000440759.1|TRO|ENSG00000067445.16|trophinin 	ENST00000375041.2|TRO|ENSG00000067445.16|trophinin
hg19_v2_chr16_-_2314222_2314332	0.0277014	FOXA2_FOXJ3	ENST00000566397.1|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain
hg19_v2_chr13_+_78315295_78315337	0.0274481	FOXA2_FOXJ3	ENST00000351546.3|SLAIN1|ENSG00000139737.17|SLAIN motif family, member 1
hg19_v2_chr12_-_21927736_21927768	0.0273426	FOXA2_FOXJ3	ENST00000240662.2|KCNJ8|ENSG00000121361.3|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v2_chr4_+_86749045_86749070	0.0272939	FOXA2_FOXJ3	ENST00000514229.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr8_-_95449155_95449188	0.0270458	FOXA2_FOXJ3	ENST00000481490.2|FSBP|ENSG00000265817.1|fibrinogen silencer binding protein
hg19_v2_chr14_+_57046530_57046602	0.026999	FOXA2_FOXJ3	ENST00000536419.1|TMEM260|ENSG00000070269.9|transmembrane protein 260 	ENST00000538838.1|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr3_+_142315294_142315315	0.0268163	FOXA2_FOXJ3	ENST00000464320.1|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr1_+_45140400_45140427	0.0267938	FOXA2_FOXJ3	ENST00000453711.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228
hg19_v2_chr15_+_86087267_86087274	0.0266369	FOXA2_FOXJ3	ENST00000558166.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr5_+_135468516_135468621	0.0266083	FOXA2_FOXJ3	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr9_-_13175823_13175869	0.0264439	FOXA2_FOXJ3	ENST00000545857.1|MPDZ|ENSG00000107186.12|multiple PDZ domain protein
hg19_v2_chr5_+_65222500_65222601	0.0264214	FOXA2_FOXJ3	ENST00000511297.1|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein 	ENST00000506030.1|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein
hg19_v2_chr1_-_246729544_246729626	0.026309	FOXA2_FOXJ3	ENST00000544618.1|TFB2M|ENSG00000162851.6|transcription factor B2, mitochondrial 	ENST00000366514.4|TFB2M|ENSG00000162851.6|transcription factor B2, mitochondrial
hg19_v2_chr17_-_41985096_41985139	0.0262752	FOXA2_FOXJ3	ENST00000269095.4|MPP2|ENSG00000108852.10|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) 	ENST00000523220.1|MPP2|ENSG00000108852.10|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
hg19_v2_chr7_+_128312346_128312371	0.026088	FOXA2_FOXJ3	ENST00000480462.1|FAM71F2|ENSG00000205085.4|family with sequence similarity 71, member F2 	ENST00000378704.3|FAM71F2|ENSG00000205085.4|family with sequence similarity 71, member F2 	ENST00000477515.1|FAM71F2|ENSG00000205085.4|family with sequence similarity 71, member F2
hg19_v2_chr11_+_34999328_34999334	0.026072	FOXA2_FOXJ3	ENST00000526309.1|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X
hg19_v2_chr2_-_170430366_170430390	0.0260289	FOXA2_FOXJ3	ENST00000453153.2|FASTKD1|ENSG00000138399.13|FAST kinase domains 1 	ENST00000445210.1|FASTKD1|ENSG00000138399.13|FAST kinase domains 1
hg19_v2_chr15_-_74658493_74658504	0.0258876	FOXA2_FOXJ3	ENST00000419019.2|CYP11A1|ENSG00000140459.13|cytochrome P450, family 11, subfamily A, polypeptide 1 	ENST00000569662.1|CYP11A1|ENSG00000140459.13|cytochrome P450, family 11, subfamily A, polypeptide 1
hg19_v2_chr13_-_103451307_103451380	0.0257888	FOXA2_FOXJ3	ENST00000376004.4|KDELC1|ENSG00000134901.8|KDEL (Lys-Asp-Glu-Leu) containing 1
hg19_v2_chr2_-_27886676_27886714	0.0256724	FOXA2_FOXJ3	ENST00000337768.5|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like
hg19_v2_chr5_-_98262240_98262240	0.0255011	FOXA2_FOXJ3	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr3_+_169539710_169539710	0.0253578	FOXA2_FOXJ3	ENST00000340806.6|LRRIQ4|ENSG00000188306.6|leucine-rich repeats and IQ motif containing 4
hg19_v2_chr15_+_56657613_56657651	0.0253522	FOXA2_FOXJ3	ENST00000352903.2|TEX9|ENSG00000151575.10|testis expressed 9 	ENST00000537232.1|TEX9|ENSG00000151575.10|testis expressed 9 	ENST00000561221.2|TEX9|ENSG00000151575.10|testis expressed 9 	ENST00000558083.2|TEX9|ENSG00000151575.10|testis expressed 9
hg19_v2_chr19_+_3880581_3880692	0.025059	FOXA2_FOXJ3	ENST00000450849.2|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type 	ENST00000301260.6|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type 	ENST00000398448.3|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type
hg19_v2_chr17_-_65235916_65235949	0.0247201	FOXA2_FOXJ3	ENST00000579861.1|HELZ|ENSG00000198265.7|helicase with zinc finger
hg19_v2_chr5_+_147774275_147774340	0.0246535	FOXA2_FOXJ3	ENST00000513826.1|FBXO38|ENSG00000145868.12|F-box protein 38
hg19_v2_chr2_-_201729284_201729359	0.0246507	FOXA2_FOXJ3	ENST00000434813.2|CLK1|ENSG00000013441.11|CDC-like kinase 1
hg19_v2_chr12_+_79439405_79439421	0.0243131	FOXA2_FOXJ3	ENST00000552744.1|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr15_-_74658519_74658558	0.0237417	FOXA2_FOXJ3	ENST00000450547.1|CYP11A1|ENSG00000140459.13|cytochrome P450, family 11, subfamily A, polypeptide 1 	ENST00000358632.4|CYP11A1|ENSG00000140459.13|cytochrome P450, family 11, subfamily A, polypeptide 1
hg19_v2_chr1_-_101360205_101360231	0.0236031	FOXA2_FOXJ3	ENST00000450240.1|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2
hg19_v2_chr12_-_106480587_106480734	0.0232597	FOXA2_FOXJ3	ENST00000548902.1|NUAK1|ENSG00000074590.9|NUAK family, SNF1-like kinase, 1
hg19_v2_chr4_+_15376165_15376178	0.023167	FOXA2_FOXJ3	ENST00000382383.3|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7 	ENST00000429690.1|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7
hg19_v2_chr5_+_159614374_159614397	0.023141	FOXA2_FOXJ3	ENST00000393980.4|FABP6|ENSG00000170231.11|fatty acid binding protein 6, ileal
hg19_v2_chr19_-_42931567_42931581	0.0230658	FOXA2_FOXJ3	ENST00000244289.4|LIPE|ENSG00000079435.5|lipase, hormone-sensitive
hg19_v2_chr6_-_114194483_114194525	0.0227396	FOXA2_FOXJ3	ENST00000434296.2|RP1-249H1.4|ENSG00000227502.2|RP1-249H1.4
hg19_v2_chr18_+_21032781_21032795	0.0225564	FOXA2_FOXJ3	ENST00000339486.3|RIOK3|ENSG00000101782.10|RIO kinase 3
hg19_v2_chr11_-_94227029_94227074	0.0224041	FOXA2_FOXJ3	ENST00000323977.3|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000536754.1|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000323929.3|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)
hg19_v2_chr3_+_46449049_46449111	0.0223991	FOXA2_FOXJ3	ENST00000357392.4|CCRL2|ENSG00000121797.9|chemokine (C-C motif) receptor-like 2 	ENST00000400880.3|CCRL2|ENSG00000121797.9|chemokine (C-C motif) receptor-like 2 	ENST00000433848.1|CCRL2|ENSG00000121797.9|chemokine (C-C motif) receptor-like 2
hg19_v2_chr17_-_19290483_19290553	0.0221438	FOXA2_FOXJ3	ENST00000395592.2|MFAP4|ENSG00000166482.7|microfibrillar-associated protein 4 	ENST00000299610.4|MFAP4|ENSG00000166482.7|microfibrillar-associated protein 4
hg19_v2_chr1_+_221054584_221054584	0.0220317	FOXA2_FOXJ3	ENST00000549319.1|HLX|ENSG00000136630.11|H2.0-like homeobox
hg19_v2_chr16_+_24857162_24857302	0.0219912	FOXA2_FOXJ3	ENST00000347898.3|SLC5A11|ENSG00000158865.8|solute carrier family 5 (sodium/inositol cotransporter), member 11
hg19_v2_chr8_-_40755333_40755352	0.0219267	FOXA2_FOXJ3	ENST00000297737.6|ZMAT4|ENSG00000165061.10|zinc finger, matrin-type 4 	ENST00000315769.7|ZMAT4|ENSG00000165061.10|zinc finger, matrin-type 4
hg19_v2_chr8_+_100025476_100025548	0.0216425	FOXA2_FOXJ3	ENST00000355155.1|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000357162.2|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000358544.2|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000395996.1|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000441350.2|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast)
hg19_v2_chr7_-_38389573_38389623	0.0216271	FOXA2_FOXJ3	ENST00000390344.2|TRGV5|ENSG00000211697.2|T cell receptor gamma variable 5
hg19_v2_chr12_+_112191694_112191694	0.0215293	FOXA2_FOXJ3	ENST00000546840.2|RP11-162P23.2|ENSG00000257767.2|RP11-162P23.2
hg19_v2_chr8_+_48920960_48921011	0.0215169	FOXA2_FOXJ3	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr17_-_34195889_34195899	0.0214529	FOXA2_FOXJ3	ENST00000311880.2|C17orf66|ENSG00000172653.7|chromosome 17 open reading frame 66
hg19_v2_chrX_+_56644819_56644825	0.0212236	FOXA2_FOXJ3	ENST00000446028.1|RP11-431N15.2|ENSG00000230105.1|RP11-431N15.2
hg19_v2_chr19_-_46142362_46142504	0.0211069	FOXA2_FOXJ3	ENST00000586770.1|EML2|ENSG00000125746.10|echinoderm microtubule associated protein like 2 	ENST00000591721.1|EML2|ENSG00000125746.10|echinoderm microtubule associated protein like 2
hg19_v2_chr8_-_41909496_41909512	0.0208138	FOXA2_FOXJ3	ENST00000265713.2|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000406337.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000396930.3|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000485568.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000426524.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A
hg19_v2_chr19_+_36132631_36132695	0.0207994	FOXA2_FOXJ3	ENST00000379026.2|ETV2|ENSG00000105672.10|ets variant 2 	ENST00000379023.4|ETV2|ENSG00000105672.10|ets variant 2 	ENST00000402764.2|ETV2|ENSG00000105672.10|ets variant 2 	ENST00000479824.1|ETV2|ENSG00000105672.10|ets variant 2
hg19_v2_chr17_-_34195862_34195877	0.0206128	FOXA2_FOXJ3	ENST00000592980.1|C17orf66|ENSG00000172653.7|chromosome 17 open reading frame 66 	ENST00000587626.1|C17orf66|ENSG00000172653.7|chromosome 17 open reading frame 66
hg19_v2_chr12_-_12837423_12837501	0.020493	FOXA2_FOXJ3	ENST00000540510.1|GPR19|ENSG00000183150.3|G protein-coupled receptor 19
hg19_v2_chr17_-_1418972_1418995	0.0203596	FOXA2_FOXJ3	ENST00000571274.1|INPP5K|ENSG00000132376.15|inositol polyphosphate-5-phosphatase K
hg19_v2_chr6_+_26251835_26251879	0.0203525	FOXA2_FOXJ3	ENST00000356350.2|HIST1H2BH|ENSG00000197459.2|histone cluster 1, H2bh
hg19_v2_chr16_+_31128978_31129002	0.0203484	FOXA2_FOXJ3	ENST00000448516.2|KAT8|ENSG00000103510.15|K(lysine) acetyltransferase 8 	ENST00000219797.4|KAT8|ENSG00000103510.15|K(lysine) acetyltransferase 8
hg19_v2_chrX_-_70329118_70329194	0.0201317	FOXA2_FOXJ3	ENST00000374188.3|IL2RG|ENSG00000147168.8|interleukin 2 receptor, gamma
hg19_v2_chr14_+_56127989_56128008	0.0201036	FOXA2_FOXJ3	ENST00000555573.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr3_+_39448180_39448226	0.0199735	FOXA2_FOXJ3	ENST00000301821.6|RPSA|ENSG00000168028.9|ribosomal protein SA 	ENST00000458478.1|RPSA|ENSG00000168028.9|ribosomal protein SA 	ENST00000443003.1|RPSA|ENSG00000168028.9|ribosomal protein SA
hg19_v2_chr1_+_15853308_15853413	0.0197911	FOXA2_FOXJ3	ENST00000375838.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375847.3|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375849.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16
hg19_v2_chr2_-_27886460_27886511	0.0195976	FOXA2_FOXJ3	ENST00000404798.2|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like 	ENST00000405491.1|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like 	ENST00000464789.2|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like 	ENST00000406540.1|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like
hg19_v2_chr6_-_80247140_80247175	0.0195538	FOXA2_FOXJ3	ENST00000392959.1|LCA5|ENSG00000135338.9|Leber congenital amaurosis 5 	ENST00000467898.3|LCA5|ENSG00000135338.9|Leber congenital amaurosis 5
hg19_v2_chr1_+_73771844_73771922	0.0194256	FOXA2_FOXJ3	ENST00000440762.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000444827.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000415686.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000411903.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1
hg19_v2_chr17_-_685493_685548	0.0192785	FOXA2_FOXJ3	ENST00000536578.1|GLOD4|ENSG00000167699.9|glyoxalase domain containing 4 	ENST00000301328.5|GLOD4|ENSG00000167699.9|glyoxalase domain containing 4 	ENST00000576419.1|GLOD4|ENSG00000167699.9|glyoxalase domain containing 4
hg19_v2_chr8_+_95558771_95558771	0.0191305	FOXA2_FOXJ3	ENST00000391679.1|AC023632.1|ENSG00000212997.1|HCG2009141; PRO2397; Uncharacterized protein
hg19_v2_chr5_+_141346385_141346437	0.0190126	FOXA2_FOXJ3	ENST00000513019.1|RNF14|ENSG00000013561.13|ring finger protein 14 	ENST00000356143.1|RNF14|ENSG00000013561.13|ring finger protein 14
hg19_v2_chr1_-_100231349_100231349	0.0185755	FOXA2_FOXJ3	ENST00000287474.5|FRRS1|ENSG00000156869.8|ferric-chelate reductase 1 	ENST00000414213.1|FRRS1|ENSG00000156869.8|ferric-chelate reductase 1
hg19_v2_chr2_-_161056802_161056815	0.0185115	FOXA2_FOXJ3	ENST00000283249.2|ITGB6|ENSG00000115221.6|integrin, beta 6 	ENST00000409872.1|ITGB6|ENSG00000115221.6|integrin, beta 6
hg19_v2_chr12_-_57472522_57472556	0.0184684	FOXA2_FOXJ3	ENST00000379391.3|TMEM194A|ENSG00000166881.5|transmembrane protein 194A 	ENST00000300128.4|TMEM194A|ENSG00000166881.5|transmembrane protein 194A
hg19_v2_chr2_+_120770645_120770669	0.0184203	FOXA2_FOXJ3	ENST00000443902.2|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr12_+_32832203_32832270	0.0181883	FOXA2_FOXJ3	ENST00000553257.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000549701.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000358214.5|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000266481.6|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000551476.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000550154.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000547312.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000414834.2|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000381000.4|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000548750.1|DNM1L|ENSG00000087470.13|dynamin 1-like
hg19_v2_chr10_+_52724028_52724035	0.018148	FOXA2_FOXJ3	ENST00000561565.1|RP11-96B5.4|ENSG00000261368.1|RP11-96B5.4
hg19_v2_chr1_+_222910538_222910572	0.0181159	FOXA2_FOXJ3	ENST00000434700.1|FAM177B|ENSG00000197520.6|family with sequence similarity 177, member B 	ENST00000445590.2|FAM177B|ENSG00000197520.6|family with sequence similarity 177, member B
hg19_v2_chr11_+_67374323_67374437	0.0180658	FOXA2_FOXJ3	ENST00000322776.6|NDUFV1|ENSG00000167792.7|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa 	ENST00000532303.1|NDUFV1|ENSG00000167792.7|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa 	ENST00000532244.1|NDUFV1|ENSG00000167792.7|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa 	ENST00000528328.1|NDUFV1|ENSG00000167792.7|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa 	ENST00000529927.1|NDUFV1|ENSG00000167792.7|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa 	ENST00000532343.1|NDUFV1|ENSG00000167792.7|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa 	ENST00000415352.2|NDUFV1|ENSG00000167792.7|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa 	ENST00000533075.1|NDUFV1|ENSG00000167792.7|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa 	ENST00000529867.1|NDUFV1|ENSG00000167792.7|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa 	ENST00000530638.1|NDUFV1|ENSG00000167792.7|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa
hg19_v2_chr22_-_22337204_22337215	0.0178167	FOXA2_FOXJ3	ENST00000430142.1|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta 	ENST00000357179.5|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta
hg19_v2_chr4_-_111120132_111120167	0.017789	FOXA2_FOXJ3	ENST00000506625.1|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr11_-_94226964_94227025	0.0175809	FOXA2_FOXJ3	ENST00000538923.1|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000540013.1|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000407439.3|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000393241.4|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)
hg19_v2_chr16_+_48278178_48278336	0.0174875	FOXA2_FOXJ3	ENST00000285737.4|LONP2|ENSG00000102910.9|lon peptidase 2, peroxisomal 	ENST00000535754.1|LONP2|ENSG00000102910.9|lon peptidase 2, peroxisomal
hg19_v2_chr14_-_31926623_31926656	0.0171405	FOXA2_FOXJ3	ENST00000356180.4|DTD2|ENSG00000129480.8|D-tyrosyl-tRNA deacylase 2 (putative)
hg19_v2_chr11_+_71791359_71791387	0.0171007	FOXA2_FOXJ3	ENST00000419228.1|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing 	ENST00000435085.1|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing 	ENST00000307198.7|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing 	ENST00000538413.1|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing
hg19_v2_chr19_-_50666404_50666424	0.0169369	FOXA2_FOXJ3	ENST00000600293.1|IZUMO2|ENSG00000161652.8|IZUMO family member 2
hg19_v2_chr14_-_60632011_60632035	0.0168657	FOXA2_FOXJ3	ENST00000554101.1|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7 	ENST00000557137.1|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7
hg19_v2_chr9_+_21409146_21409146	0.0167481	FOXA2_FOXJ3	ENST00000380205.1|IFNA8|ENSG00000120242.3|interferon, alpha 8
hg19_v2_chr2_-_201729393_201729428	0.0166928	FOXA2_FOXJ3	ENST00000321356.4|CLK1|ENSG00000013441.11|CDC-like kinase 1
hg19_v2_chr8_+_21777159_21777221	0.0166107	FOXA2_FOXJ3	ENST00000434536.1|XPO7|ENSG00000130227.12|exportin 7 	ENST00000252512.9|XPO7|ENSG00000130227.12|exportin 7
hg19_v2_chrX_+_77154935_77155012	0.0157222	FOXA2_FOXJ3	ENST00000481445.1|COX7B|ENSG00000131174.4|cytochrome c oxidase subunit VIIb
hg19_v2_chr16_-_28857677_28857729	0.015556	FOXA2_FOXJ3	ENST00000313511.3|TUFM|ENSG00000178952.4|Tu translation elongation factor, mitochondrial
hg19_v2_chr9_+_124922171_124922224	0.0151628	FOXA2_FOXJ3	ENST00000373764.3|MORN5|ENSG00000185681.8|MORN repeat containing 5 	ENST00000536616.1|MORN5|ENSG00000185681.8|MORN repeat containing 5
hg19_v2_chr12_-_71031185_71031215	0.0149229	FOXA2_FOXJ3	ENST00000548122.1|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B 	ENST00000551525.1|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B 	ENST00000550358.1|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B
hg19_v2_chr5_-_131132614_131132648	0.0147138	FOXA2_FOXJ3	ENST00000307968.7|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000307954.8|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr6_-_32160622_32160719	0.014368	FOXA2_FOXJ3	ENST00000487761.1|GPSM3|ENSG00000213654.5|G-protein signaling modulator 3 	ENST00000375040.3|GPSM3|ENSG00000213654.5|G-protein signaling modulator 3
hg19_v2_chr14_-_31926595_31926618	0.0143318	FOXA2_FOXJ3	ENST00000547378.1|RP11-176H8.1|ENSG00000203546.3|Uncharacterized protein
hg19_v2_chr2_+_135809835_135809874	0.0142564	FOXA2_FOXJ3	ENST00000264158.8|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000539493.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000442034.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000425393.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic)
hg19_v2_chr6_-_105307417_105307435	0.0142103	FOXA2_FOXJ3	ENST00000524020.1|HACE1|ENSG00000085382.7|HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1
hg19_v2_chr17_-_49021974_49022074	0.0140982	FOXA2_FOXJ3	ENST00000501718.2|RP11-700H6.1|ENSG00000247011.2|RP11-700H6.1
hg19_v2_chr16_-_21875424_21875424	0.0138556	FOXA2_FOXJ3	ENST00000541674.1|NPIPB4|ENSG00000185864.12|nuclear pore complex interacting protein family, member B4
hg19_v2_chr10_+_124739911_124739957	0.0136308	FOXA2_FOXJ3	ENST00000405485.1|PSTK|ENSG00000179988.9|phosphoseryl-tRNA kinase
hg19_v2_chr16_-_69788816_69788846	0.013433	FOXA2_FOXJ3	ENST00000268802.5|NOB1|ENSG00000141101.8|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
hg19_v2_chr19_-_40791302_40791443	0.0129947	FOXA2_FOXJ3	ENST00000392038.2|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2 	ENST00000578123.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr3_+_180319918_180320020	0.0127331	FOXA2_FOXJ3	ENST00000296015.4|TTC14|ENSG00000163728.6|tetratricopeptide repeat domain 14 	ENST00000491380.1|TTC14|ENSG00000163728.6|tetratricopeptide repeat domain 14 	ENST00000412756.2|TTC14|ENSG00000163728.6|tetratricopeptide repeat domain 14 	ENST00000382584.4|TTC14|ENSG00000163728.6|tetratricopeptide repeat domain 14
hg19_v2_chrX_+_24167828_24167907	0.0126274	FOXA2_FOXJ3	ENST00000379188.3|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000419690.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000379177.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000304543.5|ZFX|ENSG00000005889.11|zinc finger protein, X-linked
hg19_v2_chr7_+_106809406_106809460	0.0125519	FOXA2_FOXJ3	ENST00000468410.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000478930.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000464009.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000222574.4|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr19_+_15160130_15160195	0.0124767	FOXA2_FOXJ3	ENST00000427043.3|CASP14|ENSG00000105141.4|caspase 14, apoptosis-related cysteine peptidase
hg19_v2_chr2_-_161056762_161056799	0.0123275	FOXA2_FOXJ3	ENST00000428609.2|ITGB6|ENSG00000115221.6|integrin, beta 6 	ENST00000409967.2|ITGB6|ENSG00000115221.6|integrin, beta 6
hg19_v2_chr3_+_136649311_136649360	0.012258	FOXA2_FOXJ3	ENST00000469404.1|NCK1|ENSG00000158092.2|NCK adaptor protein 1 	ENST00000467911.1|NCK1|ENSG00000158092.2|NCK adaptor protein 1
hg19_v2_chr22_-_22337146_22337153	0.0122413	FOXA2_FOXJ3	ENST00000398793.2|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta
hg19_v2_chr6_-_13621126_13621126	0.0121302	FOXA2_FOXJ3	ENST00000600057.1|AL441883.1|ENSG00000268059.1|Uncharacterized protein
hg19_v2_chr5_+_154092396_154092462	0.0119691	FOXA2_FOXJ3	ENST00000336314.4|LARP1|ENSG00000155506.12|La ribonucleoprotein domain family, member 1
hg19_v2_chr12_+_21679220_21679252	0.011828	FOXA2_FOXJ3	ENST00000256969.2|C12orf39|ENSG00000134548.5|chromosome 12 open reading frame 39
hg19_v2_chr5_-_137674000_137674044	0.0118119	FOXA2_FOXJ3	ENST00000510119.1|CDC25C|ENSG00000158402.14|cell division cycle 25C 	ENST00000513970.1|CDC25C|ENSG00000158402.14|cell division cycle 25C
hg19_v2_chr3_-_150421728_150421746	0.0115744	FOXA2_FOXJ3	ENST00000295910.6|FAM194A|ENSG00000163645.10|family with sequence similarity 194, member A 	ENST00000491361.1|FAM194A|ENSG00000163645.10|family with sequence similarity 194, member A
hg19_v2_chr10_+_124739964_124739994	0.0115274	FOXA2_FOXJ3	ENST00000406217.2|PSTK|ENSG00000179988.9|phosphoseryl-tRNA kinase
hg19_v2_chr3_-_185641681_185641781	0.0113014	FOXA2_FOXJ3	ENST00000259043.7|TRA2B|ENSG00000136527.13|transformer 2 beta homolog (Drosophila)
hg19_v2_chr5_-_218251_218330	0.0112487	FOXA2_FOXJ3	ENST00000296824.3|CCDC127|ENSG00000164366.3|coiled-coil domain containing 127
hg19_v2_chr2_-_170430277_170430361	0.0109851	FOXA2_FOXJ3	ENST00000438035.1|FASTKD1|ENSG00000138399.13|FAST kinase domains 1 	ENST00000453929.2|FASTKD1|ENSG00000138399.13|FAST kinase domains 1
hg19_v2_chr12_+_53836339_53836474	0.0108128	FOXA2_FOXJ3	ENST00000549135.1|PRR13|ENSG00000205352.6|proline rich 13
hg19_v2_chrX_+_134975858_134975885	0.0107527	FOXA2_FOXJ3	ENST00000537770.1|SAGE1|ENSG00000181433.5|sarcoma antigen 1
hg19_v2_chr6_+_56911336_56911347	0.0106056	FOXA2_FOXJ3	ENST00000370733.4|KIAA1586|ENSG00000168116.9|KIAA1586
hg19_v2_chr1_+_24018269_24018274	0.0105131	FOXA2_FOXJ3	ENST00000374550.3|RPL11|ENSG00000142676.8|ribosomal protein L11
hg19_v2_chr6_+_4087664_4087683	0.0104604	FOXA2_FOXJ3	ENST00000430835.2|C6orf201|ENSG00000185689.11|chromosome 6 open reading frame 201
hg19_v2_chr5_+_70751442_70751456	0.0102949	FOXA2_FOXJ3	ENST00000358731.4|BDP1|ENSG00000145734.14|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 	ENST00000380675.2|BDP1|ENSG00000145734.14|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
hg19_v2_chr13_+_98086445_98086493	0.0102054	FOXA2_FOXJ3	ENST00000245304.4|RAP2A|ENSG00000125249.6|RAP2A, member of RAS oncogene family
hg19_v2_chr1_-_39339777_39339777	0.0101921	FOXA2_FOXJ3	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr6_+_12958137_12958234	0.0101501	FOXA2_FOXJ3	ENST00000457702.2|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1 	ENST00000379345.2|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr19_+_55417499_55417521	0.0101221	FOXA2_FOXJ3	ENST00000291890.4|NCR1|ENSG00000189430.8|natural cytotoxicity triggering receptor 1 	ENST00000447255.1|NCR1|ENSG00000189430.8|natural cytotoxicity triggering receptor 1 	ENST00000598576.1|NCR1|ENSG00000189430.8|natural cytotoxicity triggering receptor 1 	ENST00000594765.1|NCR1|ENSG00000189430.8|natural cytotoxicity triggering receptor 1
hg19_v2_chr2_-_172750733_172750762	0.0101126	FOXA2_FOXJ3	ENST00000392592.4|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12 	ENST00000422440.2|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12
hg19_v2_chr2_-_46844242_46844258	0.0099475	FOXA2_FOXJ3	ENST00000281382.6|PIGF|ENSG00000151665.8|phosphatidylinositol glycan anchor biosynthesis, class F
hg19_v2_chr19_-_40030861_40030873	0.00969686	FOXA2_FOXJ3	ENST00000390658.2|EID2|ENSG00000176396.9|EP300 interacting inhibitor of differentiation 2
hg19_v2_chr19_+_12721725_12721758	0.00946695	FOXA2_FOXJ3	ENST00000446165.1|ZNF791|ENSG00000173875.9|zinc finger protein 791 	ENST00000343325.4|ZNF791|ENSG00000173875.9|zinc finger protein 791 	ENST00000458122.3|ZNF791|ENSG00000173875.9|zinc finger protein 791
hg19_v2_chr17_-_76824975_76825046	0.00945547	FOXA2_FOXJ3	ENST00000586066.2|USP36|ENSG00000055483.15|ubiquitin specific peptidase 36
hg19_v2_chr3_+_147657764_147657816	0.00934363	FOXA2_FOXJ3	ENST00000467198.1|RP11-71N10.1|ENSG00000239922.1|RP11-71N10.1	ENST00000485006.1|RP11-71N10.1|ENSG00000239922.1|RP11-71N10.1
hg19_v2_chr18_+_52258390_52258477	0.00928424	FOXA2_FOXJ3	ENST00000321600.1|DYNAP|ENSG00000178690.2|dynactin associated protein
hg19_v2_chr3_-_58522880_58522905	0.00925944	FOXA2_FOXJ3	ENST00000474098.1|ACOX2|ENSG00000168306.8|acyl-CoA oxidase 2, branched chain
hg19_v2_chr8_+_67104323_67104350	0.00922622	FOXA2_FOXJ3	ENST00000518412.1|LINC00967|ENSG00000253138.1|long intergenic non-protein coding RNA 967 	ENST00000518035.1|LINC00967|ENSG00000253138.1|long intergenic non-protein coding RNA 967 	ENST00000517725.1|LINC00967|ENSG00000253138.1|long intergenic non-protein coding RNA 967
hg19_v2_chr16_+_28565230_28565257	0.00913236	FOXA2_FOXJ3	ENST00000317058.3|CCDC101|ENSG00000176476.4|coiled-coil domain containing 101
hg19_v2_chr11_-_92930556_92930621	0.00908912	FOXA2_FOXJ3	ENST00000529184.1|SLC36A4|ENSG00000180773.10|solute carrier family 36 (proton/amino acid symporter), member 4
hg19_v2_chr22_+_24407642_24407770	0.00904691	FOXA2_FOXJ3	ENST00000454754.1|CABIN1|ENSG00000099991.12|calcineurin binding protein 1 	ENST00000263119.5|CABIN1|ENSG00000099991.12|calcineurin binding protein 1
hg19_v2_chr6_-_80247105_80247133	0.00899053	FOXA2_FOXJ3	ENST00000369846.4|LCA5|ENSG00000135338.9|Leber congenital amaurosis 5
hg19_v2_chr7_+_79998864_79998896	0.00895182	FOXA2_FOXJ3	ENST00000435819.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr12_+_99038919_99038954	0.00889665	FOXA2_FOXJ3	ENST00000551964.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1
hg19_v2_chr15_-_102192567_102192597	0.00866239	FOXA2_FOXJ3	ENST00000333202.3|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000428002.2|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000559107.1|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000347970.3|TM2D3|ENSG00000184277.8|TM2 domain containing 3
hg19_v2_chr9_-_35812140_35812191	0.00856619	FOXA2_FOXJ3	ENST00000497810.1|SPAG8|ENSG00000137098.9|sperm associated antigen 8 	ENST00000396638.2|SPAG8|ENSG00000137098.9|sperm associated antigen 8 	ENST00000484764.1|SPAG8|ENSG00000137098.9|sperm associated antigen 8
hg19_v2_chr11_+_112041253_112041253	0.00851498	FOXA2_FOXJ3	ENST00000532612.1|AP002884.3|ENSG00000272790.1|AP002884.3
hg19_v2_chr17_+_7942335_7942385	0.00822151	FOXA2_FOXJ3	ENST00000380183.4|ALOX15B|ENSG00000179593.11|arachidonate 15-lipoxygenase, type B 	ENST00000572022.1|ALOX15B|ENSG00000179593.11|arachidonate 15-lipoxygenase, type B 	ENST00000380173.2|ALOX15B|ENSG00000179593.11|arachidonate 15-lipoxygenase, type B
hg19_v2_chr10_-_61899124_61899158	0.00807502	FOXA2_FOXJ3	ENST00000373815.1|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr17_-_30185971_30186093	0.00788613	FOXA2_FOXJ3	ENST00000378634.2|COPRS|ENSG00000172301.6|coordinator of PRMT5, differentiation stimulator
hg19_v2_chr12_-_54582655_54582780	0.00766745	FOXA2_FOXJ3	ENST00000504338.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000514685.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000504797.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000513838.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000505128.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000337581.3|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000503306.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000243112.5|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000514196.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000506169.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000507904.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000508394.2|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1
hg19_v2_chr7_-_117512264_117512281	0.00743577	FOXA2_FOXJ3	ENST00000454375.1|CTTNBP2|ENSG00000077063.6|cortactin binding protein 2
hg19_v2_chr11_-_129765427_129765492	0.00734659	FOXA2_FOXJ3	ENST00000526884.1|NFRKB|ENSG00000170322.10|nuclear factor related to kappaB binding protein 	ENST00000532225.1|NFRKB|ENSG00000170322.10|nuclear factor related to kappaB binding protein 	ENST00000529319.1|NFRKB|ENSG00000170322.10|nuclear factor related to kappaB binding protein
hg19_v2_chr19_-_19932501_19932569	0.00717955	FOXA2_FOXJ3	ENST00000540806.2|ZNF506|ENSG00000081665.9|zinc finger protein 506 	ENST00000590766.1|ZNF506|ENSG00000081665.9|zinc finger protein 506 	ENST00000587452.1|ZNF506|ENSG00000081665.9|zinc finger protein 506 	ENST00000590274.1|CTC-559E9.4|ENSG00000267581.1|CTC-559E9.4	ENST00000545006.1|ZNF506|ENSG00000081665.9|zinc finger protein 506 	ENST00000590319.1|ZNF506|ENSG00000081665.9|zinc finger protein 506 	ENST00000587461.1|ZNF506|ENSG00000081665.9|zinc finger protein 506 	ENST00000450683.2|ZNF506|ENSG00000081665.9|zinc finger protein 506 	ENST00000443905.2|ZNF506|ENSG00000081665.9|zinc finger protein 506
hg19_v2_chr12_+_32687221_32687267	0.00684794	FOXA2_FOXJ3	ENST00000525053.1|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4
hg19_v2_chr14_+_67291158_67291192	0.00680735	FOXA2_FOXJ3	ENST00000555456.1|GPHN|ENSG00000171723.11|gephyrin
hg19_v2_chr14_-_95624227_95624347	0.006746	FOXA2_FOXJ3	ENST00000526495.1|DICER1|ENSG00000100697.10|dicer 1, ribonuclease type III
hg19_v2_chr11_-_7904464_7904511	0.00667607	FOXA2_FOXJ3	ENST00000502624.2|RP11-35J10.5|ENSG00000271758.1|RP11-35J10.5	ENST00000527565.1|RP11-35J10.5|ENSG00000271758.1|RP11-35J10.5
hg19_v2_chr8_-_93978309_93978331	0.00662124	FOXA2_FOXJ3	ENST00000517858.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000378861.5|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr1_+_18958008_18958023	0.00641028	FOXA2_FOXJ3	ENST00000420770.2|PAX7|ENSG00000009709.7|paired box 7 	ENST00000400661.3|PAX7|ENSG00000009709.7|paired box 7
hg19_v2_chr7_-_14880892_14881075	0.0063193	FOXA2_FOXJ3	ENST00000406247.3|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa 	ENST00000399322.3|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa 	ENST00000258767.5|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa
hg19_v2_chr7_+_149570049_149570057	0.0062405	FOXA2_FOXJ3	ENST00000421974.2|ATP6V0E2|ENSG00000171130.13|ATPase, H+ transporting V0 subunit e2 	ENST00000456496.2|ATP6V0E2|ENSG00000171130.13|ATPase, H+ transporting V0 subunit e2
hg19_v2_chr3_+_11267691_11267721	0.00622983	FOXA2_FOXJ3	ENST00000413416.1|HRH1|ENSG00000196639.6|histamine receptor H1
hg19_v2_chr7_+_77469439_77469497	0.00592841	FOXA2_FOXJ3	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr1_-_177939348_177939395	0.00581459	FOXA2_FOXJ3	ENST00000464631.2|SEC16B|ENSG00000120341.14|SEC16 homolog B (S. cerevisiae)
hg19_v2_chr19_+_18208603_18208614	0.00576582	FOXA2_FOXJ3	ENST00000262811.6|MAST3|ENSG00000099308.6|microtubule associated serine/threonine kinase 3
hg19_v2_chr12_+_48516357_48516436	0.00566895	FOXA2_FOXJ3	ENST00000549022.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle 	ENST00000547587.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle 	ENST00000312352.7|PFKM|ENSG00000152556.11|phosphofructokinase, muscle
hg19_v2_chr3_-_156272872_156272923	0.00537955	FOXA2_FOXJ3	ENST00000476217.1|SSR3|ENSG00000114850.2|signal sequence receptor, gamma (translocon-associated protein gamma)
hg19_v2_chr19_-_10311868_10311875	0.00523014	FOXA2_FOXJ3	ENST00000588118.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1 	ENST00000586800.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1
hg19_v2_chr8_+_66933779_66933800	0.00514939	FOXA2_FOXJ3	ENST00000276570.5|DNAJC5B|ENSG00000147570.5|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
hg19_v2_chr19_+_41768561_41768586	0.00509981	FOXA2_FOXJ3	ENST00000599719.1|HNRNPUL1|ENSG00000105323.12|heterogeneous nuclear ribonucleoprotein U-like 1 	ENST00000601309.1|HNRNPUL1|ENSG00000105323.12|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v2_chr9_+_127962841_127962855	0.00502895	FOXA2_FOXJ3	ENST00000394124.4|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs
hg19_v2_chr20_-_44993012_44993085	0.00497803	FOXA2_FOXJ3	ENST00000372229.1|SLC35C2|ENSG00000080189.10|solute carrier family 35 (GDP-fucose transporter), member C2 	ENST00000372230.5|SLC35C2|ENSG00000080189.10|solute carrier family 35 (GDP-fucose transporter), member C2 	ENST00000543605.1|SLC35C2|ENSG00000080189.10|solute carrier family 35 (GDP-fucose transporter), member C2 	ENST00000243896.2|SLC35C2|ENSG00000080189.10|solute carrier family 35 (GDP-fucose transporter), member C2 	ENST00000317734.8|SLC35C2|ENSG00000080189.10|solute carrier family 35 (GDP-fucose transporter), member C2
hg19_v2_chr1_+_52082751_52082781	0.00490133	FOXA2_FOXJ3	ENST00000447887.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000435686.2|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000428468.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000453295.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9
hg19_v2_chr14_+_58894141_58894155	0.00489054	FOXA2_FOXJ3	ENST00000423743.3|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr11_+_844406_844448	0.00479122	FOXA2_FOXJ3	ENST00000397404.1|TSPAN4|ENSG00000214063.6|tetraspanin 4
hg19_v2_chr4_+_146403912_146403972	0.00477458	FOXA2_FOXJ3	ENST00000507367.1|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000394092.2|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000515385.1|SMAD1|ENSG00000170365.5|SMAD family member 1
hg19_v2_chr9_-_140196703_140196744	0.00460797	FOXA2_FOXJ3	ENST00000356628.2|NRARP|ENSG00000198435.2|NOTCH-regulated ankyrin repeat protein
hg19_v2_chr3_+_119298429_119298454	0.00440261	FOXA2_FOXJ3	ENST00000478927.1|ADPRH|ENSG00000144843.7|ADP-ribosylarginine hydrolase
hg19_v2_chr4_-_153332886_153333030	0.00435726	FOXA2_FOXJ3	ENST00000603841.1|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chrX_+_134975753_134975785	0.00426737	FOXA2_FOXJ3	ENST00000535938.1|SAGE1|ENSG00000181433.5|sarcoma antigen 1
hg19_v2_chr9_+_127962795_127962834	0.00414885	FOXA2_FOXJ3	ENST00000394125.4|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs 	ENST00000259460.8|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs 	ENST00000373544.1|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs
hg19_v2_chr12_+_56435637_56435745	0.00408515	FOXA2_FOXJ3	ENST00000356464.5|RPS26|ENSG00000197728.5|ribosomal protein S26 	ENST00000552361.1|RPS26|ENSG00000197728.5|ribosomal protein S26
hg19_v2_chr1_-_243417762_243417788	0.00392927	FOXA2_FOXJ3	ENST00000522191.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr1_+_174846570_174846584	0.00390707	FOXA2_FOXJ3	ENST00000392064.2|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr15_-_76352069_76352145	0.00376529	FOXA2_FOXJ3	ENST00000305435.10|NRG4|ENSG00000169752.12|neuregulin 4 	ENST00000563910.1|NRG4|ENSG00000169752.12|neuregulin 4
hg19_v2_chr17_+_26662679_26662720	0.00373453	FOXA2_FOXJ3	ENST00000578158.1|TNFAIP1|ENSG00000109079.5|tumor necrosis factor, alpha-induced protein 1 (endothelial)
hg19_v2_chr14_+_37126765_37126799	0.00370585	FOXA2_FOXJ3	ENST00000402703.2|PAX9|ENSG00000198807.8|paired box 9
hg19_v2_chr7_-_105221898_105221948	0.00369314	FOXA2_FOXJ3	ENST00000486180.1|EFCAB10|ENSG00000185055.6|EF-hand calcium binding domain 10 	ENST00000485614.1|EFCAB10|ENSG00000185055.6|EF-hand calcium binding domain 10 	ENST00000480514.1|EFCAB10|ENSG00000185055.6|EF-hand calcium binding domain 10
hg19_v2_chr3_-_64009658_64009687	0.00369276	FOXA2_FOXJ3	ENST00000394431.2|PSMD6|ENSG00000163636.6|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
hg19_v2_chr10_-_46089939_46089980	0.00364246	FOXA2_FOXJ3	ENST00000453980.3|MARCH8|ENSG00000165406.11|membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
hg19_v2_chrX_-_77150985_77151090	0.00362004	FOXA2_FOXJ3	ENST00000358075.6|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr18_+_3449330_3449411	0.00360929	FOXA2_FOXJ3	ENST00000549253.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr9_-_104198042_104198105	0.00352185	FOXA2_FOXJ3	ENST00000374855.4|ALDOB|ENSG00000136872.13|aldolase B, fructose-bisphosphate
hg19_v2_chr11_-_72070206_72070250	0.00346133	FOXA2_FOXJ3	ENST00000544382.1|CLPB|ENSG00000162129.8|ClpB caseinolytic peptidase B homolog (E. coli)
hg19_v2_chr16_-_30064244_30064299	0.00327027	FOXA2_FOXJ3	ENST00000571269.1|FAM57B|ENSG00000149926.9|family with sequence similarity 57, member B 	ENST00000561666.1|FAM57B|ENSG00000149926.9|family with sequence similarity 57, member B
hg19_v2_chr2_+_171640291_171640311	0.00315581	FOXA2_FOXJ3	ENST00000409885.1|ERICH2|ENSG00000204334.7|glutamate-rich 2
hg19_v2_chr14_-_60632162_60632211	0.0029102	FOXA2_FOXJ3	ENST00000557185.1|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7
hg19_v2_chr8_-_93978346_93978355	0.00282922	FOXA2_FOXJ3	ENST00000523580.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr2_-_113191096_113191222	0.00279445	FOXA2_FOXJ3	ENST00000496537.1|RGPD8|ENSG00000169629.7|RANBP2-like and GRIP domain containing 8 	ENST00000330575.5|RGPD8|ENSG00000169629.7|RANBP2-like and GRIP domain containing 8 	ENST00000302558.3|RGPD8|ENSG00000169629.7|RANBP2-like and GRIP domain containing 8
hg19_v2_chr8_+_27632083_27632186	0.00265495	FOXA2_FOXJ3	ENST00000519637.1|ESCO2|ENSG00000171320.10|establishment of sister chromatid cohesion N-acetyltransferase 2
hg19_v2_chr20_+_48429233_48429257	0.00243912	FOXA2_FOXJ3	ENST00000417961.1|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8
hg19_v2_chr4_+_74576019_74576088	0.00224804	FOXA2_FOXJ3	ENST00000436089.1|AC112518.3|ENSG00000228277.1|AC112518.3
hg19_v2_chr19_+_14491948_14492014	0.0022457	FOXA2_FOXJ3	ENST00000358600.3|CD97|ENSG00000123146.15|CD97 molecule
hg19_v2_chr2_-_179516225_179516249	0.00224519	FOXA2_FOXJ3	ENST00000446966.1|TTN|ENSG00000155657.19|titin 	ENST00000426232.1|TTN|ENSG00000155657.19|titin
hg19_v2_chr2_-_220174166_220174370	0.00217825	FOXA2_FOXJ3	ENST00000409251.3|PTPRN|ENSG00000054356.9|protein tyrosine phosphatase, receptor type, N 	ENST00000451506.1|PTPRN|ENSG00000054356.9|protein tyrosine phosphatase, receptor type, N 	ENST00000295718.2|PTPRN|ENSG00000054356.9|protein tyrosine phosphatase, receptor type, N 	ENST00000446182.1|PTPRN|ENSG00000054356.9|protein tyrosine phosphatase, receptor type, N
hg19_v2_chr11_+_22696314_22696332	0.00212255	FOXA2_FOXJ3	ENST00000532398.1|GAS2|ENSG00000148935.6|growth arrest-specific 2 	ENST00000433790.1|GAS2|ENSG00000148935.6|growth arrest-specific 2
hg19_v2_chr9_-_116163400_116163613	0.00193493	FOXA2_FOXJ3	ENST00000277315.5|ALAD|ENSG00000148218.11|aminolevulinate dehydratase 	ENST00000448137.1|ALAD|ENSG00000148218.11|aminolevulinate dehydratase 	ENST00000409155.3|ALAD|ENSG00000148218.11|aminolevulinate dehydratase
hg19_v2_chr1_-_203274418_203274461	0.00167581	FOXA2_FOXJ3	ENST00000457348.1|RP11-134P9.1|ENSG00000233791.1|long intergenic non-protein coding RNA 1136
hg19_v2_chr2_+_172309634_172309643	0.00160869	FOXA2_FOXJ3	ENST00000339506.3|DCAF17|ENSG00000115827.9|DDB1 and CUL4 associated factor 17
hg19_v2_chrX_+_198129_198173	0.00160665	FOXA2_FOXJ3	ENST00000381663.3|PLCXD1|ENSG00000182378.8|phosphatidylinositol-specific phospholipase C, X domain containing 1
hg19_v2_chr4_-_111119804_111119832	0.00142157	FOXA2_FOXJ3	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr1_+_33439268_33439268	0.00138425	FOXA2_FOXJ3	ENST00000594612.1|FKSG48|ENSG00000267885.1|FKSG48
hg19_v2_chr6_+_168399772_168399772	0.00134955	FOXA2_FOXJ3	ENST00000443060.2|KIF25|ENSG00000125337.12|kinesin family member 25
hg19_v2_chr12_-_15374328_15374342	0.00131815	FOXA2_FOXJ3	ENST00000537647.1|RERG|ENSG00000134533.2|RAS-like, estrogen-regulated, growth inhibitor
hg19_v2_chr16_-_745946_746025	0.00115756	FOXA2_FOXJ3	ENST00000562563.1|FBXL16|ENSG00000127585.7|F-box and leucine-rich repeat protein 16
hg19_v2_chr8_-_72459885_72459896	0.00110437	FOXA2_FOXJ3	ENST00000523987.1|RP11-1102P16.1|ENSG00000253379.1|Uncharacterized protein
hg19_v2_chr16_-_21877629_21877629	0.00100221	FOXA2_FOXJ3	ENST00000544693.1|NPIPB4|ENSG00000185864.12|nuclear pore complex interacting protein family, member B4
hg19_v2_chr16_-_67597789_67597861	0.00095395	FOXA2_FOXJ3	ENST00000605277.1|CTD-2012K14.6|ENSG00000261386.2|CTD-2012K14.6
hg19_v2_chr15_+_49462434_49462488	0.000779681	FOXA2_FOXJ3	ENST00000558145.1|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000543495.1|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000544523.1|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000560138.1|GALK2|ENSG00000156958.10|galactokinase 2
hg19_v2_chr2_-_25564750_25564807	0.0007381	FOXA2_FOXJ3	ENST00000321117.5|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr9_+_131904295_131904314	0.000716895	FOXA2_FOXJ3	ENST00000434095.1|PPP2R4|ENSG00000119383.15|protein phosphatase 2A activator, regulatory subunit 4
hg19_v2_chr5_-_36301984_36302010	0.000645422	FOXA2_FOXJ3	ENST00000502994.1|RANBP3L|ENSG00000164188.4|RAN binding protein 3-like 	ENST00000515759.1|RANBP3L|ENSG00000164188.4|RAN binding protein 3-like 	ENST00000296604.3|RANBP3L|ENSG00000164188.4|RAN binding protein 3-like
hg19_v2_chr14_+_58894706_58894720	0.000640692	FOXA2_FOXJ3	ENST00000261244.5|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr15_+_78857870_78857913	0.000525102	FOXA2_FOXJ3	ENST00000559554.1|CHRNA5|ENSG00000169684.9|cholinergic receptor, nicotinic, alpha 5 (neuronal)
hg19_v2_chr13_-_99630233_99630348	0.000423211	FOXA2_FOXJ3	ENST00000376460.1|DOCK9|ENSG00000088387.13|dedicator of cytokinesis 9 	ENST00000442173.1|DOCK9|ENSG00000088387.13|dedicator of cytokinesis 9
hg19_v2_chr12_+_47610315_47610386	0.000328531	FOXA2_FOXJ3	ENST00000548348.1|PCED1B|ENSG00000179715.8|PC-esterase domain containing 1B 	ENST00000549500.1|PCED1B|ENSG00000179715.8|PC-esterase domain containing 1B
hg19_v2_chr14_+_102276132_102276178	0.000303608	FOXA2_FOXJ3	ENST00000350249.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557621.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556946.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr22_-_25170444_25170444	0.000250706	FOXA2_FOXJ3	ENST00000533313.1|PIWIL3|ENSG00000184571.9|piwi-like RNA-mediated gene silencing 3 	ENST00000527701.1|PIWIL3|ENSG00000184571.9|piwi-like RNA-mediated gene silencing 3
hg19_v2_chr13_+_52598827_52598827	0.000234799	FOXA2_FOXJ3	ENST00000521776.2|UTP14C|ENSG00000253797.2|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)
hg19_v2_chr4_+_184826418_184826522	0.000233017	FOXA2_FOXJ3	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
